View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3555_low_6 (Length: 290)

Name: NF3555_low_6
Description: NF3555
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3555_low_6
NF3555_low_6
[»] chr1 (43 HSPs)
chr1 (1-272)||(17055659-17055932)
chr1 (23-234)||(16125232-16125447)
chr1 (29-239)||(23528799-23529013)
chr1 (60-235)||(21846050-21846227)
chr1 (23-218)||(19009741-19009938)
chr1 (83-237)||(13100388-13100545)
chr1 (23-239)||(9351835-9352055)
chr1 (31-228)||(9954816-9955019)
chr1 (100-236)||(14074258-14074397)
chr1 (23-237)||(25146542-25146761)
chr1 (60-237)||(17869524-17869703)
chr1 (28-237)||(18304592-18304798)
chr1 (60-242)||(16434685-16434869)
chr1 (23-234)||(47785996-47786209)
chr1 (1-153)||(27917233-27917384)
chr1 (23-239)||(42179843-42180057)
chr1 (86-237)||(41032547-41032701)
chr1 (23-169)||(13276112-13276258)
chr1 (1-115)||(12002771-12002888)
chr1 (84-202)||(9128647-9128768)
chr1 (79-164)||(32881514-32881600)
chr1 (23-237)||(12513418-12513626)
chr1 (99-242)||(30619156-30619300)
chr1 (1-120)||(18891488-18891609)
chr1 (1-120)||(18337186-18337300)
chr1 (130-234)||(17197306-17197413)
chr1 (69-153)||(18228448-18228532)
chr1 (1-84)||(24117609-24117694)
chr1 (183-237)||(9954770-9954824)
chr1 (1-114)||(17197441-17197556)
chr1 (151-238)||(27502128-27502217)
chr1 (60-119)||(9327109-9327166)
chr1 (125-234)||(12002638-12002748)
chr1 (61-114)||(8773432-8773484)
chr1 (86-123)||(9327209-9327246)
chr1 (86-123)||(9955029-9955066)
chr1 (86-123)||(12513379-12513416)
chr1 (86-123)||(13100289-13100326)
chr1 (170-237)||(13276033-13276097)
chr1 (84-121)||(17055995-17056032)
chr1 (86-123)||(19009940-19009977)
chr1 (151-196)||(9321550-9321597)
chr1 (70-114)||(39845168-39845212)
[»] chr2 (34 HSPs)
chr2 (3-236)||(25538920-25539158)
chr2 (79-237)||(19262090-19262251)
chr2 (79-237)||(20063917-20064078)
chr2 (79-237)||(31237750-31237911)
chr2 (5-170)||(16766904-16767071)
chr2 (83-236)||(30433013-30433169)
chr2 (87-236)||(1404985-1405137)
chr2 (1-170)||(27406905-27407077)
chr2 (60-239)||(13502446-13502627)
chr2 (6-153)||(5395384-5395532)
chr2 (1-237)||(974438-974694)
chr2 (1-237)||(21869095-21869350)
chr2 (37-236)||(8428372-8428576)
chr2 (29-152)||(35565819-35565940)
chr2 (8-237)||(7301895-7302137)
chr2 (130-226)||(27523881-27523980)
chr2 (23-212)||(15588654-15588842)
chr2 (1-120)||(19492046-19492168)
chr2 (6-237)||(19245702-19245944)
chr2 (1-115)||(41002126-41002242)
chr2 (11-120)||(34841705-34841816)
chr2 (130-229)||(20034004-20034106)
chr2 (60-190)||(36430024-36430156)
chr2 (1-120)||(24473933-24474056)
chr2 (1-114)||(31023417-31023531)
chr2 (8-115)||(20034134-20034243)
chr2 (1-115)||(34577992-34578106)
chr2 (79-166)||(1690575-1690663)
chr2 (60-120)||(19519549-19519609)
chr2 (3-115)||(26251628-26251746)
chr2 (23-120)||(31578141-31578238)
chr2 (86-123)||(31237971-31238008)
chr2 (3-115)||(27524008-27524122)
chr2 (130-202)||(34578134-34578209)
[»] chr4 (35 HSPs)
chr4 (1-201)||(8010946-8011151)
chr4 (3-237)||(6346729-6346968)
chr4 (37-238)||(9770263-9770468)
chr4 (60-237)||(5375840-5376020)
chr4 (23-236)||(9911186-9911403)
chr4 (28-236)||(36120966-36121177)
chr4 (1-170)||(9149565-9149738)
chr4 (60-235)||(23064737-23064914)
chr4 (1-170)||(7044877-7045049)
chr4 (3-237)||(7045058-7045299)
chr4 (1-239)||(55476089-55476345)
chr4 (23-170)||(10143036-10143186)
chr4 (37-240)||(24719725-24719926)
chr4 (1-238)||(7452624-7452861)
chr4 (1-127)||(4156967-4157094)
chr4 (60-237)||(10394786-10394965)
chr4 (23-151)||(17466216-17466345)
chr4 (71-216)||(5361760-5361908)
chr4 (1-237)||(18459405-18459631)
chr4 (97-236)||(37240450-37240593)
chr4 (71-237)||(8889412-8889571)
chr4 (9-114)||(18403650-18403757)
chr4 (1-53)||(7803210-7803262)
chr4 (1-53)||(7825164-7825216)
chr4 (32-114)||(5884193-5884277)
chr4 (1-53)||(7815761-7815813)
chr4 (30-114)||(8409725-8409810)
chr4 (97-235)||(13551448-13551589)
chr4 (3-101)||(5943160-5943259)
chr4 (151-190)||(8367469-8367510)
chr4 (81-123)||(9911405-9911447)
chr4 (169-227)||(13023845-13023903)
chr4 (60-120)||(8367364-8367424)
chr4 (1-120)||(8743672-8743794)
chr4 (60-120)||(20812706-20812765)
[»] chr6 (33 HSPs)
chr6 (63-236)||(3573674-3573851)
chr6 (23-239)||(7223649-7223872)
chr6 (23-237)||(7918124-7918340)
chr6 (60-237)||(19748509-19748688)
chr6 (23-233)||(26053074-26053288)
chr6 (23-233)||(26073127-26073341)
chr6 (74-237)||(22498214-22498380)
chr6 (79-237)||(11327336-11327497)
chr6 (79-237)||(17543504-17543665)
chr6 (83-237)||(17103393-17103550)
chr6 (23-237)||(23897948-23898165)
chr6 (87-218)||(15527903-15528037)
chr6 (60-239)||(27233071-27233252)
chr6 (60-170)||(4841672-4841783)
chr6 (84-236)||(30912181-30912336)
chr6 (84-179)||(2912093-2912191)
chr6 (3-239)||(27890488-27890743)
chr6 (60-145)||(10508886-10508971)
chr6 (151-233)||(27614434-27614518)
chr6 (1-238)||(33592924-33593180)
chr6 (1-120)||(20432500-20432622)
chr6 (9-115)||(5422564-5422665)
chr6 (1-115)||(18490538-18490654)
chr6 (5-106)||(20399994-20400099)
chr6 (151-239)||(21354942-21355032)
chr6 (1-120)||(31407408-31407531)
chr6 (79-237)||(17250250-17250412)
chr6 (172-231)||(31108445-31108504)
chr6 (1-120)||(31108257-31108377)
chr6 (43-120)||(4596761-4596843)
chr6 (86-123)||(7223610-7223647)
chr6 (87-123)||(23897910-23897946)
chr6 (125-233)||(33583444-33583555)
[»] chr7 (47 HSPs)
chr7 (1-236)||(26565323-26565562)
chr7 (83-236)||(17811546-17811702)
chr7 (79-236)||(24989549-24989708)
chr7 (23-236)||(5058666-5058882)
chr7 (23-236)||(44944620-44944837)
chr7 (73-236)||(5715473-5715635)
chr7 (23-234)||(20570662-20570877)
chr7 (60-238)||(4247532-4247712)
chr7 (60-166)||(7730206-7730313)
chr7 (86-237)||(39182357-39182511)
chr7 (79-170)||(8329887-8329979)
chr7 (86-238)||(11326484-11326639)
chr7 (60-170)||(8346374-8346485)
chr7 (81-236)||(14055453-14055610)
chr7 (81-236)||(14365481-14365638)
chr7 (60-170)||(30294421-30294532)
chr7 (23-170)||(24725315-24725469)
chr7 (84-170)||(8329822-8329909)
chr7 (125-234)||(8304326-8304438)
chr7 (70-237)||(8572323-8572491)
chr7 (23-229)||(27221555-27221762)
chr7 (1-237)||(1981099-1981351)
chr7 (60-165)||(27509260-27509364)
chr7 (85-170)||(8343645-8343731)
chr7 (8-237)||(25842505-25842752)
chr7 (23-153)||(11325115-11325246)
chr7 (83-166)||(21846294-21846378)
chr7 (84-166)||(8346313-8346396)
chr7 (1-120)||(17809021-17809142)
chr7 (60-235)||(4574892-4575083)
chr7 (71-170)||(6916965-6917064)
chr7 (79-236)||(22687042-22687194)
chr7 (97-212)||(1977761-1977878)
chr7 (1-115)||(23618341-23618457)
chr7 (60-149)||(26617342-26617429)
chr7 (38-115)||(8254018-8254096)
chr7 (60-120)||(8629635-8629694)
chr7 (97-235)||(9685070-9685211)
chr7 (60-120)||(7307173-7307232)
chr7 (130-236)||(21157475-21157577)
chr7 (1-94)||(21157603-21157697)
chr7 (64-120)||(26340279-26340335)
chr7 (157-237)||(10285677-10285759)
chr7 (130-236)||(23618204-23618313)
chr7 (81-123)||(27221511-27221553)
chr7 (86-123)||(22687658-22687695)
chr7 (151-236)||(26281165-26281250)
[»] chr5 (26 HSPs)
chr5 (23-235)||(18843852-18844068)
chr5 (23-238)||(19579079-19579300)
chr5 (83-236)||(20321141-20321297)
chr5 (1-208)||(24648131-24648335)
chr5 (60-236)||(41688441-41688618)
chr5 (79-240)||(43235062-43235226)
chr5 (79-236)||(27339962-27340122)
chr5 (60-236)||(43005634-43005813)
chr5 (1-237)||(41427519-41427774)
chr5 (60-237)||(18051307-18051486)
chr5 (38-236)||(15051872-15052081)
chr5 (73-237)||(22645501-22645662)
chr5 (60-166)||(38158111-38158216)
chr5 (23-238)||(23172217-23172420)
chr5 (30-170)||(26021464-26021605)
chr5 (84-153)||(21059018-21059087)
chr5 (85-233)||(19042206-19042356)
chr5 (1-236)||(19377713-19377957)
chr5 (171-237)||(6852340-6852406)
chr5 (60-117)||(9996880-9996937)
chr5 (1-120)||(30804037-30804158)
chr5 (1-169)||(30799506-30799682)
chr5 (1-115)||(15446311-15446429)
chr5 (69-128)||(19979790-19979848)
chr5 (84-123)||(22645713-22645752)
chr5 (1-115)||(22984713-22984830)
[»] scaffold0186 (1 HSPs)
scaffold0186 (23-237)||(8580-8796)
[»] scaffold0603 (1 HSPs)
scaffold0603 (3-169)||(8803-8972)
[»] chr3 (50 HSPs)
chr3 (23-237)||(28745913-28746131)
chr3 (74-241)||(24619967-24620137)
chr3 (72-237)||(29067464-29067631)
chr3 (1-233)||(27676551-27676787)
chr3 (64-237)||(13286123-13286299)
chr3 (60-237)||(25870096-25870275)
chr3 (60-236)||(17064483-17064661)
chr3 (23-233)||(39428039-39428258)
chr3 (61-236)||(10872490-10872668)
chr3 (63-238)||(28135940-28136118)
chr3 (60-237)||(3449084-3449262)
chr3 (79-236)||(22355841-22355997)
chr3 (64-170)||(6136412-6136519)
chr3 (8-237)||(8592173-8592421)
chr3 (60-190)||(20756198-20756330)
chr3 (23-165)||(42696984-42697129)
chr3 (23-239)||(9152758-9152975)
chr3 (28-153)||(22137419-22137545)
chr3 (3-170)||(17796685-17796851)
chr3 (3-170)||(19105125-19105291)
chr3 (126-237)||(22971050-22971163)
chr3 (1-115)||(19348654-19348770)
chr3 (79-162)||(8155980-8156063)
chr3 (131-229)||(3041469-3041570)
chr3 (172-238)||(24649522-24649588)
chr3 (32-114)||(6861039-6861123)
chr3 (151-237)||(8560231-8560319)
chr3 (157-239)||(20766673-20766757)
chr3 (132-237)||(41671426-41671534)
chr3 (23-165)||(15515106-15515248)
chr3 (151-236)||(18014258-18014345)
chr3 (1-115)||(18014094-18014208)
chr3 (125-233)||(21553671-21553781)
chr3 (60-111)||(15806286-15806337)
