View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3554_low_27 (Length: 319)

Name: NF3554_low_27
Description: NF3554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3554_low_27
NF3554_low_27
[»] chr7 (46 HSPs)
chr7 (13-303)||(34361826-34362108)
chr7 (18-183)||(29173758-29173923)
chr7 (18-182)||(6546755-6546919)
chr7 (17-187)||(17842340-17842510)
chr7 (17-182)||(37110109-37110274)
chr7 (17-182)||(37703259-37703424)
chr7 (18-182)||(8861521-8861685)
chr7 (17-182)||(26980541-26980706)
chr7 (18-182)||(30055763-30055927)
chr7 (22-182)||(15612520-15612680)
chr7 (18-180)||(24211977-24212140)
chr7 (18-182)||(31520502-31520666)
chr7 (42-182)||(26587853-26587991)
chr7 (22-159)||(37347261-37347398)
chr7 (18-182)||(5657241-5657406)
chr7 (41-182)||(4583180-4583319)
chr7 (18-179)||(9355590-9355751)
chr7 (42-182)||(35353370-35353508)
chr7 (17-167)||(46480905-46481055)
chr7 (23-168)||(18797568-18797713)
chr7 (42-170)||(31578837-31578963)
chr7 (42-182)||(7335055-7335193)
chr7 (42-182)||(12390410-12390548)
chr7 (49-164)||(25691322-25691436)
chr7 (68-182)||(38258867-38258979)
chr7 (18-150)||(22687467-22687599)
chr7 (18-181)||(32432688-32432851)
chr7 (42-182)||(10358975-10359113)
chr7 (18-124)||(11071439-11071547)
chr7 (18-181)||(27283980-27284145)
chr7 (18-170)||(37704418-37704570)
chr7 (18-170)||(10481841-10481993)
chr7 (49-170)||(15672532-15672651)
chr7 (18-111)||(12165979-12166074)
chr7 (18-170)||(44411313-44411465)
chr7 (43-179)||(23111455-23111589)
chr7 (42-146)||(43925357-43925459)
chr7 (42-182)||(48928058-48928196)
chr7 (18-150)||(32820846-32820978)
chr7 (42-182)||(41764839-41764977)
chr7 (96-182)||(21991943-21992027)
chr7 (42-154)||(32592996-32593105)
chr7 (43-182)||(44598929-44599066)
chr7 (106-182)||(12166215-12166289)
chr7 (128-182)||(33688053-33688107)
chr7 (42-86)||(33688117-33688161)
[»] chr1 (54 HSPs)
chr1 (17-182)||(48353798-48353963)
chr1 (18-182)||(37451542-37451706)
chr1 (18-182)||(2960005-2960169)
chr1 (18-172)||(7078828-7078982)
chr1 (18-182)||(34012137-34012301)
chr1 (18-182)||(27532737-27532900)
chr1 (17-167)||(11742138-11742288)
chr1 (18-182)||(32267291-32267455)
chr1 (42-181)||(39393667-39393804)
chr1 (18-182)||(47279446-47279611)
chr1 (17-182)||(46931665-46931831)
chr1 (18-172)||(27763075-27763230)
chr1 (18-182)||(14758289-14758453)
chr1 (18-182)||(32216312-32216476)
chr1 (18-145)||(3309410-3309538)
chr1 (23-182)||(10922989-10923148)
chr1 (17-182)||(23999603-23999769)
chr1 (18-172)||(38823471-38823625)
chr1 (17-182)||(47682249-47682414)
chr1 (18-187)||(1547528-1547697)
chr1 (18-182)||(3535180-3535344)
chr1 (42-159)||(28564561-28564676)
chr1 (17-159)||(28769909-28770051)
chr1 (18-179)||(9902812-9902973)
chr1 (18-182)||(19899523-19899688)
chr1 (42-181)||(30254706-30254843)
chr1 (16-182)||(31962871-31963038)
chr1 (18-183)||(8222385-8222550)
chr1 (17-180)||(15168352-15168515)
chr1 (18-182)||(15383190-15383355)
chr1 (17-159)||(51129115-51129255)
chr1 (43-182)||(22170995-22171132)
chr1 (17-123)||(27227297-27227405)
chr1 (18-150)||(238300-238432)
chr1 (42-123)||(21289883-21289964)
chr1 (19-170)||(27563672-27563823)
chr1 (17-179)||(27266959-27267120)
chr1 (18-123)||(16415903-16416010)
chr1 (49-182)||(10181762-10181893)
chr1 (18-123)||(1359747-1359854)
chr1 (58-182)||(15752328-15752450)
chr1 (69-182)||(48620906-48621010)
chr1 (49-179)||(4330571-4330699)
chr1 (18-124)||(25160889-25160998)
chr1 (42-124)||(42721319-42721401)
chr1 (42-124)||(30326762-30326845)
chr1 (18-160)||(31621325-31621468)
chr1 (42-154)||(40885096-40885207)
chr1 (69-182)||(33725366-33725478)
chr1 (42-124)||(41926440-41926521)
chr1 (42-121)||(18422934-18423006)
chr1 (42-107)||(37618729-37618794)
chr1 (136-177)||(10598223-10598264)
chr1 (130-182)||(38759859-38759911)
[»] chr2 (40 HSPs)
chr2 (17-182)||(33660155-33660320)
chr2 (42-181)||(43648024-43648161)
chr2 (43-182)||(19424420-19424557)
chr2 (18-182)||(27349731-27349890)
chr2 (17-182)||(35959156-35959317)
chr2 (18-182)||(41961101-41961265)
chr2 (18-182)||(18494059-18494223)
chr2 (17-182)||(11366158-11366324)
chr2 (18-172)||(7006726-7006880)
chr2 (42-182)||(19289101-19289239)
chr2 (42-177)||(33709015-33709148)
chr2 (17-182)||(4167182-4167347)
chr2 (184-303)||(17332862-17332979)
chr2 (42-182)||(31862139-31862277)
chr2 (18-163)||(43770645-43770790)
chr2 (18-182)||(2325156-2325320)
chr2 (19-182)||(4763893-4764057)
chr2 (18-154)||(26357838-26357974)
chr2 (42-185)||(3177226-3177367)
chr2 (43-161)||(5881817-5881933)
chr2 (21-172)||(13711723-13711874)
chr2 (43-168)||(31570526-31570649)
chr2 (18-154)||(41465762-41465898)
chr2 (19-123)||(19500750-19500856)
chr2 (42-154)||(37905997-37906108)
chr2 (22-186)||(41051077-41051238)
chr2 (18-180)||(44913925-44914090)
chr2 (56-179)||(39167150-39167271)
chr2 (43-150)||(41463400-41463505)
chr2 (57-182)||(29241923-29242046)
chr2 (96-182)||(45328031-45328114)
chr2 (43-172)||(18257326-18257453)
chr2 (22-107)||(4478630-4478717)
chr2 (58-150)||(33902317-33902407)
chr2 (19-91)||(44286211-44286285)
chr2 (43-91)||(19314135-19314183)
chr2 (41-108)||(4263926-4263993)
chr2 (128-182)||(36642307-36642361)
chr2 (49-123)||(33550818-33550896)
chr2 (111-187)||(4263682-4263756)
[»] chr4 (49 HSPs)
chr4 (18-182)||(37287989-37288154)
chr4 (18-179)||(7703770-7703931)
chr4 (18-182)||(36493475-36493639)
chr4 (18-181)||(37775919-37776082)
chr4 (42-182)||(29583986-29584124)
chr4 (43-182)||(30002427-30002564)
chr4 (18-182)||(6864296-6864460)
chr4 (42-182)||(17272251-17272389)
chr4 (17-182)||(19089239-19089404)
chr4 (18-182)||(34361277-34361442)
chr4 (43-182)||(47254028-47254165)
chr4 (18-182)||(55240891-55241055)
chr4 (42-182)||(23431842-23431980)
chr4 (17-180)||(50764980-50765143)
chr4 (42-182)||(33816302-33816440)
chr4 (17-181)||(3042879-3043043)
chr4 (41-172)||(39400294-39400423)
chr4 (42-171)||(23761358-23761485)
chr4 (17-182)||(32912365-32912531)
chr4 (42-182)||(4598269-4598407)
chr4 (42-182)||(19440434-19440572)
chr4 (42-182)||(25184400-25184538)
chr4 (20-172)||(32592347-32592499)
chr4 (18-182)||(37663527-37663691)
chr4 (18-180)||(46887946-46888108)
chr4 (18-182)||(35020817-35020985)
chr4 (17-167)||(33341658-33341808)
chr4 (18-182)||(4205245-4205409)
chr4 (49-182)||(26896381-26896513)
chr4 (17-182)||(28002772-28002937)
chr4 (17-182)||(32579706-32579871)
chr4 (17-182)||(49376227-49376392)
chr4 (18-159)||(50697503-50697644)
chr4 (17-154)||(7152018-7152155)
chr4 (17-182)||(25700842-25701007)
chr4 (19-154)||(35025381-35025515)
chr4 (18-149)||(1815562-1815693)
chr4 (18-182)||(17167974-17168138)
chr4 (18-182)||(17173551-17173715)
chr4 (23-182)||(879334-879493)
chr4 (42-123)||(55477734-55477815)
chr4 (49-172)||(27396910-27397029)
chr4 (49-150)||(46883932-46884031)
chr4 (42-140)||(34947923-34948019)
chr4 (42-182)||(42200017-42200155)
chr4 (58-182)||(5047752-5047874)
chr4 (61-182)||(38012568-38012687)
chr4 (42-169)||(9139516-9139639)
chr4 (56-154)||(4934026-4934123)
[»] chr3 (55 HSPs)
chr3 (42-182)||(4015737-4015875)
chr3 (41-182)||(21193884-21194023)
chr3 (17-182)||(33378545-33378710)
chr3 (50-182)||(36012425-36012556)
chr3 (17-181)||(39282903-39283067)
chr3 (18-179)||(33698405-33698566)
chr3 (18-182)||(46297522-46297686)
chr3 (18-180)||(42505837-42505999)
chr3 (17-182)||(22622478-22622643)
chr3 (17-182)||(37203319-37203484)
chr3 (18-182)||(26941020-26941184)
chr3 (19-182)||(29099599-29099763)
chr3 (18-182)||(40552019-40552183)
chr3 (18-182)||(21009561-21009726)
chr3 (51-182)||(37157995-37158124)
chr3 (17-180)||(47481773-47481937)
chr3 (23-182)||(48355198-48355357)
chr3 (42-182)||(14586440-14586578)
chr3 (17-182)||(52040682-52040847)
chr3 (42-172)||(1089971-1090099)
chr3 (49-187)||(3362540-3362676)
chr3 (18-154)||(11357169-11357305)
chr3 (63-180)||(20373025-20373140)
chr3 (18-172)||(54506059-54506214)
chr3 (43-164)||(44186295-44186414)
chr3 (43-168)||(44891776-44891899)
chr3 (41-182)||(53228912-53229051)
chr3 (43-182)||(40936252-40936389)
chr3 (18-182)||(2008184-2008355)
chr3 (18-167)||(24707890-24708039)
chr3 (18-172)||(7327250-7327406)
chr3 (43-182)||(25580018-25580155)
chr3 (17-183)||(32373721-32373886)
chr3 (18-184)||(43975650-43975816)
chr3 (49-169)||(4761421-4761539)
chr3 (18-169)||(22445838-22445989)
chr3 (62-182)||(11467115-11467226)
chr3 (96-182)||(35844579-35844663)
chr3 (68-182)||(11356918-11357030)
chr3 (42-148)||(22451246-22451350)
chr3 (23-111)||(46994490-46994580)
chr3 (52-123)||(27480175-27480246)
chr3 (42-182)||(38591976-38592101)
chr3 (18-117)||(34133187-34133288)
chr3 (41-159)||(24488744-24488861)
chr3 (19-154)||(29164062-29164190)
chr3 (23-182)||(51212537-51212690)
chr3 (42-150)||(3654991-3655100)
chr3 (42-91)||(54828550-54828599)
chr3 (42-124)||(50475089-50475178)
chr3 (135-177)||(23165291-23165333)
chr3 (128-181)||(34133320-34133373)
chr3 (135-178)||(31706488-31706531)
chr3 (19-79)||(11835494-11835556)
chr3 (128-181)||(45174836-45174889)
[»] chr5 (52 HSPs)
chr5 (18-171)||(15992301-15992454)
chr5 (14-187)||(38527982-38528155)
chr5 (42-181)||(39573098-39573235)
chr5 (17-178)||(2888199-2888360)
chr5 (17-178)||(25669836-25669997)
chr5 (42-182)||(27330591-27330729)
chr5 (43-182)||(19120147-19120284)
chr5 (43-182)||(42343009-42343146)
chr5 (18-170)||(699411-699563)
chr5 (18-181)||(9200485-9200648)
chr5 (18-182)||(25500676-25500840)
chr5 (42-182)||(31705362-31705500)
chr5 (18-180)||(32563401-32563563)
chr5 (18-182)||(35511232-35511396)
chr5 (43-182)||(22019911-22020048)
chr5 (18-182)||(22255443-22255607)
chr5 (18-182)||(8437226-8437390)
chr5 (18-182)||(22981054-22981218)
chr5 (17-182)||(14409091-14409256)
chr5 (42-170)||(24886374-24886500)
chr5 (42-182)||(28416301-28416439)
chr5 (17-187)||(36867022-36867192)
chr5 (17-170)||(8741647-8741800)
chr5 (17-182)||(40133645-40133810)
chr5 (56-182)||(43254156-43254280)
chr5 (42-182)||(17157781-17157919)
chr5 (42-182)||(35934183-35934321)
chr5 (42-170)||(22973844-22973970)
chr5 (18-170)||(31786408-31786560)
chr5 (43-164)||(7693509-7693628)
chr5 (18-182)||(33908494-33908657)
chr5 (23-182)||(43308410-43308569)
chr5 (42-170)||(5837842-5837968)
chr5 (46-170)||(15724779-15724901)
chr5 (42-182)||(25889657-25889795)
chr5 (42-181)||(12910642-12910779)
chr5 (59-182)||(26269113-26269234)
chr5 (17-165)||(35504625-35504773)
chr5 (18-168)||(7208628-7208778)
chr5 (72-182)||(23115980-23116088)
chr5 (17-150)||(35826268-35826401)
chr5 (17-178)||(36860684-36860845)
chr5 (49-170)||(8467020-8467139)
chr5 (18-179)||(5830153-5830314)
chr5 (43-170)||(27318250-27318376)
chr5 (17-164)||(30969091-30969239)
chr5 (18-180)||(13956116-13956276)
chr5 (54-182)||(23954552-23954671)
chr5 (18-91)||(1429001-1429076)
chr5 (75-159)||(14919312-14919394)
chr5 (139-182)||(11898197-11898240)
chr5 (132-182)||(1428923-1428973)
[»] chr8 (42 HSPs)
chr8 (18-182)||(1149398-1149562)
chr8 (22-182)||(16446641-16446801)
chr8 (18-182)||(5299712-5299876)
chr8 (42-187)||(38644264-38644407)
chr8 (43-179)||(466119-466253)
chr8 (18-191)||(7890714-7890887)
chr8 (18-182)||(11727284-11727449)
chr8 (42-168)||(44869783-44869907)
chr8 (23-182)||(37970285-37970444)
chr8 (18-182)||(35859194-35859358)
chr8 (17-154)||(12587841-12587978)
chr8 (41-182)||(34895247-34895386)
chr8 (17-179)||(34951826-34951988)
chr8 (42-182)||(43643361-43643499)
chr8 (18-172)||(8803592-8803747)
chr8 (18-182)||(33198062-33198226)
chr8 (23-154)||(35459505-35459636)
chr8 (17-170)||(18259338-18259491)
chr8 (18-183)||(4132451-4132616)
chr8 (50-181)||(41362716-41362845)
chr8 (17-172)||(1953764-1953919)
chr8 (23-150)||(23854229-23854356)
chr8 (17-182)||(30654349-30654514)
chr8 (43-181)||(31933653-31933789)
chr8 (17-172)||(39098895-39099050)
chr8 (19-182)||(1205188-1205351)
chr8 (43-124)||(16223150-16223231)
chr8 (18-148)||(24823194-24823324)
chr8 (42-123)||(6098336-6098417)
chr8 (17-182)||(33906471-33906634)
chr8 (53-159)||(43025971-43026076)
chr8 (17-150)||(27082636-27082769)
chr8 (42-182)||(36694732-36694870)
chr8 (17-159)||(40862678-40862821)
chr8 (18-110)||(1149756-1149850)
chr8 (23-182)||(10554970-10555129)
chr8 (18-117)||(9864408-9864509)
chr8 (17-159)||(12876369-12876511)
chr8 (108-182)||(13307931-13308003)
chr8 (135-182)||(30650899-30650946)
chr8 (128-181)||(9864541-9864594)
chr8 (128-182)||(41910824-41910878)
[»] chr6 (17 HSPs)
chr6 (17-182)||(3879698-3879863)
chr6 (19-183)||(6090940-6091104)
chr6 (42-177)||(33892776-33892909)
chr6 (42-182)||(4318575-4318719)
chr6 (17-182)||(20768342-20768507)
chr6 (18-172)||(7054541-7054696)
chr6 (17-187)||(5627651-5627822)
chr6 (49-172)||(8513522-8513636)
chr6 (18-181)||(1946095-1946260)
chr6 (18-182)||(7234791-7234958)
chr6 (18-159)||(33619091-33619235)
chr6 (43-143)||(21016916-21017014)
chr6 (18-169)||(29182425-29182573)
chr6 (18-147)||(6089164-6089286)
chr6 (135-182)||(6613657-6613704)
chr6 (128-182)||(15491887-15491941)
chr6 (130-182)||(21016726-21016778)
[»] scaffold0318 (1 HSPs)
scaffold0318 (18-181)||(12170-12332)
[»] scaffold0291 (1 HSPs)
scaffold0291 (18-182)||(8148-8312)
[»] scaffold0022 (1 HSPs)
scaffold0022 (18-182)||(145775-145940)
[»] scaffold0002 (4 HSPs)
scaffold0002 (18-148)||(408223-408353)
scaffold0002 (42-146)||(415-517)
scaffold0002 (17-172)||(93871-94025)
scaffold0002 (130-182)||(690-742)
[»] scaffold0061 (1 HSPs)
scaffold0061 (17-182)||(44216-44381)
[»] scaffold0017 (1 HSPs)
scaffold0017 (17-182)||(154406-154571)
[»] scaffold0008 (1 HSPs)
scaffold0008 (85-170)||(267606-267689)


Alignment Details
Target: chr7 (Bit Score: 234; Significance: 1e-129; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 13 - 303
Target Start/End: Complemental strand, 34362108 - 34361826
Alignment:
Q  13 aatatcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg 110  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  34362108 aatatcaacgataaaatagtatctgtaagtccaagatattgcaaacattactagatgaattacttttgatcattaatcagtcattaacaatttaaaaatg 34362009  T
Q  111 aatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaattcaatagcctatttaattattttc 210  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  34362008 aatcaaacattaaagatttaaaattaactttttcaaaaaagt----------actgcaccgttgaagctccccaattcaatagcctatttaattattttc 34361919  T
Q  211 tttaagtttcatattggtttctttagtttcattcatctttgttattggctgcacctgctattccataccttttcccaccattgctgcataatt 303  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34361918 tttaagtttcatattggtttctttagtttcattcatctttgttattggctgcacctgctattccataccttttcccaccattgctgcataatt 34361826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 29173758 - 29173923
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||||||||| ||||||| || ||||||||||||||||||||    
T  29173758 caacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatca 29173857  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcccc 183  Q
    |||||| |||| ||||||||||||||||||||||||||| |||  |||||||| ||| ||||||||||    
T  29173858 aacatt-aaga-ttaaaattaactttttcaaaaaagtcagttttctgactgcatcgtagaagctcccc 29173923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 6546755 - 6546919
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| |||||   |||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  6546755 caacgataaaatagtacctgtaagtctaagatgaggcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 6546854  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  6546855 atcatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 6546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 187
Target Start/End: Complemental strand, 17842510 - 17842340
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||| ||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  17842510 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 17842411  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    |||||||||  | ||||||||||||||| ||||||||||| |||| |||||||||||| ||||||||| ||||    
T  17842410 aaacattaa--aattaaaattaacttttccaaaaaagtcaatttcttgactgcaccgtagaagctcccaaatt 17842340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 37110109 - 37110274
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  37110109 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 37110208  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | ||||||||||||||| ||||||| ||| |||| |||||||||||| |||||||||    
T  37110209 aaacattaa--aattaaaattaacttttccaaaaaaatcaatttcttgactgcaccgtagaagctccc 37110274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 37703424 - 37703259
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||     
T  37703424 tcaacgataaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatt 37703325  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| | ||||||||||||||||||||||||| |||  |||||||||| | |||||||||    
T  37703324 aaacatt-aaga-tcaaaattaactttttcaaaaaagtcaatttactgactgcaccatagaagctccc 37703259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 8861521 - 8861685
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||  ||||||||||| || ||||||||||||||||||||| || ||||||||||||||||||||    
T  8861521 caacgataaaatagtacatgtaagtctaagatgttgcatgcattactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatca 8861620  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||| | |||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  8861621 aacact-aaga-ttaaaattaactttttcaaaaaagtcagtttcatcactgcaccgttgaagctccc 8861685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 26980541 - 26980706
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||| ||| ||||| ||||||  |||||||||| ||||| | ||||||||||||| || || |||||||||||||||||||    
T  26980541 tcaacgataaaatagtatctgtaagtctaagatgttgcaagtattactagatgaattattgttgatcattaatcggtaatcaacaatttaaaaatgaatc 26980640  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || |||||| |||| ||||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  26980641 aatcattaa-gatt-aaaattaactttttcaaaaaagtcagtttcatgactgcaccttagaagctccc 26980706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 30055763 - 30055927
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  30055763 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 30055862  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | | ||||  | | |||||||||||| |||||||||||| |||| |||||||||||| |||||||||    
T  30055863 atcgttaa--aatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctccc 30055927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 15612680 - 15612520
Alignment:
Q  22 gataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaaca 119  Q
    |||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||||| | |||||||||||||||| || ||||||||||||||||||||| ||    
T  15612680 gataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaattattgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatca 15612581  T
Q  120 ttaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || |||| |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  15612580 tt-aaga-ttaaaattaactttttaaaaaaagtcagtttcatgactgcaccgtagaagctccc 15612520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 24211977 - 24212140
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||| || || ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  24211977 caacgataaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 24212076  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  24212077 aaacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctc 24212140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 31520666 - 31520502
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  31520666 caacgataaaatagtatctgtaagtccaagatgttgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatca 31520567  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||| |||  | ||||||||||||||||||||||| |||| | |||||||| | |||||||||    
T  31520566 aacattaa-gatc-ataattaactttttcaaaaaagtcagtttcctaactgcaccatagaagctccc 31520502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 26587991 - 26587853
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||  ||||||||||| |||||||||||||||||||||||| || |||||||||||||| ||||||||||| |||| ||||||||||||||    
T  26587991 caagatgttgcaggcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacatt-aaga-ttaaaattaacttt 26587894  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||||||| ||| |||| |||||||||    
T  26587893 ttcaaaaaagtcagtttcatgattgcgccgtagaagctccc 26587853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 37347261 - 37347398
Alignment:
Q  22 gataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaaca 119  Q
    |||||||||||||||||| ||| |||||||||||| ||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  37347261 gataaaatagtatctgtaagtccaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatcaaaca 37347360  T
Q  120 ttaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    |||| |||  | ||||||||||||||||||||||| ||||    
T  37347361 ttaa-gatc-ataattaactttttcaaaaaagtcagtttc 37347398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 5657406 - 5657241
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||| ||| || || ||||||||||||||| |    
T  5657406 caacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatgagtaatcaaaaatttaaaaatgaataa 5657307  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | ||||||||| |||||||||||||||||||||| |||| |||||| ||||||  || |||||||||    
T  5657306 atcattaaaga-ttaaaattaactttttcaaaaatgtcagtttcataactgcattgtagaagctccc 5657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 4583180 - 4583319
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    ||||||| |||||| ||||||| ||| |||||||||| ||||| |||||||||| |||||||||||||||||| ||||||| |||| |||||||||||||    
T  4583180 tcaagatgttgcaagcattactggatgaattactattaatcatgaatcagtcatcaacaatttaaaaatgaattaaacatt-aaga-ttaaaattaactt 4583277  T
Q  141 tttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||| |||  || ||||||||| |||||||||    
T  4583278 tttcaaaaaagtcaattttctggctgcaccgtagaagctccc 4583319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 9355751 - 9355590
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||| ||||||||||||||||| | || ||||||||||||||||||||    
T  9355751 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcaataatcaacaatttaaaaatgaatca 9355652  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    ||||||||  | | ||||||||||||||||||||||||| |||| || ||||||| | ||||||    
T  9355651 aacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgcctgcaccatagaagct 9355590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 35353370 - 35353508
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||| |||||||||||||||||||  || ||||||||||||||||||| |||||| |||| | ||||||||||||    
T  35353370 caagatgttgcaagcattactagatgaatcactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacatt-aaga-tcaaaattaacttt 35353467  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| |||||||||| | |||||||||    
T  35353468 ttcaaaaaagtcagtttcctgactgcaccttagaagctccc 35353508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 46481055 - 46480905
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||     
T  46481055 tcaacgataaaatagtacatgtaagtctaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaata 46480956  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    ||||||||| |||  | ||||||||||||||||||||||| |||| |||||||    
T  46480955 aaacattaa-gatc-ataattaactttttcaaaaaagtcagtttcctgactgc 46480905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 23 - 168
Target Start/End: Original strand, 18797568 - 18797713
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  18797568 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacat 18797667  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgca 168  Q
    | |||| | |||||||||||||| |||||||||| |||  ||||||||    
T  18797668 t-aaga-tcaaaattaacttttttaaaaaagtcagttttctgactgca 18797713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 31578963 - 31578837
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||| | || || ||||||||||||||||||||| |||  | | ||||||||||||    
T  31578963 caagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaataatttaaaaatgaatcaaacaataa--aatcaaaattaacttt 31578866  T
