View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3554_low_44 (Length: 251)

Name: NF3554_low_44
Description: NF3554
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3554_low_44
NF3554_low_44
[»] chr1 (21 HSPs)
chr1 (17-244)||(5047373-5047600)
chr1 (23-100)||(39426210-39426287)
chr1 (126-183)||(9651954-9652011)
chr1 (23-97)||(24977243-24977317)
chr1 (44-182)||(32887799-32887938)
chr1 (47-148)||(7844939-7845041)
chr1 (27-180)||(12151686-12151840)
chr1 (125-182)||(32618717-32618774)
chr1 (57-101)||(23916085-23916129)
chr1 (21-180)||(50484305-50484465)
chr1 (46-100)||(26372252-26372306)
chr1 (112-154)||(42720845-42720887)
chr1 (126-180)||(46045616-46045670)
chr1 (117-183)||(49384751-49384817)
chr1 (47-180)||(12380932-12381066)
chr1 (47-180)||(12384999-12385133)
chr1 (21-154)||(50294059-50294193)
chr1 (24-100)||(26860049-26860125)
chr1 (119-183)||(33441360-33441424)
chr1 (138-182)||(40988775-40988819)
chr1 (120-180)||(45977941-45978001)
[»] chr5 (26 HSPs)
chr5 (47-182)||(3057333-3057469)
chr5 (21-180)||(4895731-4895891)
chr5 (20-182)||(29340914-29341075)
chr5 (47-180)||(32129639-32129773)
chr5 (21-180)||(35660605-35660765)
chr5 (21-97)||(11775796-11775872)
chr5 (116-177)||(128139-128200)
chr5 (20-97)||(34827195-34827272)
chr5 (120-181)||(41660034-41660095)
chr5 (24-100)||(2984389-2984465)
chr5 (20-100)||(10362009-10362089)
chr5 (27-180)||(14349723-14349876)
chr5 (21-97)||(18625417-18625493)
chr5 (21-97)||(37266734-37266810)
chr5 (119-182)||(10173865-10173928)
chr5 (120-179)||(39902335-39902394)
chr5 (21-100)||(43309108-43309187)
chr5 (126-180)||(11775711-11775765)
chr5 (21-180)||(13032038-13032197)
chr5 (31-92)||(14688582-14688643)
chr5 (117-182)||(25256122-25256187)
chr5 (117-182)||(25319911-25319976)
chr5 (20-93)||(27428876-27428949)
chr5 (118-183)||(31546402-31546467)
chr5 (119-182)||(14733482-14733546)
chr5 (21-97)||(40753158-40753234)
[»] chr4 (30 HSPs)
chr4 (21-180)||(19901914-19902074)
chr4 (27-180)||(5763164-5763318)
chr4 (20-103)||(1871274-1871357)
chr4 (21-180)||(56558198-56558358)
chr4 (120-182)||(25442271-25442333)
chr4 (126-183)||(23119486-23119543)
chr4 (21-174)||(34778346-34778500)
chr4 (21-174)||(56269072-56269217)
chr4 (120-183)||(4404216-4404279)
chr4 (21-180)||(23610561-23610721)
chr4 (58-100)||(31862253-31862295)
chr4 (120-174)||(37002337-37002391)
chr4 (47-180)||(47922097-47922231)
chr4 (21-97)||(5416462-5416537)
chr4 (21-97)||(30567904-30567980)
chr4 (120-183)||(1015941-1016004)
chr4 (120-174)||(5361378-5361432)
chr4 (120-174)||(5524382-5524436)
chr4 (128-182)||(5815405-5815459)
chr4 (47-97)||(12312498-12312548)
chr4 (21-180)||(33247126-33247284)
chr4 (129-183)||(52552689-52552743)
chr4 (120-177)||(24073539-24073596)
chr4 (23-100)||(36532626-36532702)
chr4 (19-100)||(48914512-48914593)
chr4 (120-177)||(56563898-56563955)
chr4 (126-170)||(618839-618883)
chr4 (120-180)||(12153090-12153150)
chr4 (21-97)||(33262548-33262624)
chr4 (20-100)||(56453815-56453895)
[»] chr8 (18 HSPs)
chr8 (22-100)||(42761713-42761791)
chr8 (20-96)||(18689495-18689571)
chr8 (21-180)||(30426665-30426825)
chr8 (21-177)||(28069641-28069798)
chr8 (125-184)||(22594061-22594120)
chr8 (120-183)||(24241501-24241564)
chr8 (21-100)||(26749544-26749623)
chr8 (47-97)||(24102019-24102069)
chr8 (125-182)||(42502934-42502989)
chr8 (48-97)||(36991359-36991408)
chr8 (120-180)||(5033025-5033085)
chr8 (21-97)||(41511265-41511341)
chr8 (116-183)||(44888551-44888618)
chr8 (47-97)||(10672534-10672584)
chr8 (120-174)||(34612498-34612552)
chr8 (47-103)||(21486312-21486368)
chr8 (20-96)||(24557176-24557252)
chr8 (137-181)||(28820791-28820835)
[»] chr3 (21 HSPs)
chr3 (116-182)||(29586254-29586320)
chr3 (125-182)||(550917-550974)
chr3 (21-97)||(2229986-2230062)
chr3 (20-180)||(10474433-10474594)
chr3 (120-179)||(3009169-3009228)
chr3 (116-183)||(28229479-28229546)
chr3 (20-179)||(33632743-33632902)
chr3 (120-174)||(31523754-31523808)
chr3 (21-97)||(43719943-43720019)
chr3 (47-154)||(34373607-34373715)
chr3 (120-174)||(42613015-42613069)
chr3 (120-174)||(49679356-49679410)
chr3 (116-182)||(50463404-50463470)
chr3 (21-154)||(27033596-27033730)
chr3 (126-171)||(27959045-27959090)
chr3 (23-96)||(54911658-54911731)
chr3 (117-149)||(2310261-2310293)
chr3 (126-170)||(31996801-31996845)
chr3 (21-97)||(34373834-34373910)
chr3 (120-180)||(40851692-40851752)
chr3 (20-96)||(51982580-51982656)
[»] chr6 (18 HSPs)
chr6 (27-180)||(4804367-4804521)
chr6 (23-100)||(2800609-2800686)
chr6 (47-180)||(1249168-1249302)
chr6 (59-182)||(2720294-2720414)
chr6 (23-96)||(7215850-7215923)
chr6 (21-97)||(12412640-12412716)
chr6 (30-177)||(27826460-27826608)
chr6 (20-178)||(17828563-17828722)
chr6 (38-180)||(29698082-29698225)
chr6 (116-182)||(30460995-30461061)
chr6 (74-180)||(32737793-32737900)
chr6 (21-97)||(21159365-21159441)
chr6 (21-100)||(24484879-24484958)
chr6 (120-170)||(2142379-2142429)
chr6 (21-154)||(7162029-7162163)
chr6 (74-103)||(13324918-13324947)
chr6 (21-97)||(13089745-13089821)
chr6 (138-182)||(29229025-29229069)
[»] chr2 (25 HSPs)
chr2 (125-182)||(2061294-2061351)
chr2 (20-182)||(19908697-19908859)
chr2 (23-100)||(4446894-4446971)
chr2 (23-100)||(30709110-30709187)
chr2 (20-96)||(15709772-15709848)
chr2 (21-97)||(35316828-35316904)
chr2 (21-174)||(8988791-8988934)
chr2 (21-177)||(13238603-13238760)
chr2 (116-183)||(30824094-30824161)
chr2 (111-174)||(38445574-38445637)
chr2 (120-174)||(29188588-29188642)
chr2 (118-170)||(2805304-2805356)
chr2 (47-177)||(28564813-28564945)
chr2 (120-171)||(42075459-42075510)
chr2 (120-170)||(374932-374982)
chr2 (120-174)||(23459932-23459986)
chr2 (120-182)||(36758947-36759009)
chr2 (116-154)||(41073031-41073069)
chr2 (47-100)||(21454516-21454569)
chr2 (120-183)||(1498812-1498876)
chr2 (47-103)||(30857700-30857756)
chr2 (20-96)||(35315283-35315359)
chr2 (20-96)||(36929720-36929796)
chr2 (118-170)||(39329928-39329980)
chr2 (120-180)||(41983435-41983495)
[»] scaffold0126 (1 HSPs)
scaffold0126 (47-178)||(22464-22596)
[»] chr7 (26 HSPs)
chr7 (21-171)||(9559050-9559201)
chr7 (116-182)||(41271789-41271855)
chr7 (116-182)||(8607958-8608024)
chr7 (21-97)||(4888470-4888546)
chr7 (115-183)||(8149536-8149604)
chr7 (50-182)||(29630965-29631098)
chr7 (126-174)||(32916104-32916152)
chr7 (21-180)||(21151071-21151231)
chr7 (21-100)||(47799896-47799975)
chr7 (21-103)||(989126-989208)
chr7 (27-97)||(25084730-25084800)
chr7 (20-182)||(30153177-30153339)
chr7 (21-154)||(7362513-7362647)
chr7 (23-100)||(40023254-40023331)
chr7 (21-174)||(19889030-19889174)
chr7 (116-183)||(32915875-32915942)
chr7 (21-97)||(45260423-45260499)
chr7 (128-182)||(5464007-5464061)
chr7 (62-100)||(11828946-11828984)
chr7 (116-182)||(23311425-23311491)
chr7 (116-182)||(48839857-48839923)
chr7 (48-97)||(16366521-16366570)
chr7 (128-177)||(18064494-18064543)
chr7 (126-182)||(48831287-48831341)
chr7 (21-100)||(33450506-33450586)
chr7 (24-96)||(39855812-39855884)
[»] scaffold0062 (1 HSPs)
scaffold0062 (20-96)||(58684-58760)
[»] scaffold0008 (1 HSPs)
scaffold0008 (21-182)||(9197-9356)
[»] scaffold0250 (1 HSPs)
scaffold0250 (21-97)||(7150-7226)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-180)||(207982-208142)
[»] scaffold0468 (1 HSPs)
scaffold0468 (85-175)||(5534-5625)
[»] scaffold0171 (1 HSPs)
scaffold0171 (120-174)||(17392-17446)
[»] scaffold0035 (1 HSPs)
scaffold0035 (21-97)||(16393-16469)


