View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3554_high_26 (Length: 326)

Name: NF3554_high_26
Description: NF3554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3554_high_26
NF3554_high_26
[»] chr4 (37 HSPs)
chr4 (156-255)||(48870400-48870499)
chr4 (156-255)||(48886086-48886185)
chr4 (156-249)||(48875704-48875797)
chr4 (156-253)||(50250910-50251007)
chr4 (132-251)||(45372191-45372310)
chr4 (209-322)||(48898630-48898746)
chr4 (164-253)||(48170700-48170789)
chr4 (276-326)||(48147752-48147802)
chr4 (274-324)||(48735419-48735469)
chr4 (211-253)||(48852576-48852618)
chr4 (159-253)||(49044316-49044410)
chr4 (156-253)||(37827114-37827211)
chr4 (163-253)||(48705479-48705571)
chr4 (157-253)||(48891271-48891367)
chr4 (195-250)||(48863126-48863181)
chr4 (277-324)||(50250818-50250865)
chr4 (208-324)||(49041201-49041320)
chr4 (278-326)||(7877727-7877775)
chr4 (272-324)||(45384905-45384957)
chr4 (272-320)||(48902924-48902972)
chr4 (198-253)||(33133934-33133989)
chr4 (212-251)||(50672412-50672451)
chr4 (280-326)||(7908325-7908371)
chr4 (164-249)||(47207762-47207847)
chr4 (272-324)||(48705396-48705448)
chr4 (277-321)||(49048613-49048657)
chr4 (157-253)||(50668911-50669007)
chr4 (278-321)||(7237763-7237806)
chr4 (278-321)||(7771396-7771439)
chr4 (278-321)||(7790081-7790124)
chr4 (277-322)||(48852663-48852708)
chr4 (277-322)||(48870539-48870584)
chr4 (277-322)||(48875843-48875888)
chr4 (277-322)||(48886225-48886270)
chr4 (208-253)||(49048704-49048749)
chr4 (277-326)||(50669052-50669101)
chr4 (272-324)||(45366243-45366295)
[»] chr5 (7 HSPs)
chr5 (138-324)||(42562377-42562566)
chr5 (272-324)||(29696198-29696250)
chr5 (198-248)||(29688011-29688061)
chr5 (157-240)||(29712599-29712682)
chr5 (158-251)||(29696072-29696165)
chr5 (272-320)||(179026-179074)
chr5 (206-249)||(29261158-29261201)
[»] chr1 (8 HSPs)
chr1 (161-323)||(24367025-24367190)
chr1 (138-250)||(24310023-24310135)
chr1 (277-324)||(24340405-24340452)
chr1 (277-324)||(24352770-24352817)
chr1 (138-189)||(24322308-24322359)
chr1 (277-324)||(24369477-24369524)
chr1 (272-322)||(24310163-24310213)
chr1 (143-236)||(24365193-24365286)
[»] chr6 (4 HSPs)
chr6 (159-253)||(21015667-21015761)
chr6 (157-253)||(21979770-21979866)
chr6 (277-320)||(21015806-21015849)
chr6 (277-321)||(21979678-21979722)
[»] chr3 (5 HSPs)
chr3 (156-252)||(47452028-47452124)
chr3 (156-251)||(11015641-11015736)
chr3 (277-320)||(11005994-11006037)
chr3 (277-320)||(11024569-11024612)
chr3 (277-320)||(11015557-11015600)
[»] chr8 (6 HSPs)
chr8 (156-253)||(15348720-15348817)
chr8 (272-324)||(4031938-4031990)
chr8 (272-322)||(15348848-15348898)
chr8 (277-322)||(12200304-12200349)
chr8 (277-322)||(12444732-12444777)
chr8 (211-251)||(4032032-4032072)
[»] chr7 (2 HSPs)
chr7 (156-253)||(48883656-48883753)
chr7 (206-249)||(30120435-30120478)
[»] scaffold0508 (1 HSPs)
scaffold0508 (138-191)||(12156-12209)


Alignment Details
Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 255
Target Start/End: Original strand, 48870400 - 48870499
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgtgt 255  Q
    ||||||||||||||||||||| |||||||| ||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48870400 aattaaaggttcatgtagaggctttatattattgcattgtgctccaaccctctacctatggaatccatccaccggatttcacaaacaaatacctttgtgt 48870499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 156 - 255
Target Start/End: Original strand, 48886086 - 48886185
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgtgt 255  Q
    ||||||||||||||||||||| |||||||| ||||||| |||| ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  48886086 aattaaaggttcatgtagaggctttatattattgcattgtgctccaaccctctacctatggaatccatccaccggatttcacaaacaaatacctttgtgt 48886185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 156 - 249
Target Start/End: Original strand, 48875704 - 48875797
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacct 249  Q
    |||||||||||| || ||||| |||||| ||||||||| |  |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  48875704 aattaaaggttcttgcagaggctttatactgttgcattgtttttcaagcctctacctatggaatccatccaccggatttcacaaacaaatacct 48875797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 50251007 - 50250910
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    ||||||||||||||||||||| |||||||| || || | |  |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  50251007 aattaaaggttcatgtagaggatttatatttttccactgtttttcaagcctctacctatggaatccatccaccgggcttcacatacaaatacctttgt 50250910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 45372310 - 45372191