Q  142 ttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||||||||| |||| ||||||||||    
T  31578865 ttcaaaaaagtcagtttcctgactgcacc 31578837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 7335055 - 7335193
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||| ||||||||||||  || || ||||||||||||||||||||||| |||| | |||||||| |||    
T  7335055 caagatgttgcaagcattactagatgaattactattaatcattaatcagaaatcaataatttaaaaatgaatcaaacatt-aaga-tcaaaattaatttt 7335152  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| |||||||||| | |||||||||    
T  7335153 ttcaaaaaagtcaatttcctgactgcaccatagaagctccc 7335193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 12390548 - 12390410
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||  ||||||| |||| | ||||||||||||    
T  12390548 caagatgttgcaaccattactagatgaattactatttatcattaatcagtaattgacaatttaaaaatgaaataaacatt-aaga-tcaaaattaacttt 12390451  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | ||||||||||| |||| ||||| |||||| |||||||||    
T  12390450 tccaaaaaagtcaatttcctgacttcaccgtagaagctccc 12390410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 49 - 164
Target Start/End: Complemental strand, 25691436 - 25691322
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||| | || ||||| ||||    
T  25691436 ttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aagattaaaattaaattttttaaaaa 25691338  T
Q  149 aagtcactttcatgac 164  Q
    || ||| |||||||||    
T  25691337 aaatcagtttcatgac 25691322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 68 - 182
Target Start/End: Original strand, 38258867 - 38258979
Alignment:
Q  68 aattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||||||  | | ||||||||||||||||||||| ||| |||  |||||||    
T  38258867 aattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaactttttcaaaaaaatcagttttctgactgc 38258964  T
Q  168 accgttgaagctccc 182  Q
    ||||| |||||||||    
T  38258965 accgtagaagctccc 38258979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 22687467 - 22687599
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  22687467 caacgataaaatagtacatgtaagtccaagatgttgcaagcattaatagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 22687566  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaa 150  Q
     ||||| |||| |||||||||||||||||||||||    
T  22687567 tacatt-aaga-ttaaaattaactttttcaaaaaa 22687599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 32432688 - 32432851
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||| | |||||| ||||||||||| ||||| |||| ||||| ||||| | || ||||||||||||||||||||    
T  32432688 caacgataaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattattattaatcatgaatcaataatcaacaatttaaaaatgaatca 32432787  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||| |||| |||||| ||||||||| |||||||||| |||| |||||||||||| ||||||||    
T  32432788 aacatt-aaga-ttaaaagtaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctcc 32432851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 10359113 - 10358975
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| |||||||| || | |||||||||||||||||||| | || |||||||||||||||||||||||||| | || | ||||||||||||    
T  10359113 caagattttgcaagcattactaaatgatttactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatt-atga-tcaaaattaacttt 10359016  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||| | |||| | |||||||||| |||||||||    
T  10359015 ttcaaaaaagttagtttcttaactgcaccgtagaagctccc 10358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 11071439 - 11071547
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| || ||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||    
T  11071439 caacgataaaataatacctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatca 11071538  T
Q  116 aacattaaa 124  Q
    |||||||||    
T  11071539 aacattaaa 11071547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 27283980 - 27284145
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaat-gaatc 114  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || || |||||||||||  ||||    
T  27283980 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaataaaatc 27284079  T
Q  115 aaacattaaagatttaaaattaa-ctttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||||||  | | |||||||| |||||  |||||||||| |||| |||||||||||| ||||||||    
T  27284080 aaacattaa--aatcaaaattaatcttttcaaaaaaagtcaatttcctgactgcaccgtagaagctcc 27284145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 37704418 - 37704570
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||| |||||| |||| |||||||||||||||||||| ||| || ||||||||| ||||||||||    
T  37704418 caacgataaaatagtatctgtaagtccaagatgttgcaagcattaccagatgaattactattgatcattaattagtaatcaacaatttacaaatgaatca 37704517  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||||  | | || ||||  |||| ||||||||||| |||| ||||||||||    
T  37704518 aacattaa--aatcaagattagtttttccaaaaaagtcaatttcctgactgcacc 37704570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 10481841 - 10481993
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||| ||||||||||||| ||| ||| ||||| ||||||  |||||||||| |||||||||||||| ||||||||| ||||||||||||||||| ||| |    
T  10481841 caacaataaaatagtatccgtaagtccaagatgttgcaagtattactagatgaattactattgatcgttaatcagtaattaacaatttaaaaataaatta 10481940  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    || ||| |||| | ||||||||||||||||||||||||| |||  ||||||||||    
T  10481941 aatatt-aaga-tcaaaattaactttttcaaaaaagtcagttttctgactgcacc 10481993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 170
Target Start/End: Complemental strand, 15672651 - 15672532
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| ||||||||||||||||  |||| | || |||||||||||||||||| ||||||||| |  |||||||||| ||||||||||    
T  15672651 ttgcaagcattactagatgaattactattgatcatgcatcaataatcaacaatttaaaaatgaattaaacattaagg--ttaaaattaattttttcaaaa 15672554  T
Q  149 aagtcactttcatgactgcacc 170  Q
    |||||| |||| ||||||||||    
T  15672553 aagtcagtttcctgactgcacc 15672532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 111
Target Start/End: Original strand, 12165979 - 12166074
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatga 111  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  12165979 caacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 12166074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 44411465 - 44411313
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| |||||||| ||| ||||| |||||| ||||||||||| ||||| |||||| ||||||||||| || |||||||||||||||||| |    
T  44411465 caacgataaaatattatctgtaagtccaagatgttgcaagcattactagatgaattaatattgaccattaatcagtaatcaacaatttaaaaatgaatga 44411366  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    |||||| |||| | | ||||||| ||| ||||||||| | |||| ||||||||||    
T  44411365 aacatt-aaga-tcataattaacctttccaaaaaagttagtttcctgactgcacc 44411313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 23111455 - 23111589
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| ||| || ||||||||||  |||||||||||||||| ||||||| || |||||||||||||||||||||||||| |||| | ||| |||||||||    
T  23111455 aagatgttgaaagcattactagaagaattactattgatcataaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-tcaaagttaactttt 23111552  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    | |||||||||| |||  |||||| ||||| ||||||    
T  23111553 ttaaaaaagtcagttttctgactgtaccgtagaagct 23111589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 43925357 - 43925459
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||| ||||| ||||| | || |||||||||||||||||||||||||| |||| ||||||||||||||    
T  43925357 caagatgttgcaagcattactagatgaattactattaatcatgaatcactaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 43925454  T
Q  142 ttcaa 146  Q
    |||||    
T  43925455 ttcaa 43925459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 48928196 - 48928058
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||   || |||||||||||||| |||| ||||||  ||| | |||||||| |||    
T  48928196 caagatgttgcaaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaataaatcgaacatt-taga-tcaaaattaatttt 48928099  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || |||||||||| |||  | |||||||||| |||||||||    
T  48928098 tttaaaaaagtcaattttctaactgcaccgtagaagctccc 48928058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 32820978 - 32820846
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||| |||||| |||| | || ||||||||||||||||||||    
T  32820978 caacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattaatcattcatcaataatcaacaatttaaaaatgaatca 32820879  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaa 150  Q
    |||||| |||| | |||||||||||||| ||||||    
T  32820878 aacatt-aaga-tcaaaattaactttttaaaaaaa 32820846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 41764977 - 41764839
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||| ||| ||||| |||||||||||||||||  || ||||||||||||||||| | |||||| |||| | ||||||||| ||    
T  41764977 caagattttgcaagcattactggatgaattattattgatcattaatcagcaatcaacaatttaaaaatgaaccgaacatt-aaga-tcaaaattaacctt 41764880  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| ||||  |||| |||||| ||| |||||    
T  41764879 ttcaaaaaagtcaatttcccgactccaccgtagaaactccc 41764839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 21991943 - 21992027
Alignment:
Q  96 aacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||| | |||||| |||||||||    
T  21991943 aacaatttaaaaatgaatcaaacattaa-gatt-aaaattaaccttttcaaaaaagtcagtttcatgattacaccgtagaagctccc 21992027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 154
Target Start/End: Complemental strand, 32593105 - 32592996
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| || |||| |||||||||| ||||||||| |||||||||||||  || |||||||| |||||||||  |||||| |||| | ||||||||||||    
T  32593105 caagatgttacaaatattactagataaattactatggatcattaatcagcaatcaacaattt-aaaatgaattgaacatt-aaga-tcaaaattaacttt 32593009  T
Q  142 ttcaaaaaagtca 154  Q
    |||||||||||||    
T  32593008 ttcaaaaaagtca 32592996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 44598929 - 44599066
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcatta---acaatttaaaaatgaatcaaacattaaagatttaaaattaact 139  Q
    ||||| || ||| ||||||||||| ||  |||||||||||||||||| | || |   ||||||||||| |||||||| | |||| |||| |||||||| |    
T  44598929 aagatgttacaagcattactagatgaa--actattgatcattaatcaataataatcaacaatttaaaa-tgaatcaatcgttaa-gatt-aaaattaatt 44599023  T
Q  140 ttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||| ||| ||||||||||||||||| ||| |||||    
T  44599024 ttttcaaaaaaatcagtttcatgactgcaccgtagaaactccc 44599066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 182
Target Start/End: Original strand, 12166215 - 12166289
Alignment:
Q  106 aaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||||| |||| |||||||||||||| | |||||||| |||||||||||||  || |||||||||    
T  12166215 aaatgaatcaaacattaa-gatt-aaaattaacttttttagaaaagtcagtttcatgactgcagtgtagaagctccc 12166289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 33688107 - 33688053
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||| |||||||||| ||||| |||||||| || |||||||||    
T  33688107 ttaaaattaacttttttaaaaaagtcagtttcacgactgcactgtagaagctccc 33688053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 86
Target Start/End: Complemental strand, 33688161 - 33688117
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaa 86  Q
    |||||| |||||| ||||||||||| |||| ||||||||||||||    
T  33688161 caagatgttgcaagcattactagatgaattgctattgatcattaa 33688117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 8e-52; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 48353798 - 48353963
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| || |||||||||||||||||||    
T  48353798 tcaacgataaaatagtatctgtaagtccaagatattgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatc 48353897  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  48353898 aaacatt-aaga-ttaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctccc 48353963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 37451542 - 37451706
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  37451542 caacgataaaatagtatctgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 37451641  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | ||||||||||||||||||||||||| |||| | |||||||||| ||| |||||    
T  37451642 aacattaa--aataaaaattaactttttcaaaaaagtcaatttcttcactgcaccgtagaatctccc 37451706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 2960005 - 2960169
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  2960005 caacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 2960104  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | ||||||||||||||||||||| ||| |||| |||||||||||| |||| ||||    
T  2960105 aacattaa--aatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaagatccc 2960169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 7078982 - 7078828
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||    
T  7078982 caacgataaaatagtatatgtaagtctaagatattgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 7078883  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    | |||| |||| ||||||||||||||||||||||| ||| ||||||||||| |||||    
T  7078882 atcatt-aaga-ttaaaattaactttttcaaaaaaatcagtttcatgactgtaccgt 7078828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 34012301 - 34012137
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||| ||||   ||||||| |||||| |||||||| || |||||||||||||||||||||||| || ||||||||||||||||||||    
T  34012301 caacgataaaatagtatatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 34012202  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | |||||||||||||| |||||||||| |||| |||||||||||| |||||||||    
T  34012201 aacattaa--aatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctccc 34012137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 27532900 - 27532737
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||| ||||||||||||    
T  27532900 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatt-aaaaatgaatca 27532802  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  27532801 aacattaa-gatt-aaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctccc 27532737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 11742288 - 11742138
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  11742288 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 11742189  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    ||||||| |||| ||||||||||||||||||||||| ||| ||||||||||||    
T  11742188 aaacatt-aaga-ttaaaattaactttttcaaaaaaatcagtttcatgactgc 11742138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 32267291 - 32267455
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||| ||||||||||| ||||||   |||||| |||||| ||||||||||| |||||||||||| ||||||||||| || ||||||||||||||||||||    
T  32267291 caactataaaatagtacctgtaggtccaagatgttgcaagcattactagatgaattactattgaacattaatcagtaatcaacaatttaaaaatgaatca 32267390  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | |||||||| |||||||||||||||| |||| |||||||||||| |||||||||    
T  32267391 aacattaa--aatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 32267455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 39393667 - 39393804
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |||||||||  | ||||||||||||||    
T  39393667 caagatgttgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaataaaacattaa--aattaaaattaacttt 39393764  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    || |||||||||| ||||||||||||  ||| ||||||||    
T  39393765 tttaaaaaagtcaatttcatgactgccgcgtagaagctcc 39393804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 47279446 - 47279611
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||| ||||||||||||||||| ||| ||||| |||||||||||| ||||| |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  47279446 caacaataaaatagtatctgtaagtccaagatgttgcaaacattattagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatca 47279545  T
Q  116 aacattaaagatttaaaattaactttttc-aaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| ||||||||||||||||| |||||| ||| ||| ||||||||||||| |||||||||    
T  47279546 aacatt-aaga-ttaaaattaactttttcaaaaaaaatcagttttatgactgcaccgtagaagctccc 47279611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 46931665 - 46931831
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||| || |||||||||||||||||| || ||||||||||||||||||    
T  46931665 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatattattgatcattaatcagtaatcaacaatttaaaaatgaat 46931764  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||  | | ||||||||||||||||||||||||| |||| | |||||||||| |||||||||    
T  46931765 caaacattaa--aatcaaaattaactttttcaaaaaagtcagtttccttactgcaccgtagaagctccc 46931831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 27763230 - 27763075
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||   ||||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  27763230 caacgataaaatagtatctgtaagttcaagatgttgcaagcattactagataaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 27763131  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||  | | |||||||||||||||||||| |||| |||| |||||| |||||    
T  27763130 aaacattaa--aatcaaaattaactttttcaaaaatgtcaatttcctgactgtaccgt 27763075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 14758289 - 14758453
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||||||||||||||||||||||   || |||||||||||||||||||     
T  14758289 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatcg 14758388  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  14758389 aacatt-aaga-tcaaaattaactttttcaaaaaagtcagtttcgtgactgcaccgtagaagctccc 14758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 32216312 - 32216476
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| ||| |||| ||| ||||| |||||| ||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  32216312 caacgataaaataatatttgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 32216411  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | |||||||||||||| |||||||||| |||  |||||||||||| |||||||||    
T  32216412 aacatt-aaga-tcaaaattaacttttttaaaaaagtcagttttctgactgcaccgtagaagctccc 32216476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 145
Target Start/End: Original strand, 3309410 - 3309538
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| | ||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  3309410 caacgataaaatagtacccgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 3309509  T
Q  116 aacattaaagatttaaaattaactttttca 145  Q
    ||||||  ||||||||||||||||||||||    
T  3309510 aacatt-tagatttaaaattaactttttca 3309538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 10922989 - 10923148
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||||||||| ||| || || |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||    
T  10922989 ataaaatagtatctgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacat 10923088  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| | ||||||||||||||||||| ||||| |||  |||||||||| | |||||||||    
T  10923089 t-aaga-tcaaaattaactttttcaaaagagtcagttttctgactgcaccatagaagctccc 10923148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 23999603 - 23999769
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  23999603 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaat 23999702  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||  | | |||||||||||||| ||||| |||| |||| |||||||||| | |||||||||    
T  23999703 caaacattaa--aatcaaaattaacttttttaaaaaggtcaatttcctgactgcaccatagaagctccc 23999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 38823471 - 38823625
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| || ||||| ||| || || |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||| ||    
T  38823471 caacgataaaataatacctgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaaca 38823570  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    || ||| |||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  38823571 aatatt-aaga-ttaaaattaacttttttaaaaaagtcagtttcatgactgcaccgt 38823625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 47682414 - 47682249
Alignment:
Q  17 tcaacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| |||||    |||||| |||||| |||||||| || |||||||||||||||||||||||| |||||||||||||||| ||||     
T  47682414 tcaacgataaaatagtacctgtaaatccaagatgttgcaagcattactaaatgaattactattgatcattaatcagtaattaacaatttaaaaaagaatt 47682315  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| ||||||||||||| ||||||||||||| |||  |||||||||| | |||||||||    
T  47682314 aaacatt-aaga-ttaaaattaacttgttcaaaaaagtcagtttactgactgcaccatagaagctccc 47682249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 1547528 - 1547697
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||    
T  1547528 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatca 1547627  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    |||||| |||| |||||||||| |||||||||||||||| |||||| | || ||||| ||| ||||| ||||    
T  1547628 aacatt-aaga-ttaaaattaattttttcaaaaaagtcagtttcataattgtaccgtagaaactccctaatt 1547697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 3535180 - 3535344
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| || || ||| ||||| |||||| ||||||||||| ||||||||||||||||||||||   || ||||||||||||||||||||    
T  3535180 caacgataaaatagtacctttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatca 3535279  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| |||||| ||||||||| |||||| ||| |||||||||| |||||| |||||||||    
T  3535280 aacatt-aaga-ttaaaactaactttttaaaaaaaatcagtttcatgactacaccgtagaagctccc 3535344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 42 - 159
Target Start/End: Complemental strand, 28564676 - 28564561
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||  | | ||||||||||||    
T  28564676 caagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaacttt 28564579  T
Q  142 ttcaaaaaagtcactttc 159  Q
    ||||||||||||| ||||    
T  28564578 ttcaaaaaagtcaatttc 28564561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 28769909 - 28770051
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| ||||| ||| ||||| ||||||||||| |||||| |||||||||||||||||||| | | || |||||||||||||||||||    
T  28769909 tcaacgataaaatagtacctgtaagtccaagatgttgcaaacattgctagatgaattactattgatcattaattaataatcaacaatttaaaaatgaatc 28770008  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    |||||||||  | ||||||||||||||||||||||| ||| ||||    
T  28770009 aaacattaa--aattaaaattaactttttcaaaaaaatcaatttc 28770051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 9902973 - 9902812
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| | ||| ||| |||||  ||||| || |||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  9902973 caacgataaaatagtaccagtaagtccaagatgctgcaagcactactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 9902874  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    || |||||  | | |||||||||||||||||||||||||  ||| |||||||||||| ||||||    
T  9902873 aatattaa--aatcaaaattaactttttcaaaaaagtcaaattcttgactgcaccgtagaagct 9902812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 19899688 - 19899523
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  19899688 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 19899589  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||||||||||| ||||||||||| |||| | ||||||| || |||||||||    
T  19899588 aaacattaa--aatcaaaattaacttttccaaaaaagtcagtttcctaactgcactgtagaagctccc 19899523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 30254706 - 30254843
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||||||||||||| |||||||| | || ||||||||||||||||||||||||||||  | | ||||||||||||    
T  30254706 caagatgttgcaagcattactagatgaattactattgattattaatcaataatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaacttt 30254803  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    || |||||||||| |||| |||||||||||| ||| ||||    