chr3 (151-235)||(19348820-19348906)
chr3 (1-115)||(22970909-22971026)
chr3 (32-115)||(9169806-9169890)
chr3 (158-229)||(9169869-9169942)
chr3 (60-114)||(10591808-10591861)
chr3 (79-153)||(21963625-21963699)
chr3 (79-153)||(21986061-21986135)
chr3 (170-232)||(27055381-27055443)
chr3 (73-117)||(22494679-22494723)
chr3 (60-115)||(3041386-3041440)
chr3 (185-236)||(6860986-6861037)
chr3 (68-115)||(21553804-21553850)
chr3 (5-63)||(10872817-10872875)
chr3 (86-123)||(8156124-8156161)
chr3 (63-120)||(26208228-26208285)
chr3 (158-216)||(30727654-30727714)
[»] scaffold0016 (1 HSPs)
scaffold0016 (60-237)||(56199-56379)
[»] chr8 (35 HSPs)
chr8 (23-237)||(11879737-11879955)
chr8 (23-237)||(11897153-11897371)
chr8 (73-238)||(29384085-29384253)
chr8 (1-239)||(15761130-15761375)
chr8 (60-232)||(45403205-45403379)
chr8 (23-234)||(5922186-5922400)
chr8 (23-237)||(7489057-7489275)
chr8 (23-236)||(23142312-23142528)
chr8 (60-237)||(6810997-6811174)
chr8 (79-236)||(17647191-17647351)
chr8 (7-237)||(17566230-17566453)
chr8 (60-153)||(8582218-8582311)
chr8 (99-236)||(24414062-24414202)
chr8 (73-216)||(19704252-19704398)
chr8 (61-169)||(24056414-24056523)
chr8 (60-191)||(15294846-15294978)
chr8 (60-191)||(15475215-15475347)
chr8 (1-135)||(1018060-1018196)
chr8 (1-120)||(26575017-26575140)
chr8 (126-229)||(16752264-16752370)
chr8 (73-236)||(31424355-31424518)
chr8 (60-120)||(30240264-30240324)
chr8 (99-242)||(22909973-22910118)
chr8 (99-153)||(15231835-15231889)
chr8 (130-227)||(2040364-2040464)
chr8 (23-165)||(3094092-3094235)
chr8 (151-237)||(40541594-40541682)
chr8 (85-189)||(32424534-32424641)
chr8 (23-121)||(27836357-27836456)
chr8 (60-115)||(2040282-2040336)
chr8 (86-123)||(15294768-15294805)
chr8 (86-123)||(15475137-15475174)
chr8 (60-120)||(26879749-26879810)
chr8 (151-236)||(19335243-19335329)
chr8 (130-190)||(7262007-7262070)
[»] scaffold0534 (1 HSPs)
scaffold0534 (7-237)||(802-1025)
[»] scaffold0417 (1 HSPs)
scaffold0417 (60-198)||(7268-7408)
[»] scaffold0042 (2 HSPs)
scaffold0042 (21-169)||(93549-93700)
scaffold0042 (87-123)||(93700-93736)
[»] scaffold0048 (2 HSPs)
scaffold0048 (60-171)||(48504-48616)
scaffold0048 (60-236)||(61089-61268)
[»] scaffold0510 (1 HSPs)
scaffold0510 (86-212)||(3-131)
[»] scaffold0079 (2 HSPs)
scaffold0079 (130-237)||(14700-14810)
scaffold0079 (68-115)||(14838-14884)
[»] scaffold0017 (2 HSPs)
scaffold0017 (130-237)||(38301-38410)
scaffold0017 (1-82)||(38475-38560)
[»] scaffold2084 (1 HSPs)
scaffold2084 (151-237)||(95-183)
[»] scaffold1178 (1 HSPs)
scaffold1178 (30-115)||(466-552)
[»] scaffold0526 (2 HSPs)
scaffold0526 (125-241)||(8396-8515)
scaffold0526 (30-115)||(8288-8373)
[»] scaffold0061 (1 HSPs)
scaffold0061 (130-239)||(76081-76192)
[»] scaffold0028 (1 HSPs)
scaffold0028 (79-236)||(145777-145942)
[»] scaffold0259 (1 HSPs)
scaffold0259 (60-120)||(18559-18619)
[»] scaffold0182 (1 HSPs)
scaffold0182 (130-229)||(24631-24733)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-115)||(133027-133143)
[»] scaffold0115 (1 HSPs)
scaffold0115 (1-94)||(34909-35004)
[»] scaffold0684 (1 HSPs)
scaffold0684 (8-115)||(5124-5233)
[»] scaffold0163 (1 HSPs)
scaffold0163 (60-115)||(2940-2994)


Alignment Details
Target: chr1 (Bit Score: 200; Significance: 1e-109; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 17055932 - 17055659
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccattt 100  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17055932 tgtataagtattttgtggactttaaattgagtcatatatgactatatataatttatagcatatttagcattatttttgttttggtaaaatccatccattt 17055833  T
Q  101 tgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattc 197  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| || |    
T  17055832 tgattgcaattttacaatttcttgtatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttacaatcc 17055733  T
Q  198 cctttagacctgaagtaaagttccgattttgacaaccttgattgacacattgttgcgtactagttgggatgtttt 272  Q
    ||||| ||||| ||||||||  ||||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  17055732 cctttcgacct-aagtaaagacccgattttgacaaccttgattgacacattgttgcgtaatagttgagatgtttt 17055659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 16125447 - 16125232
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||| ||||||| ||| ||| |||||  |||| |||||| || ||| |||||  |||||| ||||||||||||||||||||||||    
T  16125447 taaactaagtcatttatgaatatataccatttataacatatatttagtattattatt-tttgggtaacgtccatcgattttgattgcgattttacaattt 16125349  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||| |||||||||| ||  ||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||| ||||||||||||||    
T  16125348 cttatatcgattctacaaatgtccttgagtaaaatccttcgattttgattgcgattttacgagtcccaattttactattccctttcgacctgaagtaaag 16125249  T
Q  218 ttccgattttgacaacc 234  Q
    |||||||||| ||||||    
T  16125248 ttccgattttaacaacc 16125232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 29 - 239
Target Start/End: Original strand, 23528799 - 23529013
Alignment:
Q  29 aagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgta 126  Q
    ||||||| ||||||||||||| ||| ||| |  |||||||  |||||| || ||  ||||||||||||| ||||||||||||||||||||||||| | ||    
T  23528799 aagtcatttatgactatataccatttataacgtatatttattattattattattg-ggtaaaatccatcgattttgattgcgattttacaatttcctata 23528897  T
Q  127 tcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccga 223  Q
    || |||||||||||||  |||||| |||||||||||||||||||  |||||||||||||||||| ||||| |||| |||  ||||||| |||||||||||    
T  23528898 tcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgatcttactgttcctttttaacctgaaataaagttccga 23528997  T
Q  224 ttttgacaaccttgat 239  Q
    ||||||||||||||||    
T  23528998 ttttgacaaccttgat 23529013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 21846227 - 21846050
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||| |||| ||| |||||||| |||| ||||||||||||||||||||||||||| |||| |||||||||||||  |||||| ||||||||    
T  21846227 atatttagtattaatttt-tttgggtaaaattcatctattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatcctt 21846129  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacct 235  Q
    |||||||||||  ||||||| ||||||||||||| ||||||||||| |||||| |||||||| | ||||||||||||||    
T  21846128 cgattttgattgcgattttaagagtcccgattttgctattccctttcgacctggagtaaagtcctgattttgacaacct 21846050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 19009938 - 19009741
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttct 122  Q
    ||||||||||||| ||| ||||||||| ||| ||| ||||||||  ||| ||||| ||  |||||||||||   |||||||||||||||||||||||||     
T  19009938 taaattaagtcatttataactatataccatttataacatatttaatatttttttt-ttggggtaaaatccaatgattttgattgcgattttacaatttcc 19009840  T
Q  123 tgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagt 218  Q
    | |||| ||| |||||||||  ||||||||| ||||| |||||||||||  |||||||||||||||||||| ||||||||||| || ||||||||||||    
T  19009839 tatatcgattttacaaaagttcttgagtaaaatcctttgattttgattgcgattttacgagtcccgattttgctattccctttcgatctgaagtaaagt 19009741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 13100388 - 13100545
Alignment:
Q  83 ggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacga 179  Q
    ||||||||||||| ||||||||||||||||||  ||||||| |||| |||||||||| ||  ||||||||| ||||| |||||||||||  |||||||||    
T  13100388 ggtaaaatccatcgattttgattgcgattttaagatttcttatatcgattctacaaatgtccttgagtaaaatcctttgattttgattgcgattttacga 13100487  T
Q  180 gtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    || |||||||| | ||||||||| ||| ||||||||||| ||||||||||||||||||    
T  13100488 gttccgattttgccattccctttcgacttgaagtaaagtcccgattttgacaaccttg 13100545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 9352055 - 9351835
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| | ||||||||||| ||| ||| |||||  |||| |||| |||| ||| |||||||| |||| |||||||||| |||||||||||||    
T  9352055 taaactaagtcatttttgactatataccatttataacatatatttagtattaatttt-tttgggtaaaattcatcgattttgattgtgattttacaattt 9351957  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |||  |||||||||||||  |||  |||| |||| ||||||||||||  |||||||||||||||||||| |||||| |||| ||||||||||||||    
T  9351956 cctatatagattctacaaaagtccttggataaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttcgacctgaagtaaag 9351857  T
Q  218 ttccgattttgacaaccttgat 239  Q
    |   ||||||||||||||||||    
T  9351856 tcttgattttgacaaccttgat 9351835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 31 - 228
Target Start/End: Complemental strand, 9955019 - 9954816
Alignment:
Q  31 gtcatatatgactatatacaattaatagcatattt--agcattatttttgttttg-gtaaaatccatccattttgattgcgattttacaatttcttgtat 127  Q
    ||||| ||||||||||||| ||| ||| ||||| |  || |||||| || ||||| |||||||||||| || |||||||||||||||||||||| | |||    
T  9955019 gtcatttatgactatataccatttataacatatattcagtattattatttttttgtgtaaaatccatcgatcttgattgcgattttacaatttcctatat 9954920  T
Q  128 caattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgat 224  Q
      |||||  ||||||  ||  || |||||||||||||||||||  ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||||    
T  9954919 ggattcttgaaaagtcctttggtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgaccttaagtaaagttccgat 9954820  T
Q  225 tttg 228  Q
    ||||    
T  9954819 tttg 9954816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 100 - 236