Alignment Details
Target: chr1 (Bit Score: 191; Significance: 1e-104; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 5047373 - 5047600
Alignment:
Q  17 aaaatgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaact 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||        ||  |    
T  5047373 aaaatgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggtcccaccatcattaattattttatattttttcaaactt 5047472  T
Q  117 ttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactcacttgtattatacaattccatgtcatgtttatgt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5047473 ttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactcacttgtattatacaattccatgtcatgtttatgt 5047572  T
Q  217 taccaatttatttatataaggtcctttg 244  Q
    ||||||||||||||||||||||||||||    
T  5047573 taccaatttatttatataaggtcctttg 5047600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 39426287 - 39426210
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||| ||  ||||||||||||| ||| |||||||||||  ||||| |||| |||||||||||||||    
T  39426287 caatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaattatttt 39426210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 9652011 - 9651954
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    ||||| |||| |||||||||||||||||| | ||| ||||||||||||||||||||||    
T  9652011 tttatttctccaaatggaagaaatggagagactaacaaatggagaggatcttaactca 9651954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 97
Target Start/End: Complemental strand, 24977317 - 24977243
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||| ||||||||| ||  || |||||||||  ||||||||||||||| ||||||||||| ||||||| ||||    
T  24977317 caatttagagagagatagacacaaaaaatagatggtggatcctaccactaagtgggttccacaatcattagttat 24977243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 32887799 - 32887938
Alignment:
Q  44 cataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaac-tttttgtgcctttatctctctaaatgg 142  Q
    ||||||||| ||| |||||||||||| ||  ||||| ||||||||||||||||||||  |       ||||| |||||| | || |||||||| |||||     
T  32887799 cataaaataaatagtggatcctaccattaaatgggtcccaccatcattaattattttcaatttttttcaaacttttttgagtctatatctctccaaatga 32887898  T
Q  143 aagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||||||   ||  ||||| |||||||||||||||    
T  32887899 aagaaatggagaggatacaaaatgaagaggatcttaactc 32887938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 7845041 - 7844939
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactt-tttgtgcctttatctctctaaatggaag 145  Q
    |||||||||| ||||||||||||||| ||| || ||||||| |||||||| ||||||       ||||||| |||||  ||||||||||  |||||||||    
T  7845041 aaaatagatattggatcctaccactaagtgtgtcccaccattattaattagtttatacttttttcaaacttctttgtatctttatctcttcaaatggaag 7844942  T
Q  146 aaa 148  Q
    |||    
T  7844941 aaa 7844939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 12151840 - 12151686
Alignment:
Q  27 ttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttttgtgcc 125  Q
    |||||||||||  ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | ||| |||| |    
T  12151840 ttggagagagaaagacacaaaaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtc 12151741  T
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||||||||| |||| ||| ||||||||| |   |||||||| ||||||||||||    
T  12151740 tttatctctccaaattgaataaatggagaaacacataaatggggaggatcttaac 12151686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 32618774 - 32618717
Alignment:
Q  125 ctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||||| ||||||| ||||| |||| | |||||||||||||| ||||||||||    
T  32618774 ctttatctctcaaaatggatgaaatagagagaataataaatggagagaatcttaactc 32618717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 101
Target Start/End: Complemental strand, 23916129 - 23916085
Alignment:
Q  57 atggatcctaccactatgtgggttccaccatcattaattatttta 101  Q
    |||| ||||||||||| |||||| |||||||||||||||||||||    
T  23916129 atggctcctaccactacgtgggtcccaccatcattaattatttta 23916085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 50484465 - 50484305
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| | | ||||||| |||||| ||||| ||||||||||| || ||       |||  ||||     
T  50484465 tgcaagttggagagagatagacacaaaaaatagatggtgggtacaaccactaagtgggtcccaccgtcattaattatattttacttttttcaagatttta 50484366  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| ||||  |||||||||||| |   |||||||||||||||||||||    
T  50484365 tgtgtctttatctctccaaattaaagaaatggagaaacacataaatggagaggatcttaac 50484305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 100
Target Start/End: Complemental strand, 26372306 - 26372252
Alignment:
Q  46 taaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||||||| ||| |||||||||| || |||||| |||||| |||||||||||||    
T  26372306 taaaatagacaatagatcctaccattaagtgggtcccaccaccattaattatttt 26372252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 42720845 - 42720887
Alignment:
Q  112 aaactttttgtgcctttatctctctaaatggaagaaatggaga 154  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||    
T  42720845 aaactttatgtgtctttatctctctaaatgaaagaaatggaga 42720887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 46045670 - 46045616
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    ||||||| |||||||| || ||||||||| ||| |||||||||||| ||||||||    
T  46045670 tttatctttctaaatgaaacaaatggagaaagttataaatggagagaatcttaac 46045616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Original strand, 49384751 - 49384817
Alignment:
Q  117 ttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    ||||||| | |||||||| |||||||| |||||||||| | | |||||| ||||||||||| |||||    
T  49384751 ttttgtgtccttatctctttaaatggaggaaatggagagaattataaatagagaggatcttgactca 49384817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 12380932 - 12381066
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcctttatctctctaaatggaag 145  Q
    |||||||||  ||| | ||||||||| ||| || ||||||||||||||||| || ||       |||  |||| |||| ||||||||||| |||| ||||    
T  12380932 aaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaag 12381031  T
Q  146 aaatggagatagtaataaatggagaggatcttaac 180  Q
    ||||||||| |   |||||||||||||||| ||||    
T  12381032 aaatggagaaacacataaatggagaggatcctaac 12381066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 12384999 - 12385133
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcctttatctctctaaatggaag 145  Q
    |||||||||  ||| | ||||||||| ||| || ||||||||||||||||| || ||       |||  |||| |||| ||||||||||| |||| ||||    
T  12384999 aaaatagatggtgggttctaccactaagtgagtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctctccaaattgaag 12385098  T
Q  146 aaatggagatagtaataaatggagaggatcttaac 180  Q
    ||||||||| |   |||||||||||||||| ||||    
T  12385099 aaatggagaaacacataaatggagaggatcctaac 12385133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 50294059 - 50294193
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| |||| | | ||||||||||||||| || ||       ||| | |||     
T  50294059 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtggatcctaccatcattaattatattttatttttttcaagatttta 50294158  T
Q  120 tgtgcctttatctctctaaatggaagaaatggaga 154  Q
    |||| ||||||||||| ||||||||||||| ||||    
T  50294159 tgtgtctttatctctccaaatggaagaaattgaga 50294193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 26860049 - 26860125
Alignment:
Q  24 aatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||| |||||||| ||  ||||||||||||| | | ||||| ||||| |||| | |||| |||||||||||||||    
T  26860049 aatttgaagagagatagacacataaaatagatagtaggtcctatcactaagtggatcccacaatcattaattatttt 26860125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 33441424 - 33441360
Alignment:
Q  119 ttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    ||||| || |||| ||| |||| |||||||||||||| ||| |||||  ||||||||||||||||    
T  33441424 ttgtgtctctatccctccaaatagaagaaatggagatggtactaaataaagaggatcttaactca 33441360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 40988819 - 40988775
Alignment:
Q  138 aatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||| |||| |||| | |||||||||||||||||||||||||    
T  40988819 aatggaacaaatagagagaataataaatggagaggatcttaactc 40988775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 45978001 - 45977941
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  45978001 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 45977941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 47 - 182
Target Start/End: Complemental strand, 3057469 - 3057333
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaac-tttttgtgcctttatctctctaaatggaag 145  Q
    |||| |||| |||||||||||||| | ||| |||||| |||||||||||||||||||       ||||| |||||||| ||||||||||| |||||||||    
T  3057469 aaaaaagatgatggatcctaccacaaagtgagttccatcatcattaattattttatacttttttcaaacttttttgtgtctttatctctcaaaatggaag 3057370  T
Q  146 aaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||  |||| |   ||||||||||| |||||||||||    
T  3057369 aaagtgagagaaacataaatggagatgatcttaactc 3057333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 4895731 - 4895891
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       |||| ||||     
T  4895731 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaatttta 4895830  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   ||||||| |||||||| ||||    
T  4895831 tgtgtctttatctctccaaattgaagaaatggagaaacatataaatgaagaggatcctaac 4895891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 29341075 - 29340914
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt 119  Q
    ||||||||||||||||||| ||  || |||||||||| ||| |||||| | || |||||| ||||||||||||||||  || ||       | || ||||    
T  29341075 atgcaatttggagagagatagacacagaaaatagatagtgggtcctactattaagtgggtcccaccatcattaatta-cttgtaagtttttcgaaatttt 29340977  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||  || |||||||| ||||| | |||||||||| | ||||||||||||| |||||||||||    
T  29340976 tgtctctatatctctccaaatgaatgaaatggagagaataataaatggagaagatcttaactc 29340914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 32129639 - 32129773
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcctttatctctctaaatggaag 145  Q
    |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       |||| |||| |||| ||||||||||| |||| ||||    
T  32129639 aaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaag 32129738  T
Q  146 aaatggagatagtaataaatggagaggatcttaac 180  Q
    ||||||||| |   |||||||||||||||| ||||    
T  32129739 aaatggagaaacatataaatggagaggatcctaac 32129773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 35660605 - 35660765
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  35660605 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttta 35660704  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||| ||||| |   |||||| ||||||||||||||    
T  35660705 tgtgtctttatctctccaaattgaagaaacggagaaacacataaatagagaggatcttaac 35660765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 11775872 - 11775796
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||||||||||||||| |||||| ||||| |||||||||||    
T  11775872 tgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccgtcattaattat 11775796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 177
Target Start/End: Complemental strand, 128200 - 128139
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    ||||||||  |||||||||||||||||| |||||||||| | |  |||||||||||||||||    
T  128200 tttttgtgtttttatctctctaaatggaggaaatggagacaattgtaaatggagaggatctt 128139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 97
Target Start/End: Complemental strand, 34827272 - 34827195
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||| |||||||||||| ||   | |||||||||  ||||||||||||||| |||||| |||||||| ||||||||    
T  34827272 atgcaagttggagagagatagacaaaaaaaatagatggtggatcctaccactaagtgggtcccaccatctttaattat 34827195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 181
Target Start/End: Complemental strand, 41660095 - 41660034
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaact 181  Q
    |||| ||||||||||||||||||| ||||||||||  | |||||||||||| ||| ||||||    
T  41660095 tgtgtctttatctctctaaatggaggaaatggagagggaaataaatggagaagattttaact 41660034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 100
Target Start/End: Original strand, 2984389 - 2984465
Alignment:
Q  24 aatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||||||||||||| ||  |||||||||  | ||| |||||| |||||  ||||| ||||||||||||||||||||    
T  2984389 aatttggagagagatagacacataaaataagtgatgaatcctatcactaaatgggtcccaccatcattaattatttt 2984465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 10362009 - 10362089
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||| |||||||||| ||  |||||||| | || |||||||||||| || ||||||  |||| ||||||||||||||    
T  10362009 atgcaattaggagagagatagagacataaaattggtagtggatcctaccattaagtgggtctcaccgtcattaattatttt 10362089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 14349876 - 14349723
Alignment:
Q  27 ttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttttgtgcct 126  Q
    |||||||||||  ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       |||  ||| |||| ||    