T  30254804 tttaaaaaagtcagtttcctgactgcaccgtagaaactcc 30254843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 31962871 - 31963038
Alignment:
Q  16 atcaacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaattt-aaaaatgaa 112  Q
    ||||||||||||||| ||| ||||   | ||||| |||||| ||||| ||||| || |||||||||||||||||| || || |||||||| |||||| ||    
T  31962871 atcaacgataaaataatatatgtaagtttaagatgttgcaagcattattagatgaactactattgatcattaatcggtaatcaacaattttaaaaataaa 31962970  T
Q  113 tcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||| |||| ||||||||||||||||||||||||| |||||| |||||||||| |||||||||    
T  31962971 tcaaacattaa-gatt-aaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagctccc 31963038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 8222385 - 8222550
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaa-tc 114  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||| ||    
T  8222385 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaatta-tattgatcattaatcagtaatcaacaatttaaaaatgaaatc 8222483  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcccc 183  Q
    ||||||||||   | ||||||||||||||||||||||||| |||  |||||| ||||| ||||||||||    
T  8222484 aaacattaaaa--tcaaaattaactttttcaaaaaagtcagttttctgactgtaccgtagaagctcccc 8222550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 15168352 - 15168515
Alignment:
Q  17 tcaacgataaaatagtatctgta-gt-caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| || |||||| |||||| ||||| ||||| |||||||||||||||||||||||  || |||||||||||||||||||    
T  15168352 tcaacgataaaatagtacatgtaagtacaagatgttgcaagcattattagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatc 15168451  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
     |||||| |||| | ||||||||||||||||||||| ||| |||| | |||||||||| |||||||    
T  15168452 gaacatt-aaga-tcaaaattaactttttcaaaaaaatcagtttcctaactgcaccgtagaagctc 15168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 15383190 - 15383355
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg-aatc 114  Q
    |||||||||||||||| |||||    |||||| |||||| ||||||||||| ||||||||||||| |||||||||  || ||||||||||||||| ||||    
T  15383190 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagcaatcaacaatttaaaaatgaaatc 15383289  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||||||||||||||||||| ||| |||| |||||| ||||| |||||||||    
T  15383290 aaacattaa--aatcaaaattaactttttcaaaaaaatcaatttcctgactgaaccgtagaagctccc 15383355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 51129115 - 51129255
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  51129115 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 51129214  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    ||  |||||| ||   |||||||||||||||||||||||| ||||    
T  51129215 aagtattaaa-at---aaattaactttttcaaaaaagtcaatttc 51129255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 22170995 - 22171132
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||||||||| ||||| |||||||||||||||||||| ||| || |||||||||||||| |||||||||||||  | | |||||||||||||    
T  22170995 aagatgttgcaaacattattagataaattactattgatcattaattagtaatcaacaatttaaaaataaatcaaacattaa--aatcaaaattaactttt 22171092  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||| ||| |||  | | |||||||| |||||||||    
T  22171093 tcaaaaaaatcagttttctaattgcaccgtagaagctccc 22171132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 27227405 - 27227297
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||| ||||||||||||||     
T  27227405 tcaacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaccatttaaaaatgaatt 27227306  T
Q  115 aaacattaa 123  Q
    |||||||||    
T  27227305 aaacattaa 27227297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 238432 - 238300
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| |||||||| ||| ||||| |||||| ||||||||||| |||||||||| ||||| ||||||| ||  |||||||||||||||||||    
T  238432 caacgataaaataatatctgtaagtccaagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatccacaatttaaaaatgaatca 238333  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaa 150  Q
    |||||| |||| ||||||| |||||||||||||||    
T  238332 aacatt-aaga-ttaaaatcaactttttcaaaaaa 238300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 42 - 123
Target Start/End: Original strand, 21289883 - 21289964
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaa 123  Q
    |||||| |||||||||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||    
T  21289883 caagatgttgcaaacattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa 21289964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 27563823 - 27563672
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    |||||||||||||||| |||| ||| ||||| ||||||  |||||||||| ||||| |||||||||||||||||| || ||||||||||||| |||||||    
T  27563823 aacgataaaatagtatatgtaagtccaagatgttgcaagtattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaaagaatcaa 27563724  T
Q  117 acattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||| |||  | ||||||||||| ||||||| ||| |||| ||||||||||    
T  27563723 acattaa-gatc-ataattaacttttccaaaaaaatcagtttcctgactgcacc 27563672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 27267120 - 27266959
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| |||||||| | || || |||||||||||||||     
T  27267120 tcaacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgataattaatcaataatcaataatttaaaaatgaatt 27267021  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    ||||||| |||| | ||||||||| ||||| ||||||||| |||| ||| |||||| | ||||||    
T  27267020 aaacatt-aaga-tcaaaattaac-ttttccaaaaagtcagtttcctgaatgcaccatagaagct 27266959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 16415903 - 16416010
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||| ||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  16415903 caacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 16416002  T
Q  116 aacattaa 123  Q
    ||||||||    
T  16416003 aacattaa 16416010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 182
Target Start/End: Complemental strand, 10181893 - 10181762
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| |||||||||||| |||||||||   || |||||||||||||||||||||||||||| |||  | ||||||||||| |||||    
T  10181893 ttgcaagcattactagatgaattactattgaacattaatcaacaatcaacaatttaaaaatgaatcaaacattaa-gatc-ataattaacttttccaaaa 10181796  T
Q  149 aagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||| | |||| |||||||||| | |||||||||    
T  10181795 aagttagtttcctgactgcaccatagaagctccc 10181762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 1359854 - 1359747
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||||   |||| || |||||| ||||||| ||| ||||||||| |||||||||||||| || ||||||||||||||||||||    
T  1359854 caacgataaaatagtacctgtaagttcaaaatgttgcaagcattactggatgaattactatcgatcattaatcagtaatcaacaatttaaaaatgaatca 1359755  T
Q  116 aacattaa 123  Q
    ||||||||    
T  1359754 aacattaa 1359747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 58 - 182
Target Start/End: Original strand, 15752328 - 15752450
Alignment:
Q  58 ttactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactt 157  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| |||| | |||||||| |||||  ||||| ||| ||    
T  15752328 ttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacatt-aaga-tcaaaattaattttttttaaaaaatcaatt 15752425  T
Q  158 tcatgactgcaccgttgaagctccc 182  Q
    |  |||||||||||| |||||||||    
T  15752426 ttctgactgcaccgtagaagctccc 15752450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 69 - 182
Target Start/End: Original strand, 48620906 - 48621010
Alignment:
Q  69 attactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgca 168  Q
    |||||||||||||||||||||       ||||||| ||||||||||||||||||| |||| |||||||||||||||| |||||||| |||||||||||||    
T  48620906 attactattgatcattaatca-------acaattttaaaatgaatcaaacattaa-gatt-aaaattaactttttcagaaaagtcagtttcatgactgca 48620996  T
Q  169 ccgttgaagctccc 182  Q
    |||| |||||||||    
T  48620997 ccgtagaagctccc 48621010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 49 - 179
Target Start/End: Original strand, 4330571 - 4330699
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| |||||| ||||||||||||||||| || |||||| ||||||||||||||||||| |||| | |||||||| |||| |||||    
T  4330571 ttgcaagcattactagatgaattacaattgatcattaatcagtaatcaacaatataaaaatgaatcaaacatt-aaga-tcaaaattaatttttccaaaa 4330668  T
Q  149 aagtcactttcatgactgcaccgttgaagct 179  Q
    || ||| ||   |||||||||||| ||||||    
T  4330669 aaatcagttgtctgactgcaccgtagaagct 4330699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 25160889 - 25160998
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg-aatc 114  Q
    ||||||||||||||||  |||| ||| ||||| |||||| |||||||| || |||||||||||||||||||||||| || ||||||||||||||| ||||    
T  25160889 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatc 25160988  T
Q  115 aaacattaaa 124  Q
    ||||||||||    
T  25160989 aaacattaaa 25160998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 42721319 - 42721401
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaa 124  Q
    |||||| ||||||  |||||||||| |||||||||||||||||||| ||| || || ||||||||||||||||||||||||||    
T  42721319 caagatgttgcaattattactagattaattactattgatcattaatgagtaatcaataatttaaaaatgaatcaaacattaaa 42721401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 42 - 124
Target Start/End: Complemental strand, 30326845 - 30326762
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg-aatcaaacattaaa 124  Q
    |||||| |||||| ||||||||||| |||||||||||||||| ||||||| || ||||||||||||||| ||||||| ||||||    
T  30326845 caagatgttgcaagcattactagatgaattactattgatcatcaatcagtaatcaacaatttaaaaatgaaatcaaatattaaa 30326762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 160
Target Start/End: Complemental strand, 31621468 - 31621325
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaattta-aaaatgaatc 114  Q
    ||||||||||||||||  ||||   |||| || |||||| ||||| ||||| || |||||||||||||||||||   || ||||||||| ||||||||||    
T  31621468 caacgataaaatagtacatgtaagttcaatatgttgcaagcattagtagatgaactactattgatcattaatcatcaatcaacaatttaaaaaatgaatc 31621369  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttca 160  Q
     |||||| |||| | ||||||||||||||||||||||||| |||||    
T  31621368 gaacatt-aaga-tcaaaattaactttttcaaaaaagtcagtttca 31621325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 40885096 - 40885207
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||||||||||||||| |||||||||||||||||||| ||  || || |||| ||||||||||| || ||| ||| || ||| ||||| ||    
T  40885096 caagatgttgcaaacattactagatgaattactattgatcattaattagcaatcaataattcaaaaatgaatcgaatatt-aaggttaaaagttaacatt 40885194  T
Q  142 ttcaaaaaagtca 154  Q
    || ||||||||||    
T  40885195 tttaaaaaagtca 40885207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 69 - 182
Target Start/End: Complemental strand, 33725478 - 33725366
Alignment:
Q  69 attactattgatcattaatcagtcattaacaatttaaaaa-tgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    ||||||||||||||||||||||  || ||||||| ||||| |||||| |||||||| |||  ||||| ||||||||||||||| ||| |||| |||||||    
T  33725478 attactattgatcattaatcagcaatcaacaattaaaaaaatgaatcgaacattaa-gatc-aaaataaactttttcaaaaaaatcagtttcctgactgc 33725381  T
Q  168 accgttgaagctccc 182  Q
    | |||  ||||||||    
T  33725380 aacgtataagctccc 33725366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 41926440 - 41926521
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaa 124  Q
    ||||||||| ||| ||||||||||| |||||||||||||||||||| | | || ||  |||||||| ||||||||||||||||    
T  41926440 caagatatt-caagcattactagatgaattactattgatcattaattaataatcaatgatttaaaattgaatcaaacattaaa 41926521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 18422934 - 18423006
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacatt 121  Q
    |||||| |||||| |||| |||||| |||||||||||||||||||||       ||||||||||||||||||||||||||    
T  18422934 caagatgttgcaagcattgctagatgaattactattgatcattaatc-------aacaatttaaaaatgaatcaaacatt 18423006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 42 - 107
Target Start/End: Complemental strand, 37618794 - 37618729
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaa 107  Q
    |||||| |||||| ||||||||||| ||||| |||||| ||||||||| | || ||||||||||||    
T  37618794 caagatgttgcaagcattactagatgaattagtattgaccattaatcaataatcaacaatttaaaa 37618729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 10598223 - 10598264
Alignment:
Q  136 aactttttcaaaaaagtcactttcatgactgcaccgttgaag 177  Q
    ||||||||||||||||||| |||| |||||||||||| ||||    
T  10598223 aactttttcaaaaaagtcagtttcttgactgcaccgtagaag 10598264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 38759859 - 38759911
Alignment:
Q  130 aaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||||||||||||||| ||   |||||||||| | |||||||||    
T  38759859 aaaattaactttttcaaaaaagtcagttaattgactgcaccatagaagctccc 38759911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 5e-50; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 33660320 - 33660155
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtca-agatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||||||| |||  |||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  33660320 tcaacgataaaatagtatctgtaagtctgagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 33660221  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | |||||||||||||||||| |||||||| ||||||||||||||||| |||||||||    
T  33660220 aaacattaa--aattaaaattaactttttcagaaaagtcagtttcatgactgcaccgtagaagctccc 33660155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 181
Target Start/End: Complemental strand, 43648161 - 43648024
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| | |||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||  | | ||||||||||||    
T  43648161 caagatgtcgcaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaacttt 43648064  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    ||||||||||||| |||| |||||||||||| ||||||||    
T  43648063 ttcaaaaaagtcaatttcctgactgcaccgtagaagctcc 43648024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 19424557 - 19424420
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  19424557 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcatt-aaga-ttaaaattaactttt 19424460  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||| ||| ||||||||||||| |||||||||    
T  19424459 tcaaaaaagtcagtttgatgactgcaccgtagaagctccc 19424420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 27349890 - 27349731
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||     
T  27349890 caacgataaaatagtatctgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc- 27349792  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
          ||| |||||||||||||||||||| |||||||| |||||||||||||| || |||||||||    
T  27349791 ------aaatatttaaaattaactttttcagaaaagtcagtttcatgactgcactgtagaagctccc 27349731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 35959156 - 35959317
Alignment:
Q  17 tcaacgataaaatagtatctgtagtcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    |||||||||||||||||  |||   |||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  35959156 tcaacgataaaatagtacatgtc--caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaa 35959253  T
Q  117 acattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||  | | ||||||||||||||||||||||||| |||  ||| |||||||| |||||||||    
T  35959254 acattaa--aatcaaaattaactttttcaaaaaagtcaattttttgagtgcaccgtagaagctccc 35959317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 41961101 - 41961265
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| || ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||    
T  41961101 caacgataaaataatacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 41961200  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | ||||||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  41961201 aacattaa--aatcaaaattaactttttcaaaaaattcagtttcctgactgcaccgtagaagctccc 41961265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 18494223 - 18494059
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| ||| || ||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  18494223 caacgataaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaaatgaatca 18494124  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| |||||||||| ||||||  ||||||||    
T  18494123 aacatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcatgactacaccgtataagctccc 18494059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 11366324 - 11366158
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  11366324 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaat 11366225  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||  | ||||||||||||||||||||||| ||| |||  |||||||||||| || ||||||    
T  11366224 caaacattaa--aattaaaattaactttttcaaaaaaatcaattttctgactgcaccgtagatgctccc 11366158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 7006880 - 7006726
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||| ||||||||||||||||||| || ||||||||||||||||||||    
T  7006880 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaatttaaaaatgaatca 7006781  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||| | || ||||||||||||||||||||||||||| |||||||| ||||||||    
T  7006780 aacatt-atga-ttaaaattaactttttcaaaaaagtcattttcatgattgcaccgt 7006726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 19289239 - 19289101
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||| ||||||| |||| | ||||||||||||    
T  19289239 caagatattgcaagcattactagatgaattactattgatcattaatcagaaattaacaatttaaaaatgaattaaacatt-aaga-tcaaaattaacttt 19289142  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| | |||||||| | |||||||||    
T  19289141 ttcaaaaaagtcagtttcctaactgcaccatagaagctccc 19289101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 33709148 - 33709015
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||||||||||  | ||||||||||||||    
T  33709148 caagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaatgaatcaaacattaa--aattaaaattaacttt 33709051  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaag 177  Q
    ||||||||| ||| | ||||||||||||||| ||||    
T  33709050 ttcaaaaaattcagtatcatgactgcaccgtagaag 33709015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 4167182 - 4167347
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||| ||| |||| ||| ||||| |||||| ||||||| ||| |||||||||| ||||| ||||||| || ||||||||||||||||||     
T  4167182 tcaacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatt 4167281  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||  |||||||||||| |||||||||    
T  4167282 aaacatt-aaga-ttaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 4167347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 184 - 303
Target Start/End: Complemental strand, 17332979 - 17332862
Alignment:
Q  184 aattcaatagcctatttaattattttcttt-aagtttcatattggtttcttt-agtttcattcatctttgttattggctgcacctgctattccatacctt 281  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||||    
T  17332979 aattcaataccctatttaattattttctttaaagtttcatattggtttctttgagt----ttcatctttgttattggctgcacctgctattccatacctt 17332884  T
Q  282 ttcccaccattgctgcataatt 303  Q
    || | || ||||||||||||||    
T  17332883 tttctactattgctgcataatt 17332862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 31862139 - 31862277
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||||||| | |||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||| ||| |||| | ||||||||||||    
T  31862139 caagatattgtagacattactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatatt-aaga-tcaaaattaacttt 31862236  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| ||||  ||||||||| | |||||||||    
T  31862237 ttcaaaaaagtcagtttcccgactgcaccatagaagctccc 31862277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 163
Target Start/End: Complemental strand, 43770790 - 43770645
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||| |||||||||||||| ||   ||||||| |||||| ||||||||||| |||| ||||||||||||||| ||  || ||||||||||||||||||||    
T  43770790 caacaataaaatagtatctttaagttcaagatgttgcaagcattactagatgaatttctattgatcattaattagaaatcaacaatttaaaaatgaatca 43770691  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatga 163  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  43770690 aacatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcatga 43770645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 2325320 - 2325156
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||||    |||||| |||||| ||||||||||| ||||||||||||| |||||||||| || |||||||||||||| |||||    
T  2325320 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaataaatca 2325221  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | |||||||||||||| |||||| ||| |||  |||||||||||| |||||||||    
T  2325220 aacatt-aaga-tcaaaattaactttttaaaaaaaatcaattttctgactgcaccgtagaagctccc 2325156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 4763893 - 4764057
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    ||||||||||||||| ||||| ||| |||||||||||| ||||||||| | |||||||||||||||||||||||| || || ||||||||||||||||||    
T  4763893 aacgataaaatagtacctgtaagtccaagatattgcaagcattactagttgaattactattgatcattaatcagtaatcaataatttaaaaatgaatcaa 4763992  T
Q  117 acattaaagatttaaaattaac-tttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||  | | ||||||||| |||||  ||||||||| |||| | |||||||||| |||||||||    
T  4763993 acattaa--aatcaaaattaacttttttttaaaaagtcagtttccttactgcaccgtagaagctccc 4764057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 26357838 - 26357974
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||| | || ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  26357838 caacgataaaatagtatttttaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 26357937  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    ||||||||  | | |||||||||||||| ||||||||||    
T  26357938 aacattaa--aatcaaaattaacttttttaaaaaagtca 26357974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 185
Target Start/End: Original strand, 3177226 - 3177367
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    ||||||||| ||| ||||||||||| |||||||||| ||||| ||| ||| || |||||||| ||||| |||||||||||||  | |||||| |||||||    
T  3177226 caagatattacaagcattactagatgaattactatttatcatgaataagtaatcaacaatttgaaaataaatcaaacattaa--aattaaaagtaacttt 3177323  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccccaa 185  Q
    ||||||||||||| |||| |||||||||||| ||||||| ||||    
T  3177324 ttcaaaaaagtcagtttcctgactgcaccgtagaagctcaccaa 3177367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 43 - 161
Target Start/End: Original strand, 5881817 - 5881933
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||| |||| |||||||||||||||    
T  5881817 aagatgttgcaagcattactagatgaattactattgatcattattcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactttt 5881914  T
Q  143 tcaaaaaagtcactttcat 161  Q
    ||| |||| ||| ||||||    
T  5881915 tcataaaaatcagtttcat 5881933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 21 - 172
Target Start/End: Original strand, 13711723 - 13711874
Alignment:
Q  21 cgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaac 118  Q
    ||||||||||||| ||||| ||| ||||| ||||||||| |||||||| |||||||||||||||||||||||| || ||| ||||||||||||||||| |    
T  13711723 cgataaaatagtacctgtaagtctaagatgttgcaaacaatactagatgaattactattgatcattaatcagtaatcaacgatttaaaaatgaatcaatc 13711822  T
Q  119 attaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    ||| |  | |||||||||| ||||||||||||| || ||| || ||||||||||    
T  13711823 attta--aattaaaattaattttttcaaaaaagacaattttataactgcaccgt 13711874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 168
Target Start/End: Complemental strand, 31570649 - 31570526
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| |||| |||||| |||||||||||||||||||||||| || ||  ||||||||||||||||| ||||||  | | |||||||||||||    
T  31570649 aagatgttgcaagcattgctagatgaattactattgatcattaatcagtaatcaaatatttaaaaatgaatcaatcattaa--aatgaaaattaactttt 31570552  T