Alignment:
Q  132 tcccctatcttatttagatcttagaattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccgga 231  Q
    ||||| |||| |||| ||||||  |||||||||||||||||||||||||||||| ||||||  |  ||||| | |||| ||||||||||||||||| ||     
T  45372310 tccccaatctcattttgatcttgaaattaaaggttcatgtagagggtttatatttttgcatggtaattcaaccttctatctatggaatccatccactggt 45372211  T
Q  232 gttcacaaacaaataccttt 251  Q
    ||||| ||||||||||||||    
T  45372210 gttcagaaacaaataccttt 45372191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 209 - 322
Target Start/End: Original strand, 48898630 - 48898746
Alignment:
Q  209 acctatggaatccatccaccggagttcacaaacaaatacctttgtgttcca---attcatataaacatttctatggttttgggtatgaccactcaacaga 305  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | | |   |||  | |  | |||||||||||||||||||||| || | ||||||    
T  48898630 acctatggaatccatccaccggagctcacaaacaaatacctttgtctcctaatcatttttctttatatttctatggttttgggtatgatcagttaacaga 48898729  T
Q  306 tgattacttggtggttt 322  Q
    ||||||||| |||||||    
T  48898730 tgattacttagtggttt 48898746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 164 - 253
Target Start/End: Complemental strand, 48170789 - 48170700
Alignment:
Q  164 gttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||| |||||||| |||||||| ||||||  |  ||||||  ||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  48170789 gttcctgtagaggctttatatttttgcatcataattcaagtttctacctatggaatccatccacccgagttcataaacaaatacctttgt 48170700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 326
Target Start/End: Complemental strand, 48147802 - 48147752
Alignment:
Q  276 ctatggttttgggtatgaccactcaacagatgattacttggtggtttcatt 326  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  48147802 ctatggttttgggtatgaccagttaacagatgattacttggtggtttcatt 48147752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 48735469 - 48735419
Alignment:
Q  274 ttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  48735469 ttctatggttttgggtatgaccatttaacagatgattacttggtggtttca 48735419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 48852576 - 48852618
Alignment:
Q  211 ctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48852576 ctatggaatccatccaccggagttcacaaacaaatacctttgt 48852618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 159 - 253
Target Start/End: Complemental strand, 49044410 - 49044316
Alignment:
Q  159 taaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||| |||||||||||||||||||||| ||||||  |||| |||     || |||||||||||||||||  ||||||||||||||||||||||||    
T  49044410 taaatgttcatgtagagggtttatatttttgcatcgtgctgcaacaacttatctatggaatccatccactagagttcacaaacaaatacctttgt 49044316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 156 - 253
Target Start/End: Complemental strand, 37827211 - 37827114
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    ||||||||||||| ||||||||||| |||| |||||   | ||| || | ||||| |||||||||||||||| ||| |||||||||||||||| ||||    
T  37827211 aattaaaggttcaggtagagggtttgtatttttgcaccgttctttaaacatctacatatggaatccatccactggatttcacaaacaaatacccttgt 37827114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 48705571 - 48705479
Alignment:
Q  163 ggttcatgtagagggtttatattgttgcattctgcttcaagcctct--acctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||| ||| ||||| ||||||||||| |||| |||||||| |||||  |||| ||||||||||| || ||| |||||||||||||||||||||    
T  48705571 ggttaatgcagaggttttatattgtttcattgtgcttcaaccctctctacctgtggaatccatctactggatttcacaaacaaatacctttgt 48705479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 48891271 - 48891367
Alignment:
Q  157 attaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    ||||||| |||||||||||||||| || | |||||| ||   |||| | ||||  |||||||||||||||| ||| |||||||||||||||||||||    
T  48891271 attaaagcttcatgtagagggtttgtacttttgcatactaactcaaacatctatgtatggaatccatccactggacttcacaaacaaatacctttgt 48891367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 48863126 - 48863181
Alignment:
Q  195 tgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctt 250  Q
    |||||||| | ||||||||||||||||||||||||||| ||| |||||||||||||    
T  48863126 tgcttcaaacatctacctatggaatccatccaccggagctcagaaacaaatacctt 48863181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 277 - 324
Target Start/End: Complemental strand, 50250865 - 50250818
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  50250865 tatggttttggttatgaccactcaacagatgattatttggtggtttca 50250818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 208 - 324
Target Start/End: Complemental strand, 49041320 - 49041201