T  14349876 ttggagagagacagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttatgtgtct 14349777  T
Q  127 ttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||||| || ||||  |||||||||||| |   ||||||||||| |||||||||    
T  14349776 ttatctttccaaattaaagaaatggagaaacacataaatggagaagatcttaac 14349723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 18625417 - 18625493
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||  ||  || |||||||||  ||| ||||||||||| |||||| |||||||||||||||||    
T  18625417 tgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattat 18625493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 37266810 - 37266734
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||| || |||||||| |||||| |||||||||||||||||    
T  37266810 tgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaattat 37266734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 10173928 - 10173865
Alignment:
Q  119 ttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||| ||||||||||| ||||| | ||||||||||  |  |||||||||||||||||||||||    
T  10173928 ttgtgtctttatctctccaaatgaaggaaatggagaaggacataaatggagaggatcttaactc 10173865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 39902394 - 39902335
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaa 179  Q
    |||| ||||||||||| |||| ||||||||||||| |   ||||||||||||||||||||    
T  39902394 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcttaa 39902335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 43309187 - 43309108
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||| |||||||||||| ||   | |||||||||| |||||| ||||| ||  ||||||||||||||||||||| ||||    
T  43309187 tgcaagttggagagagatagacataaaaaatagatagtggatcttaccattaaatgggttccaccatcattaattttttt 43309108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 180
Target Start/End: Complemental strand, 11775765 - 11775711
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||||||||| |||| ||||||||||||| |   |||||||||||||||||||||    
T  11775765 tttatctctccaaattgaagaaatggagaaacacataaatggagaggatcttaac 11775711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 13032197 - 13032038
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaacttttt 120  Q
    ||||| |||||||||||| ||  ||  ||||||||  ||  |||||||||||  ||||| ||||||||||||||||| || ||        | | ||| |    
T  13032197 tgcaagttggagagagatagacacaagaaatagatggtgagtcctaccactaaatgggtcccaccatcattaattatattttatttttttaagattttat 13032098  T
Q  121 gtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    ||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  13032097 gtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 13032038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 31 - 92
Target Start/End: Complemental strand, 14688643 - 14688582
Alignment:
Q  31 agagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcatta 92  Q
    |||||||| ||  ||||||||||||| ||||| |||||| || |||| ||||||||||||||    
T  14688643 agagagatcgacacataaaatagatattggattctaccattaagtggattccaccatcatta 14688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 25256187 - 25256122
Alignment:
Q  117 ttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||  |||||||||  |||| ||||||||||||| | |||||||| ||||||||||| ||||    
T  25256187 ttttgtgtttttatctcttcaaatagaagaaatggagagactaataaatagagaggatcttgactc 25256122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 25319976 - 25319911
Alignment:
Q  117 ttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||  |||||||||  |||| ||||||||||||| | |||||||| ||||||||||| ||||    
T  25319976 ttttgtgtttttatctcttcaaatagaagaaatggagagactaataaatagagaggatcttgactc 25319911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 93
Target Start/End: Original strand, 27428876 - 27428949
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaa 93  Q
    |||||||||||| |||||| ||  || |||||||||  || ||||||||| || ||| ||||||||||||||||    
T  27428876 atgcaatttggaaagagatagacacaaaaaatagatggtgaatcctaccattaagtgagttccaccatcattaa 27428949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 183
Target Start/End: Complemental strand, 31546467 - 31546402
Alignment:
Q  118 tttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||||| || |||||||| |||| || ||||| |||| | ||||||||||||| ||||||||||||    
T  31546467 tttgtgactatatctctccaaattgatgaaatagagagaataataaatggagatgatcttaactca 31546402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 14733546 - 14733482
Alignment:
Q  119 ttgtgcctttatctctctaaatggaagaaatggagatagtaa-taaatggagaggatcttaactc 182  Q
    ||||| |||||||| ||||||||||||||||||||| |  || |||||| |||||||||| ||||    
T  14733546 ttgtgtctttatctttctaaatggaagaaatggagaaaaaaattaaatgaagaggatcttgactc 14733482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 40753158 - 40753234
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| ||||||| |||| ||  || |||||| ||  ||| ||||||||||| |||||| |||||||||||||||||    
T  40753158 tgcaagttggagaaagatagacacaaaaaatatatggtgggtcctaccactaagtgggtcccaccatcattaattat 40753234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 19901914 - 19902074
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       |||| ||||     
T  19901914 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaatttta 19902013  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| |||||||| |||| |   |||||||||||||||||||||    
T  19902014 tgtgtctttatctctccaaattgaagaaatagagaaacacataaatggagaggatcttaac 19902074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 5763164 - 5763318
Alignment:
Q  27 ttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcc 125  Q
    |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       |||| |||| |||| |    
T  5763164 ttggagagagatagaaacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtc 5763263  T
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||||||||| |||| ||||||||||||| |   ||||||||||| |||| ||||    
T  5763264 tttatctctccaaattgaagaaatggagaaacatataaatggagatgatcctaac 5763318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 1871357 - 1871274
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttata 103  Q
    ||||||||||||||||||| ||   | || ||||||| |||||||||| |||| |||||| ||| |||||||||||||||||||    
T  1871357 atgcaatttggagagagatagacaaaaaatatagatagtggatcctactactaagtgggtcccatcatcattaattattttata 1871274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 56558358 - 56558198
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||| ||||| |||||| ||||||||||||||||| || ||       |||| ||||     
T  56558358 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctatcactaagtgggtcccaccatcattaattatattttacttttttcaaaatttta 56558259  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| |||||||| |||| |   |||||||||||||||| ||||    
T  56558258 tgtgtctttatctctccaaattgaagaaatagagaaacatataaatggagaggatcctaac 56558198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 25442271 - 25442333
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||| ||||||||||| ||||||||||||||||||  |  |||||||||||||||||||||||    
T  25442271 tgtgtctttatctctccaaatggaagaaatggagaaggccataaatggagaggatcttaactc 25442333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 23119486 - 23119543
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||||||||| |||||||||||||||||| | ||||||||||||| |||||| |||||    
T  23119486 tttatctctccaaatggaagaaatggagagactaataaatggagatgatcttgactca 23119543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 34778500 - 34778346
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| ||| |||||||| ||  || |||||||||  ||||||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  34778500 tgcaagttgaagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttta 34778401  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| ||||||||||| | || ||||||||||||| |   |||||||||||||||    
T  34778400 tgtgtctttatctctccacattgaagaaatggagaaacacataaatggagaggat 34778346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 56269072 - 56269217
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    |||||||||||||||||| ||  || ||||||  |  ||| ||||||||||| |||||| |||||||||||||||||||| |           ||||||     
T  56269072 tgcaatttggagagagatagacacaaaaaataagtggtgggtcctaccactaagtgggtcccaccatcattaattatttttt----------tacttttt 56269161  T
Q  120 -tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
     |||| |||||||||||||||||||| ||||||||| | | |||||||||||||||    
T  56269162 atgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 56269217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 4404279 - 4404216
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||| |||||||| |||||||||| ||||||||||  | ||||||||||||||||||| |||||    
T  4404279 tgtgtctttatctttctaaatggaggaaatggagagggaaataaatggagaggatcttgactca 4404216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 23610721 - 23610561
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| || |||||||| |||||| ||||||||||||| ||| || ||       |||  ||||     
T  23610721 tgcaagttggagagagatagacacaaaaaatagatggtgggtcataccactaagtgggtcccaccatcattaaatatattttacttttttcaagatttta 23610622  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||  ||||||||||| |||| ||||||||||||| |   |||||||||||||||||||||    
T  23610621 tgtatctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcttaac 23610561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 31862253 - 31862295
Alignment:
Q  58 tggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||||||||||||| |||||| ||||||||||||||||||||    
T  31862253 tggatcctaccactaagtgggtcccaccatcattaattatttt 31862295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 37002337 - 37002391
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||||||| | | |||||||||||||||    
T  37002337 tgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 37002391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 47922097 - 47922231
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttttgtgcctttatctctctaaatggaag 145  Q
    |||||||||| ||| || |||||||| |||||||||||||||||||| ||| || ||       ||| | |||  ||| |||||||||||||||| ||||    
T  47922097 aaaatagatagtgggtcttaccactaagtgggttccaccatcattaaatatattttatttttttcaatattttacgtgtctttatctctctaaattgaag 47922196  T
Q  146 aaatggagatagtaataaatggagaggatcttaac 180  Q
    ||||||||| |   |||||| ||||||||| ||||    
T  47922197 aaatggagaaacacataaattgagaggatcctaac 47922231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 5416462 - 5416537
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| |||||||||||||||||    
T  5416462 tgcaagttggagagagatagacaca-aaaatagattgtgggtcctaccactaagtgggtcccaccatcattaattat 5416537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 30567980 - 30567904
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| ||| |||||||| ||  || |||||||||  ||| ||||||||||| |||||||||| |||||||||||||    
T  30567980 tgcaagttgaagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggttccatcatcattaattat 30567904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 183
Target Start/End: Original strand, 1015941 - 1016004
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||| ||||||||||||||||||| ||||||||||  | |||||||||||| ||| || |||||    
T  1015941 tgtgtctttatctctctaaatggaggaaatggagagggaaataaatggagaagattttgactca 1016004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 5361432 - 5361378
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||| ||| | | |||||||||||||||    
T  5361432 tgtgtctttatctctctaaatggaacaaatgaagaaatttataaatggagaggat 5361378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 5524436 - 5524382
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||||| | | | |||||||||||||||    
T  5524436 tgtgtctttatctctctaaatggaacaaatggaaaaatttataaatggagaggat 5524382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 5815405 - 5815459
Alignment:
Q  128 tatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||| ||||||||||||||||||  |||  |||||||||||||||| ||||    
T  5815405 tatctctccaaatggaagaaatggagaatgtacaaaatggagaggatcttgactc 5815459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 12312498 - 12312548
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||||||  ||||||||||||||| |||||| ||| |||||||||||||    
T  12312498 aaaatagatggtggatcctaccactaagtgggtcccatcatcattaattat 12312548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 33247126 - 33247284
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaacttttt 120  Q
    ||||| |||||||||||| ||  ||  ||||||||  ||| | |||||||||  ||||||||||||||||||||||| || ||       |  | ||| |    
T  33247126 tgcaagttggagagagatagacacaagaaatagatggtgggttctaccactaaatgggttccaccatcattaattatattttatttttttc-gattttat 33247224  T
Q  121 gtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    ||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  33247225 gtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 33247284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 52552743 - 52552689
Alignment:
Q  129 atctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    ||||||| ||||| | ||||| |||||| ||||||||||| ||||||||||||||    
