View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3550_low_33 (Length: 254)
Name: NF3550_low_33
Description: NF3550
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3550_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 45220613 - 45220398
Alignment:
| Q |
23 |
aatctttaactgtaataatcttcaattctgtagttgacttatgcttaattagctcacttgttaattttacttaattttaattaactatggctgtgtcggt |
122 |
Q |
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| T |
45220613 |
aatctttaactgtaataatcttcaattctgtagttaacttatgcttaattagctcacttgttcattttacttaattttaattaactatggctgtgtcggt |
45220514 |
T |
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| Q |
123 |
atactcttacttgatctataggtaacaagaacagagtatgtgtaattagttgtacttctttgtaattaagtttgcgaatcgtgtgattatggaagctttt |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45220513 |
atactcttacttgatctataggtaacaagaacagagtatgtgtaattagttgtacttctttgtaattaagtttgcgaatcgtgtgattatggaagctttt |
45220414 |
T |
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| Q |
223 |
caattgtacggtaatg |
238 |
Q |
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|||||||||||||||| |
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| T |
45220413 |
caattgtacggtaatg |
45220398 |
T |
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