Alignment:
Q  208 tacctatggaatccatccaccggagttcacaaacaaatacctttgtgttccaattcat-ataa---acatttctatggttttgggtatgaccactcaaca 303  Q
    ||||||||||| ||||||||||||| |||||||| ||||||||||  | | ||| ||| || |   | |||||||||||||||||||||| |  ||||||    
T  49041320 tacctatggaacccatccaccggagctcacaaactaatacctttgcctcctaat-catgattacttaaatttctatggttttgggtatgatccgtcaaca 49041222  T
Q  304 gatgattacttggtggtttca 324  Q
    |||||||||||| ||||||||    
T  49041221 gatgattacttgatggtttca 49041201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 7877727 - 7877775
Alignment:
Q  278 atggttttgggtatgaccactcaacagatgattacttggtggtttcatt 326  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||    
T  7877727 atggttttggttatgaccaatcaagagatgattacttggtggtttcatt 7877775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 45384957 - 45384905
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    |||||||||||||||||||||| || |||||| ||||||| ||||||||||||    
T  45384957 atttctatggttttgggtatgatcagtcaacaaatgattatttggtggtttca 45384905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 48902924 - 48902972
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggt 320  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| ||||    
T  48902924 atttttatggttttgggtatgaccactcaagagatgattacttgatggt 48902972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 253
Target Start/End: Complemental strand, 33133989 - 33133934
Alignment:
Q  198 ttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    ||||||| || ||||||||||||||| |||| ||||||| ||||||||||||||||    
T  33133989 ttcaagcttccacctatggaatccattcacccgagttcataaacaaatacctttgt 33133934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 50672412 - 50672451
Alignment:
Q  212 tatggaatccatccaccggagttcacaaacaaataccttt 251  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  50672412 tatggaatccatccacaggagttcacaaacaaataccttt 50672451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 326
Target Start/End: Original strand, 7908325 - 7908371
Alignment:
Q  280 ggttttgggtatgaccactcaacagatgattacttggtggtttcatt 326  Q
    |||||||| |||||||| |||| ||||||||||||||||||||||||    
T  7908325 ggttttggttatgaccagtcaagagatgattacttggtggtttcatt 7908371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 47207762 - 47207847
Alignment:
Q  164 gttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacct 249  Q
    ||||||||||||| |||||||| ||||||     |||||||  ||||||||||||||||||||| |||||| | | ||||||||||    
T  47207762 gttcatgtagaggctttatatttttgcatcgactttcaagctactacctatggaatccatccactggagttgagagacaaatacct 47207847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 48705448 - 48705396
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    ||||| |||||||||| ||||| || |||||||||||||||||||| ||||||    
T  48705448 atttccatggttttggatatgatcagtcaacagatgattacttggttgtttca 48705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 49048657 - 49048613
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtt 321  Q
    |||||||||||||||||||  |||||||||||||| |||||||||    
T  49048657 tatggttttgggtatgacccatcaacagatgattatttggtggtt 49048613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 253
Target Start/End: Original strand, 50668911 - 50669007
Alignment:
Q  157 attaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||| |||||| |||||||| |||||||| ||||||| | |||| | | ||| | ||||||||||||||||| || |||| ||||| ||||| ||||    
T  50668911 attagaggttcgtgtagaggctttatatttttgcattgttcttccaacatctgcatatggaatccatccaccagatttcataaacagataccattgt 50669007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Complemental strand, 7237806 - 7237763
Alignment:
Q  278 atggttttgggtatgaccactcaacagatgattacttggtggtt 321  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  7237806 atggttttggttatgaccagtcaagagatgattacttggtggtt 7237763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 7771396 - 7771439
Alignment:
Q  278 atggttttgggtatgaccactcaacagatgattacttggtggtt 321  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  7771396 atggttttggttatgaccagtcaagagatgattacttggtggtt 7771439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 321
Target Start/End: Original strand, 7790081 - 7790124
Alignment:
Q  278 atggttttgggtatgaccactcaacagatgattacttggtggtt 321  Q
    |||||||||| |||||||| |||| |||||||||||||||||||    
T  7790081 atggttttggttatgaccagtcaagagatgattacttggtggtt 7790124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 48852663 - 48852708
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    |||||||||||||||||||  ||||| |||||||||||||| ||||    