Q  143 tcaaaaaagtcactttcatgactgca 168  Q
    | |||||||||| |||||||||||||    
T  31570551 taaaaaaagtcagtttcatgactgca 31570526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 154
Target Start/End: Original strand, 41465762 - 41465898
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| ||||||||||||||| || |||||||||||||||||||||||  || |||||||||||| ||||||     
T  41465762 caacgataaaatagtacatgtaagtccaagatgttgcaaacattactatatgaattactattgatcattaatcagcaatcaacaatttaaaattgaatcg 41465861  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    |||||| |||| | |||||||||||||||||||||||||    
T  41465862 aacatt-aaga-tcaaaattaactttttcaaaaaagtca 41465898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 19 - 123
Target Start/End: Complemental strand, 19500856 - 19500750
Alignment:
Q  19 aacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    |||||||||||||||  |||| |  |||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  19500856 aacgataaaatagtacatgtaatttcaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaa 19500757  T
Q  117 acattaa 123  Q
    | |||||    
T  19500756 atattaa 19500750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 42 - 154
Target Start/End: Original strand, 37905997 - 37906108
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg-aatcaaacattaaagatttaaaattaactt 140  Q
    |||||| ||||||  |||||| ||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||  | | |||||||| ||    
T  37905997 caagatgttgcaagaattactggatgaattactattgatcattaatcagtaattaacaatttaaaaatgaaatcaaacattaa--aatcaaaattaattt 37906094  T
Q  141 tttcaaaaaagtca 154  Q
    ||||||||||||||    
T  37906095 tttcaaaaaagtca 37906108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 186
Target Start/End: Complemental strand, 41051238 - 41051077
Alignment:
Q  22 gataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaaca 119  Q
    |||||||||||| |||||   ||||||| ||| || |||| |||||| ||||  |||||||||||||||| | || ||||||| ||||||||||||||||    
T  41051238 gataaaatagtacctgtaagttcaagatgttgtaagcattgctagatgaattgttattgatcattaatcaataatcaacaattcaaaaatgaatcaaaca 41051139  T
Q  120 ttaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaat 186  Q
    ||||  | |||||||||| ||||||||||   ||| ||||||||||||||||| ||||||| |||||    
T  41051138 ttaa--aattaaaattaattttttcaaaa---tcattttcatgactgcaccgtagaagctctccaat 41051077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 44913925 - 44914090
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactaga---tcaattactattgatcattaatcagtcattaacaatttaaaaatgaa 112  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||| ||||   | |||||||||| ||||| ||||||| || |||||||||||||||||    
T  44913925 caacgataaaatagtacatgtaagtccaagatgttgcaagcattattagaaaatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaa 44914024  T
Q  113 tcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    ||||||||| |||| |||||||||||||||||||||||  || |||  |||||||||||| |||||||    
T  44914025 tcaaacatt-aaga-ttaaaattaactttttcaaaaaaaccagtttgctgactgcaccgtagaagctc 44914090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 56 - 179
Target Start/End: Complemental strand, 39167271 - 39167150
Alignment:
Q  56 cattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcac 155  Q
    ||||||||||| |||||||||| || || ||||||| || |||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||     
T  39167271 cattactagatgaattactattaattatgaatcagtaatcaacaatttaaaaatgaataaaacatt-aaga-ttaaaattaactttttcaaaaaagtcag 39167174  T
Q  156 tttcatgactgcaccgttgaagct 179  Q
    |||  ||| ||||| || ||||||    
T  39167173 ttttctgattgcacagtagaagct 39167150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 41463505 - 41463400
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| ||| |||||||| ||||| |||||||||||||||||||||| | ||||| |||||||||||||||||| |||| |||| |||||||||||||||    
T  41463505 aagatgttgtaaacattaatagataaattactattgatcattaatcaataattaataatttaaaaatgaatcaatcatt-aaga-ttaaaattaactttt 41463408  T
Q  143 tcaaaaaa 150  Q
    | ||||||    
T  41463407 taaaaaaa 41463400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 57 - 182
Target Start/End: Complemental strand, 29242046 - 29241923
Alignment:
Q  57 attactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcact 156  Q
    |||||||||| |||||||||||| ||||||||||  || |||||||||||||||||||||||||||| |||  | ||||||||||| ||||||  ||| |    
T  29242046 attactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaa-gatc-ataattaacttttccaaaaagttcagt 29241949  T
Q  157 ttcatgactgcaccgttgaagctccc 182  Q
    ||| |||||||||| | |||||||||    
T  29241948 ttcctgactgcaccatagaagctccc 29241923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 45328031 - 45328114
Alignment:
Q  96 aacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  45328031 aacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaactttttcaaaaaagtcagtttc-tgactgcaccgtagaagctccc 45328114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 172
Target Start/End: Complemental strand, 18257453 - 18257326
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| ||||| |||| ||||||||||||| ||  ||||||| ||||||||| ||  |||||    |||||||||||||||    
T  18257453 aagatgttgcaagcattactagatgaattattatttatcattaatcagtaatcgacaattttaaaatgaataaattattaa--tattaaaattaactttt 18257356  T
Q  143 tcaaaaaagtcactttcatgactgcaccgt 172  Q
    ||| |||||||| ||| || ||||||||||    
T  18257355 tcacaaaagtcagtttgataactgcaccgt 18257326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 107
Target Start/End: Original strand, 4478630 - 4478717
Alignment:
Q  22 gataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaa 107  Q
    |||||||||||||| ||| ||| ||||| |||||| ||||||||||| |||| ||||||||||||||||||| || ||||||||||||    
T  4478630 gataaaatagtatcggtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcagtaatcaacaatttaaaa 4478717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 150
Target Start/End: Original strand, 33902317 - 33902407
Alignment:
Q  58 ttactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaa 150  Q
    ||||||||| ||||| ||||||| ||||||| || || |||||||||||||| ||||||||||| |||| | |||||||||||||| ||||||    
T  33902317 ttactagatgaattattattgattattaatctgtaatcaacaatttaaaaataaatcaaacatt-aaga-tcaaaattaacttttttaaaaaa 33902407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 44286211 - 44286285
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagt 91  Q
    ||||||||||||||||||||| ||| ||||| |||||| ||||  ||||| ||||||||||||||||||||||||    
T  44286211 aacgataaaatagtatctgtaagtctaagatgttgcaagcattgttagatgaattactattgatcattaatcagt 44286285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 43 - 91
Target Start/End: Original strand, 19314135 - 19314183
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagt 91  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  19314135 aagatgttgcaagcattactagatgaattactattgatcattaatcagt 19314183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 4263993 - 4263926
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaa 108  Q
    ||||||| |||||| ||||||||||| || || ||||||||||| |||||| || |||||||||||||    
T  4263993 tcaagatgttgcaagcattactagatgaaataatattgatcattgatcagtaatcaacaatttaaaaa 4263926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 36642307 - 36642361
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||| ||||||||||||||||| |||||||| |||||| | |||||||||    
T  36642307 ttaaaattagctttttcaaaaaagtcaatttcatgaatgcaccatagaagctccc 36642361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 123
Target Start/End: Complemental strand, 33550896 - 33550818
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaat----cagtcattaacaatttaaaaatgaatcaaacattaa 123  Q
    |||||| ||||||||||| ||| ||||||||| ||| ||    |||| || ||||||||||||||||||||||||||||    
T  33550896 ttgcaagcattactagatgaataactattgattatttattaaccagtaatcaacaatttaaaaatgaatcaaacattaa 33550818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 4263756 - 4263682
Alignment:
Q  111 aatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    ||||||||||||| |||| |||||||||||||| |||||| ||| ||||||||||| | ||| ||| ||||| ||||    
T  4263756 aatcaaacattaa-gatt-aaaattaactttttaaaaaaaatcagtttcatgactgtatcgtagaaactccctaatt 4263682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 37287989 - 37288154
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||| ||||| |||||||||||| ||||||||||| || || |||||||||||||||||    
T  37287989 caacgataaaatagtacatgtaagtccaagatgttgcaagcattattagatgaattactattgagcattaatcagtaatcaataatttaaaaatgaatca 37288088  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  37288089 aacattaa-gatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgtggaagctccc 37288154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 7703770 - 7703931
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||||    
T  7703770 caacgataaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactatttatcattaatcagtaatcaacaatttaaaaatgaatca 7703869  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  7703870 aacatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcatgactgcaccgtagaagct 7703931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 36493639 - 36493475
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| |||||||||||| ||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||||||    
T  36493639 caacgataaaatagtatctgtaagtctaagatattgcaagcattactcgatgaattactattgatcattaatccgtaattaacaatttaaaaatgaatca 36493540  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||| |||  | ||||||||||||||||||||||| |||| |||||||||| | |||||||||    
T  36493539 aacattaa-gatc-ataattaactttttcaaaaaagtcaatttcctgactgcaccatagaagctccc 36493475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 37775919 - 37776082
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  37775919 caacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 37776018  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||| |||| || ||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  37776019 aacatt-aaga-ttgaaattaacttttttaaaaaagtcaatttcatgactgcaccgtagaagctcc 37776082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 29584124 - 29583986
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||||| |||| ||||||||||||||    
T  29584124 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 29584027  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||||| ||||||||||||||||| |||||||||    
T  29584026 ttcaaacaagtcaatttcatgactgcaccgtagaagctccc 29583986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 182
Target Start/End: Complemental strand, 30002564 - 30002427
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||    
T  30002564 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaataaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactttt 30002467  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||| |||||||| |||||| |||||||||| |||||||||    
T  30002466 tcagaaaagtcaatttcataactgcaccgtagaagctccc 30002427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 6864296 - 6864460
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||| ||| ||||   ||||||| |||||| ||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||    
T  6864296 caacgataaaataatatttgtaagttcaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 6864395  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | ||||||||||||||||||||||||| |||  |||||||||||| |||||||||    
T  6864396 aacattaa--aatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctccc 6864460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 17272251 - 17272389
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||| || || ||| |||||||||||||||||||||| |||| ||||||||||||||    
T  17272251 caagatgttgcaagcattactagatgaattactattgatcattaatcggtaatgaacgatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 17272348  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||||| ||||||||||||||||| |||||||||    
T  17272349 ttcaaataagtcaatttcatgactgcaccgtagaagctccc 17272389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 19089404 - 19089239
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  19089404 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 19089305  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || | ||||  | | |||||||||||| |||||||||||| |||| |||||||||||| |||||||||    
T  19089304 aatcgttaa--aatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctccc 19089239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 34361442 - 34361277
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||| || || ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  34361442 caacgataaaatagtacctataagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 34361343  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  34361342 aaacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 34361277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 47254028 - 47254165
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  47254028 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaatcatt-aaga-ttaaaattaactttt 47254125  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||| ||| |||||| |||||| |||||||||    
T  47254126 tcaaaaaagtcagtttgatgactccaccgtagaagctccc 47254165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 55241055 - 55240891
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||||||||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||    
T  55241055 caacgataaaatagtacatgtaagtccaagatgttgcaaacattactagataaattactattaatcattaatcaataatcaacaatttaaaaatgaatca 55240956  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| |||||||||| |||||||||||||||| |||||| |||||||||| |||| ||||    
T  55240955 aacatt-aaga-ttaaaattaaatttttcaaaaaagtcagtttcataactgcaccgtagaagttccc 55240891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 23431842 - 23431980
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||| ||||| |||||||||||||||||||| ||| || ||||||||||||||| ||||||||||||  | ||||||||||||||    
T  23431842 caagatgttgcaagcattagtagatgaattactattgatcattaattagtaatcaacaatttaaaaatgcatcaaacattaa--aattaaaattaacttt 23431939  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||||||||||||| || |||||||||    
T  23431940 ttcaaaaaagtcagtttcatgactgcactgtagaagctccc 23431980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 50764980 - 50765143
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  50764980 tcaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 50765079  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    ||||||| |||| |||||||||||||||| ||||||||   |||||||| |||||||| |||||||    
T  50765080 aaacatt-aaga-ttaaaattaacttttttaaaaaagtttgtttcatgattgcaccgtagaagctc 50765143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 33816440 - 33816302
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||  || ||||||||||||||||||| |||||| |||| | ||||||||||||    
T  33816440 caagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcgaacatt-aaga-tcaaaattaacttt 33816343  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| |||||||| ||| |||||||||    
T  33816342 ttcaaaaaagtcagtttcctgactgcatcgtagaagctccc 33816302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 3042879 - 3043043
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| || || |||||| ||||||||||| ||||| ||||||| |||||||||| || |||||||||||||||||||    
T  3042879 tcaacgataaaatagtacatgtaagtccaacatgttgcaagcattactagatgaattagtattgattattaatcagtaatcaacaatttaaaaatgaatc 3042978  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  3042979 aaacattaa--aatcaaaattaactttttcaaaaaagtcaatttcttgactgcaccgtagaagctcc 3043043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 39400294 - 39400423
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    ||||||| |||||| ||||||||||| ||| |||||||||||||||||||  || |||||||||||||||||||||||||| |||| |||||||||||||    
T  39400294 tcaagatgttgcaagcattactagatgaatgactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactt 39400391  T
Q  141 tttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||||||| ||||||||||| |||||    
T  39400392 tttcaaaaaagtcagtttcatgactggaccgt 39400423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 23761358 - 23761485
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||||| |||||||||||||||||| || || ||||||||||||||||||||||| |||| ||||||||||||||    
T  23761358 caagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaataatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 23761455  T
Q  142 ttcaaaaaagtcactttcatgactgcaccg 171  Q
    ||||||||||||| |||||||||| |||||    
T  23761456 ttcaaaaaagtcagtttcatgactacaccg 23761485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 32912531 - 32912365
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  32912531 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaat 32912432  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||  | | ||||| || |||||||||||||||| |||| ||||||||||||  ||||||||    
T  32912431 caaacattaa--aatcaaaatgaattttttcaaaaaagtcagtttcctgactgcaccgtaaaagctccc 32912365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 4598269 - 4598407
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||| ||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||| |||| ||||||||||| ||    
T  4598269 caagatgttgcaagcattattagattaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacatt 4598366  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||  ||||||||| ||||||||||||||||| |||||||||    
T  4598367 ttacaaaaagtcagtttcatgactgcaccgtagaagctccc 4598407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 19440572 - 19440434
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || || ||||||||||| ||||||||||| |||| | ||||||||||||    
T  19440572 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaataatttaaaaattaatcaaacatt-aaga-tcaaaattaacttt 19440475  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || |||||||||| |||| |||||||||||| |||||||||    
T  19440474 tttaaaaaagtcagtttcctgactgcaccgtagaagctccc 19440434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 25184400 - 25184538
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||| | ||||||||||||    
T  25184400 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaacttt 25184497  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||  |||||||||| | |||||||||    
T  25184498 ttcaaaaaagtcagttttctgactgcaccatagaagctccc 25184538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 172
Target Start/End: Original strand, 32592347 - 32592499
Alignment:
Q  20 acgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaa 117  Q
    |||||||||||||| |||||   ||||||| ||| || |||||||| || |||||||||||||| ||||||| | || ||||||||||||||||||||||    
T  32592347 acgataaaatagtacctgtaagttcaagatgttgaaagcattactaaatgaattactattgatcgttaatcaataatcaacaatttaaaaatgaatcaaa 32592446  T
Q  118 cattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  32592447 catt-aaga-ttaaaattaactttttcaaaaaagtcaattttatgactgcaccgt 32592499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 37663691 - 37663527
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  37663691 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 37663592  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | | ||||  | | |||||||||||| | |||||||||| |||| |||||| ||||| |||||||||    
T  37663591 atcgttaa--aatcaaaattaactttattaaaaaagtcaatttcctgactgtaccgtagaagctccc 37663527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 46888108 - 46887946
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||||    |||||| || ||| ||||||||||| |||||||||||||||||||||| | || ||||||||||||||||||||    
T  46888108 caacgataaaatagtacctgtaaatccaagatgttacaagcattactagatgaattactattgatcattaatcactaatcaacaatttaaaaatgaatca 46888009  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    || |||||  | | ||||||||||||||||||||||||| |||| ||| |||||||| |||||||    
T  46888008 aatattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgattgcaccgtagaagctc 46887946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 35020985 - 35020817
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactat----tgatcattaatcagtcattaacaatttaaaaatga 111  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||    |||||||||||| || || ||||||||||||||||    
T  35020985 caacgataaaatagtatctgtaagtccaagatattgcaaacattactagatgaattactatatattgatcattaatcggtaatcaacaatttaaaaatga 35020886  T
Q  112 atcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||| |||| | |||||||||||||| |||| ||||| |||  ||||| |||||| |||||||||    
T  35020885 atcaaacatt-aaga-tcaaaattaacttttttaaaagagtcagttttctgactacaccgtagaagctccc 35020817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 167
Target Start/End: Original strand, 33341658 - 33341808
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| ||| || ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  33341658 tcaacgataaaatagtacatgtaagtccaagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 33341757  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    ||||||| |||| |||||||||| ||||| |||||||||| | ||||||||||    
T  33341758 aaacatt-aaga-ttaaaattaatttttttaaaaaagtcagtatcatgactgc 33341808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 4205245 - 4205409
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||| ||||||| |||||||||| ||||| ||| ||| || || |||||||||||||||||    
T  4205245 caacgataaaatagtacatgtaagtccaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatca 4205344  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | |||||| |||||||||||||||||||| |||| |||||||||||| |||||||||    
T  4205345 aacattaa--aattaaaagtaactttttcaaaaaagtcagtttcttgactgcaccgtagaagctccc 4205409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 49 - 182
Target Start/End: Original strand, 26896381 - 26896513
Alignment:
Q  49 ttgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaa 147  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||| ||||||||  | | |||||||||||||| |||    
T  26896381 ttgcaaacattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatcgaacattaa--aatcaaaattaacttttttaaa 26896478  T
Q  148 aaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| |||||||||||| |||| ||||    
T  26896479 aaagtcaatttcctgactgcaccgtagaagttccc 26896513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 28002937 - 28002772
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||| ||||||||||||| ||||||||||||||||||||||   || |||||||||||||||||||    
T  28002937 tcaacgataaaatagtacatgtaagtccaagatgttgctaacattactagatgaattactattgatcattaatcaacaatcaacaatttaaaaatgaatc 28002838  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
     |||||| |||| | ||||||||||||||||||||||||| |||| ||||||||  || |||||||||    
T  28002837 gaacatt-aaga-tcaaaattaactttttcaaaaaagtcagtttcctgactgcagtgtagaagctccc 28002772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 32579706 - 32579871
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||| ||||    
T  32579706 tcaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatc 32579805  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| | |||||||| |||||||||||||||| |||  | |||||||||| ||| |||||    
T  32579806 aaacatt-aaga-tcaaaattaattttttcaaaaaagtcagttttctaactgcaccgtagaaactccc 32579871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 49376227 - 49376392
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||  ||| || |||||||| || |||||||||||||||||||||||| || || |||||||||||||||     
T  49376227 tcaacgataaaatagtacatgtaagtccaagaagttgaaagcattactaaatgaattactattgatcattaatcagtaatcaagaatttaaaaatgaatt 49376326  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  49376327 aaacatt-aaga-tcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 49376392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 50697503 - 50697644
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| |  |||||| ||| || ||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  50697503 caacgataaaatagtacctgtaattccaagatgttgtaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatca 50697602  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    ||||||||  | | |||||||| |||||||||||||||| ||||    