T  52552743 atctctccaaatgaatgaaatagagataataataaatggataggatcttaactca 52552689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 24073596 - 24073539
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    |||||||| ||||||| ||||||||||||| |||| |   ||||||||||||||||||    
T  24073596 tgtgccttcatctctccaaatggaagaaattgagaaacacataaatggagaggatctt 24073539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 36532702 - 36532626
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||| ||||||||| ||  ||||||||| ||| ||||||||| || |  |||||||||||||| ||||||||||||    
T  36532702 caatttagagagagatagacacataaaataaatagtggatcctatcattcagtgggttccaccat-attaattatttt 36532626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 100
Target Start/End: Original strand, 48914512 - 48914593
Alignment:
Q  19 aatgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||| ||||||||| ||  ||||||||||||  ||| ||||| ||  | ||||||||| | |||||||||||||||    
T  48914512 aatgcaatttagagagagatcgacacataaaatagattgtgggtcctatcataaagtgggttccgctatcattaattatttt 48914593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 56563955 - 56563898
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    |||| |||||||||||||||||||  |||| ||||  | |||||||||||||||||||    
T  56563955 tgtgtctttatctctctaaatggagaaaatagagagggaaataaatggagaggatctt 56563898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 618883 - 618839
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggaga 170  Q
    |||||||||||||||||| ||||||||||  | ||||||||||||    
T  618883 tttatctctctaaatggaggaaatggagagggaaataaatggaga 618839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 12153150 - 12153090
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  12153150 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 12153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 33262548 - 33262624
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| || ||||||||| ||  || |||||||||  |||||||||||||||  | ||| |||||||||||||||||    
T  33262548 tgcaagttagagagagatagacacaaaaaatagatggtggatcctaccactaaataggtcccaccatcattaattat 33262624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 100
Target Start/End: Original strand, 56453815 - 56453895
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||||||||||||||||| ||  || ||||||| |  ||| ||||| || || |||||| ||||||||||| ||||||||    
T  56453815 atgcaatttggagagagatagacacaaaaaataggtggtgggtcctatcattaagtgggtcccaccatcattcattatttt 56453895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 6e-18; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 100
Target Start/End: Complemental strand, 42761791 - 42761713
Alignment:
Q  22 gcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||| |||||||| ||  ||||||||||||| ||||||||||||||  |||||||||| ||||||||||||||||    
T  42761791 gcaatttgaagagagatagacacataaaatagatagtggatcctaccactcagtgggttccatcatcattaattatttt 42761713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 18689571 - 18689495
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    |||||||||||||||||||  |   |||||||||||| |||||||||||| || |||||||||| ||||||||||||    
T  18689571 atgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 18689495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 180
Target Start/End: Original strand, 30426665 - 30426825
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  30426665 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttta 30426764  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||| | |   |||||||||||||||| ||||    
T  30426765 tgtgtctttatctctccaaattgaagaaatggaaaaacacataaatggagaggatcctaac 30426825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 28069798 - 28069641
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||  ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  28069798 tgcaagttggagagagaaagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagatttta 28069699  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    |||| ||||||||||| ||||||||||||| || | |   ||||||||||||||||||    
T  28069698 tgtgtctttatctctccaaatggaagaaattgaaaaacacataaatggagaggatctt 28069641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 22594061 - 22594120
Alignment:
Q  125 ctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactcac 184  Q
    |||||||||||||||| |||||||| |||| | ||| ||||| |||||||||||||||||    
T  22594061 ctttatctctctaaatagaagaaattgagagactaacaaatgaagaggatcttaactcac 22594120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 24241564 - 24241501
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||| ||||||||||||||||||| ||||||||||  | |||||||||||| |||||| |||||    
T  24241564 tgtgtctttatctctctaaatggaggaaatggagagggaaataaatggagaagatcttgactca 24241501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 26749544 - 26749623
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||||| ||  || ||||||  | |||| ||||| ||||| |||||| ||||||||||||||||||||    
T  26749544 tgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattatttt 26749623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 47 - 97
Target Start/End: Complemental strand, 24102069 - 24102019
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||||||  ||||||||||||||| ||| ||||||||||||||||||||    
T  24102069 aaaatagatggtggatcctaccactaagtgagttccaccatcattaattat 24102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 42502989 - 42502934
Alignment:
Q  125 ctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||||| |||||||| |||||||||   |||||||||||||||||||||||||    
T  42502989 ctttatctctccaaatggaaaaaatggagac--taataaatggagaggatcttaactc 42502934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 36991408 - 36991359
Alignment:
Q  48 aaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||||| |||| ||||||||||| |||||| |||||||||||||||||    
T  36991408 aaatagatgatgggtcctaccactaagtgggtcccaccatcattaattat 36991359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 5033085 - 5033025
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||||||||    
T  5033085 tgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagaggatcttaac 5033025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 41511341 - 41511265
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| ||||| |||||| |||  | |||||||||| ||| ||||| ||||| |||| |||||||||||||||||||    
T  41511341 tgcaagttggaaagagatagatataaaaaatagatagtgggtcctatcactaagtggtttccaccatcattaattat 41511265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 44888618 - 44888551
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    ||||| || ||||||||||| |||| ||| ||||||||| | | |||||||||||||||||| |||||    
T  44888618 tttttatgtctttatctctccaaatagaaaaaatggagacaattataaatggagaggatcttcactca 44888551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 97
Target Start/End: Original strand, 10672534 - 10672584
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||||||  ||||||||||||||| ||| || |||||||||||||||||    
T  10672534 aaaatagatggtggatcctaccactaagtgagtcccaccatcattaattat 10672584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 34612552 - 34612498
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||||| | | | |||||||||||||||    
T  34612552 tgtgtctttatctctctaaatggaacaaatggaaaaatttataaatggagaggat 34612498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 21486312 - 21486368
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttata 103  Q
    |||||||||||| |||| |||||||| ||  ||  ||||||||||||||||||||||    
T  21486312 aaaatagataatagatcttaccactaagtaagtctcaccatcattaattattttata 21486368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 24557176 - 24557252
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    |||||||||||| ||||||  |  |||||||||| |||||| |||||||| || ||| || ||| ||||||||||||    
T  24557176 atgcaatttggaaagagatatagacataaaataggtaatgggtcctaccattaagtgagtcccatcatcattaatta 24557252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 28820791 - 28820835
Alignment:
Q  137 aaatggaagaaatggagatagtaataaatggagaggatcttaact 181  Q
    |||||||||||||||||| ||  | ||||||||||||||||||||    
T  28820791 aaatggaagaaatggagaaagatacaaatggagaggatcttaact 28820835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 6e-18; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 29586320 - 29586254
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||| ||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||    
T  29586320 tttttgtgtctttatctctctaaatggatgaaatggagagaataataaatggagatgatcttaactc 29586254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 125 - 182
Target Start/End: Original strand, 550917 - 550974
Alignment:
Q  125 ctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||||| |||||||||||||||||| ||  |||||||||||||||||||||||    
T  550917 ctttatctctccaaatggaagaaatggagaaagacataaatggagaggatcttaactc 550974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 2230062 - 2229986
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || ||||||||| |||| ||||||||||| |||| |||||||||||||||||||    
T  2230062 tgcaagttggagagagatagacacaaaaaatagatgatgggtcctaccactaagtggtttccaccatcattaattat 2229986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 180
Target Start/End: Original strand, 10474433 - 10474594
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt 119  Q
    ||||||||| |||||| || ||  |||||||||||||||||||||||| | || ||| ||||||||| ||||||||| ||| ||        ||| ||||    
T  10474433 atgcaattttgagagatatagacacataaaatagataatggatcctactattaagtgagttccaccaacattaattactttttagttttttgaaattttt 10474532  T
Q  120 -tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
     |||| || |||||||| ||||  | |||||||||| | |||||||||||||| ||||||||    
T  10474533 gtgtgtctatatctctccaaatatatgaaatggagagaataataaatggagagaatcttaac 10474594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 3009228 - 3009169
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaa 179  Q
    |||| |||||||||||||||||||| ||||||||| | | ||||||||||||||||||||    
T  3009228 tgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggatcttaa 3009169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Original strand, 28229479 - 28229546
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||||||| || ||||||||||||||||||||||||| |    | |||||||||||||||||||||||    
T  28229479 tttttgtgtctatatctctctaaatggaagaaatggacaagagattaaatggagaggatcttaactca 28229546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 179
Target Start/End: Complemental strand, 33632902 - 33632743
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnnca-aacttt 118  Q
    ||||||||||||||||||| ||  ||||||||||||| |||||||||| | ||  ||| ||||| |||||||||||| ||| ||        |    |||    
T  33632902 atgcaatttggagagagatagacacataaaatagatagtggatcctactattaaatggattcca-catcattaattactttttagtttttcgattttttt 33632804  T
Q  119 ttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaa 179  Q
    |||||  | |||||||| ||||||| |||||||||| | ||||||||||||||||||||||    
T  33632803 ttgtgtttatatctctccaaatggatgaaatggagagaataataaatggagaggatcttaa 33632743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 31523754 - 31523808
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||||||| | | |||||||||||||||    
T  31523754 tgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 31523808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 43719943 - 43720019
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||| ||  ||| ||||||||||| |||||| |||||||||||||||||    
T  43719943 tgcaagttggagagagatagacacaaaaaataaattgtgggtcctaccactaagtgggtcccaccatcattaattat 43720019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 154
Target Start/End: Original strand, 34373607 - 34373715
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttttgtgcctttatctctctaaatggaag 145  Q
    |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||||||  ||||||||||| |||| ||||    
T  34373607 aaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttttgtctctttatctctccaaattgaag 34373706  T
Q  146 aaatggaga 154  Q
    |||||||||    
T  34373707 aaatggaga 34373715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 42613069 - 42613015
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||| ||| ||||||||| | | |||||||||||||||    
T  42613069 tgtgtctttatctctctaaatagaacaaatggagaaatttataaatggagaggat 42613015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 49679356 - 49679410
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| ||||||||||||||||| || ||||||||| | | |||||||||||||||    
T  49679356 tgtgtctttatctctctaaatgaaacaaatggagaaatttataaatggagaggat 49679410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 50463404 - 50463470
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||| || |||||||  ||||||| | || ||||| | |||||||||||||||||||||||||    
T  50463404 tttttgtgtctatatctctacaaatggatgtaacggagagaataataaatggagaggatcttaactc 50463470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 27033730 - 27033596
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  ||  ||||||||  ||| ||||||||||| |||| | ||||||||||||||||| || ||       ||| | |||     