T  48852663 tatggttttgggtatgacccgtcaaccgatgattacttggtagttt 48852708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 48870539 - 48870584
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    ||||||||||||||||| || | ||||||||||||||| |||||||    
T  48870539 tatggttttgggtatgatcagttaacagatgattacttagtggttt 48870584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 48875843 - 48875888
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    ||||||||||||||||| || | | |||||||||||||||||||||    
T  48875843 tatggttttgggtatgatcagttagcagatgattacttggtggttt 48875888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 48886225 - 48886270
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    ||||||||||||||||| || | ||||||||||||||| |||||||    
T  48886225 tatggttttgggtatgatcagttaacagatgattacttagtggttt 48886270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Complemental strand, 49048749 - 49048704
Alignment:
Q  208 tacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    ||||| ||||||||||||||  ||||||||| ||||||||||||||    
T  49048749 tacctttggaatccatccactagagttcacagacaaatacctttgt 49048704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 326
Target Start/End: Original strand, 50669052 - 50669101
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtttcatt 326  Q
    ||||||||||| |||||||  |||| ||||||||||||||| ||||||||    
T  50669052 tatggttttggttatgaccggtcaagagatgattacttggttgtttcatt 50669101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 45366295 - 45366243
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    |||||||||||||| |||||||||  | |||||||||||| ||||| ||||||    
T  45366295 atttctatggtttttggtatgacccattaacagatgattatttggttgtttca 45366243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 4e-26; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 138 - 324
Target Start/End: Complemental strand, 42562566 - 42562377
Alignment:
Q  138 atcttatttagatcttagaattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcac 237  Q
    ||||||||| ||| || ||||||||||||| ||||||||||||||| | ||||||| || | || || ||||||||||||||||||||| ||||  ||||    
T  42562566 atcttatttcgatattggaattaaaggttcgtgtagagggtttatacttttgcattgtggtgcatgcttctacctatggaatccatccatcggacatcac 42562467  T
Q  238 aaacaaatacctttgtgttccaattca-tata---aacatttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    ||||||||||||||||  ||| ||| | ||||      |||| ||||||||||||||||| ||||||||| ||||||| || |||||||||    
T  42562466 aaacaaatacctttgt-ctcctattgattatatttttaatttatatggttttgggtatgatcactcaacaaatgattatttagtggtttca 42562377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 272 - 324
Target Start/End: Original strand, 29696198 - 29696250
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    ||||||||||||||||||||||| | ||||||||||||||||||||| |||||    
T  29696198 atttctatggttttgggtatgacgagtcaacagatgattacttggtgatttca 29696250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 29688011 - 29688061
Alignment:
Q  198 ttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacc 248  Q
    ||||||||| || |||||||||||||||||||||||||||| |||||||||    
T  29688011 ttcaagcctttatctatggaatccatccaccggagttcacagacaaatacc 29688061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 29712682 - 29712599
Alignment:
Q  157 attaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaa 240  Q
    ||||||||||| ||||||||||||||| | |||  || || |||| | ||||  ||||||||||||||||| ||||||||||||    
T  29712682 attaaaggttcgtgtagagggtttatacttttgagttgtggttcatgtctctgtctatggaatccatccactggagttcacaaa 29712599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 158 - 251
Target Start/End: Original strand, 29696072 - 29696165
Alignment:
Q  158 ttaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaataccttt 251  Q
    |||||||||| |||||||| |||||| | ||| | | |   ||||||||||   |||||||||||||||||||| ||||||||| |||||||||    
T  29696072 ttaaaggttcgtgtagaggctttatacttttgaactgttactcaagcctctgtatatggaatccatccaccggatttcacaaacgaataccttt 29696165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 320
Target Start/End: Original strand, 179026 - 179074
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggt 320  Q
    ||||||||||||||||||||||  | |||||||||||||||||| ||||    
T  179026 atttctatggttttgggtatgaggagtcaacagatgattacttgttggt 179074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 206 - 249
Target Start/End: Original strand, 29261158 - 29261201
Alignment:
Q  206 tctacctatggaatccatccaccggagttcacaaacaaatacct 249  Q
    |||| |||||||||||||| |||||||| |||||||||||||||    