T  50697603 aacattaa--aataaaaattaattttttcaaaaaagtcagtttc 50697644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 154
Target Start/End: Complemental strand, 7152155 - 7152018
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||| ||||| |||||||||||||||||||||| | || |||||||||||||||||||    
T  7152155 tcaacgataaaatagtacctgtaagtccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatc 7152056  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    ||||||| |||| | |||| ||||||||||||||||||||    
T  7152055 aaacatt-aaga-tgaaaaataactttttcaaaaaagtca 7152018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 25701007 - 25700842
Alignment:
Q  17 tcaacgataaaatagtatctgtag-tc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||||| |||  || ||||| |||||| ||||  ||||| |||||||||||||||||||||| | ||  ||||||||||||||||||    
T  25701007 tcaacgataaaatagtatccgtaaatctaagattttgcaagcattgttagatgaattactattgatcattaatcaataatgtacaatttaaaaatgaatc 25700908  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| | ||||||||||||||||||||||||| |||| | |||||||||| ||| |||||    
T  25700907 aaacatt-aaga-tcaaaattaactttttcaaaaaagtcaatttcctaactgcaccgtagaaactccc 25700842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 154
Target Start/End: Complemental strand, 35025515 - 35025381
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    |||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||    
T  35025515 aacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatcaacaatttaaaaatgaatcaa 35025416  T
Q  117 acattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    ||||||||   | |||||||||||||||| ||||||||    
T  35025415 acattaaa---tcaaaattaactttttcataaaagtca 35025381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 1815562 - 1815693
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||||    |||||| |||||||||||||||||| |||||| ||||||||||||||||| || ||||||||||||||||||||    
T  1815562 caacgataaaatagtacctgtaaatccaagatgttgcaaacattactagatgaattacaattgatcattaatcagtaatcaacaatttaaaaatgaatca 1815661  T
Q  116 aacattaaagatttaaaattaactttttcaaaaa 149  Q
    |||||| |||| | |||||||||||||| |||||    
T  1815662 aacatt-aaga-tcaaaattaacttttttaaaaa 1815693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 17167974 - 17168138
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||| ||||||| |||||||||| ||||||||| ||| || || |||||||||||||||||    
T  17167974 caacgataaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcattaattagtaatcaataatttaaaaatgaatca 17168073  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | |||||| ||| |||||||||||||||| |||| | |||||||||| ||| |||||    
T  17168074 aacattaa--aattaaaagtaattttttcaaaaaagtcagtttctttactgcaccgtagaaactccc 17168138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 17173551 - 17173715
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||| ||||||| |||||||||| ||||| ||| ||| || || |||||||||||||||||    
T  17173551 caacgataaaatagtacatgtaagtctaagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaatgaatca 17173650  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | |||||| ||| |||||||||||||||| |||| |||||||||||| ||| |||||    
T  17173651 aacattaa--aattaaaagtaattttttcaaaaaagtcagtttcttgactgcaccgtagaaactccc 17173715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 879493 - 879334
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||||| |||||||||||||| ||| || |||||||||||||||||||||||||    
T  879493 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattattattgatcattaataagtaatcaacaatttaaaaatgaatcaaacat 879394  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| | ||||||||||||||  ||||||||| |||  ||||| |||| | |||||||||    
T  879393 t-aaga-tcaaaattaactttttttaaaaagtcagttttctgactacaccatagaagctccc 879334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 55477815 - 55477734
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaa 123  Q
    |||||| |||||| ||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  55477815 caagatgttgcaagcattactagatgaattactattaatcattaatcagtaattaacaatttaaaaatgaatcaaacattaa 55477734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 27396910 - 27397029
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| ||||||||||||||||||||  || || |||||||||||||||||||||||||| |||| ||||||||||||||||  |||    
T  27396910 ttgcaagcattactagatgaattactattgatcattaat--gtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactttttttaaa 27397005  T
Q  149 aagtcactttcatgactgcaccgt 172  Q
    || ||| |||||||| ||||||||    
T  27397006 aaatcagtttcatgattgcaccgt 27397029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 49 - 150
Target Start/End: Complemental strand, 46884031 - 46883932
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||||||||  | | |||||||| ||||||||||    
T  46884031 ttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaa--aataaaaattaattttttcaaaa 46883934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 42 - 140
Target Start/End: Complemental strand, 34948019 - 34947923
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    |||||| |||||| ||||||||||| || ||||||||||| ||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||    
T  34948019 caagatgttgcaagcattactagatgaaatactattgatcgttaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactt 34947923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 42200017 - 42200155
Alignment:
Q  42 caagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    |||||| |||||| ||||||||||| ||| ||||| || |||||||||||| || || ||||||||||| |||||||||| |||    | ||||||||||    
T  42200017 caagatgttgcaagcattactagatgaatatactactgttcattaatcagtaatcaataatttaaaaattaatcaaacatcaaa---atcaaattaactt 42200113  T
Q  141 tttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||| |||| |||| ||| |||||||| |||||||||    
T  42200114 tttcaaaaaggtcaatttcctgattgcaccgtagaagctccc 42200155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 58 - 182
Target Start/End: Complemental strand, 5047874 - 5047752
Alignment:
Q  58 ttactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactt 157  Q
    ||||||||| ||||| ||||||||| ||||||   || ||||||||||||||||||| ||||||||  | | |||||||| |||||||||||||||  ||    
T  5047874 ttactagataaattattattgatcagtaatcaacaataaacaatttaaaaatgaatcgaacattaa--aatcaaaattaattttttcaaaaaagtctgtt 5047777  T
Q  158 tcatgactgcaccgttgaagctccc 182  Q
    || ||||||||||||  ||||||||    
T  5047776 tcctgactgcaccgtaaaagctccc 5047752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 182
Target Start/End: Original strand, 38012568 - 38012687
Alignment:
Q  61 ctagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttca 160  Q
    |||||| |||||||||||||||||||||||  || |||||||||||||| |||| |||||| |||| | ||||||||||||||||||||| | | ||||     
T  38012568 ctagatgaattactattgatcattaatcagcaatcaacaatttaaaaataaatcgaacatt-aaga-tcaaaattaactttttcaaaaaaattagtttcc 38012665  T
Q  161 tgactgcaccgttgaagctccc 182  Q
    ||||||||| ||  ||||||||    
T  38012666 tgactgcactgtaaaagctccc 38012687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 169
Target Start/End: Original strand, 9139516 - 9139639
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||  |||||||||||||||||||||| | ||    ||||||||||||||||||||||| |||| | | ||||||||||    
T  9139516 caagatgttgcaagcattactagacgaattactattgatcattaatcaataat--ctaatttaaaaatgaatcaaacatt-aaga-tcataattaacttt 9139611  T
Q  142 ttcaaaaaagtcactttcatgactgcac 169  Q
    | ||||||||||| |||| | |||||||    
T  9139612 tccaaaaaagtcagtttcctcactgcac 9139639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 56 - 154
Target Start/End: Complemental strand, 4934123 - 4934026
Alignment:
Q  56 cattactagatcaattactattgatcattaatcagtcattaacaattt-aaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    ||||| ||||| |||| ||||| ||||||||||||| || || ||||| |||||| ||| ||||||||| |||  ||||||||||| |||||||||||||    
T  4934123 cattaatagatgaatttctattaatcattaatcagtaatcaaaaattttaaaaataaattaaacattaa-gatc-aaaattaacttgttcaaaaaagtca 4934026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 4015737 - 4015875
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||    
T  4015737 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 4015834  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| ||||||||||||||||| |||||||||    
T  4015835 ttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 4015875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 21193884 - 21194023
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    ||||||| |||||| |||||||| || ||||||||||||| |||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||    
T  21193884 tcaagatgttgcaaccattactaaatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactt 21193981  T
Q  141 tttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||| ||||||||||||||||| |||||||||    
T  21193982 tttcaaaaaagtcagtttcatgactgcaccgtagaagctccc 21194023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 33378710 - 33378545
Alignment:
Q  17 tcaacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  ||||   ||||||| |||||||||||||||||| |||||||||||||||||||||| | || ||| |||||||||||||||    
T  33378710 tcaacgataaaatagtacatgtaagttcaagatgttgcaaacattactagatgaattactattgatcattaatcaataatcaacgatttaaaaatgaatc 33378611  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| |||||||||| |||||||||||||||| |||| |||||||||||| |||||||||    
T  33378610 aaacatt-aaga-ttaaaattaattttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 33378545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 50 - 182
Target Start/End: Original strand, 36012425 - 36012556
Alignment:
Q  50 tgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaa 149  Q
    ||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||||||||||| ||| ||| ||||||||||||||||    
T  36012425 tgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaataaatcaaacattaaa-attaaaatttaactttttcaaaaa 36012523  T
Q  150 agtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||| ||||||||||||||||| |||||||||    
T  36012524 agtcagtttcatgactgcaccgtagaagctccc 36012556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 181
Target Start/End: Original strand, 39282903 - 39283067
Alignment:
Q  17 tcaacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||| |||||||||||||||||    ||| || |||||| ||||||||||| |||||||||| ||||||||||||| || |||||||||||||||||||    
T  39282903 tcaacaataaaatagtatctgtaaatccaaaatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatc 39283002  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  39283003 aaacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctcc 39283067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 33698405 - 33698566
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| |||||||||||| ||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||    
T  33698405 caacgataaaatagtacctgtaagtctaagatattgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatca 33698504  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
      |||| |||| ||||||||||||||||||||||||||| |||||| | |||||||| ||||||    
T  33698505 gtcatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcataaatgcaccgtagaagct 33698566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 46297686 - 46297522
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||| |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||    
T  46297686 caacgataaaatagtatttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatca 46297587  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | |||||||||||||| |||||||||| |||  |||||||||||| |||||||||    
T  46297586 aacatt-aaga-tcaaaattaacttttttaaaaaagtcagttttttgactgcaccgtagaagctccc 46297522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 42505999 - 42505837
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  42505999 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 42505900  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    | | ||||  | | |||||||||||| |||||||||||| |||| |||||||||||| |||||||    
T  42505899 atcgttaa--aatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctc 42505837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 22622643 - 22622478
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||    
T  22622643 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaactatttaaaaatgaatc 22622544  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||||||||||||||||||| ||| |||| ||||||||||||  ||||||||    
T  22622543 aaacattaa--aatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtaaaagctccc 22622478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 37203319 - 37203484
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||| |||||||||||| ||||| ||| || |||| |||| ||||||||||| |||||| ||||||||||||| ||| || |||||||||||||||||||    
T  37203319 tcaatgataaaatagtacctgtaagtccaatatatcgcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatc 37203418  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  37203419 aaacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 37203484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 26941184 - 26941020
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  26941184 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 26941085  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | | ||||  | | ||||||||||||||||||||||||| |||  |||||||||||| |||||||||    
T  26941084 agcgttaa--aatcaaaattaactttttcaaaaaagtcagttttctgactgcaccgtagaagctccc 26941020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 29099599 - 29099763
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    ||||||||||||||| || || ||| ||||| |||||| ||||||||||| |||||| ||||||||||||||||  || |||||||||||||||||||||    
T  29099599 aacgataaaatagtacctttaagtccaagatgttgcaagcattactagatgaattaccattgatcattaatcagcaatcaacaatttaaaaatgaatcaa 29099698  T
Q  117 acattaaagatttaaaattaactttttc-aaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||    ||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  29099699 acattaa--tattaaaattaactttttcaaaaaaagtcagtttcatgactgcaccgtagaagctccc 29099763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 40552183 - 40552019
Alignment:
Q  18 caacgataaaatagtatctgta-gtcaa-gatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| | ||| |||||| ||||||||||| ||||||||||||| |||||||||| || ||||||||||||||||||||    
T  40552183 caacgataaaatagtacatgtaagtccatgatgttgcaagcattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatca 40552084  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | ||||||||||||||||||||||||| ||||  ||||||||||| |||||||||    
T  40552083 aacatt-aaga-tcaaaattaactttttcaaaaaagtcagtttccagactgcaccgtagaagctccc 40552019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 21009726 - 21009561
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  21009726 caacgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 21009627  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | |||||||| ||||| |||||||||| |||| |||||||||||| ||| |||||    
T  21009626 aaacattaa--aatcaaaattaatttttttaaaaaagtcagtttcctgactgcaccgtagaaactccc 21009561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 51 - 182
Target Start/End: Original strand, 37157995 - 37158124
Alignment:
Q  51 gcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaa 150  Q
    |||| ||||||||||| |||||| ||||||||||||| ||| || ||||||||||||||||||||||||||||  | | |||||||||||||||||||||    
T  37157995 gcaagcattactagatgaattaccattgatcattaatgagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaactttttcaaaaaa 37158092  T
Q  151 gtcactttcatgactgcaccgttgaagctccc 182  Q
    |||| |||| |||||||||||| |||||||||    
T  37158093 gtcagtttcctgactgcaccgtagaagctccc 37158124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 47481773 - 47481937
Alignment:
Q  17 tcaacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    |||||||||||||||||  ||||   ||||||| |||||| ||||||||||| ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  47481773 tcaacgataaaatagtacttgtaagttcaagatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaat 47481872  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    ||||||||||  | | ||||||||||||||||||||| ||| |||| |||||| ||||| |||||||    
T  47481873 caaacattaa--aatcaaaattaactttttcaaaaaaatcaatttcctgactgtaccgtagaagctc 47481937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 182
Target Start/End: Original strand, 48355198 - 48355357
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||||||||| ||| ||||| ||||||  |||||||||| ||||| |||||||||||||||||| |  |||||||||||||||||||||||||    
T  48355198 ataaaatagtatctgtaagtccaagatgttgcaagtattactagatgaattattattgatcattaatcagtaagcaacaatttaaaaatgaatcaaacat 48355297  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| | ||||||||||||||||||||||||| |||| | |||||||| | |||||||||    
T  48355298 t-aaga-tcaaaattaactttttcaaaaaagtcaatttcctaactgcaccatagaagctccc 48355357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 14586578 - 14586440
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||| ||||||||||||||| || |||||||||||||| ||||||||||| |||| |||||||||| |||    
T  14586578 caagatgttgcaagcattactagataaattactactgatcattaatcagtaatcaacaatttaaaaataaatcaaacatt-aaga-ttaaaattaatttt 14586481  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| ||||| || |||||| | |||||||||    
T  14586480 ttcaaaaaagtcagtttcacgagtgcaccatagaagctccc 14586440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 52040847 - 52040682
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||||||||||||||| ||| | |||||||||||||| ||| || |||||||||||||||||||    
T  52040847 tcaacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaatgattattgatcattaatgagtaatcaacaatttaaaaatgaatc 52040748  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| | ||||||||||||| ||||||||||| ||  ||||||||| ||| |||||||||    
T  52040747 aaacatt-aaga-tcaaaattaacttttccaaaaaagtcagttgtatgactgcagcgtagaagctccc 52040682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 1089971 - 1090099
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||| | || |||||||||||||||||||||||||| |||| | ||||||||||||    
T  1089971 caagattttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaacttt 1090068  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgt 172  Q
    || |||||||||| |||| ||||| ||||||    
T  1090069 tttaaaaaagtcagtttcctgactacaccgt 1090099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 187
Target Start/End: Original strand, 3362540 - 3362676
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||| ||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||  | ||||||||||| |||||    
T  3362540 ttgcaagcattactggatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa-gatc-ataattaacttttccaaaa 3362637  T
Q  149 aagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    |||||| |||| |||||||||| | ||||||||| ||||    
T  3362638 aagtcaatttcctgactgcaccatagaagctccctaatt 3362676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 154
Target Start/End: Complemental strand, 11357305 - 11357169
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  11357305 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 11357206  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    |||||| |||| | ||||||||||||| |||||||||||    
T  11357205 aacatt-aaga-tcaaaattaacttttccaaaaaagtca 11357169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 63 - 180
Target Start/End: Complemental strand, 20373140 - 20373025
Alignment:
Q  63 agatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatg 162  Q
    |||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||| |||| ||    
T  20373140 agatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctg 20373043  T
Q  163 actgcaccgttgaagctc 180  Q
    |||||||| | |||||||    
T  20373042 actgcaccatagaagctc 20373025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 54506059 - 54506214
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| | || ||| || || |||||| ||||||||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  54506059 caacgataaaatagtatttataagtccaaaatgttgcaagcattactagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 54506158  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||  | | ||||||||||||||||||||| ||| |||| ||||||||||||    
T  54506159 aaacattaa--aatcaaaattaactttttcaaaaaaatcaatttcctgactgcaccgt 54506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 164
Target Start/End: Complemental strand, 44186414 - 44186295
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||| |||    
T  44186414 aagatgttgcaagcattactagataaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacattt 44186317  T
Q  143 tcaaaaaagtcactttcatgac 164  Q
    || ||||| ||| |||||||||    
T  44186316 tcgaaaaaatcaatttcatgac 44186295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 44891776 - 44891899
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| ||||||| |||||||||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  44891776 aagatgttgcaagcattactagatgaattactgttgatcattaatcagtaatcaacaatttaaaaatgaatcaatcatt-aaga-ttaaaattaactttt 44891873  T
Q  143 tcaaaaaagtcactttcatgactgca 168  Q
    | |||||||||| ||| |||||||||    
T  44891874 ttaaaaaagtcagtttgatgactgca 44891899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 41 - 182
Target Start/End: Complemental strand, 53229051 - 53228912
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    ||||||| |||||| ||||||||||| ||||| |||||||||||||||| | || |||||||||||||||||||||||||| |||| | |||||||||||    
T  53229051 tcaagatgttgcaagcattactagatgaattagtattgatcattaatcaataatcaacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaactt 53228954  T
Q  141 tttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || ||||||| ||| || | |||||||||||| |||||||||    
T  53228953 ttccaaaaaaatcagttgcctgactgcaccgtagaagctccc 53228912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 40936252 - 40936389
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| ||||||||||||||||||||| || || |||||||||||||| |||||| |||| |||| || ||||||||||||    
T  40936252 aagatgttgcaagcattactagataaattactattgatcattaatcggtaatcaacaatttaaaaataaatcaatcatt-aaga-ttgaaattaactttt 40936349  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||| ||| ||| | ||||||| |||||||||    
T  40936350 tcaaaaaagtcaatttgatgtccgcaccgtagaagctccc 40936389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 2008184 - 2008355
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagt---cattaa----caatttaaaaa 108  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| || || ||||||||||||||||||   ||||||    |||||||||||    
T  2008184 caacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaaataatattgatcattaatcagtaatcattaatcaacaatttaaaaa 2008283  T
Q  109 tgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||| |||||||| ||||||||  ||||||||    
T  2008284 tgaatcaaacattaa-gatt-aaaattaactttttcaaaaaagtcagtttcatgattgcaccgtaaaagctccc 2008355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 24708039 - 24707890
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||  |||||| ||||| ||||| |||||||||| ||||||||||||| || ||||||||||||||||||||    
T  24708039 caacgataaaatagtacatgtaagtccaagaagttgcaagcattattagataaattactattaatcattaatcagtaatcaacaatttaaaaatgaatca 24707940  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    ||||||||  | ||||||||||||||||||||||| ||| |||  |||||||    
T  24707939 aacattaa--aattaaaattaactttttcaaaaaaatcaattttctgactgc 24707890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 7327406 - 7327250
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||| ||||||||||||| || ||||||||||||||||||||    
T  7327406 caacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatca 7327307  T
Q  116 aacattaaagatttaaaattaacttttt--caaaaaagtcactttcatgactgcaccgt 172  Q
    |  ||| |||| ||||||||||||||||   |||||||||| |||||| ||||||||||    
T  7327306 attatt-aaga-ttaaaattaacttttttaaaaaaaagtcaatttcataactgcaccgt 7327250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 25580018 - 25580155
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||| |  || ||||||||||||||||| ||| |||| |||| |||| ||||||||||    