T  27033730 tgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtggatcccaccatcattaattatattttacttttttcaagatttta 27033631  T
Q  120 tgtgcctttatctctctaaatggaagaaatggaga 154  Q
    |||| ||||||||||| |||| |||||||||||||    
T  27033630 tgtgtctttatctctccaaattgaagaaatggaga 27033596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 27959090 - 27959045
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagag 171  Q
    ||||||||||||||||||| ||||||||| | | ||||||||||||    
T  27959090 tttatctctctaaatggaacaaatggagaaatttataaatggagag 27959045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 96
Target Start/End: Complemental strand, 54911731 - 54911658
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    ||||||| |||||||| ||  |||||||||| || ||| |||||||| ||  || |||||||||||||||||||    
T  54911731 caatttgaagagagatagagacataaaataggtagtgggtcctaccattaaatgagttccaccatcattaatta 54911658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 2310293 - 2310261
Alignment:
Q  117 ttttgtgcctttatctctctaaatggaagaaat 149  Q
    ||||||| |||||||||||||||||||||||||    
T  2310293 ttttgtgtctttatctctctaaatggaagaaat 2310261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 31996845 - 31996801
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggaga 170  Q
    |||||||||| |||| ||||||||||||| | |||||||||||||    
T  31996845 tttatctctccaaatagaagaaatggagacactaataaatggaga 31996801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 34373910 - 34373834
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||| |||||||||||  | ||| |||||||||||||||||    
T  34373910 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccactaattaggtcccaccatcattaattat 34373834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 40851752 - 40851692
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  40851752 tgtgtctttatctctccaaattgaagaaatggagaaatacataaatggagaggatcctaac 40851692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 51982580 - 51982656
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    ||||||||||||||||||| ||| |||||||||| || ||| | ||| || || ||| |||| | ||||||||||||    
T  51982580 atgcaatttggagagagatagatacataaaatagttagtgggttctatcattaagtgagttctatcatcattaatta 51982656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 2e-17; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 4804521 - 4804367
Alignment:
Q  27 ttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcc 125  Q
    |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       |||| |||| |||| |    
T  4804521 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaaaattttatgtgtc 4804422  T
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  4804421 tttatctctccaaattgaagaaatggagaaacatataaatggagaggatcctaac 4804367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 2800609 - 2800686
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||| ||  ||||||||||||| |||||| ||||| || |||||| ||||||||||| ||||||||    
T  2800609 caatttggagagagatagacacataaaatagatagtggatcataccattaagtgggtcccaccatcattgattatttt 2800686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 180
Target Start/End: Original strand, 1249168 - 1249302
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttttgtgcctttatctctctaaatggaag 145  Q
    |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | ||| |||| |||||||| || |||| ||||    
T  1249168 aaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatctttccaaattgaag 1249267  T
Q  146 aaatggagatagtaataaatggagaggatcttaac 180  Q
    ||||||||| |   |||||||||||||||||||||    
T  1249268 aaatggagaaacacataaatggagaggatcttaac 1249302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 182
Target Start/End: Complemental strand, 2720414 - 2720294
Alignment:
Q  59 ggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttttgtgcctttatctctctaaatggaagaaatggagatagt 158  Q
    |||||||||||||| |||||| |||||||||||||||||||||||       ||||| |||||   |||||||||| |||||  |||||||||||||  |    
T  2720414 ggatcctaccactaagtgggtcccaccatcattaattattttata--tttttcaaac-ttttggatctttatctctttaaataaaagaaatggagatgat 2720318  T
Q  159 aataaatggagaggatcttaactc 182  Q
     ||| ||||||||||| |||||||    
T  2720317 catagatggagaggatattaactc 2720294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 96
Target Start/End: Original strand, 7215850 - 7215923
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    |||||||||||||||| ||  ||||||||||||| ||| |||||||||||  ||||| |||| |||||||||||    
T  7215850 caatttggagagagatagacacataaaatagatagtgggtcctaccactaattgggtcccactatcattaatta 7215923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 12412716 - 12412640
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  ||  ||||||||  ||| ||||||||||| ||||||||||||||||||||||||    
T  12412716 tgcaagttggagagagatagacacaagaaatagatggtgggtcctaccactaagtgggttccaccatcattaattat 12412640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 27826608 - 27826460
Alignment:
Q  30 gagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgccttt 128  Q
    ||||||||| ||  || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||        ||  |||| |||| ||||    
T  27826608 gagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttattttttaaaattttttatgtgtcttt 27826509  T
Q  129 atctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    ||||||| ||||||||||||| |||| |   ||||||||||||||||||    
T  27826508 atctctcaaaatggaagaaattgagaaacacataaatggagaggatctt 27826460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 178
Target Start/End: Original strand, 17828563 - 17828722
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt 119  Q
    ||||||||||||||||||| ||  ||||||||||||| ||||| |||| | || |||| | ||| ||||| |||||| ||| ||        ||| ||||    
T  17828563 atgcaatttggagagagatagacacataaaatagatagtggattctactattaagtggatcccatcatcaataattaatttttagttttttgaaattttt 17828662  T
Q  120 -tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatctta 178  Q
     |||| || |||| ||| ||||| | |||||||||| | |||||||||||||||||||||    
T  17828663 gtgtgtctatatcactccaaatgaatgaaatggagagaataataaatggagaggatctta 17828722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 38 - 180
Target Start/End: Complemental strand, 29698225 - 29698082
Alignment:
Q  38 ttgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttttgtgcctttatctctct 136  Q
    ||||| || |||||||||  |||||||||||| || |||||| ||||||||||||||||| || ||       ||| | ||| |||| |||||| ||||     
T  29698225 ttgatacaaaaaatagatggtggatcctaccattaagtgggtcccaccatcattaattatattttacttttttcaagattttatgtgtctttatttctcc 29698126  T
Q  137 aaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||||| |   |||||||||||||||| ||||    
T  29698125 aaattgaagaaatggagaaacacataaatggagaggatcctaac 29698082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 30460995 - 30461061
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||| ||||||| ||||||||||| ||||||||||  | |||||||||||| |||||| ||||    
T  30460995 tttttgtgtctttatcactctaaatggaggaaatggagaaggaaataaatggagatgatcttgactc 30461061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 74 - 180
Target Start/End: Complemental strand, 32737900 - 32737793
Alignment:
Q  74 gtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagagg 172  Q
    |||||||||||||||||||||||| || ||       |||| |||| |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||    
T  32737900 gtgggttccaccatcattaattatattttacttttttcaaaattttatgtgtctttatctctccaaattgaagaaatggagaaacatataaatggagagg 32737801  T
Q  173 atcttaac 180  Q
    ||| ||||    
T  32737800 atcctaac 32737793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 21159365 - 21159441
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| ||||||||| || ||  || |||||||||  ||| ||||||||||| |||||| |||||||||||||||||    
T  21159365 tgcaagttggagagaaatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattat 21159441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 24484958 - 24484879
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||||| ||  || ||||||  |  ||| ||||| ||||| |||||| ||||||||||||||||||||    
T  24484958 tgcaatttggagagagatagacacaaaaaataagtggtgggtcctatcactaagtgggtcccaccatcattaattatttt 24484879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Original strand, 2142379 - 2142429
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggaga 170  Q
    |||| ||||||||||||||||||| ||||||||||  | ||||||||||||    
T  2142379 tgtgtctttatctctctaaatggaggaaatggagagggaaataaatggaga 2142429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 7162163 - 7162029
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  ||  ||||||||  ||| |||||| |||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  7162163 tgcaagttggagagagatagacacaagaaatagatggtgggtcctactactaagtgggtcccaccatcattaattatattttacttttttcaagatttta 7162064  T
Q  120 tgtgcctttatctctctaaatggaagaaatggaga 154  Q
    |||| ||||||||||| |||| |||||||||||||    
T  7162063 tgtgtctttatctctccaaattgaagaaatggaga 7162029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 74 - 103
Target Start/End: Complemental strand, 13324947 - 13324918
Alignment:
Q  74 gtgggttccaccatcattaattattttata 103  Q
    ||||||||||||||||||||||||||||||    
T  13324947 gtgggttccaccatcattaattattttata 13324918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 13089745 - 13089821
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || || ||||||  ||| ||||||||||| |||||  |||||||||||||||||    
T  13089745 tgcaagttggagagagatagacacaaaatatagatggtgggtcctaccactaagtgggccccaccatcattaattat 13089821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 182
Target Start/End: Complemental strand, 29229069 - 29229025
Alignment:
Q  138 aatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||| ||||| |||| | |||||||||||||||||||||||||    
T  29229069 aatggatgaaatcgagagaataataaatggagaggatcttaactc 29229025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 2061351 - 2061294
Alignment:
Q  125 ctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||||    
T  2061351 ctttatctctccaaatggaagaaattgagatactaataaatggagaggatcttaactc 2061294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 182
Target Start/End: Complemental strand, 19908859 - 19908697
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt 119  Q
    ||||||||||||| ||||| ||  ||||||||||||| ||  ||||||   || |||||| |||||||||||||||||||| ||        ||| ||||    
T  19908859 atgcaatttggag-gagatagacacataaaatagatagtgagtcctacttttaagtgggtcccaccatcattaattattttttagtgttttgaaattttt 19908761  T
Q  120 -tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
     |||  || |||||||||||||||| |||||| ||| | |||||||||||||||||||||||||    
T  19908760 gtgtatctatatctctctaaatggatgaaatgaagagaataataaatggagaggatcttaactc 19908697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 4446894 - 4446971
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||||| |||||||| ||  ||||||||||||| |||||||||||||||  |||||| ||| |||||||||||||||    
T  4446894 caatttgaagagagatagacacataaaatagatagtggatcctaccactaattgggtttcactatcattaattatttt 4446971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 100
Target Start/End: Complemental strand, 30709187 - 30709110
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||| ||  ||||||||||||| ||| ||||||||||| |||| | ||||||||||||||| ||||    
T  30709187 caatttggagagagatagacacataaaatagatattgggtcctaccactaagtggatcccaccatcattaattgtttt 30709110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 15709848 - 15709772
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    |||||||||||||||||||  |   |||||||||||| |||||||||||| || |||||||||| ||||||||||||    
T  15709848 atgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 15709772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 35316904 - 35316828
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||||||||||||||| |||||| |||||||||||||||||    
T  35316904 tgcaagttggagagagatagacacaaaaaatagatggtggatcctaccactaagtgggtcccaccatcattaattat 35316828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 174
Target Start/End: Complemental strand, 8988934 - 8988791
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaacttttt 120  Q
    |||||||||||||||||| ||  || ||||||  | || | ||||| ||||| |||||| |||||||||||||||||||| ||            ||| |    
T  8988934 tgcaatttggagagagatagacacaaaaaataagtgataggtcctatcactaagtgggtcccaccatcattaattattttttatt----------tttat 8988845  T
Q  121 gtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    ||| |||||||||||||||||||| ||||||||| | | |||||||||||||||    
T  8988844 gtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 8988791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 13238760 - 13238603
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||||||||| | |||||| ||||||||||||||||| || ||       ||| | |||     
T  13238760 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctaccaccaagtgggtcccaccatcattaattatattttatttttttcaagatttta 13238661  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    |||| ||||||||||| |||| |||||||| |||| |   ||||||||||||||||||    