T  29261158 tctatctatggaatccatcaaccggagtccacaaacaaatacct 29261201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 161 - 323
Target Start/End: Original strand, 24367025 - 24367190
Alignment:
Q  161 aaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgtgttcca- 259  Q
    ||||||||||| ||||||||||||||||||| ||| |||||| | | ||||||||||| ||||||||| ||||||| |  ||| ||||||||  |   |     
T  24367025 aaggttcatgtcgagggtttatattgttgcactcttcttcaaacatttacctatggaacccatccaccagagttcataggcaattacctttgcctcttaa 24367124  T
Q  260 --attcatataaacatttctatggttttgggtatgaccactcaacagatgattacttggtggtttc 323  Q
      ||| ||||  | ||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  24367125 tcatttatatgcagatttctatggttttgggtatgacaagtcaacagatgattacttggtggtttc 24367190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 138 - 250
Target Start/End: Original strand, 24310023 - 24310135
Alignment:
Q  138 atcttatttagatcttagaattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcac 237  Q
    |||| |||| ||||||| | ||| ||||||||||||||| |||||||||||| | | |  ||||| | | ||| |||||||||||||||||||||||||     
T  24310023 atctcattttgatcttaaagttataggttcatgtagaggttttatattgttggagtgtttttcaaacatttacgtatggaatccatccaccggagttcat 24310122  T
Q  238 aaacaaatacctt 250  Q
    | |||||||||||    
T  24310123 agacaaatacctt 24310135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 24340405 - 24340452
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  24340405 tatggttttgggtatgacgaatcaacatatgattacttggtggtttca 24340452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 24352770 - 24352817
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||    
T  24352770 tatggttttgggtatgacgaatcaacatatgattacttggtggtttca 24352817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 138 - 189
Target Start/End: Original strand, 24322308 - 24322359
Alignment:
Q  138 atcttatttagatcttagaattaaaggttcatgtagagggtttatattgttg 189  Q
    ||||||||| ||||||| | ||| ||||||||||||||||| ||||||||||    
T  24322308 atcttattttgatcttaaagttagaggttcatgtagagggtatatattgttg 24322359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 324
Target Start/End: Original strand, 24369477 - 24369524
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    ||||||||||| |||||| | ||||||||||||||| |||||||||||    
T  24369477 tatggttttggctatgacgagtcaacagatgattacctggtggtttca 24369524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 24310163 - 24310213
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    |||||||||||||||| |||||| | |||| ||||||||||||||| ||||    
T  24310163 atttctatggttttggttatgacgagtcaagagatgattacttggtagttt 24310213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 236
Target Start/End: Original strand, 24365193 - 24365286
Alignment:
Q  143 atttagatcttagaattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttca 236  Q
    |||| ||||||| ||||| |||||||||||||||||| ||||| ||| | |||  | ||| | | || ||||||||||||||||  ||||||||    
T  24365193 attttgatcttaaaattataggttcatgtagagggttcatatttttgtactcttatccaaacttttagctatggaatccatccaatggagttca 24365286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 1e-22; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 21015667 - 21015761
Alignment:
Q  159 taaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||| |||||||||||||||||||||| |||||   || ||||| | ||||||||||||||||||||||  ||||||||||||||||||||||||    
T  21015667 taaatgttcatgtagagggtttatatttttgcaccatgattcaaacatctacctatggaatccatccactagagttcacaaacaaatacctttgt 21015761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 157 - 253
Target Start/End: Complemental strand, 21979866 - 21979770
Alignment:
Q  157 attaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||||||||||||||||||| |||||||| || || | |  |||||| |||||| ||||||| || || || ||| |||| ||||||||||||||||    
T  21979866 attaaaggttcatgtagaggatttatatttttccactgtttttcaagactctacatatggaacccgtctactggacttcaaaaacaaatacctttgt 21979770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 320
Target Start/End: Original strand, 21015806 - 21015849
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggt 320  Q
    |||||||||||||||||||  |||||||||||||| ||||||||    
T  21015806 tatggttttgggtatgacccatcaacagatgattatttggtggt 21015849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 321
Target Start/End: Complemental strand, 21979722 - 21979678
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggtt 321  Q
    ||||||||||| |||||||| |||| | |||||||||||||||||    
T  21979722 tatggttttggttatgaccagtcaagaaatgattacttggtggtt 21979678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 252