T  25580018 aagatattgcaagcattactagatgaattactattgatcattaatccgcaatcaacaatttaaaaatgaaccaatcatt-aaga-ttaagattaactttt 25580115  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||||||||| ||||| |||||||| || ||| |||||    
T  25580116 ttaaaaaagtcaatttcaagactgcactgtagaaactccc 25580155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 32373721 - 32373886
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||| ||||||||||||||||||| || |||||||| |||||||||     
T  32373721 tcaacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaatttctattgatcattaatcagtaatcaacaattt-aaaatgaatt 32373819  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcccc 183  Q
     | || | |||| ||||||||||||||||||||||| ||| ||||| ||||| ||||| ||||||||||    
T  32373820 catcaat-aaga-ttaaaattaactttttcaaaaaattcagtttcacgactgtaccgtagaagctcccc 32373886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 184
Target Start/End: Complemental strand, 43975816 - 43975650
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||||| |||||||||||||||||  || |||||||||||||||||||     
T  43975816 caacgataaaatagtacttgtaagtccaagattttgcaagcattactagatgaattaatattgatcattaatcagcaatcaacaatttaaaaatgaatcg 43975717  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcccca 184  Q
    |||||| |||| | || ||||| |||||||||| ||||| |||  |||||||||||| ||| |||||||    
T  43975716 aacatt-aaga-tcaagattaattttttcaaaagagtcagttttctgactgcaccgtagaaactcccca 43975650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 169
Target Start/End: Complemental strand, 4761539 - 4761421
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    ||||||||||||| |||| |||||||||| ||||||||||||  || |||||||| |||||||||||||||||||  | | |||||||||||||| ||||    
T  4761539 ttgcaaacattaccagatgaattactattaatcattaatcagaaatcaacaatttgaaaatgaatcaaacattaa--aatcaaaattaactttttaaaaa 4761442  T
Q  149 aagtcactttcatgactgcac 169  Q
    |||| |||||| ||| |||||    
T  4761441 aagtaactttcttgaatgcac 4761421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 22445989 - 22445838
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| || || ||| || || ||||||  |||||| ||| |||||||||||||||||||||||| || ||||||||||| ||||||||    
T  22445989 caacgataaaatagtacctttaagtccaaaatgttgcaagtattactggatgaattactattgatcattaatcagtaatcaacaatttaaatatgaatca 22445890  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcac 169  Q
    |||||||| |||  | ||||||||||| ||||||||||| |||| |||||||||    
T  22445889 aacattaa-gatc-ataattaacttttccaaaaaagtcagtttcctgactgcac 22445838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 182
Target Start/End: Original strand, 11467115 - 11467226
Alignment:
Q  62 tagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcat 161  Q
    ||||| ||||||||||||||||||||||       |||||||||||||||||||| ||||||  ||  ||||||||||||||||||||||||| ||| ||    
T  11467115 tagatgaattactattgatcattaatca-------acaatttaaaaatgaatcaatcattaagaat--aaaattaactttttcaaaaaagtcagtttgat 11467205  T
Q  162 gactgcaccgttgaagctccc 182  Q
    ||||||||||| |||||||||    
T  11467206 gactgcaccgtagaagctccc 11467226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 35844579 - 35844663
Alignment:
Q  96 aacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||| ||||||||||||||   ||||||||||||||||||||||||||| |||||| ||||||||||  ||||||||    
T  35844579 aacaatttaaaaataaatcaaacattaaaa--ttaaaattaactttttcaaaaaagtcaatttcataactgcaccgtaaaagctccc 35844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 68 - 182
Target Start/End: Complemental strand, 11357030 - 11356918
Alignment:
Q  68 aattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgc 167  Q
    |||||||||| ||||||||| ||| || ||||||||||||||||||| |||||| |||| | ||||||||||||||||||||||||| ||   |||||||    
T  11357030 aattactattcatcattaattagtaatcaacaatttaaaaatgaatccaacatt-aaga-tcaaaattaactttttcaaaaaagtcagttgtctgactgc 11356933  T
Q  168 accgttgaagctccc 182  Q
    ||||| || ||||||    
T  11356932 accgtagatgctccc 11356918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 42 - 148
Target Start/End: Original strand, 22451246 - 22451350
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||||| |||||||||||||||||  || || |||||||||||||||| |||||| |||| | ||||||||||||    
T  22451246 caagatgttgcaagcattactagatgaattattattgatcattaatcagcaatcaaaaatttaaaaatgaatcgaacatt-aaga-tcaaaattaacttt 22451343  T
Q  142 ttcaaaa 148  Q
    |||||||    
T  22451344 ttcaaaa 22451350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 111
Target Start/End: Complemental strand, 46994580 - 46994490
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatga 111  Q
    ||||||||||| ||||| ||| |||||||||||| ||||||||||| |||||||||||||||||||||||  || ||||||||||||||||    
T  46994580 ataaaatagtacctgtaagtccaagatattgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatga 46994490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 27480246 - 27480175
Alignment:
Q  52 caaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaa 123  Q
    ||||||||||||||| ||||||||||||| |||||||||  || ||||||||||||||||||| ||||||||    
T  27480246 caaacattactagatgaattactattgattattaatcagcgatcaacaatttaaaaatgaatcgaacattaa 27480175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 38591976 - 38592101
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||| || |  |||||||||||||||||||||||| || |||||||||||||||||||               ||||||||||||    
T  38591976 caagatgttgcaagcattattaaacaaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc---------------aaaattaacttt 38592060  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| | ||||||||||||||||||||    
T  38592061 ttcaaaaaagtcaatttcttaactgcaccgttgaagctccc 38592101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 34133187 - 34133288
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||| | ||||| |||| || || ||||||||||||||||||||    
T  34133187 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactagtaatcatgaatcggtaatcaacaatttaaaaatgaatca 34133286  T
Q  116 aa 117  Q
    ||    
T  34133287 aa 34133288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 159
Target Start/End: Complemental strand, 24488861 - 24488744
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    ||||||| |||||| |||||||||||  ||||||||| ||||| ||||| | || || |||||||||||||||||||||||||    |||||||||||||    
T  24488861 tcaagatgttgcaagcattactagatgcattactattaatcatgaatcaataatcaataatttaaaaatgaatcaaacattaa--tattaaaattaactt 24488764  T
Q  141 tttcaa-aaaagtcactttc 159  Q
    ||| || |||||||| ||||    
T  24488763 tttaaataaaagtcaatttc 24488744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 19 - 154
Target Start/End: Original strand, 29164062 - 29164190
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    |||||||||||||||  |||| ||| ||||| || ||| ||||||||||| |||||||||||||||||||||       |||||||||||||| ||||||    
T  29164062 aacgataaaatagtacttgtaagtctaagatgttacaagcattactagatgaattactattgatcattaatc-------aacaatttaaaaataaatcaa 29164154  T
Q  117 acattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    ||||| |||| |||||||||||||||| | ||||||||    
T  29164155 acatt-aaga-ttaaaattaacttttttagaaaagtca 29164190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 51212690 - 51212537
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||| |   || |||||||||||||||||      ||    
T  51212690 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaattaaaaatcaacaatttaaaaatgaa------at 51212597  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| | |||||||||||||||||||| |||| |||  |||||||||| | |||||||||    
T  51212596 t-aaga-tcaaaattaactttttcaaaaatgtcagttttctgactgcaccatagaagctccc 51212537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 150
Target Start/End: Complemental strand, 3655100 - 3654991
Alignment:
Q  42 caagatattgcaaacattactagatc--aattactattgatcattaatcagtcattaacaatttaaaaat-gaatcaaacattaaagatttaaaattaac 138  Q
    |||||| |||||| |||||||||||   ||||||||||||| |||||||||| || ||||||||||||||  |||||||||||||  | | |||||||||    
T  3655100 caagatgttgcaagcattactagatatgaattactattgattattaatcagtaatcaacaatttaaaaataaaatcaaacattaa--aatcaaaattaac 3655003  T
Q  139 tttttcaaaaaa 150  Q
     |||||||||||    
T  3655002 attttcaaaaaa 3654991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 42 - 91
Target Start/End: Complemental strand, 54828599 - 54828550
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagt 91  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  54828599 caagatgttgcaagcattactagataaattactattgatcattaatcagt 54828550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 124
Target Start/End: Original strand, 50475089 - 50475178
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatca-------ttaatcagtcattaacaatttaaaaatgaatcaaacattaaa 124  Q
    |||||| |||||| ||||||||||| ||||| |||||||||       ||||||||| || || ||||||||||||||||||||||||||    
T  50475089 caagatgttgcaagcattactagatgaattagtattgatcattaatcattaatcagtaatcaataatttaaaaatgaatcaaacattaaa 50475178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 177
Target Start/End: Complemental strand, 23165333 - 23165291
Alignment:
Q  135 taactttttcaaaaaagtcactttcatgactgcaccgttgaag 177  Q
    |||||||||||||||||||| ||||||||||||||||| ||||    
T  23165333 taactttttcaaaaaagtcaatttcatgactgcaccgtagaag 23165291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 34133320 - 34133373
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    ||||||||||||||||||||||||||| |||| | |||||||| | ||||||||    
T  34133320 ttaaaattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 34133373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 178
Target Start/End: Complemental strand, 31706531 - 31706488
Alignment:
Q  135 taactttttcaaaaaagtcactttcatgactgcaccgttgaagc 178  Q
    |||||||||||||||||||| |||  ||||||||||||||||||    
T  31706531 taactttttcaaaaaagtcagttttttgactgcaccgttgaagc 31706488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 11835556 - 11835494
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattga 79  Q
    |||||||||||||||| |||| ||| ||||| ||||||||||||||| || ||||||||||||    
T  11835556 aacgataaaatagtatttgtaagtccaagatgttgcaaacattactaaatgaattactattga 11835494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 45174836 - 45174889
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||||||||||||||||||||| || ||| |||||| |||||  ||||||||    
T  45174836 ttaaaattaactttttcaaaaaagccagtttgatgactacaccgaagaagctcc 45174889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 96; Significance: 5e-47; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 15992454 - 15992301
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| | ||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  15992454 caacgataaaatagtaccggtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatca 15992355  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccg 171  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  15992354 aacatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcatgactgcaccg 15992301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 38528155 - 38527982
Alignment:
Q  14 atatcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatga 111  Q
    ||||||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  38528155 atatcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatga 38528056  T
Q  112 atcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    ||||||||||||  | | ||||||||||||||||||||| ||| |||| |||||||||||| ||||||||| ||||    
T  38528055 atcaaacattaa--aatcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaagctccctaatt 38527982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 39573098 - 39573235
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||    
T  39573098 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 39573195  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    ||||||||||||| |||||| |||||||||| ||||||||    
T  39573196 ttcaaaaaagtcagtttcataactgcaccgtagaagctcc 39573235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 178
Target Start/End: Complemental strand, 2888360 - 2888199
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| ||||| ||| ||||| || ||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  2888360 tcaacgataaaatagtacctgtaagtccaagatgttacaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 2888261  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagc 178  Q
    |||||||||  | ||||||||||||||||||||||||||| |||  |||||||||||| |||||    
T  2888260 aaacattaa--aattaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagc 2888199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 25669836 - 25669997
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| || || |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||    
T  25669836 tcaacgataaaatagtacatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 25669935  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagc 178  Q
    |||||||||  | ||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  25669936 aaacattaa--aattaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagc 25669997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 27330591 - 27330729
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||| |||||||||||||||||||||| |||| ||||||||||||||    
T  27330591 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatgaacgatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 27330688  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||||| ||||||||||||||||| |||||||||    
T  27330689 ttcaaacaagtcaatttcatgactgcaccgtagaagctccc 27330729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 19120147 - 19120284
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||| |||| |||||||||||||||    
T  19120147 aagatgttgcaagcattactagatgaattactattgatcattaatcagtgatcaacaatttaaaaatgaatcaatcatt-aaga-ttaaaattaactttt 19120244  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||| ||||||||||||||| | |||||||||    
T  19120245 tcaaaaaagtcagtttcatgactgcaccttagaagctccc 19120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 42343009 - 42343146
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||||||||||    
T  42343009 aagatgttgcaagcattactagatgaattaccattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaactttt 42343106  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||| |||||||| ||||||||||||||||| |||||||||    
T  42343107 tcagaaaagtcagtttcatgactgcaccgtagaagctccc 42343146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 170
Target Start/End: Original strand, 699411 - 699563
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||||||||| ||| ||||| |||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||||||||||||||    
T  699411 caacgataaaatagtatctgtaagtccaagatgttgcaagcattactagatgaattactattgattattaatcagtaattaacaatttaaaaatgaatca 699510  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    |||||| |||| | ||||||||||||| ||||||||||| |||| ||||||||||    
T  699511 aacatt-aaga-tcaaaattaacttttccaaaaaagtcagtttcctgactgcacc 699563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 9200485 - 9200648
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||||| || ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  9200485 caacgataaaatagtatctataagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 9200584  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    ||  ||||  | |||||||||| |||||||||||| ||| ||||||||||||||||| ||||||||    
T  9200585 aaatttaa--aattaaaattaattttttcaaaaaaatcagtttcatgactgcaccgtagaagctcc 9200648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 25500840 - 25500676
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| || |||| |||||||||||||||| |||||||||||||||||||||||    
T  25500840 caacgataaaatagtacctgtaagtctaagatgttgcaagcattactagatgaaatactgttgatcattaatcagtaattaacaatttaaaaatgaatca 25500741  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || | | |||| ||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||    
T  25500740 aatact-aaga-ttaaaattaactttttcaaaaaaatcagtttcatgactgcaccgtagaagctccc 25500676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 31705500 - 31705362
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||||||||  | | ||||||||||||    
T  31705500 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aataaaaattaacttt 31705403  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| |||||||||||| ||| |||||    
T  31705402 ttcaaaaaagtcaatttcttgactgcaccgtagaatctccc 31705362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 18 - 180
Target Start/End: Original strand, 32563401 - 32563563
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| ||||||  |||||||||| ||||| |||||||||||||||||  |||||||||||||||||||||||    
T  32563401 caacgataaaatagtacatgtaagtctaagatgttgcaagaattactagataaattattattgatcattaatcagcaattaacaatttaaaaatgaatca 32563500  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctc 180  Q
    ||||||||  | ||||||||||||||||||||||||||| |||||| |||||||||| |||||||    
T  32563501 aacattaa--aattaaaattaactttttcaaaaaagtcagtttcataactgcaccgtagaagctc 32563563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 35511396 - 35511232
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  ||||   ||||||| |||||| |||||||| || |||||||||||||||||||||||| || ||||||||||||||||||||    
T  35511396 caacgataaaatagtacatgtaagttcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 35511297  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | |||||||||||||| |||||||||| |||| |||||||||||| |||||||||    
T  35511296 aacattaa--aatcaaaattaacttttttaaaaaagtcagtttcctgactgcaccgtagaagctccc 35511232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 43 - 182
Target Start/End: Original strand, 22019911 - 22020048
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| ||| || ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  22019911 aagatgttgtaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaatatt-aaga-ttaaaattaactttt 22020008  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||| ||||||||||||||||| |||| ||||    
T  22020009 tcaaaaaagtcagtttcatgactgcaccgtagaagttccc 22020048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 22255443 - 22255607
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| | ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  22255443 caacgataaaatagtacctgtaagtccaagatgttgcaagccttactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 22255542  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | |||||||||||||| |||||||||| |||| |||||| ||||| |||||||||    
T  22255543 aacattaa--aatcaaaattaactttttaaaaaaagtcagtttcctgactgtaccgtagaagctccc 22255607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 8437226 - 8437390
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| ||| |||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| |    
T  8437226 caacgataaaatagtacctgtaagtccaagatgttgaaaacattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatta 8437325  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || |||||  | | ||||||||||||||||||||||||| |||| |||||||| ||| || ||||||    
T  8437326 aatattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcatcgtagatgctccc 8437390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 22981054 - 22981218
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||| |||| ||| ||||| |||||| ||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||    
T  22981054 caacgataaaatagtatatgtaagtccaagatgttgcaatcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatca 22981153  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | ||||||||||||||  ||||||||| |||| |||||||||| | |||||||||    
T  22981154 aacatt-aaga-tcaaaattaactttttttaaaaagtcagtttcctgactgcaccatagaagctccc 22981218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 14409256 - 14409091
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| ||||||||||||||| || |||||||||||||||||| ||||  || |||||||||||||||||||    
T  14409256 tcaacgataaaatagtacttgtaagtccaagatgttgcaaacattactaaatgaattactattgatcattattcagcaatcaacaatttaaaaatgaatc 14409157  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
     ||||||||  | |||||||||| |||||||||||| ||| |||| |||||||||||| |||||||||    
T  14409156 gaacattaa--aattaaaattaaatttttcaaaaaaatcagtttcctgactgcaccgtagaagctccc 14409091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 24886374 - 24886500
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||| |||| | ||||||||||||    
T  24886374 caagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaacttt 24886471  T
Q  142 ttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||||||||| |||| ||||||||||    
T  24886472 ttcaaaaaagtcagtttcttgactgcacc 24886500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 28416439 - 28416301
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||| ||| ||||||||||||||||||||||   || ||||||||||||| |||||||||||| |||| ||||||||||||||    
T  28416439 caagatgttgcaagcattacttgatgaattactattgatcattaatcaacaatcaacaatttaaaaaagaatcaaacatt-aaga-ttaaaattaacttt 28416342  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||  |||||||||||||||| |||||||||    
T  28416341 ttcaaaaaagtcagcttcatgactgcaccgtagaagctccc 28416301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 36867022 - 36867192
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||| ||| |||| ||| ||||| |||||||||||||| ||| |||||||||| ||||| ||||||| || ||||||||||||||||||     
T  36867022 tcaacgataaaataatatttgtaagtccaagatgttgcaaacattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatt 36867121  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    ||||||| |||| |||||||||||||||| |||||||||| |||  |||||||||||| ||||||||| ||||    
T  36867122 aaacatt-aaga-ttaaaattaacttttttaaaaaagtcaattttctgactgcaccgtagaagctccctaatt 36867192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 8741800 - 8741647
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| || || |||||| ||| ||||||| || ||||||||||||||||||||| || |||||||||||||||||||    
T  8741800 tcaacgataaaatagtacatgtaagtccaaaatgttgcaagcatcactagatgaaatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 8741701  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||| |||| ||||||||||||||||||||||||||  |||||||||||||||    
T  8741700 aaacatt-aaga-ttaaaattaactttttcaaaaaagtctgtttcatgactgcacc 8741647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 40133645 - 40133810
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||| ||| |||| ||| ||||| |||||| ||||||| ||| |||||||||| ||||| ||||||| || ||||||||||||||||||     
T  40133645 tcaacgataaaataatatttgtaagtccaagatgttgcaagcattactggatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatt 40133744  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| ||||||||||||||||||||||||||| |||  |||||||||||| |||||||||    
T  40133745 aaacatt-aaga-ttaaaattaactttttcaaaaaagtcaattttctgactgcaccgtagaagctccc 40133810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 56 - 182
Target Start/End: Original strand, 43254156 - 43254280
Alignment:
Q  56 cattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcac 155  Q
    ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| | ||||||||||||| |||||||||||     
T  43254156 cattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaacttttccaaaaaagtcaa 43254253  T
Q  156 tttcatgactgcaccgttgaagctccc 182  Q
    |||| |||||||||| | |||||||||    
T  43254254 tttcctgactgcaccatagaagctccc 43254280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 17157919 - 17157781
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||||||||||  | | ||| || |||||    
T  17157919 caagatgttgcaagcattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaacttgacttt 17157822  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||| |||||| ||||| |||||||||    
T  17157821 ttcaaaaaagtcaatttcttgactgtaccgtagaagctccc 17157781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 35934183 - 35934321
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||| | ||||| |||||||||||||||||| || |||||||||||||||| |||||||||||  | ||||||||||||||    
T  35934183 caagatgttgcaagcattactagttgaattattattgatcattaatcagtaatcaacaatttaaaaatgattcaaacattaa--aattaaaattaacttt 35934280  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||| ||| |||||| |||||||||| ||| |||||    