Target Start/End: Complemental strand, 14074397 - 14074258
Alignment:
Q  100 ttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactatt 196  Q
    |||||||||||||||||||||| | |||| |||||||||||||  ||||||||| |||||||||||||||||  |||||| |||| || ||||| |||||    
T  14074397 ttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttatgagttccaattttgctatt 14074298  T
Q  197 ccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||||| ||||||||||||||| | |||||||||||||||    
T  14074297 ccctttcgacctgaagtaaagtcctgattttgacaacctt 14074258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 25146761 - 25146542
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccatccattttgattgcgatttt-acaatt 119  Q
    |||| ||||| || ||||||||||||||||| ||| |  |||||||| || | |||| ||| ||||||||||||| ||||||||||||||||| | ||||    
T  25146761 taaactaagttatttatgactatatacaatttataacgtatatttagtatcaatttt-tttgggtaaaatccatcgattttgattgcgatttttagaatt 25146663  T
Q  120 tcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaa 216  Q
    |  | |||| ||||||| ||||   ||||||||| |||||||||||||||||  ||||||||| | |||||||| |||||||||||  ||||||||||||    
T  25146662 ttctatatcgattctacgaaagaccttgagtaaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaacctgaagtaaa 25146563  T
Q  217 gttccgattttgacaaccttg 237  Q
    || | ||||||||||||||||    
T  25146562 gtcctgattttgacaaccttg 25146542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 17869703 - 17869524
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    |||||||| |||||| || |||||||||||| |||| |||||||||||||||||||||||| ||  ||  |||||| ||||||  ||||||||| |||||    
T  17869703 atatttagtattattatt-ttttggtaaaattcatcgattttgattgcgattttacaattttttacattgattctataaaagtccttgagtaaaatcctt 17869605  T
Q  159 cgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     |||||||||||  |||||||| ||||||||||| || |||||||| |||||||| || ||| ||||||||||||| ||||    
T  17869604 tgattttgattgcgattttacgtgtcccgattttgctcttcccttttgacctgaattagagtcccgattttgacaatcttg 17869524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 28 - 237
Target Start/End: Complemental strand, 18304798 - 18304592
Alignment:
Q  28 taagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgt 125  Q
    |||||||| ||||||||||||| ||| ||| |  |||||||| |||| |||| ||||| ||||||||||| ||||||||||||||||||||||||| | |    
T  18304798 taagtcatttatgactatataccattcataacgtatatttagtattaatttt-ttttgataaaatccatcgattttgattgcgattttacaatttcctat 18304700  T
Q  126 atcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccg 222  Q
    ||| |||||||||||||  || ||| ||||||||||||||||| |  |||||||       ||||||| || || ||||| |||||||||| |||| |||    
T  18304699 atcgattctacaaaagtcctttagtaaaatccttcgattttgaatgcgatttta-------cgattttgctttttcctttcgacctgaagtgaagtcccg 18304607  T
Q  223 attttgacaaccttg 237  Q
    |||||||||||||||    
T  18304606 attttgacaaccttg 18304592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 60 - 242
Target Start/End: Original strand, 16434685 - 16434869
Alignment:
Q  60 atatttagcatta-tttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcct 157  Q
    ||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||   ||  ||| |||||||||||||||||| || ||||||| ||||    
T  16434685 atatttatcattaatttttgttttggtagaatccatcgattttgattgcgattttgttat--cttatatcaattctacaaaagttgtcgagtaaaatcct 16434782  T
Q  158 tcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgattga 242  Q
    |||||||||||||  ||||||||| |  ||||||| ||||||||||| |||||  || ||| | | ||||||||||| |||||||||    
T  16434783 tcgattttgattgcaattttacgattttcgattttgctattcccttttgacctagagaaaaatcctgattttgacaatcttgattga 16434869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 47785996 - 47786209
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||||||  | |||||||||||||| ||||| ||| |||||||   ||||    
T  47785996 taaactaagtcatttatgactatataccatttataacatatatttagtattattttt--tgtggtaaaatccatcgatttttatttcgattttgtgattt 47786093  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgat--tgattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||| |  ||||||||||| |  ||||||| || ||| ||||  |||| ||| |||     
T  47786094 cttatatcaattctacaaaagtagttgagtaaaatccttcgattttggttgtgattttacgattgtcgattttgctcttctctttcaacctaaag-aaaa 47786192  T
Q  218 ttccgattttgacaacc 234  Q
    | |||||||||||||||    
T  47786193 tcccgattttgacaacc 47786209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 27917384 - 27917233
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||||||| |||||||| | ||| || ||||||||||||| ||| |||  ||||  || ||||||||| |||||  ||||||| |||| ||    
T  27917384 tgtataagtattttgtg-actttaaactgagttatttatgactatatacgatttataatatatattttgcattatttatgttt--gtaaaattcatcgat 27917288  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    ||||||||||||  ||||||||||| |||||||| ||||||||||||||||||||    
T  27917287 tttgattgcgataatacaatttcttatatcaattatacaaaagtagttgagtaaa 27917233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 42180057 - 42179843
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatattta--gcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| ||||| ||  | ||||| ||| ||||||||||||||||| |||||||||| | |||||||||||    
T  42180057 taaactaagtcatttatgactatataccatttataacatatatatagtattatattttttttggtaaaatccatcgattttgattgtggttttacaattt 42179958  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |       ||||||||||  | || |||| |||||||||||||||||  |||||||||||  ||||| | |||||||||||  ||| ||||||||     
T  42179957 cctat-------ctacaaaagtcctcgaataaaatccttcgattttgattgcgattttacgagtttcgattatgctattcccttttaacccgaagtaaat 42179865  T
Q  218 ttccgattttgacaaccttgat 239  Q
    ||| ||||||||||||||||||    
T  42179864 ttctgattttgacaaccttgat 42179843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 86 - 237
Target Start/End: Complemental strand, 41032701 - 41032547
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtc 182  Q
    |||||||||| ||||| ||||||||||||||||||||| |||| ||||||||||| ||||||||| |||| ||||||||||  ||  |||||||||| |     
T  41032701 aaaatccatcgattttaattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaattcttcgattttagttgcgattttacgatta 41032602  T
Q  183 ccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     | ||||| || ||| ||||  |||||||||||| | || |||||||||||||||    
T  41032601 tcaattttgctcttctctttcaacctgaagtaaaatccctattttgacaaccttg 41032547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 169
Target Start/End: Complemental strand, 13276258 - 13276112
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||| ||||||||||||  ||| ||| |||||  |||| |||||| || |||||||| | |||||| ||||||||||| ||||||||||||    
T  13276258 taaattaagtcatttatgactatatatcatttataacatatatttagtattattatt-ttttggtatagtccatcgattttgattgcaattttacaattt 13276160  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaatccttcgattttgatt 169  Q
    ||| |||| ||||||||||| |  || ||| ||||||||||||||||||    
T  13276159 cttatatcgattctacaaaattccttaagt-aatccttcgattttgatt 13276112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 12002888 - 12002771
Alignment:
Q  1 tgtataagtattttgtggactttaaatt--aagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||||||| ||||  ||||||| ||||||||||| ||||| ||| |||||  ||||||||||||||||||||||| ||||| |      
T  12002888 tgtatatgtattttgtggactttgaattttaagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaatcc-ttg 12002790  T
Q  97 attttgattgcgattttac 115  Q
    |||||||||||||||||||    
T  12002789 attttgattgcgattttac 12002771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 84 - 202
Target Start/End: Complemental strand, 9128768 - 9128647
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgat--tgattttacgag 180  Q
    ||||||| |||  ||||||||||||||||||||||||  | |||| || |||||||| |  || |||||| |||||||||||||||  ||||||||||||    
T  9128768 gtaaaattcataaattttgattgcgattttacaattttctatatcgatcctacaaaaatcctttagtaaaatccttcgattttgatcgtgattttacgag 9128669  T
Q  181 tcccgattttactattcccttt 202  Q
    |||||||||| |||||||||||    
T  9128668 tcccgattttgctattcccttt 9128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 79 - 164
Target Start/End: Original strand, 32881514 - 32881600
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattt 164  Q
    |||| |||||| ||||  ||||||||||||||||||||||||||| |||| |||||||||| |||||||||| ||||||||||||||    
T  32881514 tttttgtaaaagccattgattttgattgcgattttacaatttcttatatcgattctacaaacgtagttgagtaaaatccttcgattt 32881600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 12513418 - 12513626
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttct 122  Q
    |||| |||||||| || |||||||||| ||  ||| ||||||||  ||||| |||  |||||||||||| ||| ||||||||||||||||||||||||||    
T  12513418 taaactaagtcatttacgactatataccatatataacatatttaatattatattt--tttggtaaaatctatcgattttgattgcgattttacaatttct 12513515  T
Q  123 tgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagtt 219  Q
    |        |||||| |||||||||||| |||||||| ||||||| ||  |||||||| | |  ||||||| || ||| |||| ||||||||| ||| |     
T  12513516 t-------atctacagaagtagttgagtaaaatcctttgattttggttgcgattttacaattgtcgattttgctcttctcttttgacctgaagcaaaatc 12513608  T
Q  220 ccgattttgacaaccttg 237  Q
    || |||||||||||||||    
T  12513609 ccaattttgacaaccttg 12513626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 242
Target Start/End: Original strand, 30619156 - 30619300
Alignment:
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg-attttacgagtcccgattttactatt 196  Q
    |||||||||||||||||||||| |  |||| ||||||||||||||||||||| |||||||||||||||  |||   ||||||| |  ||||||| || ||    
T  30619156 tttgattgcgattttacaatttttcatatcgattctacaaaagtagttgagtaaaatccttcgatttttgttgcgatttacgattgtcgattttgctctt 30619255  T
Q  197 ccctttagacctgaagtaaagttccgattttgacaaccttgattga 242  Q
    | |||| ||||||||| ||| | |||||||||||||||||| ||||    
T  30619256 ctctttcgacctgaag-aaaatcccgattttgacaaccttggttga 30619300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18891609 - 18891488
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||||||||| |||||| | | |||| ||||||||| || |||| |||  ||||  ||| ||||||||| ||||||||||||| |||| ||    
T  18891609 tgtataagtattttgtggaatttaaactgaatcatttatgactatctataatttataatatatatttaacattattttcgttttggtaaaattcatcaat 18891510  T
Q  99 tttgattgcgattttacaattt 120  Q
    ||||||||||||| ||| ||||    
T  18891509 tttgattgcgattctacgattt 18891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18337300 - 18337186
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccatt 99  Q
    ||||| ||||||||||||| |||||| || |||||| ||||||||||||||||| ||| |||      ||| |||||||||||||||||||||||| |||    
T  18337300 tgtatgagtattttgtggattttaaacttgagtcatttatgactatatacaatttataacat------catcatttttgttttggtaaaatccatcgatt 18337207  T
Q  100 ttgattgcgattttacaattt 120  Q
    || ||||| ||||||| ||||    
T  18337206 ttaattgcaattttactattt 18337186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 17197413 - 17197306
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||  ||||||||| ||||||||||||  |||  ||||||||||| |||||||| ||| ||||||| ||| ||||||||||| |||||||    
T  17197413 attctacaaaagtccttgagtaaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagtaaagtcccgattt 17197314  T
Q  227 tgacaacc 234  Q
    ||| ||||    
T  17197313 tgataacc 17197306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 153
Target Start/End: Original strand, 18228448 - 18228532
Alignment:
Q  69 attatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    ||||||||  ||||||||| || |||| || |||||||||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  18228448 attattttctttttggtaacattcatcgatgttgattgcgattttacgatttcttatatcgattctacaaaagaagttgagtaaa 18228532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 24117609 - 24117694
Alignment:
Q  1 tgtataagtattttgtggactttaaatta--agtcatatatgactatatacaattaatagcatatttagcattatttttgttttgg 84  Q
    |||||| |||||||||| ||||||||||   |||||| ||||||||||| ||||| | | ||||||||||||||||||||||||||    
T  24117609 tgtatatgtattttgtgaactttaaattttgagtcatttatgactatatgcaatttaaaacatatttagcattatttttgttttgg 24117694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 9954824 - 9954770
Alignment:
Q  183 ccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||| ||||||||||| ||||| ||||||||| ||||||||||||||||||    
T  9954824 ccgattttgctattccctttcgaccttaagtaaagtcccgattttgacaaccttg 9954770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 17197556 - 17197441
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||  ||||||| || || |||||| ||||||||||| |||||  || |||||  ||| ||||||||||||||||||| ||||| || |    
T  17197556 tgtatatgtattttacggactttgaactttagtcatttatgactatatgcaatttgtaacatatatttaacattatttttgttttggtagaatcc-tcga 17197458  T
Q  98 ttttgattgcgatttta 114  Q
    |||||||||||||||||    
T  17197457 ttttgattgcgatttta 17197441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 238
Target Start/End: Complemental strand, 27502217 - 27502128
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
    ||||||||||||||||||||  |||||| ||||| || |||| ||||||  | | ||| ||||||||| | |||||||||||||||||||    
T  27502217 aaatccttcgattttgattgcaattttatgagtctcggttttgctattctatgttgacttgaagtaaattcccgattttgacaaccttga 27502128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 9327166 - 9327109
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatt 119  Q
    |||||||| |||||||||  || |||||||| |||| |||||||||||||||||||||||    
T  9327166 atatttagtattattttt--ttgggtaaaattcatcgattttgattgcgattttacaatt 9327109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 12002748 - 12002638
Alignment:
Q  125 tatcaattctacaaaagtagttgagtaaa-tccttcgattttgattgattttacgagtcccgattttactattccctttagacctgaagtaaagttccga 223  Q
    |||| |||||||||||||   |||||||| |||||||||||| ||||   ||  ||||||| ||||| ||| ||||||| ||| | || |||||| ||||    
T  12002748 tatcgattctacaaaagtctatgagtaaaatccttcgatttttattgtgattttgagtcccaattttgctactccctttcgacttaaattaaagtcccga 12002649  T
Q  224 ttttgacaacc 234  Q
    |||||||||||    
T  12002648 ttttgacaacc 12002638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Original strand, 8773432 - 8773484
Alignment:
Q  61 tatttagcattatttttgttttggtaaaatccatccattttgattgcgatttta 114  Q
    |||||| ||||||||||||||||||| ||||| || ||||| ||||||||||||    
T  8773432 tatttaacattatttttgttttggtagaatcc-tcgatttttattgcgatttta 8773484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 9327246 - 9327209
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  9327246 aaaatccatcgattttgattgcgattttacgatttctt 9327209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 9955066 - 9955029
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  9955066 aaaatccatcgattttgattgcgattttacgatttctt 9955029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 12513379 - 12513416
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  12513379 aaaatccatcgattttgattgcgattttacgatttctt 12513416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 13100289 - 13100326
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  13100289 aaaaaccatcgattttgattgcgattttacaatttctt 13100326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 13276097 - 13276033
Alignment:
Q  170 gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||||||| |||||| |||||| |||| ||||   |||||||| ||||||||||||| ||||    
T  13276097 gattttacgagtcctgattttgctattctctttcgacc---agtaaagtcccgattttgacaatcttg 13276033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 121
Target Start/End: Complemental strand, 17056032 - 17055995
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttc 121  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  17056032 gtaaaatccatcgattttgattgcgattttacgatttc 17055995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 19009977 - 19009940
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  19009977 aaaatccatcgattttgattgcgattttacgatttctt 19009940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 9321597 - 9321550
Alignment:
Q  151 aaatccttcgattttgatt--gattttacgagtcccgattttactatt 196  Q
    |||||||||||||||||||  |||||||||||| |||||||| |||||    
T  9321597 aaatccttcgattttgattgcgattttacgagttccgattttgctatt 9321550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 39845212 - 39845168
Alignment:
Q  70 ttatttttgttttggtaaaatccatccattttgattgcgatttta 114  Q
    ||||||||||||||||| ||| |||| ||||| ||||||||||||    
T  39845212 ttatttttgttttggtataattcatcgattttaattgcgatttta 39845168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 125; Significance: 2e-64; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 3 - 236
Target Start/End: Complemental strand, 25539158 - 25538920
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattt 100  Q
    |||||||||||||||||||||||| | |||||| ||||||||||||||||  ||| |||||  |||||||||||| ||||||||||||||| ||| ||||    
T  25539158 tataagtattttgtggactttaaactgagtcatttatgactatatacaatatataacatatatttagcattatttctgttttggtaaaatctatcgattt 25539059  T
Q  101 tgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattc 197  Q
    ||||||| |||||||||||| || |||| ||||||||||||||||| ||| ||||||||  |||||||||  ||||||||||| ||||||||| ||||||    
T  25539058 tgattgcaattttacaattttttatatcgattctacaaaagtagttcagtaaaatcctttaattttgattgcgattttacgagacccgatttttctattc 25538959  T
Q  198 cctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||| ||||||| ||||||| |||||||||||||||||    
T  25538958 cctttcgacctgatgtaaagtaccgattttgacaacctt 25538920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 19262251 - 19262090
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--atttt 175  Q
    |||||||||| ||| || ||||||||||||||||||||||||||| |||| |||||||||||||  ||||||||| || ||||||||||||||  |||||    
T  19262251 ttttggtaaagtccgtcgattttgattgcgattttacaatttcttatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgatttt 19262152  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||||||| |||||||| || ||| ||||||||||||||||||| ||||||||||    
T  19262151 acgagtcccgattttgctattcccattcgacttgaagtaaagttccgatttcgacaaccttg 19262090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 20063917 - 20064078
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gatttt 175  Q
    ||||||||||||||||| |||||| |||||||||||||||||| | |||| |||||||||||||  |||||| |||| ||||||||||||||  ||||||    
T  20063917 ttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgatttt 20064016  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||    
T  20064017 acgagtctcgattttgctattccctttcaacctgaagtaaagccccgattttgacaaccttg 20064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 31237911 - 31237750
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--atttt 175  Q
    ||||||||||||||||| ||||||||||| ||||||||||||  | |||| ||| |||||||||  ||||||||| ||||||||| |||||||  |||||    