Target Start/End: Complemental strand, 47452124 - 47452028
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttg 252  Q
    |||||||||||||||||||||||||||| | ||   || | |||||| | ||||| |||||||||||||||| ||||||||||||||||||||||||    
T  47452124 aattaaaggttcatgtagagggtttatacttttaagttgttcttcaaacatctacatatggaatccatccactggagttcacaaacaaatacctttg 47452028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 156 - 251
Target Start/End: Complemental strand, 11015736 - 11015641
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaataccttt 251  Q
    ||||||| ||||||||||||| |||||| | |||  || | |||||| | ||||||||||||||||||| || |||  ||||||||||||||||||    
T  11015736 aattaaaagttcatgtagaggatttatagttttgacttgttcttcaaacatctacctatggaatccatcaactggacatcacaaacaaataccttt 11015641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 11006037 - 11005994
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggt 320  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  11006037 tatggttttgggtatgaccattcaagagatgattacttggtggt 11005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 11024612 - 11024569
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggt 320  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  11024612 tatggttttgggtatgaccattcaagagatgattacttggtggt 11024569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 277 - 320
Target Start/End: Complemental strand, 11015600 - 11015557
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggt 320  Q
    |||||||||||||||||||| | || ||||||||||||||||||    
T  11015600 tatggttttgggtatgaccatttaagagatgattacttggtggt 11015557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 15348720 - 15348817
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    ||||||||||||||||||||| ||| || | ||| | | |  ||||| |||||| ||||||||||||||||||||| |||||| | || |||||||||    
T  15348720 aattaaaggttcatgtagaggctttgtacttttgaactattattcaatcctctatctatggaatccatccaccggatttcacagaaaagtacctttgt 15348817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 4031990 - 4031938
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggtttca 324  Q
    |||| |||||||||||||||||||| |||||| |||| ||| |||||||||||    
T  4031990 atttatatggttttgggtatgaccagtcaacaaatgactacctggtggtttca 4031938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 272 - 322
Target Start/End: Original strand, 15348848 - 15348898
Alignment:
Q  272 atttctatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    |||||||| |||| ||||||||||| | || ||||||||||||||||||||    
T  15348848 atttctatagtttcgggtatgaccaattaaaagatgattacttggtggttt 15348898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 12200304 - 12200349
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    ||||||||||| |||||||  |||| ||||||||||||||||||||    
T  12200304 tatggttttggttatgaccggtcaagagatgattacttggtggttt 12200349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 322
Target Start/End: Original strand, 12444732 - 12444777
Alignment:
Q  277 tatggttttgggtatgaccactcaacagatgattacttggtggttt 322  Q
    ||||||||||| |||||||  |||| ||||||||||||||||||||    
T  12444732 tatggttttggttatgaccggtcaagagatgattacttggtggttt 12444777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 4032072 - 4032032
Alignment:
Q  211 ctatggaatccatccaccggagttcacaaacaaataccttt 251  Q
    ||||||||| ||||||  |||||||||||||||||||||||    
T  4032072 ctatggaattcatccattggagttcacaaacaaataccttt 4032032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 48883656 - 48883753
Alignment:
Q  156 aattaaaggttcatgtagagggtttatattgttgcattctgcttcaagcctctacctatggaatccatccaccggagttcacaaacaaatacctttgt 253  Q
    |||||||||||| |||||||||||| | || ||||||  | |||| | | ||| | |||||||||||| ||| ||| |||||||||||||||||||||    
T  48883656 aattaaaggttcgtgtagagggtttctgtttttgcatggttcttccaacatctgcatatggaatccatacactggatttcacaaacaaatacctttgt 48883753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 206 - 249
Target Start/End: Complemental strand, 30120478 - 30120435
Alignment:
Q  206 tctacctatggaatccatccaccggagttcacaaacaaatacct 249  Q
    |||| ||||||||||||||||||||||| |||||||||||||||    
T  30120478 tctatctatggaatccatccaccggagtccacaaacaaatacct 30120435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 12156 - 12209
Alignment:
Q  138 atcttatttagatcttagaattaaaggttcatgtagagggtttatattgttgca 191  Q
    |||| |||| ||||||  ||||||||||||||||||| |||||||||| |||||    
T  12156 atctcattttgatcttcaaattaaaggttcatgtagaaggtttatatttttgca 12209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University