T  35934281 ttcaaaaaaatcagtttcataactgcaccgtagaaactccc 35934321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 170
Target Start/End: Complemental strand, 22973970 - 22973844
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||    
T  22973970 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 22973873  T
Q  142 ttcaaaaaagtcactttcatgactgcacc 170  Q
    || |||||| ||| |||  ||||||||||    
T  22973872 ttaaaaaaaatcagttttctgactgcacc 22973844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 170
Target Start/End: Complemental strand, 31786560 - 31786408
Alignment:
Q  18 caacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||||    |||||| |||||| ||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||    
T  31786560 caacgataaaatagtacctgtaaatccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatca 31786461  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||||    | ||||||||||||||||||||||||| |||| ||| ||||||    
T  31786460 aacattaa--tatcaaaattaactttttcaaaaaagtcagtttcctgattgcacc 31786408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 7693509 - 7693628
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| ||||||||||| |||||||||||| || ||||||||||||||||||||||||||||  | |||||||||||||||    
T  7693509 aagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aattaaaattaactttt 7693606  T
Q  143 tcaaaaaagtcactttcatgac 164  Q
    | | |||||||| |||||||||    
T  7693607 ttagaaaagtcagtttcatgac 7693628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 33908494 - 33908657
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||  || ||||||||||||||||||||    
T  33908494 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagat-aattactattgatcattaatcagcaatcaacaatttaaaaatgaatca 33908592  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| | ||||||||||||||||||||||||| |||  | |||||||||| || ||||||    
T  33908593 aacatt-aaga-tcaaaattaactttttcaaaaaagtcagttttctaactgcaccgtagatgctccc 33908657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 43308569 - 43308410
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||  || ||||||||||||| |||||||| |     
T  43308569 ataaaatagtacctgtaagtcgaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaacgaatcaaatac 43308470  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||  | | ||||||||||||||||||||||||| |||| | |||||||| |||||||||||    
T  43308469 taa--aatcaaaattaactttttcaaaaaagtcagtttcctaactgcaccattgaagctccc 43308410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 5837842 - 5837968
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| ||||||| |||||||||||||| | || ||||||||||||||||||||| ||||||  | ||||||||||| ||    
T  5837842 caagatgttgcaagcattactagatgaattactgttgatcattaatcaataatcaacaatttaaaaatgaatcaatcattaa--aattaaaattaacctt 5837939  T
Q  142 ttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||||||||| ||| |||||||||||    
T  5837940 ttcaaaaaagtcagtttgatgactgcacc 5837968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 170
Target Start/End: Original strand, 15724779 - 15724901
Alignment:
Q  46 atattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttca 145  Q
    |||||| || ||||||||||| |||||||||| ||||||||||| | || ||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  15724779 atattgtaagcattactagatgaattactattaatcattaatcaataatcaacaatttaaaaatgaatcaaacattaaag--ttaaaattaactttttca 15724876  T
Q  146 aaaaagtcactttcatgactgcacc 170  Q
    ||||| | | |||||||||| ||||    
T  15724877 aaaaaattagtttcatgacttcacc 15724901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 42 - 182
Target Start/End: Original strand, 25889657 - 25889795
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| ||| || ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||| ||||||| |||| | ||||||||||||    
T  25889657 caagatgttgaaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaattaaacatt-aaga-tcaaaattaacttt 25889754  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | || |||||||| |||| |||||||| ||| |||||||||    
T  25889755 tccagaaaagtcagtttcctgactgcatcgtagaagctccc 25889795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 42 - 181
Target Start/End: Original strand, 12910642 - 12910779
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||| ||||||||||  || |||||||||||||||||||||||||||| |||  | ||||||||||    
T  12910642 caagatgttgcaagcattactagatgaattactattgaacattaatcagcaatcaacaatttaaaaatgaatcaaacattaa-gatc-ataattaacttt 12910739  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    | ||||||||||| |||| |||||||||| | ||||||||    
T  12910740 tccaaaaaagtcagtttcctgactgcaccatagaagctcc 12910779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 59 - 182
Target Start/End: Original strand, 26269113 - 26269234
Alignment:
Q  59 tactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcacttt 158  Q
    |||||||| |||||||| ||||||||||||||| || ||||||||||||||||| ||| |||| |||| |||||||||||||||||| |||||||| |||    
T  26269113 tactagataaattactactgatcattaatcagtaatcaacaatttaaaaatgaaccaatcatt-aaga-ttaaaattaactttttcataaaagtcagttt 26269210  T
Q  159 catgactgcaccgttgaagctccc 182  Q
    |||||||||||||| ||| |||||    
T  26269211 catgactgcaccgtagaaactccc 26269234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 35504625 - 35504773
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| ||||||  |||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||    
T  35504625 tcaacgataaaatagtacatgtaagtccaagatgttgcaagtattactagatgaattactattgattattaatcagtaatcaacaatttaaaaatgaatc 35504724  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgact 165  Q
    |||||||||  | | |||||| |||||||||||||||||| |||| |||||    
T  35504725 aaacattaa--aatcaaaattgactttttcaaaaaagtcaatttcttgact 35504773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 7208778 - 7208628
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  ||||   ||||||| ||||||  |||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||    
T  7208778 caacgataaaatagtacatgtaagttcaagatgttgcaagtattactagatgaattattattgatcattaatcagtaatcaacaatttaaaaatgaatca 7208679  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgca 168  Q
    ||||||||  | | |||||||||||||| |||||||||| |||| | ||||||    
T  7208678 aacattaa--aataaaaattaactttttaaaaaaagtcagtttcttaactgca 7208628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 72 - 182
Target Start/End: Complemental strand, 23116088 - 23115980
Alignment:
Q  72 actattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccg 171  Q
    |||||||||||||||||||| || ||||||||||||||||||||||||||||  | | ||||||||||||||||||||||||| |||| ||||| |||||    
T  23116088 actattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaactttttcaaaaaagtcattttcctgacttcaccg 23115991  T
Q  172 ttgaagctccc 182  Q
    | ||| |||||    
T  23115990 tagaaactccc 23115980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 35826401 - 35826268
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||| | || |||||||||||||||||||    
T  35826401 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatc 35826302  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaa 150  Q
    ||||||| |||| | |||||||||||||| ||||||    
T  35826301 aaacatt-aaga-tcaaaattaactttttaaaaaaa 35826268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 17 - 178
Target Start/End: Original strand, 36860684 - 36860845
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||| ||| |||| ||| ||||| |||||| |||||||| || |||||||||| ||||| ||| ||| || |||||||||||||||||||    
T  36860684 tcaacgataaaataatatttgtaagtccaagatgttgcaagcattactaaatgaattactattaatcatgaattagtaatcaacaatttaaaaatgaatc 36860783  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagc 178  Q
    || |||| |||| |||||||||||||||| |||||||||| |||  |||||||||||| |||||    
T  36860784 aagcatt-aaga-ttaaaattaacttttttaaaaaagtcaattttctgactgcaccgtagaagc 36860845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 170
Target Start/End: Original strand, 8467020 - 8467139
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| |||||||||||||||||||| ||| || |||| |||||||||||||||||||||||| |  ||||||||||||||| ||||    
T  8467020 ttgcaagcattactagatgaattactattgatcattaattagtaatcaacagtttaaaaatgaatcaaacattaaaaa--taaaattaactttttaaaaa 8467117  T
Q  149 aagtcactttcatgactgcacc 170  Q
    || ||| ||| |||| ||||||    
T  8467118 aaatcagtttaatgattgcacc 8467139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 18 - 179
Target Start/End: Original strand, 5830153 - 5830314
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg-aatc 114  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||| ||||    
T  5830153 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaaatc 5830252  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    |||||||||  | | ||||||||| ||||| |||| |||| |||  |||||||||||| ||||||    
T  5830253 aaacattaa--aatcaaaattaac-ttttccaaaatgtcaattttctgactgcaccgtagaagct 5830314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 43 - 170
Target Start/End: Complemental strand, 27318376 - 27318250
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaa-tttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||   || ||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  27318376 aagatgttgcaaacattactatatgaattactattgatcattaatcaaaaatcaacaattttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 27318279  T
Q  142 ttcaaaaaagtcactttcatgactgcacc 170  Q
    || |||||||||| |||  ||||||||||    
T  27318278 tttaaaaaagtcagttttctgactgcacc 27318250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 164
Target Start/End: Complemental strand, 30969239 - 30969091
Alignment:
Q  17 tcaacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||| |||||||||||||| ||   |||||||  |||||  |||||||||| | |||||||| ||||||||||||| ||  ||||||||||||||||||    
T  30969239 tcaacaataaaatagtatctataagttcaagatgctgcaagtattactagatgagttactattaatcattaatcagtaatccacaatttaaaaatgaatc 30969140  T
Q  115 aaacattaaagatttaaaattaac-tttttcaaaaaagtcactttcatgac 164  Q
    |||||||||  | ||||||||||| ||||| |||||||||| |||||||||    
T  30969139 aaacattaa--aattaaaattaacttttttaaaaaaagtcagtttcatgac 30969091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 13956276 - 13956116
Alignment:
Q  18 caacgataaaatagtatctgt-agtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||| |||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||  || |   |||    
T  13956276 caacgataaaatagtacctgttagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaattt--aactttttca 13956179  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtca-ctttcatgactgcaccgttgaagctc 180  Q
    ||||||||  | | ||||||||| ||||||||||| ||| ||||| |||||||||||| |||||||    
T  13956178 aacattaa--aatcaaaattaacattttcaaaaaaatcagctttc-tgactgcaccgtagaagctc 13956116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 54 - 182
Target Start/End: Complemental strand, 23954671 - 23954552
Alignment:
Q  54 aacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtc 153  Q
    ||||||||| ||| ||||||||||||||||||||||       ||||||||||||||||| ||||||||| |||  | ||||||||||||||||||||||    
T  23954671 aacattacttgatgaattactattgatcattaatca-------acaatttaaaaatgaattaaacattaa-gatc-ataattaactttttcaaaaaagtc 23954581  T
Q  154 actttcatgactgcaccgttgaagctccc 182  Q
    | |||| |||||||||| | |||||||||    
T  23954580 agtttcctgactgcaccatagaagctccc 23954552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1429076 - 1429001
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagt 91  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  1429076 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagt 1429001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 75 - 159
Target Start/End: Complemental strand, 14919394 - 14919312
Alignment:
Q  75 attgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    ||||||||||||||||  ||  | ||||||||||||||||||||||| |||| | |||||||| |||||||||||||||| ||||    
T  14919394 attgatcattaatcagaaatctaaaatttaaaaatgaatcaaacatt-aaga-tcaaaattaattttttcaaaaaagtcagtttc 14919312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 11898197 - 11898240
Alignment:
Q  139 tttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||| |||| |||||||||||| |||||||||    
T  11898197 tttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 11898240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 182
Target Start/End: Complemental strand, 1428973 - 1428923
Alignment:
Q  132 aattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||| ||||||||||| |||||||| |||||| | |||||||||    
T  1428973 aattaacttttccaaaaaagtcagtttcatgagtgcaccatagaagctccc 1428923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 88; Significance: 3e-42; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 1149562 - 1149398
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||||||||||||||||||||| || || ||||||||||||||||||||    
T  1149562 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcggtaatcaacaatttaaaaatgaatca 1149463  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | |||||||| |||||||||||||||| |||| |||||||||||| |||||||||    
T  1149462 aacattaa--aatcaaaattaattttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 1149398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 16446801 - 16446641
Alignment:
Q  22 gataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaaca 119  Q
    |||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||| ||||    
T  16446801 gataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatctaaca 16446702  T
Q  120 ttaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||  | | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  16446701 ttaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaagctccc 16446641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 5299876 - 5299712
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||| ||||||||||||| || |||||||||||||||||| |    
T  5299876 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattaatcattaatcagtaatcaacaatttaaaaatgaatta 5299777  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  5299776 aacatt-aaga-ttaaaattaactttttcaaaaaagtcagtttcatgactgcaccatagaagctccc 5299712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 42 - 187
Target Start/End: Original strand, 38644264 - 38644407
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| || || ||||||||||| ||||||||||| |||| ||||||||||||||    
T  38644264 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaaaaatttaaaaataaatcaaacatt-aaga-ttaaaattaacttt 38644361  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    ||||||||||||| |||||||||||||||||  |||||||| ||||    
T  38644362 ttcaaaaaagtcagtttcatgactgcaccgtaaaagctcccaaatt 38644407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 43 - 179
Target Start/End: Original strand, 466119 - 466253
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||||||||||| |    
T  466119 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttat 466216  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    |||||||| ||| ||||||||||||||||| ||||||    
T  466217 tcaaaaaaatcagtttcatgactgcaccgtagaagct 466253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 191
Target Start/End: Complemental strand, 7890887 - 7890714
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| || || |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  7890887 caacgataaaatagtacatgtaagtctaaaatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 7890788  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaattcaat 191  Q
    || ||| |||| | ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | ||||||    
T  7890787 aatatt-aaga-tcaaaattaactttttcaaaaaagtcagtttcatgaccgcaccgtagaagctcccaacttcaat 7890714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 11727284 - 11727449
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||| |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  11727284 caacgataaaatagtatatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 11727383  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaa-gtcactttcatgactgcaccgttgaagctccc 182  Q
    |  ||| |||| |||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||    
T  11727384 attatt-aaga-ttaaaattaacttttttaaaaaatgtcaatttcatgactgcaccgtagaagctccc 11727449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 44869783 - 44869907
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||| |  ||||||||||||||||||||||||||||  | ||||||||||||||    
T  44869783 caagatattgcaagcattactagatgaattactattgatcattaatcagtaaccaacaatttaaaaatgaatcaaacattaa--aattaaaattaacttt 44869880  T
Q  142 ttcaaaaaagtcactttcatgactgca 168  Q
    ||||||||||||| |||||| ||||||    
T  44869881 ttcaaaaaagtcagtttcataactgca 44869907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 37970444 - 37970285
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||||||| |||||||||||||||  || |||||||||||||||||||||||||    
T  37970444 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactgttgatcattaatcagaaatcaacaatttaaaaatgaatcaaacat 37970345  T
Q  121 taaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| | |||||||||||||||||||||||||||||| |||||||||| | |||||||||    
T  37970344 t-aaga-tcaaaattaactttttcaaaaaagtcactttcctgactgcaccatagaagctccc 37970285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 35859194 - 35859358
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  ||||   || |||| |||||| ||||||||||| ||||| |||||||||||||||||| || ||||||||||||||||||||    
T  35859194 caacgataaaatagtacttgtaagttcgagatgttgcaagcattactagatgaattaatattgatcattaatcagtaatcaacaatttaaaaatgaatca 35859293  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||  | | ||||||||||||||||||||||||| |||| |||||||||||| ||| |||||    
T  35859294 aacattaa--aatcaaaattaactttttcaaaaaagtcagtttcctgactgcaccgtagaaactccc 35859358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 12587841 - 12587978
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtcaa-gatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| ||||| ||||| ||| |||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  12587841 tcaacgataaaatagtacctgtaagtcaaagattttgcaagcattactagatgaattactattgatcattaatcagtaattaacaatttaaaaatgaatc 12587940  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtca 154  Q
    ||||||| |||| | |||||||| ||||||||||||||||    
T  12587941 aaacatt-aaga-tcaaaattaattttttcaaaaaagtca 12587978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 41 - 182
Target Start/End: Original strand, 34895247 - 34895386
Alignment:
Q  41 tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactt 140  Q
    ||||||| |||||| |||||||| || |||||||||||||||||||||||| || ||||||||||||||||||||||||||||  | | |||||||||||    
T  34895247 tcaagatgttgcaagcattactatatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaa--aatcaaaattaactt 34895344  T
Q  141 tttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||| |||||||||| |||| | |||||||||| |||||||||    
T  34895345 ttttaaaaaagtcaatttcctaactgcaccgtagaagctccc 34895386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 179
Target Start/End: Complemental strand, 34951988 - 34951826
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| ||||||   |||||| || |||||||||||||||||||||||| || |||||||||||||||||||    
T  34951988 tcaacgataaaatagtacatgtaagtctaagatgttgcaagtcttactacatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatc 34951889  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagct 179  Q
    ||||||| |||| |||||||||||||||||| |||||||| |||||||| |||||||| ||||||    
T  34951888 aaacatt-aaga-ttaaaattaactttttcagaaaagtcagtttcatgattgcaccgtagaagct 34951826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 43643499 - 43643361
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||||| ||  ||||||||||||||||||||||||| |||| | ||||||||||||    
T  43643499 caagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcgacaatttaaaaatgaatcaaacatt-aaga-tcaaaattaacttt 43643402  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| |||  |||||||||| | |||||||||    
T  43643401 ttcaaaaaagtcagttttctgactgcaccatagaagctccc 43643361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 8803747 - 8803592
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||  |||| ||| ||||| |||||| |||||| |||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  8803747 caacgataaaatagtacatgtaagtccaagatgttgcaagcattaccagatgaatatactattgatcattaatcagtaatgaacaatttaaaaatgaatc 8803648  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| ||||||||||||    
T  8803647 aaacattaa--aatcaaaattaactttttcaaaaaagtcaatttcctgactgcaccgt 8803592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 33198062 - 33198226
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| || || |||||| ||| ||||||| |||||||||||||||||||||| | || ||||||||||||||||||||    
T  33198062 caacgataaaatagtacatgtaagtctaaaatgttgcaagcatcactagatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatca 33198161  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | |||| |||| |||| |||||||||||||||||||||| |||||||| |||||||| |||||||||    
T  33198162 atcatt-aaga-ttaagattaactttttcaaaaaagtcaatttcatgattgcaccgtagaagctccc 33198226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 154
Target Start/End: Complemental strand, 35459636 - 35459505
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||||||||| ||| || || |||||||||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  35459636 ataaaatagtatctgtaagtccaaaatgttgcaaacattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacat 35459537  T
Q  121 taaagatttaaaattaactttttcaaaaaagtca 154  Q
    | |||| | |||||||||||||||||||||||||    
T  35459536 t-aaga-tcaaaattaactttttcaaaaaagtca 35459505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 170
Target Start/End: Original strand, 18259338 - 18259491
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||||| | ||||||| |||| ||| || |||||||||||||||||||    
T  18259338 tcaacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattattgttgatcagtaatgagtaatcaacaatttaaaaatgaatc 18259437  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    || ||||||  | ||||||||||| ||||||||||||||| |||||||||||||||    
T  18259438 aatcattaa--aattaaaattaaccttttcaaaaaagtcaatttcatgactgcacc 18259491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 4132616 - 4132451
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| ||||||||||||||||||||  || || |||||||||||||||||| |    
T  4132616 caacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatttgtaatcaacaatttaaaaatgaatta 4132517  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcccc 183  Q
     ||||| |||| | ||||||||||||| ||||||||||| |||  |||||||||| | ||||||||||    
T  4132516 cacatt-aaga-tcaaaattaacttttccaaaaaagtcagtttgctgactgcaccatagaagctcccc 4132451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 181
Target Start/End: Original strand, 41362716 - 41362845
Alignment:
Q  50 tgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaa 149  Q
    |||||| |||||||||| ||||||||||||||||||| |||| || |||||||||||||||||| ||||||| |||| | |||||||| |||||||||||    
T  41362716 tgcaaaaattactagatgaattactattgatcattaaccagtaatcaacaatttaaaaatgaattaaacatt-aaga-tcaaaattaattttttcaaaaa 41362813  T
Q  150 agtcactttcatgactgcaccgttgaagctcc 181  Q
    ||||| |||| |||||||||| | ||||||||    
T  41362814 agtcagtttcctgactgcaccatagaagctcc 41362845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 1953919 - 1953764
Alignment:
Q  17 tcaacgataaaatagtatctgtagt--caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||| |||||    |||||| |||||| ||||| ||||| |||||||||||||||||||||| | || |||||||| ||||||||||    
T  1953919 tcaacgataaaatagtacctgtaaatccaagattttgcaagcattattagatgaattactattgatcattaatcaataatcaacaattttaaaatgaatc 1953820  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    ||||||| |||| | |||||||| |||||||||||| ||| |||| ||||||||||||    
T  1953819 aaacatt-aaga-tcaaaattaattttttcaaaaaaatcagtttcctgactgcaccgt 1953764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 150
Target Start/End: Complemental strand, 23854356 - 23854229
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacat 120  Q