T  31237911 ttttggtaaaatccatcgattttgattgcaattttacaattttctatatcgattttacaaaagtccttgagtaaaatccttcgatattgattgcgatttt 31237812  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||||||||||||||||||| || |||||||||||| | ||||||||||| ||||    
T  31237811 acgagtcccgattttactattcccttttgaactgaagtaaagtcctgattttgacaatcttg 31237750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 5 - 170
Target Start/End: Original strand, 16766904 - 16767071
Alignment:
Q  5 taagtattttgtggactttaaattaagtcatatatgactatatacaattaatagca--tatttagcattatttttgttttggtaaaatccatccattttg 102  Q
    ||||| |||||||||||||||| | |||||| ||||||| ||||||||| ||| ||  |||||||||||||||||||||||||||| ||| |  ||||||    
T  16766904 taagttttttgtggactttaaactgagtcatttatgactgtatacaatttataacaaatatttagcattatttttgttttggtaaa-tcctttgattttg 16767002  T
Q  103 attgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||||||| ||||||| |||| |||||| |||||||||||||| ||||||||| ||||||||||    
T  16767003 attgcgattttacgatttcttatatcgattctataaaagtagttgagtaaaatccttcaattttgattg 16767071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 30433013 - 30433169
Alignment:
Q  83 ggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacga 179  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||| |||||| ||||||  |||||| ||||| |||||||||||||  ||||||| ||    
T  30433013 ggtaaaatccatctattttgattgcgattttacaatttcctatatcgattctataaaagtccttgagtaaaatcattcgattttgattgcgattttatga 30433112  T
Q  180 gtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||||| ||||| | ||| |||||||||||| || |||||||||||||||||    
T  30433113 gtcccgatttttctattgcttttcgacctgaagtaatgtcccgattttgacaacctt 30433169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 87 - 236
Target Start/End: Original strand, 1404985 - 1405137
Alignment:
Q  87 aaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcc 183  Q
    ||||||||| ||||||||||| ||||||||||||| | |||| |||||||||||||  |||||| |||||||||||||||||||  ||||||| |||| |    
T  1404985 aaatccatcgattttgattgcaattttacaatttcctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattttatgagtac 1405084  T
Q  184 cgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||| ||||||||||| ||||| || ||||||  ||||||||||||||||    
T  1405085 cgattttgctattcccttttgacctaaattaaagtctcgattttgacaacctt 1405137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 27406905 - 27407077
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaata--gcatatttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||| ||||||||||||||||||| | |||||| ||| |||||||||| || |||    |||||||||||||||||||||||||| ||||||||| ||    
T  27406905 tgtatatgtattttgtggactttaaactgagtcatttattactatatacagtttataatatatatttagcattatttttgttttggtgaaatccatcaat 27407004  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||||||||||  ||||||| |||  ||| | ||||||||||||||| |||| ||| |||||||||||    
T  27407005 tttgattgcgattttatgatttcttatattgattatccaaaagtagttgagtaaaattcttggattttgattg 27407077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 13502627 - 13502446
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaa-atcctt 158  Q
    |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||  ||||||||||| ||||||| ||| ||||||    
T  13502627 atatttaatattatttttgttttggtaaaatccatcgattttgattgcgattttacgatttcttatatagattctacaaaaatagttgactaatatcctt 13502528  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
    | |||||||||  |||||||||| |  |||||||||| ||||||||  || ||||  ||| || | |||||||||||||||||    
T  13502527 caattttgattacgattttacgattttcgattttactcttccctttccacttgaaacaaaatt-caattttgacaaccttgat 13502446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 153
Target Start/End: Complemental strand, 5395532 - 5395384
Alignment:
Q  6 aagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatattt--agcattatttttgttttggtaaaatccatccattttga 103  Q
    |||||||| ||||||||||||||  ||||| ||||||||||||||||| ||| |||||||  | ||||||||||||||||||||||||  || |||||||    
T  5395532 aagtatttggtggactttaaattgggtcatttatgactatatacaatttataacatattttgaacattatttttgttttggtaaaatctttcgattttga 5395433  T
Q  104 ttgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    |||  ||||||  ||||||| |||| |||||| ||||||| |||||||||    
T  5395432 ttgtaattttaagatttcttatatcgattcta-aaaagtaattgagtaaa 5395384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 974438 - 974694
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||||||| ||  ||||||||| ||||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| ||     
T  974438 tgtatatgtattttgtggactttgaactttaagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcg 974536  T
Q  97 attttgattgcgattttacaa-------------tttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgag 180  Q
    ||||||||||||||||||| |             | || | |||| |||||||||||||  |||||| |||||||||||||||||||  |||||||||||    
T  974537 attttgattgcgattttacgagtcccgacttcgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgag 974636  T
Q  181 -tcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     | |||||||| ||| ||||||| ||| ||||||||||| ||||| |||| |||||||    
T  974637 tttccgattttgctactccctttcgacttgaagtaaagtcccgatattgataaccttg 974694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 21869350 - 21869095
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||||||| ||  |||||| || ||||||||||| ||||| ||| |||||  ||||||| ||||||||||||||| |||| |||     
T  21869350 tgtatatgtattttgtggactttgaactttaagttatttatgactatatgcaatttataacatatatttagcataatttttgttttggtagaatc-atcg 21869252  T
Q  97 attttgattgcgattttacaatt-------------tcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgag 180  Q
    |||||||||| |||||||| | |             || | |||| |||||||||||||  |||| |||| |||||||||||| ||||  |||||| |||    
T  21869251 attttgattgggattttacgagtctcgattttgctatcatatatcgattctacaaaagtcattgaataaaatccttcgattttaattgcgattttaagag 21869152  T
Q  181 tcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||| ||||||||||| ||| ||||||||||| ||||||||||| ||||||    
T  21869151 tcccgatttttctattccctttcgacttgaagtaaagtcccgattttgacgaccttg 21869095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 37 - 236
Target Start/End: Original strand, 8428372 - 8428576
Alignment:
Q  37 tatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattct 134  Q
    |||||||||||| |||| |||  ||||  ||||||||||||||||||||||| ||| |||| ||||  ||||||||||||| |||| |  |||  |||||    
T  8428372 tatgactatatataatttataatatatagttagcattatttttgttttggtataattcatcgatttgtattgcgattttacgatttttgatattgattct 8428471  T
Q  135 acaaaagtagttgag-taaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgaca 231  Q
    |||||| ||||||||  |||||||||||||||||||  |||||||  | |   |||||| ||||||||||| ||||| ||| ||| | ||||||||||||    
T  8428472 acaaaaatagttgagcaaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgacctaaagcaaaatcccgattttgaca 8428571  T
Q  232 acctt 236  Q
    |||||    
T  8428572 acctt 8428576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 35565940 - 35565819
Alignment:
Q  29 aagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgta 126  Q
    ||||||| ||||||||||||||||| ||| |||||  ||||   ||||||| ||||||||||||||||| |||||||||| |||||||  ||||||| ||    
T  35565940 aagtcatttatgactatatacaatttataacatatatttag---tattttt-ttttggtaaaatccatcgattttgattgtgattttatgatttcttata 35565845  T
Q  127 tcaattctacaaaagtagttgagtaa 152  Q
    || |||||||||||||||||||||||    
T  35565844 tcgattctacaaaagtagttgagtaa 35565819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 237
Target Start/End: Original strand, 7301895 - 7302137
Alignment:
Q  8 gtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgat 104  Q
    |||||||||||||||| || || |||||| |||||| |||| ||||| ||| |||||  ||| |||||||||| |||||||| ||||| || ||||||||    
T  7301895 gtattttgtggactttgaactttagtcatttatgaccatatgcaatttataacatatatttaacattatttttattttggtagaatcc-tcgattttgat 7301993  T
Q  105 tgcgattttacaa--------tttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttact 193  Q
    ||||||||| | |        |||  |  ||| |||||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||||||| ||    
T  7301994 tgcgattttgcgagtcccgactttgctacatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgct 7302093  T
Q  194 attccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |  ||| ||  || ||||||||||| |||||||||| |||||||    
T  7302094 accccccttcaacttgaagtaaagtcccgattttgataaccttg 7302137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 27523980 - 27523881
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||||||| ||| ||||||||||| |||||||    
T  27523980 attctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaagtcccgattt 27523881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 212
Target Start/End: Complemental strand, 15588842 - 15588654
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttct 122  Q
    |||| |||||||| ||||| ||||||| ||| ||   |||||||| |||||||||   ||||||||||||||| |||||||||||||||||| |||||||    
T  15588842 taaactaagtcatttatgattatataccatttatcatatatttagtattattttt---ttggtaaaatccatcgattttgattgcgattttataatttct 15588746  T
Q  123 tgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaag 212  Q
    | |||| || ||||  ||||| |||||| |||||||||||||||| ||  ||||||| || |  ||||||| || ||| |||| |||||||||    
T  15588745 tatatcgatcctac-gaagtaattgagtaaaatccttcgattttggttgcgattttatgattgtcgatttttcttttctctttcgacctgaag 15588654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19492046 - 19492168
