View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3554_low_37 (Length: 263)
Name: NF3554_low_37
Description: NF3554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3554_low_37 |
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Alignment Details
Target: chr2 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 14 - 256
Target Start/End: Complemental strand, 37066810 - 37066568
Alignment:
| Q |
14 |
tttttatcctaccaacaggacaattcacaaaattaatcttacccaaatcatcaaaaaagaaactttctgacccttcatcacaattccaaaagccctgttc |
113 |
Q |
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| T |
37066810 |
tttttatcctaccaacaggacaattcacaaaattaatcttacccaaatcatcaaaaaagaaactttctgacccttcatcacaattccaaaagccctgttc |
37066711 |
T |
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| Q |
114 |
aagaatactagttggtgaacatgaatcaaattcttcaattttctcaacaccacaatcaagaaatggatgcttcaacaattgactacaactccacctctcc |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
37066710 |
aagaatactagttggtgaacatgaatcaaattcttcaattttctcaacaccacaatcaagaaattgatgcttcaacaattgactacaactccacctctcc |
37066611 |
T |
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| Q |
214 |
ttagaatccctccttaagcacttctccaagaaatcctttgctt |
256 |
Q |
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| T |
37066610 |
ttagaatccctccttaagcacttctccaagaaatcctttgctt |
37066568 |
T |
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