    ||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  23854356 ataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagaaatcaacaatttaaaaatgaatcaaacat 23854257  T
Q  121 taaagatttaaaattaactttttcaaaaaa 150  Q
    | |||| | |||||||||||||||||||||    
T  23854256 t-aaga-tcaaaattaactttttcaaaaaa 23854229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 30654514 - 30654349
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| |||||||| || ||| || |||||||||||||||||| ||||||||||||||| |||||    
T  30654514 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactaaatgaatatattattgatcattaatcagtaattaacaatttaaaa-tgaat 30654416  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||| ||||||   | ||||||||||||||||||||| ||| |||| |||||||||||| ||| |||||    
T  30654415 caaatattaaaa--tcaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaaactccc 30654349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 43 - 181
Target Start/End: Complemental strand, 31933789 - 31933653
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||||||||| |||||||||||| ||||| |||||||||||||||||| || ||| |||||||||||||||||| ||| |||| | |||||||| ||||    
T  31933789 aagatattgcagacattactagatgaattattattgatcattaatcagtaatcaacgatttaaaaatgaatcaaatatt-aaga-tcaaaattaattttt 31933692  T
Q  143 tcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||||||||| ||||   |||||||| | ||||||||    
T  31933691 tcaaaaaagtcagtttcccaactgcaccatagaagctcc 31933653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 39099050 - 39098895
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||| |||| ||| || || |||||| ||||||||||| |||||||||||||||||||| | | || || |||||||||||| |||    
T  39099050 tcaacgataaaatagtatatgtaagtccaaaatgttgcaagcattactagatgaattactattgatcattaattaataatcaataatttaaaaatgcatc 39098951  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||  | |||||||||| ||||| |||||| ||| |||||||| ||||||||    
T  39098950 aaacattaa--aattaaaattaatttttttaaaaaaatcagtttcatgattgcaccgt 39098895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 1205188 - 1205351
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    ||||||||||||||| ||||| ||| ||||| ||||||  |||||||||| |||||||||||||||||||||| | || | |||||||||||||||||||    
T  1205188 aacgataaaatagtacctgtaagtccaagatgttgcaagtattactagatgaattactattgatcattaatcactaatcagcaatttaaaaatgaatcaa 1205287  T
Q  117 acattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||   |||| | |||||||||||||| |||||||||| |||  ||||| |||||| |||||||||    
T  1205288 aca-acaaga-tcaaaattaacttttttaaaaaagtcaattttctgactacaccgtagaagctccc 1205351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 16223150 - 16223231
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaa 124  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  16223150 aagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaaacattaaa 16223231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 24823324 - 24823194
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||||||||||| |||||||||||| || |||||||||||||| |||||    
T  24823324 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgttcattaatcagtaatcaacaatttaaaaataaatca 24823225  T
Q  116 aacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| |||| |||||||||||||||| ||||    
T  24823224 aacatt-aaga-ttaaaattaacttttttaaaa 24823194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 42 - 123
Target Start/End: Complemental strand, 6098417 - 6098336
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaa 123  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||| ||| || ||||||||||||||||||||||||||||    
T  6098417 caagatgttgcaagcattactagatgaattactattgatcattaattagtaatcaacaatttaaaaatgaatcaaacattaa 6098336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 33906471 - 33906634
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||  || |  ||||||||||||||||    
T  33906471 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagcaatca--aatttaaaaatgaatc 33906568  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
     || | | |||| | ||||||||||||||||||||||||| |||  ||||||||| || |||||||||    
T  33906569 gaatagt-aaga-tcaaaattaactttttcaaaaaagtcagttttctgactgcactgtagaagctccc 33906634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 53 - 159
Target Start/End: Original strand, 43025971 - 43026076
Alignment:
Q  53 aaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaac-tttttcaaaaaag 151  Q
    |||||||| ||||| |||||||||||||||| ||||||| || ||||||||||||||||||||||||||||  | ||||||||||| ||||||||||||     
T  43025971 aaacattattagataaattactattgatcatgaatcagtgatcaacaatttaaaaatgaatcaaacattaa--aattaaaattaacttttttcaaaaaaa 43026068  T
Q  152 tcactttc 159  Q
    ||| ||||    
T  43026069 tcaatttc 43026076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 27082769 - 27082636
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||| | ||||||||||| | || ||||||||||||||||||     
T  27082769 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactacttatcattaatcaataatcaacaatttaaaaatgaatt 27082670  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaa 150  Q
    ||||||| |||| | |||||||||||||||||||||    
T  27082669 aaacatt-aaga-tcaaaattaactttttcaaaaaa 27082636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 36694870 - 36694732
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||| ||||||| |||||||||| ||||| ||| ||| || || ||||||||||| |||||||||||||  | |||||| |||||||    
T  36694870 caagatgttgcaagcatcactagatgaattactatttatcatgaataagtaatcaataatttaaaaataaatcaaacattaa--aattaaaagtaacttt 36694773  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||| ||| |||| | |||||| ||| |||||||||    
T  36694772 ttcaaaaaaatcagtttcttcactgcatcgtagaagctccc 36694732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 40862678 - 40862821
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaattt-aaaaatgaat 113  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| ||||||||||  |||| ||||||| ||  ||||||| ||||||||||    
T  40862678 tcaacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactatttgtcataaatcagtaatcgacaatttaaaaaatgaat 40862777  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    |||||||| |||| |||||| |||||||||||||||||||| ||||    
T  40862778 caaacatt-aaga-ttaaaagtaactttttcaaaaaagtcaatttc 40862821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 110
Target Start/End: Complemental strand, 1149850 - 1149756
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatg 110  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||    
T  1149850 caacgataaaatagtacttgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatg 1149756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 182
Target Start/End: Complemental strand, 10555129 - 10554970
Alignment:
Q  23 ataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattac--tattgatcattaatcagtcattaacaatttaaaaatgaatcaaac 118  Q
    ||||||||||| ||||| ||| |||||||||||| ||||||||||| ||||||  |||||||||||||   || || |||||||||||||||||||||||    
T  10555129 ataaaatagtacctgtaagtccaagatattgcaagcattactagatgaattacactattgatcattaa---gtaataaacaatttaaaaatgaatcaaac 10555033  T
Q  119 attaaagatttaaaattaa-ctttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||| |||| | ||||||||  |||||||||||||||| |||  |||| ||||| | |||||||||    
T  10555032 att-aaga-tcaaaattaatttttttcaaaaaagtcaattttctgaccgcaccatagaagctccc 10554970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 9864408 - 9864509
Alignment:
Q  18 caacgataaaatagtatctgtag--tcaagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| |||||   ||||||| |||||| ||||||||||| ||| |||| | ||||| |||| || || ||||||||||||||||||||    
T  9864408 caacgataaaatagtacctgtaagttcaagatgttgcaagcattactagatgaataactagtaatcatgaatcggtaatcaacaatttaaaaatgaatca 9864507  T
Q  116 aa 117  Q
    ||    
T  9864508 aa 9864509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 17 - 159
Target Start/End: Original strand, 12876369 - 12876511
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| || ||  ||||||||||| |||||||||| ||||| ||| ||| || |||| ||| ||||| ||||    
T  12876369 tcaacgataaaatagtacatgtaagtccaagatgttacaggcattactagatgaattactatttatcatgaataagtaatcaacagtttgaaaataaatc 12876468  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    |||||||||  | |||||| ||||||||| |||||||||| ||||    
T  12876469 aaacattaa--aattaaaagtaacttttttaaaaaagtcagtttc 12876511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 108 - 182
Target Start/End: Original strand, 13307931 - 13308003
Alignment:
Q  108 atgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||| |||||||| |||||| | |||||||||    
T  13307931 atgaatcaaacattaa-gatt-aaaattaactttttcaaaatagtcaatttcatgattgcaccatagaagctccc 13308003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 30650946 - 30650899
Alignment:
Q  135 taactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||    
T  30650946 taactttttcaaaaaagtcaatttcttgactgcaccgtagaagctccc 30650899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 181
Target Start/End: Original strand, 9864541 - 9864594
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    ||||||||||||||||||||||||||| |||| | |||||||| | ||||||||    
T  9864541 ttaaaattaactttttcaaaaaagtcagtttcctaactgcaccttagaagctcc 9864594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 41910878 - 41910824
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||| ||||||||||  || ||||||||||| | |||||||||    
T  41910878 ttaaaattaacttttttaaaaaagtcaaattaatgactgcaccatagaagctccc 41910824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 84; Significance: 7e-40; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 3879863 - 3879698
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||| ||||||| || |||||||||||||||||||    
T  3879863 tcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattactattgatcatgaatcagtaatcaacaatttaaaaatgaatc 3879764  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||| |||| ||||||||||||||||||||||| ||| |||| |||||||||||| |||| ||||    
T  3879763 aaacatt-aaga-ttaaaattaactttttcaaaaaaatcagtttcctgactgcaccgtagaaggtccc 3879698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 19 - 183
Target Start/End: Complemental strand, 6091104 - 6090940
Alignment:
Q  19 aacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaa 116  Q
    ||||||||||||||| ||||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||    
T  6091104 aacgataaaatagtacctgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatcaa 6091005  T
Q  117 acattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcccc 183  Q
    ||||| |||| | |||||||||||||| |||||||| | |||  |||||||||||| ||||||||||    
T  6091004 acatt-aaga-tcaaaattaacttttttaaaaaagtaagttttctgactgcaccgtagaagctcccc 6090940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 33892909 - 33892776
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| ||||||||||||||| || |||||||||||||||||||||| | || |||||||||||||||||||||||||||| |  ||||||||||||||    
T  33892909 caagatgttgcaaacattactaaatgaattactattgatcattaatcaataatcaacaatttaaaaatgaatcaaacattaagg--ttaaaattaacttt 33892812  T
Q  142 ttcaaaaaagtcactttcatgactgcaccgttgaag 177  Q
    ||||||||||||| |||||| | |||||||| ||||    
T  33892811 ttcaaaaaagtcagtttcataattgcaccgtagaag 33892776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 42 - 182
Target Start/End: Complemental strand, 4318719 - 4318575
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaa----agatttaaaattaa 137  Q
    |||||| |||||| ||||||||||| |||||||||||||||||||||| | || |||||||||||||| |||||||||||||    | | ||||||||||    
T  4318719 caagatgttgcaagcattactagatgaattactattgatcattaatcattaatcaacaatttaaaaataaatcaaacattaaaattaaaattaaaattaa 4318620  T
Q  138 ctttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||| ||| |||||| |||||||||| |||||||||    
T  4318619 ctttttcaaaaaaatcagtttcataactgcaccgtagaagctccc 4318575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 20768342 - 20768507
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||| | |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||     
T  20768342 tcaacgataaaatagtacatgtaagtccaaggtgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatt 20768441  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
     |||||| |||| | ||||||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  20768442 gaacatt-aaga-tcaaaattaactttttcaaaaaaatcaatttcctgactgcaccgtagaagctccc 20768507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 7054696 - 7054541
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||| ||||| ||| ||||| ||||||||||||||| || ||| ||||||||||||||||||| | || ||||||||||| |||||||    
T  7054696 caacgataaaatagtaactgtaagtccaagatgttgcaaacattactaaatgaatatactattgatcattaatcattaatcaacaatttaaagatgaatc 7054597  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||  | | ||||||||||||||||||||||||| |||| ||||||||||||    
T  7054596 aaacattaa--aatcaaaattaactttttcaaaaaagtcagtttcttgactgcaccgt 7054541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 187
Target Start/End: Original strand, 5627651 - 5627822
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaat 113  Q
    ||||||||||||||||| ||||| ||| ||||| |||||| ||||||||| | ||| ||||||||||||||||||||| || ||||||||||||||||||    
T  5627651 tcaacgataaaatagtacctgtaagtccaagatgttgcaagcattactaggtgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaat 5627750  T
Q  114 caaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccccaatt 187  Q
    |||| |||||  | | |||||||| ||||| |||||| ||| |||| |||||||||||| ||||||||| ||||    
T  5627751 caaatattaa--aatcaaaattaatttttttaaaaaaatcagtttcctgactgcaccgtagaagctccctaatt 5627822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 49 - 172
Target Start/End: Original strand, 8513522 - 8513636
Alignment:
Q  49 ttgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaa 148  Q
    |||||| ||||||||||| ||||||||||||||||||||||       ||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  8513522 ttgcaagcattactagatgaattactattgatcattaatca-------acaatttaaaaatgaatcaaacattaaaa--ttaaaattaactttttcaaaa 8513612  T
Q  149 aagtcactttcatgactgcaccgt 172  Q
    |||||| |||||||||||||||||    
T  8513613 aagtcagtttcatgactgcaccgt 8513636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 1946095 - 1946260
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||||  |||| ||| ||||| || ||| ||||| ||||| ||| ||||||||||||||||||||| || |||||||||||||||||||    
T  1946095 caacgataaaatagtacatgtaagtccaagatgttacaagcattattagatgaatatactattgatcattaatcagtaatcaacaatttaaaaatgaatc 1946194  T
Q  115 aaacattaaagatttaaaattaac-tttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||||||  | | ||||||||| |||||||||||||||| |||| |||||||||||| ||||||||    
T  1946195 aaacattaa--aatcaaaattaacttttttcaaaaaagtcagtttcctgactgcaccgtagaagctcc 1946260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 7234958 - 7234791
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaat---cagtcattaacaatttaaaaatgaa 112  Q
    ||||||||||||||||  |||| ||| ||||| |||||||||||||||||| ||||||||||||||||||||   ||   || |||||||||||||| ||    
T  7234958 caacgataaaatagtacatgtaagtccaagatgttgcaaacattactagatgaattactattgatcattaatcaacaacaatcaacaatttaaaaataaa 7234859  T
Q  113 tcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    || |||||| |||| | ||||||||||||||||||||| ||| |||| ||||| ||||||  ||||||||    
T  7234858 tcgaacatt-aaga-tcaaaattaactttttcaaaaaaatcattttcctgactacaccgtaaaagctccc 7234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 159
Target Start/End: Original strand, 33619091 - 33619235
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcatta---atcagtcattaacaatttaaaaatgaa 112  Q
    ||||||||||||||||  |||| ||| || || |||||| ||||||||||| ||||||||||||||||||   |||||  || |||||||||||||||||    
T  33619091 caacgataaaatagtacatgtaagtccaatatgttgcaagcattactagatgaattactattgatcattaatgatcagcaatcaacaatttaaaaatgaa 33619190  T
Q  113 tcaaacattaaagatttaaaattaactttttcaaaaaagtcactttc 159  Q
    || |||||| |||| |||||||||||||||| |||||||||| ||||    
T  33619191 tcgaacatt-aaga-ttaaaattaactttttaaaaaaagtcaatttc 33619235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 21017014 - 21016916
Alignment:
Q  43 aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttt 142  Q
    ||||| |||||| ||||||||||| |||||||||| ||||| ||||||| || ||||||||| |||||||||||| ||| |||| |||||||||||||||    
T  21017014 aagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttataaatgaatcaaatatt-aaga-ttaaaattaactttt 21016917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 29182425 - 29182573
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| ||||||  |||||||||| |||||||   ||||||||||||   || ||||||||||||||||||||    
T  29182425 caacgataaaatagtacttgtaagtctaagatgttgcaagtattactagatgaattact---gatcattaatcaacaatcaacaatttaaaaatgaatca 29182521  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcac 169  Q
    | |||||| || | ||||||||||||||||||||||| | ||||||| ||||||    
T  29182522 atcattaa-gact-aaaattaactttttcaaaaaagttagtttcatgcctgcac 29182573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 6089164 - 6089286
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    |||||||||||||||| | ||| ||| || || |||||| |||||||| || ||||||||||||||||||||||       |||||||||||||||||||    
T  6089164 caacgataaaatagtaccagtaagtccaaaatgttgcaagcattactatatgaattactattgatcattaatca-------acaatttaaaaatgaatca 6089256  T
Q  116 aacattaaagatttaaaattaactttttcaaa 147  Q
    ||||||||  | |||||||||| |||||||||    
T  6089257 aacattaa--aattaaaattaattttttcaaa 6089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 182
Target Start/End: Complemental strand, 6613704 - 6613657
Alignment:
Q  135 taactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||||||||||||| |||| ||||||||||||  ||||||||    
T  6613704 taactttttcaaaaaagtcagtttcctgactgcaccgtacaagctccc 6613657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 15491887 - 15491941
Alignment:
Q  128 ttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||| ||||||||||| |||||||| | ||||||||||||| ||| |||||||||    
T  15491887 ttaatattaacttttttaaaaaagttagtttcatgactgcaacgtagaagctccc 15491941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 182
Target Start/End: Complemental strand, 21016778 - 21016726
Alignment:
Q  130 aaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||| ||||||||||||||||| || |||  |||||||||||| |||||||||    
T  21016778 aaaaataactttttcaaaaaagacaattttctgactgcaccgtagaagctccc 21016726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 181
Target Start/End: Original strand, 12170 - 12332
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || |||||||||||||| |||||    
T  12170 caacgataaaatagtacatgtaagtctaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaat-aatca 12268  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctcc 181  Q
    |||||| |||| |||||||||||||||| |||||||| | ||||||||||||||||| ||||||||    
T  12269 aacatt-aaga-ttaaaattaacttttttaaaaaagtaagtttcatgactgcaccgtagaagctcc 12332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 18 - 182
Target Start/End: Original strand, 8148 - 8312
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  8148 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 8247  T
Q  116 aacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    | | ||||  | | |||||||||||| |||||||||||| |||| |||||||||||| |||||||||    
T  8248 atcgttaa--aatcaaaattaactttatcaaaaaagtcaatttcctgactgcaccgtagaagctccc 8312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 182
Target Start/End: Complemental strand, 145940 - 145775
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaat-tactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    ||||||||||||||| |||||| ||| ||||| |||||| |||||||| || ||| ||| ||||||||||||||||| || || |||||||||||||||     
T  145940 caacgataaaatagtgtctgtaagtccaagatgttgcaagcattactaaatgaatatacaattgatcattaatcagtaataaaaaatttaaaaatgaatt 145841  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||   | ||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  145840 aaacattaaaa--tcaaaattaactttttcaaaaaagtcaatttcctgactgcaccgtagaagctccc 145775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 66; Significance: 4e-29; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 18 - 148
Target Start/End: Complemental strand, 408353 - 408223
Alignment:
Q  18 caacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatca 115  Q
    ||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  408353 caacgataaaatagtacatgtaagtccaagatgttgcaagcattactagatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatca 408254  T
Q  116 aacattaaagatttaaaattaactttttcaaaa 148  Q
    ||||||||  | | |||||||| ||||||||||    
T  408253 aacattaa--aataaaaattaattttttcaaaa 408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 42 - 146
Target Start/End: Original strand, 415 - 517
Alignment:
Q  42 caagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaacttt 141  Q
    |||||| |||||| ||||||||||| |||||||||| ||||| ||||||| || |||||||||||||||||||||||||| |||| ||||||||||||||    
T  415 caagatgttgcaagcattactagatgaattactattaatcatgaatcagtaatcaacaatttaaaaatgaatcaaacatt-aaga-ttaaaattaacttt 512  T
Q  142 ttcaa 146  Q
    |||||    
T  513 ttcaa 517  T

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Target: scaffold0002; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 172
Target Start/End: Complemental strand, 94025 - 93871
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||||| |||||| ||||||||||| |||| ||||||||||||||||| | || |||||||| ||||||||||    
T  94025 tcaacgataaaatagtacttgtaagtccaagatgttgcaagcattactagatgaattgctattgatcattaatcactaatcaacaattt-aaaatgaatc 93927  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgt 172  Q
    |||||||||  | | |||||||||||||| ||||| |||  |||| | ||||||||||    
T  93926 aaacattaa--aatcaaaattaacttttttaaaaaggtccgtttccttactgcaccgt 93871  T

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Target: scaffold0002; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 690 - 742
Alignment:
Q  130 aaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    ||||||||||||||||||||| ||| |||| |||||||||||| |||||||||    
T  690 aaaattaactttttcaaaaaaatcaatttcttgactgcaccgtagaagctccc 742  T

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Target: scaffold0061 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 182
Target Start/End: Original strand, 44216 - 44381
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||| | |||||| |||||||  || |||||||||||||||||||||||| || ||||||||||||||||||     
T  44216 tcaacgataaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatt 44315  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||| ||||||||||||||||||| |||  |||||||| ||| |||||||||    
T  44316 aaacattaa--aatcaaaatcaactttttcaaaaaagtcagtttgttgactgcatcgtagaagctccc 44381  T

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Target: scaffold0017 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 182
Target Start/End: Complemental strand, 154571 - 154406
Alignment:
Q  17 tcaacgataaaatagtatctgta-gtc-aagatattgcaaacattactagatcaattactattgatcattaatcagtcattaacaatttaaaaatgaatc 114  Q
    |||||||||||||||||  |||| ||| ||| | |||||| |||||||  || |||||||||||||||||||||||| || ||||||||||||||||||     
T  154571 tcaacgataaaatagtacatgtaagtccaagttgttgcaagcattactgaatgaattactattgatcattaatcagtaatcaacaatttaaaaatgaatt 154472  T
Q  115 aaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcaccgttgaagctccc 182  Q
    |||||||||  | | ||||| ||||||||||||||||||| |||  |||||||| ||| |||||||||    
T  154471 aaacattaa--aatcaaaatcaactttttcaaaaaagtcagtttgttgactgcatcgtagaagctccc 154406  T

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Target: scaffold0008 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 267606 - 267689
Alignment:
Q  85 aatcagtcattaacaatttaaaaatgaatcaaacattaaagatttaaaattaactttttcaaaaaagtcactttcatgactgcacc 170  Q
    ||||||| || |||||||||||||||||||||| ||||| |||  |||||||| |||||||||||||||| |||| ||||||||||    
T  267606 aatcagtaatcaacaatttaaaaatgaatcaaatattaa-gatc-aaaattaattttttcaaaaaagtcagtttcttgactgcacc 267689  T

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