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagc--atatttagcattatt-tttgttttggtaaaatccatcca 97  Q
    |||||||||||| |||||||||||||   ||| || ||||||||||||||||| ||| |  ||||||||||||||| ||| ||||||||||||||||| |    
T  19492046 tgtataagtattctgtggactttaaacagagttatttatgactatatacaatttataacatatatttagcattattattttttttggtaaaatccatcga 19492145  T
Q  98 ttttgattgcgattttacaattt 120  Q
    |||||||| || |||||| ||||    
T  19492146 ttttgattacggttttacgattt 19492168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 19245702 - 19245944
Alignment:
Q  6 aagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccatttt 101  Q
    |||||||||||||||||||||  || |||||| |||||||| || |||||  || |||||  ||| |||||||||| |||||||| |||||||| ||||     
T  19245702 aagtattttgtggactttaaactttgagtcatttatgactacatgcaatttctatcatatatttaacattatttttattttggtagaatccatcgattt- 19245800  T
Q  102 gattgcgattttacaattt-----cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttact 193  Q
    |||| |||||||  | |||     | | |||| ||||||||||||||||| |||||| ||||| |||||||||||  ||||||||| |   |||||| ||    
T  19245801 gattacgattttcgattttactatcctatatcgattctacaaaagtagttaagtaaaatccttagattttgattgcgattttacgatttttgattttgct 19245900  T
Q  194 attccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||  || ||||| ||| | ||||||||||||||||||    
T  19245901 attccctttcaacttgaagcaaaatcccgattttgacaaccttg 19245944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 41002126 - 41002242
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||||||||||| || || |||||| ||||||||||| ||||| ||| |||||  ||||||||||||||||||||||| ||||| || |    
T  41002126 tgtatatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaatcc-tcga 41002224  T
Q  98 ttttgattgcgattttac 115  Q
    |||||||| |||||||||    
T  41002225 ttttgattacgattttac 41002242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 34841705 - 34841816
Alignment:
Q  11 ttttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcg 108  Q
    |||||||||||||||| | ||| || ||||||||||||||||| ||| |||||  |||  ||||||||||||| | || |||||||| ||||||||||||    
T  34841705 ttttgtggactttaaactgagttatttatgactatatacaatttataacatatatttattattatttttgtttggatagaatccatcgattttgattgcg 34841804  T
Q  109 attttacaattt 120  Q
    ||||||| ||||    
T  34841805 attttacgattt 34841816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 229
Target Start/End: Complemental strand, 20034106 - 20034004
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||  ||||||||| |||||| ||||||||||  |||||||||||| ||||||| ||| ||||||| ||| ||||||||||| |||||||    
T  20034106 attctacaaaagtccttgagtaaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcgacttgaagtaaagtcccgattt 20034007  T
Q  227 tga 229  Q
    |||    
T  20034006 tga 20034004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 60 - 190
Target Start/End: Original strand, 36430024 - 36430156
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaa-atcctt 158  Q
    |||||||| ||| ||||| ||| ||||||||||||| ||||||||||| ||||||   ||| || |||| ||||||||||| |  |||||||| ||||||    
T  36430024 atatttagtatttttttt-tttaggtaaaatccatcgattttgattgcaattttaattttttttttatcgattctacaaaaattattgagtaatatcctt 36430122  T
Q  159 cgattttgatt--gattttacgagtcccgatttt 190  Q
    |||||||||||  ||||||||||||||| |||||    
T  36430123 cgattttgattgcgattttacgagtcccaatttt 36430156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 24473933 - 24474056
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcat--atttagcattatttttgttttggtaaaatccatcc 96  Q
    ||||||||||||||||||| ||| ||  || |||||| ||| ||||||| ||||| ||| |||  ||||| ||||| ||||||||||||| |||||| |     
T  24473933 tgtataagtattttgtggaattttaacttttagtcatttataactatatgcaatttatatcatctatttatcattaattttgttttggtagaatccaacg 24474032  T
Q  97 attttgattgcgattttacaattt 120  Q
    ||||| |||| |||||||||||||    
T  24474033 attttaattgtgattttacaattt 24474056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 31023417 - 31023531
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||| |||||||| ||| ||| |  | ||||||||| ||| ||| ||| |||||  ||| |||||||||| ||||||||||||||||| ||    
T  31023417 tgtataagtatttggtggactt-aaactaattagtttatgactatttactatttataacatatatttaacattatttttattttggtaaaatccatcgat 31023515  T
Q  99 tttgattgcgatttta 114  Q
    ||||||| ||||||||    
T  31023516 tttgattacgatttta 31023531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 20034243 - 20034134
Alignment:
Q  8 gtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgat 104  Q
    |||||||||||| ||| || || |||||| ||||| ||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || ||||||||    
T  20034243 gtattttgtggattttgaactttagtcatttatgagtatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgat 20034145  T
Q  105 tgcgattttac 115  Q
    |||||||||||    
T  20034144 tgcgattttac 20034134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 34577992 - 34578106
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||||||||||| || || |||||| |||||||||   ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || |    
T  34577992 tgtatatgtattttgtggactttgaactttagtcatttatgactatg--caatttataacatatatttaacattatttttgttttggtagaatcc-tcga 34578088  T
Q  98 ttttgattgcgattttac 115  Q
    ||||||||||||||||||    
T  34578089 ttttgattgcgattttac 34578106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 79 - 166
Target Start/End: Complemental strand, 1690663 - 1690575
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttg 166  Q
    ||||||||||||  ||| ||||||||||||||||||| | ||||| |||| |||  |||||||||||| |||||| ||||||| |||||    
T  1690663 ttttggtaaaatttatcgattttgattgcgattttacgaattcttatatcgatttaacaaaagtagttcagtaaattccttcgcttttg 1690575  T

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Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 19519549 - 19519609
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||||||| ||||| ||| |||| ||| ||||||||||||||||||| ||||    
T  19519549 atatttagcattattttggtttttgtagaatctatcaattttgattgcgattttacgattt 19519609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Original strand, 26251628 - 26251746
Alignment:
Q  3 tataagtattttgtggactttaaa---ttaagtcatatatgactatatacaattaatagc--atatttagcattatttttg-ttttggtaaaatccatcc 96  Q
    |||| ||||||||||||||| |||   || |||||| ||||||||||| ||||| ||| |  ||||||| ||||||||||| |||||||| |||| | |     
T  26251628 tataggtattttgtggacttgaaacttttgagtcatttatgactatatgcaatttataacatatatttaccattatttttgattttggtagaatctaccg 26251727  T
Q  97 attttgattgcgattttac 115  Q
    ||||||||||| |||||||    
T  26251728 attttgattgcaattttac 26251746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Original strand, 31578141 - 31578238
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||||||  || | ||||||||||| ||| | ||||||||||||||||||    
T  31578141 taaactaagtcatttatgactatataccatttataacatatatttagtattattttt--ttggttaaaatccatcgattataattgcgattttacaattt 31578238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 31238008 - 31237971
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  31238008 aaaatccatcgattttgattgcgattttacgatttctt 31237971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 115
Target Start/End: Complemental strand, 27524122 - 27524008
Alignment:
Q  3 tataagtattttgtggacttt-aaattaagtcatatatgactatatacaattaata--gcatatttagcattatttttgttttggtaaaatccatccatt 99  Q
    |||| |||||||||||||||| || || | |||| ||||| ||||| ||||| |||    ||||||| ||||||||||||||||||| || || || |||    
T  27524122 tatatgtattttgtggactttgaactttaatcatttatgaatatatgcaatttataatatatatttaacattatttttgttttggtagaa-ccctcgatt 27524024  T
Q  100 ttgattgcgattttac 115  Q
    |||||||| |||||||    
T  27524023 ttgattgcaattttac 27524008  T

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Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 202
Target Start/End: Original strand, 34578134 - 34578209
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattcccttt 202  Q
    |||||||||||||   |||||||| |||||| ||||||||||  |||||| ||||||||||||| ||| |||||||    
T  34578134 attctacaaaagtccatgagtaaaatccttcaattttgattgcgattttatgagtcccgattttgctactcccttt 34578209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 8011151 - 8010946
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||||||||||||||||||||||| ||| |||| ||| | ||||||||||| ||| |||||  ||||||||||||||||||||||||||| |||| ||    
T  8011151 tgtataagtattttgtggactttaaactaattcatttataattatatacaatttataacatatatttagcattatttttgttttggtaaaatacatcgat 8011052  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactat 195  Q
    ||||||||||||||||||||||||| |||| |||||| |||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  8011051 tttgattgcgattttacaatttcttatatcgattctataaaaatagttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctat 8010952  T
Q  196 tccctt 201  Q
    ||||||    
T  8010951 tccctt 8010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 3 - 237
Target Start/End: Complemental strand, 6346968 - 6346729
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattt 100  Q
    ||||| |||||| | ||||||||  | |||||| ||||  ||||||||||| ||| |||||  ||| |||||||||||||||||| ||||||||| ||||    
T  6346968 tataactattttctagactttaacctgagtcatttatgcatatatacaatttataacatatatttatcattatttttgttttggtgaaatccatcgattt 6346869  T