T  13238660 tgtgtctttatctctccaaattgaagaaattgagaaacgcataaatggagaggatctt 13238603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 30824161 - 30824094
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    |||||||| || |||||||||||||||||||||||||||    | |||||||| ||||||||||||||    
T  30824161 tttttgtgtctatatctctctaaatggaagaaatggagaagagattaaatggaaaggatcttaactca 30824094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 38445574 - 38445637
Alignment:
Q  111 caaactttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    ||||||||||||| |||||||| || |||||||||||||| ||| |||||||| | ||||||||    
T  38445574 caaactttttgtgactttatctttccaaatggaagaaatgaagagagtaataactcgagaggat 38445637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 174
Target Start/End: Complemental strand, 29188642 - 29188588
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||||||| | | |||||||||||||||    
T  29188642 tgtgtctttatctctctaaatggaacaaatggagaaatttataaatggagaggat 29188588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 2805304 - 2805356
Alignment:
Q  118 tttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggaga 170  Q
    |||||| |||||| ||| ||||||||||||||||||| | |||||||||||||    
T  2805304 tttgtgtctttatttctttaaatggaagaaatggagagactaataaatggaga 2805356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 177
Target Start/End: Complemental strand, 28564945 - 28564813
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa--actttttgtgcctttatctctctaaatggaa 144  Q
    |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||        ||  | ||| |||| ||||||||||| |||| |||    
T  28564945 aaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttacttttttaaaagattttatgtgtctttatctctccaaattgaa 28564846  T
Q  145 gaaatggagatagtaataaatggagaggatctt 177  Q
    |||||||||| |   ||||||||||||||||||    
T  28564845 gaaatggagaaacacataaatggagaggatctt 28564813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 171
Target Start/End: Original strand, 42075459 - 42075510
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagag 171  Q
    |||| ||||||||||| |||||||||||||||| | | ||||||||||||||    
T  42075459 tgtgtctttatctctccaaatggaagaaatggataaactaataaatggagag 42075510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 374982 - 374932
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggaga 170  Q
    |||| |||||||||||||||||||| ||||||||| | | |||||||||||    
T  374982 tgtgtctttatctctctaaatggaacaaatggagaaatttataaatggaga 374932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 23459932 - 23459986
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||| ||||||| ||||||||| | | |||||||||||||||    
T  23459932 tgtgtctttatctctctgaatggaacaaatggagaaatttataaatggagaggat 23459986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 36758947 - 36759009
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||| |||||||| ||||||||||| ||||||| | ||| |||||| |||| |||||||||||    
T  36758947 tgtgtctttatctttctaaatggaacaaatggaaaaagttataaatagagaagatcttaactc 36759009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 154
Target Start/End: Original strand, 41073031 - 41073069
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggaga 154  Q
    |||||||| ||||||||||||||||| ||||||||||||    
T  41073031 tttttgtgtctttatctctctaaatgaaagaaatggaga 41073069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Original strand, 21454516 - 21454569
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||  ||| || ||||| || |||||||||||||||||||||||||||    
T  21454516 aaaatagattgtgggtcataccattaagtgggttccaccatcattaattatttt 21454569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 183
Target Start/End: Complemental strand, 1498876 - 1498812
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggaga-tagtaataaatggagaggatcttaactca 183  Q
    ||||||||||||||||||||| ||||| ||||||| ||||   ||||||| |||||||| |||||    
T  1498876 tgtgcctttatctctctaaatagaagatatggagagtagtctaaaatggaaaggatcttgactca 1498812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 30857700 - 30857756
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttata 103  Q
    ||||||||||||||||||||| | ||  ||| |  ||||||||||||||||||||||    
T  30857700 aaaatagataatggatcctactattaaatggatcacaccatcattaattattttata 30857756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 35315283 - 35315359
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    |||||||||| |||||||| ||  |||||||||||||||||||| ||| | ||  || || ||||||| ||||||||    
T  35315283 atgcaatttgaagagagatagacacataaaatagataatggatcttactattaattgagtcccaccattattaatta 35315359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 36929796 - 36929720
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    ||||||||||||||||||| ||  |||||||||| || ||  |||||||| ||  ||| |||| |||||||||||||    
T  36929796 atgcaatttggagagagatagacacataaaataggtagtgtgtcctaccattaaatggattccgccatcattaatta 36929720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 39329928 - 39329980
Alignment:
Q  118 tttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggaga 170  Q
    |||||| ||||||||||| ||||||| ||||| |||| | |||||||||||||    
T  39329928 tttgtgtctttatctctccaaatggatgaaatagagacactaataaatggaga 39329980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 41983435 - 41983495
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| ||||  |||||||||||| |   |||||||||||||||||||||    
T  41983435 tgtgtctttatctctccaaattaaagaaatggagaaacacataaatggagaggatcttaac 41983495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 47 - 178
Target Start/End: Original strand, 22464 - 22596
Alignment:
Q  47 aaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcctttatctctctaaatggaag 145  Q
    |||||||||| ||||||||||||||| ||| ||||||| || ||||||||| || ||       |||  |||| ||||  |||||||||||||||| |||    
T  22464 aaaatagatagtggatcctaccactaagtgagttccacaataattaattatattttacttttttcaagattttatgtgtatttatctctctaaatgtaag 22563  T
Q  146 aaatggagatagtaataaatggagaggatctta 178  Q
    ||||||||||||  ||||||||||| |||||||    
T  22564 aaatggagatagacataaatggagaagatctta 22596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 9559050 - 9559201
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||| || |||||||||  ||| ||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  9559050 tgcaagttggagagagatagatacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattatattttatttttttcaagatttta 9559149  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagag 171  Q
    |||| ||||||||||| ||||||||||||| |||| |   ||||||||||||    
T  9559150 tgtgtctttatctctccaaatggaagaaatcgagaaacatataaatggagag 9559201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 41271855 - 41271789
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||| || ||||||||||||||||||||||||||||||   ||| |||||||||||||||||||||    
T  41271855 tttttttgtctttatctctctaaatggaagaaatggagaagataaaaaatggagaggatcttaactc 41271789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 8608024 - 8607958
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||| || ||||| || |||||||| ||||||||| ||| |||||||||||||||||||||||    
T  8608024 tttttgtgtctctatctttccaaatggaacaaatggagaaagttataaatggagaggatcttaactc 8607958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 4888546 - 4888470
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||| ||| ||||||||||| || ||| |||||||||||||||||    
T  4888546 tgcaagttggagagagatagacacaaaaaatagatagtgggtcctaccactaagtaggtcccaccatcattaattat 4888470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 183
Target Start/End: Complemental strand, 8149604 - 8149536
Alignment:
Q  115 ctttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactca 183  Q
    ||||||||| ||||||||||| |||||| |||||| ||||   |||||||| |||||||||||||||||    
T  8149604 ctttttgtgtctttatctctccaaatggtagaaatagagaggataataaattgagaggatcttaactca 8149536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 50 - 182
Target Start/End: Complemental strand, 29631098 - 29630965
Alignment:
Q  50 atagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt-tgtgcctttatctctctaaatggaagaaa 148  Q
    ||||||| ||| ||| |||||||||| ||| |||| ||||||||||||| | ||       |||| |||| |||| |||||| |||| ||||| ||||||    
T  29631098 atagatagtgggtccaaccactatgtaggtcccactatcattaattattctttacttttttcaaaattttatgtgtctttatatctccaaatgaaagaaa 29630999  T
Q  149 tggagatagtaataaatggagaggatcttaactc 182  Q
    |||||| ||  || ||||||||||||||||||||    
T  29630998 tggagaaagacatgaatggagaggatcttaactc 29630965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 32916152 - 32916104
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||    
T  32916152 tttatctctcaaaatggaagaaatggagaaagttataaatggagaggat 32916104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 21151231 - 21151071
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  ||  ||||||||   |||||||||||||| |||||| ||||||||||||||||| || ||       ||| | |||     
T  21151231 tgcaagttggagagagatagacacaagaaatagatggaggatcctaccactaagtgggtcccaccatcattaattatattttacttttttcaagatttta 21151132  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||| ||| ||||    
T  21151131 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagagaatcctaac 21151071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 21 - 100
Target Start/End: Original strand, 47799896 - 47799975
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||||| ||  || ||||||  | |||| ||||| ||||| |||||| ||||||||||||||||||||    
T  47799896 tgcaatttggagagagatagacacaaaaaataagtgatgggtcctatcactaagtgggtcccaccatcattaattatttt 47799975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 103
Target Start/End: Complemental strand, 989208 - 989126
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttata 103  Q
    |||||||||||||||||| ||  || |||||| ||| ||| ||||||||||| || ||| | ||||| |||||||||||||||    
T  989208 tgcaatttggagagagatagacacaaaaaatatatagtgggtcctaccactaagtaggtccaaccataattaattattttata 989126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 97
Target Start/End: Original strand, 25084730 - 25084800
Alignment:
Q  27 ttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    |||||||||||| ||  || |||||||||  ||| ||||||||||| |||||| |||||||||||||||||    
T  25084730 ttggagagagatagacacaaaaaatagatggtgggtcctaccactaagtgggtcccaccatcattaattat 25084800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 30153177 - 30153339
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt 119  Q
    |||||||||| |||||||| || ||||| ||| |||||||    ||| ||||| ||| || | |||||||||||||||||||||       |||  ||||    
T  30153177 atgcaatttgaagagagatagacgcatataattgataatgagctctagcactaagtgagtactaccatcattaattattttatatttttttcaatttttt 30153276  T
Q  120 tgt-gcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    | | | ||||||||||| ||||||||||| || ||||  | |||||||||||||||||||||||    
T  30153277 ttttgtctttatctctccaaatggaagaa-tgaagatgatcataaatggagaggatcttaactc 30153339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 21 - 154
Target Start/End: Complemental strand, 7362647 - 7362513
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaa-actttt 119  Q
    ||||| |||||||||||| ||  || |||||||||  ||| || ||||||||  ||||||||||||||||||||||| || ||       ||| | |||     
T  7362647 tgcaaattggagagagatagacacaaaaaatagatggtgggtcgtaccactaaatgggttccaccatcattaattatattttacttttttcaagatttta 7362548  T
Q  120 tgtgcctttatctctctaaatggaagaaatggaga 154  Q
    |||| ||||||||||| |||| |||||||||||||    
T  7362547 tgtgtctttatctctccaaattgaagaaatggaga 7362513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 40023254 - 40023331
Alignment:
Q  23 caatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    ||||||||||| |||| ||   ||||||||| ||||||||| ||||| || |||||| |||||| |||||||||||||    
T  40023254 caatttggagaaagatagacatataaaatagttaatggatcttaccattaagtgggtcccaccaccattaattatttt 40023331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 174
Target Start/End: Original strand, 19889030 - 19889174
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaacttttt 120  Q
    |||||||| || |||||| ||| || ||||||  |  ||| ||||| ||||| ||||||||||||||||||||||||||| ||            ||| |    
T  19889030 tgcaatttagaaagagatagatacaaaaaataagttgtgggtcctatcactaagtgggttccaccatcattaattattttttactt---------tttat 19889120  T
Q  121 gtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    ||| |||||||||||||||||||| ||||||||| | | ||| |||||||||||    
T  19889121 gtgtctttatctctctaaatggaataaatggagaaatttatagatggagaggat 19889174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 116 - 183
Target Start/End: Complemental strand, 32915942 - 32915875
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagta-ataaatggagaggatcttaactca 183  Q
    |||||||| ||||||||||| |||||||||||||||||| || | |||||||| |||||||||| ||||    
T  32915942 tttttgtgtctttatctctccaaatggaagaaatggaga-agaacataaatggggaggatcttagctca 32915875  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 45260423 - 45260499
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||||||||||||||| |||| | ||| |||||||||||||    
T  45260423 tgcaagttggagagagatagacacaaaaaatagattgtggatcctaccactaagtggatcccatcatcattaattat 45260499  T

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Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 182
Target Start/End: Original strand, 5464007 - 5464061
Alignment:
Q  128 tatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    |||||||| ||||| | |||||||||| | |||||||||||||| ||||||||||    
T  5464007 tatctctccaaatgaatgaaatggagagaataataaatggagagaatcttaactc 5464061  T

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Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 11828946 - 11828984
Alignment:
Q  62 tcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||| || |||||||||||||||||||||||||||    
T  11828946 tcctaccattaagtgggttccaccatcattaattatttt 11828984  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Complemental strand, 23311491 - 23311425
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||  |||||||||| ||||| |||||||||||  | |||||||| |||||||| |||||||    
T  23311491 tttttgtgtttttatctctccaaatgaaagaaatggagtgactaataaatagagaggattttaactc 23311425  T

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Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 48839857 - 48839923
Alignment:
Q  116 tttttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||| || ||||||||||| ||||||| |||||||||| ||| |||||| ||||| |||| |||||    
T  48839857 tttttttgtctttatctctccaaatggacgaaatggagagagttataaatagagagcatctaaactc 48839923  T

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Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 97
Target Start/End: Complemental strand, 16366570 - 16366521
Alignment:
Q  48 aaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||||||  ||||||||||||||| ||| || |||||||||||||||||    
T  16366570 aaatagatggtggatcctaccactaagtgtgtcccaccatcattaattat 16366521  T