Q  101 tgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgat--tgattttacgagtcccgattttactattc 197  Q
    ||||||||||||||||||||||| |||  ||||||||||||||||||||| ||||||||||||||||||  ||||||||||| |  ||||||| || |||    
T  6346868 tgattgcgattttacaatttcttatattcattctacaaaagtagttgagtaaaatccttcgattttgattgtgattttacgattttcgattttgctcttc 6346769  T
Q  198 cctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||| ||||||||| ||| ||||||||||||||||||||    
T  6346768 cctttcgacctgaagcaaatttccgattttgacaaccttg 6346729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 37 - 238
Target Start/End: Original strand, 9770263 - 9770468
Alignment:
Q  37 tatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattct 134  Q
    ||||||||||||| ||| ||| |||||  |||| |||| |||| ||| |||||||| |||| ||||||||||||||||||||||||  | |||| |||||    
T  9770263 tatgactatataccattcataacatatatttagtattaatttt-tttgggtaaaattcatcgattttgattgcgattttacaatttgctatatcgattct 9770361  T
Q  135 acaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgaca 231  Q
    |||||||   ||||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||| ||||||||| ||||||||||||    
T  9770362 acaaaagaccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgacctaaagtaaagtcccgattttgaca 9770461  T
Q  232 accttga 238  Q
    |||||||    
T  9770462 accttga 9770468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 5375840 - 5376020
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    |||||||| |||| |||| ||| ||||||||||||| |||||||||| |||||||||||||| | |||  |||||||| ||||  ||||||||| |||||    
T  5375840 atatttagtattaattttttttgggtaaaatccatcgattttgattgtgattttacaatttcctatatagattctacagaagtccttgagtaaaatcctt 5375939  T
Q  159 cgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||||  ||||||||||||||||||||||||||   ||| ||||||||||||||| || |||||||||||||||    
T  5375940 cgattttgattgcgattttacgagtcccgattttactatttatttttgacctgaagtaaagtcccaattttgacaaccttg 5376020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 9911403 - 9911186
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatattt--agcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| ||||| |  || |||||| || |||||||||| |||||| ||||||||||||||||||||||||    
T  9911403 taaactaagtcatttatgactatataccatttataacatatattaagtattattatt-ttttggtaaagtccatcgattttgattgcgattttacaattt 9911305  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||| |||||||||||||  | |||| |||||||||| |||| |||  ||||||||||||||||||||||||||||||||| ||  ||||||||||    
T  9911304 cttatatcgattctacaaaagttctcgagtaaaatccttcgttttttattgcgattttacgagtcccgattttactattccctttcgatatgaagtaaag 9911205  T
Q  218 ttccgattttgacaacctt 236  Q
    | |  ||||||||| ||||    
T  9911204 tcctaattttgacaccctt 9911186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 28 - 236
Target Start/End: Original strand, 36120966 - 36121177
Alignment:
Q  28 taagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgt 125  Q
    |||||||| ||||||||||||| ||| |||  ||||  |||| |||||| ||  |||||||||||||||| ||||||||||||||||||||||||| | |    
T  36120966 taagtcatttatgactatataccatttataaaatatatttagtattattatt--tttggtaaaatccatcgattttgattgcgattttacaatttcctat 36121063  T
Q  126 atcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccg 222  Q
    ||| || ||||||||||  |||||| ||||| |||||||||||||  |||||||||||||||||||   |||||||||||  || ||||||||||  |||    
T  36121064 atcgatactacaaaagtccttgagtaaaatctttcgattttgattccgattttacgagtcccgattaagctattccctttcaacttgaagtaaagacccg 36121163  T
Q  223 attttgacaacctt 236  Q
    ||||||||||||||    
T  36121164 attttgacaacctt 36121177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 9149738 - 9149565
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||||||||||| ||||||||||  | |||||| ||| ||||||||||||| ||| |||||  |||||||||||||| ||||||||||||| ||| ||    
T  9149738 tgtataagtattttttggactttaagctgagtcatttataactatatacaatttataacatatatttagcattatttttcttttggtaaaatctatcaat 9149639  T
Q  99 tttgattgcg-attttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||||  |||||| ||||||| |||| ||||||| ||||||||||||| ||||||||| ||||||||||    
T  9149638 tttgattgcgttttttacgatttcttatatcgattctacgaaagtagttgagtaaaatccttcaattttgattg 9149565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 60 - 235
Target Start/End: Complemental strand, 23064914 - 23064737
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    |||||||| |||||| || |||||||||||||  || ||||||||||| ||||||||||||| | |||| |||||||||||||  |||| |||| |||||    
T  23064914 atatttagtattattatt-ttttggtaaaatcattcgattttgattgcaattttacaatttcctatatcgattctacaaaagtccttgaataaaatcctt 23064816  T
Q  159 cgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacct 235  Q
    | ||||||||||  ||||||||||| |||||||   |||||||||| ||||||||||||||| ||||||||||||||||    
T  23064815 caattttgattgcgattttacgagttccgatttcgttattccctttcgacctgaagtaaagtcccgattttgacaacct 23064737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 7044877 - 7045049
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||| |||| ||||||||| | |||||| ||| ||||||||||| | ||| || ||  ||| |||||||||||||||||||||||||||| ||    
T  7044877 tgtataagtatcttgtcgactttaaactgagtcatttatcactatatacaaattataacacatgtttaacattatttttgttttggtaaaatccatcgat 7044976  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||  ||||||| ||||||| |||| ||| | ||||||||||||||| ||||| ||||||||||||||    
T  7044977 tttgattgatattttacgatttcttatatcgattattcaaaagtagttgagtaaaatcattcgattttgattg 7045049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 7045058 - 7045299
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattt 100  Q
    ||||||||| || | ||||||||| | |||||| ||| ||||||||||| | ||| |||||  ||| |||||||||||||||||||| ||||||  ||||    
T  7045058 tataagtatcttatcgactttaaactgagtcatttatcactatatacaaattataacatatatttaacattatttttgttttggtaagatccatagattt 7045157  T
Q  101 tgattgcgattttacaatttcttgta--tcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactat 195  Q
    ||||||  ||||||| ||||||| ||  || |||||  ||||| |||||||| |||||||||||||||||||  ||||||| || |   |||||| || |    
T  7045158 tgattgatattttacgatttcttatatctcgattcttgaaaagcagttgagtaaaatccttcgattttgattgcgattttatgatttttgattttgctct 7045257  T
Q  196 tccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||| ||||||||||||| |||| |||||||||||||||    
T  7045258 tccctttcgacctgaagtaaaattcctattttgacaaccttg 7045299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 55476089 - 55476345
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||||| ||||| || || |||||| ||||||||||| ||||| ||| |||||  || |||||||||||||||||||| ||||| || |    
T  55476089 tgtatatgtattttgtgtactttgaactttagtcatttatgactatatgcaatttataacatatattttgcattatttttgttttggtagaatcc-tcga 55476187  T
Q  98 ttttgattgcgattttacaatttc-------------ttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagt 181  Q
    |||||||||||||||||| | |||             || |||| |||||||||||||  ||||||||| |||||||||||||||||  |||||||||||    
T  55476188 ttttgattgcgattttacgagttccgactttgctatcttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagt 55476287  T
Q  182 cccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
     ||||||||| || ||||||| ||| ||||||||||| |||||||||| |||||||||    
T  55476288 accgattttattactccctttcgacttgaagtaaagtcccgattttgataaccttgat 55476345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 10143036 - 10143186
Alignment:
Q  23 taaattaagtcatatatgactatatac-aatta--atagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatt 119  Q
    ||||| ||||||| ||||||||||||| |||||  |||  |||||||| ||||||||| ||||| ||||||||||| ||||||||||||||||||||||     
T  10143036 taaatcaagtcatttatgactatataccaattataatat-atatttagtattattttttttttgataaaatccatcaattttgattgcgattttacaatc 10143134  T
Q  120 tcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    |||| |||| ||||||||||| ||||||| | ||||||||||||||||||||    
T  10143135 tcttatatcgattctacaaaattagttgaataaaatccttcgattttgattg 10143186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 24719725 - 24719926
Alignment:
Q  37 tatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattct 134  Q
    ||||||||||||||||| ||| |||||  ||| ||||||||||| ||||||||||  |||| ||||||||||||||||||| ||||||| |||| |||||    
T  24719725 tatgactatatacaatttataacatatatttaacattatttttgctttggtaaaactcatcgattttgattgcgattttacgatttcttatatcgattct 24719824  T
Q  135 acaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgaca 231  Q
    ||||||||| | |||| ||||||||||||| |||||  ||||||        ||||||| || |||||||| ||||||||| ||| |  |||||||||||    
T  24719825 acaaaagtaatcgagtaaaatccttcgattgtgatttcgatttt-------tcgattttgctcttccctttcgacctgaagcaaaatctcgattttgaca 24719917  T
Q  232 accttgatt 240  Q
    |||||||||    
T  24719918 accttgatt 24719926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 7452624 - 7452861
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatattt--agcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||| ||||||||| |||||| | |||||| |    ||||||| |||| ||| ||||| |  ||||||||||||||||||  |||||||||| ||    
T  7452624 tgtataagtgttttgtggaatttaaactgagtcattt----ctatatagaatttataacatatattaagcattatttttgttttgacaaaatccatcgat 7452719  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaatccttcgattttgatt--gattttacgagtcccgattttactatt 196  Q
    |||  ||| | |||||| ||||| | |||  ||||||||||||||||||||||||||||||||||||||||  |||||||||| |  | | ||| || ||    