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Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 18064543 - 18064494
Alignment:
Q  128 tatctctctaaatggaagaaatggagatagtaataaatggagaggatctt 177  Q
    ||||||||||||| |||||||||||||  |||  ||||||||||||||||    
T  18064543 tatctctctaaatagaagaaatggagaaggtacaaaatggagaggatctt 18064494  T

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Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 182
Target Start/End: Original strand, 48831287 - 48831341
Alignment:
Q  126 tttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||| |||||||||| |||||||||| |  ||||||||||||||||||| ||||    
T  48831287 tttatctttctaaatggaggaaatggagaga--aataaatggagaggatcttgactc 48831341  T

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Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 33450586 - 33450506
Alignment:
Q  21 tgcaatttggagagagattgatgcataa-aatagataatggatcctaccactatgtgggttccaccatcattaattatttt 100  Q
    |||||||||||||||||| ||  || || |||||||  ||| ||| ||||||| |||||| ||| ||||||||||||||||    
T  33450586 tgcaatttggagagagatagacacaaaagaatagatggtgggtccaaccactaagtgggtcccatcatcattaattatttt 33450506  T

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Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 39855812 - 39855884
Alignment:
Q  24 aatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    ||||||||||||||| ||  ||||||| ||||  | | ||||||||||| |||||| ||| ||||||||||||    
T  39855812 aatttggagagagatagacacataaaaaagatggtcggtcctaccactaagtgggtcccatcatcattaatta 39855884  T

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Target: scaffold0062 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 96
Target Start/End: Complemental strand, 58760 - 58684
Alignment:
Q  20 atgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaatta 96  Q
    |||||||||||||||||||  |   |||||||||||| |||||||||||| || |||||||||| ||||||||||||    
T  58760 atgcaatttggagagagataaacatataaaatagatagtggatcctaccattaagtgggttccatcatcattaatta 58684  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 182
Target Start/End: Original strand, 9197 - 9356
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaacttttt 120  Q
    ||||| |||||||||||| ||  || |||||||||  ||| ||| ||||||| |||| ||||||||||||||||||| ||||         | | ||  |    
T  9197 tgcaagttggagagagatagacacagaaaatagatggtgggtccaaccactaagtggattccaccatcattaattatattattttttta--agatttcat 9294  T
Q  121 gtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaactc 182  Q
    ||||||||||||||| ||||||||||||| |||| |   |||||||||||||||||| ||||    
T  9295 gtgcctttatctctccaaatggaagaaattgagaaacacataaatggagaggatcttcactc 9356  T

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Target: scaffold0250 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 97
Target Start/End: Complemental strand, 7226 - 7150
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||||||  ||| |||||| | || ||||||||||||||||||||||||    
T  7226 tgcaagttggagagagatagacacaaaaaatagatggtgggtcctactattaagtgggttccaccatcattaattat 7150  T

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Target: scaffold0012 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 180
Target Start/End: Complemental strand, 208142 - 207982
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattattttatannnnnnncaaactttt- 119  Q
    ||||| ||||||||||||  |  || |||||||||  ||| ||||||||||| |||||| ||| ||||||||||||| || ||        ||  ||||     
T  208142 tgcaagttggagagagataaacacaaaaaatagatggtgggtcctaccactaagtgggtcccatcatcattaattatattttactttttttaagatttta 208043  T
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatcttaac 180  Q
    |||| ||||||||||| |||| ||||||||||||| |   |||||||||||||||| ||||    
T  208042 tgtgtctttatctctccaaattgaagaaatggagaaacacataaatggagaggatcctaac 207982  T

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Target: scaffold0468 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 175
Target Start/End: Complemental strand, 5625 - 5534
Alignment:
Q  85 catcattaattattttatannnnnnncaaactt-tttgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggatc 175  Q
    |||||||||||||||||||       ||||||| ||| || ||||||||||| |||||||||||||| |||   | ||||||||||||||||    
T  5625 catcattaattattttatacttttttcaaacttctttatgtctttatctctccaaatggaagaaatgaagaggatcataaatggagaggatc 5534  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 174
Target Start/End: Original strand, 17392 - 17446
Alignment:
Q  120 tgtgcctttatctctctaaatggaagaaatggagatagtaataaatggagaggat 174  Q
    |||| |||||||||||||||||||| ||||| ||| | | |||||||||||||||    
T  17392 tgtgtctttatctctctaaatggaacaaatgaagaaatttataaatggagaggat 17446  T

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Target: scaffold0035 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 97
Target Start/End: Original strand, 16393 - 16469
Alignment:
Q  21 tgcaatttggagagagattgatgcataaaatagataatggatcctaccactatgtgggttccaccatcattaattat 97  Q
    ||||| |||||||||||| ||  || |||||| ||  ||| ||||||||||| |||||| ||| |||||||||||||    
T  16393 tgcaagttggagagagatagacacaaaaaataaatggtgggtcctaccactaagtgggtcccatcatcattaattat 16469  T

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