T  7452720 tttagttgtgcttttacgatttcgtatattgattctacaaaagtagttgagtaaatccttcgattttgattgcgattttacgattttcaacttttctctt 7452819  T
Q  197 ccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
    |||||| ||||||||| ||| | |  ||||||||||||||||    
T  7452820 ccctttcgacctgaagcaaaatcctaattttgacaaccttga 7452861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 4156967 - 4157094
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatattt--agcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||||||| ||||||||   | |||| ||| |||||||||||||| || ||||| |  | ||||||||||||||| |||||||||||| ||    
T  4156967 tgtataagtattttgtgaactttaaaccgaatcatttatcactatatacaatta-taacatatattcaacattatttttgttttagtaaaatccatcgat 4157065  T
Q  99 tttgattgcgattttacaatttcttgtat 127  Q
    ||||||||||||||||| |||||||||||    
T  4157066 tttgattgcgattttacgatttcttgtat 4157094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 10394786 - 10394965
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    ||||||| |||||||||||||||||||| ||||||| | ||||||||  ||||||| ||||| | || | |||||||||||||||||||||||| |||||    
T  10394786 atatttaccattatttttgttttggtaatatccatcga-tttgattgtaattttacgatttcctataccgattctacaaaagtagttgagtaaagtcctt 10394884  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||||  |||||||||| |   |||||| || || | |||  || ||||| ||| |||| |||||||||||||||    
T  10394885 cgattttgattgcgattttacgatttttgattttgctctttcttttcaacttgaagcaaaattccaattttgacaaccttg 10394965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 17466216 - 17466345
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||  ||||||||| | ||| ||||||||||| ||||||||||| ||||||||||||    
T  17466216 taaactaagtcatttatgactatataccatttataacatatatttaatattatttttttgttg-taaaatccatcgattttgattgcaattttacaattt 17466314  T
Q  121 cttgtatcaattctacaaaagtagttgagta 151  Q
    ||| |||| |||| |||||||||||||||||    
T  17466315 cttatatcgattccacaaaagtagttgagta 17466345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 5361908 - 5361760
Alignment:
Q  71 tatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt 169  Q
    ||||||| ||||||| ||||||||| | ||||||||||||||||| ||||| | |||| ||||||||||||||||||||| ||| |||||||||||| ||    
T  5361908 tatttttcttttggtcaaatccatcgactttgattgcgattttacgatttcatatatcgattctacaaaagtagttgagtaaaacccttcgattttgttt 5361809  T
Q  170 g--attttacgagtcccgattttactattccctttagacctgaagtaaa 216  Q
    |  ||||||||| |  | ||||| || ||| |||| |||||||| ||||    
T  5361808 gcaattttacgattgtctattttgctcttctctttcgacctgaaataaa 5361760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 18459631 - 18459405
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||| || ||| |||||  ||||| ||| ||||||||||| |||  ||||| ||    
T  18459631 tgtataagtattttgtggactttaaaccgagtcatttatgactatatacagttcataacatatatttagcgttacttttgttttggcaaag-ccatcgat 18459533  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactat 195  Q
    |||||||              |||| |||||||||||||||| ||||| ||| ||||||||||||||| |||  |||||||||| |  ||||||| || |    
T  18459532 tttgatt--------------tcttatatcaattctacaaaattagttaagtcaaatccttcgattttaattgcgattttacgattgtcgattttgctct 18459447  T
Q  196 tccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    | |||||  |||||||| ||| |  |||||||||||||||||    
T  18459446 ttcctttcaacctgaagcaaaatctcgattttgacaaccttg 18459405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 236
Target Start/End: Original strand, 37240450 - 37240593
Alignment:
Q  97 attttgattgcgattttacaatttcttg-tatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttac 192  Q
    |||||||||| |||||||| |||||||  |||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |  ||||||  |    
T  37240450 attttgattgtgattttacgatttctttatatcgattctacaaaagtagttgagtaaaatccttcgattttgattgcgattttacgattgtcgatttagc 37240549  T
Q  193 tattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    | ||| |||| | ||||||| |||  ||  ||||||||||||||    
T  37240550 tcttctctttcgtcctgaagcaaaactctaattttgacaacctt 37240593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 71 - 237
Target Start/End: Original strand, 8889412 - 8889571
Alignment:
Q  71 tatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaa-atccttcgattttgatt 169  Q
    ||||||| | |||||||||| |||| ||||||||||||||||||||||||         ||||||||||||||||||||||| |||||||||||||| ||    
T  8889412 tatttttttgttggtaaaattcatcgattttgattgcgattttacaattt---------attctacaaaagtagttgagtaagatccttcgattttggtt 8889502  T
Q  170 --gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
      |||||||| | |  | ||||| ||  || |||| ||||||||| ||| | ||||||||||||||||||    
T  8889503 gcgattttacaattgtcaattttgct-ctctctttcgacctgaagcaaaatcccgattttgacaaccttg 8889571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 18403650 - 18403757
Alignment:
Q  9 tattttgtggactttaaatta-agtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgatt 105  Q
    ||||||||||||||| ||||  ||||||  |||||||||||||||| ||| |||||  ||| ||||||||||||||||||| ||| | || |||||||||    
T  18403650 tattttgtggactttgaatttgagtcattcatgactatatacaatttataacatatatttaacattatttttgttttggtagaat-cttcgattttgatt 18403748  T
Q  106 gcgatttta 114  Q
    |||||||||    
T  18403749 gcgatttta 18403757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7803210 - 7803262
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaatt 53  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  7803210 tgtataagtattttgtggactttaaactgagtcatttatgactatatacaatt 7803262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7825164 - 7825216
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaatt 53  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||||||    
T  7825164 tgtataagtattttgtggactttaaactgagtcatttatgactatatacaatt 7825216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 5884277 - 5884193
Alignment:
Q  32 tcatatatgactatatacaattaatagcata--tttagcattatttttgttttggtaaaatccatccattttgattgcgatttta 114  Q
    |||| |||||| |||| ||||| ||| ||||  |||||||||| ||||||||| |||||||||||| |||||||||| |||||||    
T  5884277 tcatttatgacaatatgcaatttataacatacttttagcattacttttgtttttgtaaaatccatctattttgattgtgatttta 5884193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 7815761 - 7815813
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaatt 53  Q
    |||||||||||| ||||||||||||| | |||||| |||||||||||||||||    
T  7815761 tgtataagtattatgtggactttaaactgagtcatttatgactatatacaatt 7815813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 8409725 - 8409810
Alignment:
Q  30 agtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgatttta 114  Q
    |||||| |||||||||||  |||| ||| |||||  ||||||||||||||||||||||| ||||| || ||||||||| ||||||||    
T  8409725 agtcatttatgactatatgtaatttataacatatatttagcattatttttgttttggtagaatcc-tcgattttgattacgatttta 8409810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 13551589 - 13551448
Alignment:
Q  97 attttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttact 193  Q
    |||||||||| ||||||| |||||  |  ||| |||||| ||||||  | ||||||| |||||||||||| ||||  ||||||||||||  |||||| ||    
T  13551589 attttgattgtgattttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgct 13551490  T
Q  194 attccctttagacctgaagtaaagttccgattttgacaacct 235  Q
    ||||| ||| |||| |||||||||| | ||| || |||||||    
T  13551489 attccttttcgaccagaagtaaagtccggatctttacaacct 13551448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 101
Target Start/End: Complemental strand, 5943259 - 5943160
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcat---atttagcattatttttgttttggtaaaatccatccatt 99  Q
    ||||||||||||||| |||||||| |  ||||| |||||||||| |  ||| ||| |||   ||||| |||||||||| ||||||||||||||||| |||    
T  5943259 tataagtattttgtgcactttaaactttgtcatttatgactataaa--atttataacattatatttaacattatttttattttggtaaaatccatcgatt 5943162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 190
Target Start/End: Original strand, 8367469 - 8367510
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgatttt 190  Q
    ||||||||||||||||||||  ||||||||||||||||||||    
T  8367469 aaatccttcgattttgattgcaattttacgagtcccgatttt 8367510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Complemental strand, 9911447 - 9911405
Alignment:
Q  81 ttggtaaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||| |||||||||| ||||||||||||||||||| |||||||    
T  9911447 ttggcaaaatccatcgattttgattgcgattttacgatttctt 9911405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 169 - 227
Target Start/End: Original strand, 13023845 - 13023903
Alignment:
Q  169 tgattttacgagtcccgattttactattccctttagacctgaagtaaagttccgatttt 227  Q
    ||||||||||||| |||||||| |||||| |||| ||| ||||||||||| || |||||    
T  13023845 tgattttacgagttccgattttgctattctctttcgacttgaagtaaagtcccaatttt 13023903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 8367364 - 8367424
Alignment:
Q  60 atatttagcatta-tttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||| |||||||||||||| ||||| || ||||| ||||| ||||||||||||    
T  8367364 atatttagcattattttttgttttggtagaatcc-tcgattttaattgcaattttacaattt 8367424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8743794 - 8743672
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||| ||||||||||| |||||||||  || |||||| |||||||||  |||||| | | |||||  ||| ||||||||||||||| |||||||| |||     
T  8743794 tgtacaagtattttgtagactttaaactttgagtcatttatgactatgaacaatttaaaacatatatttaacattatttttgtttt-gtaaaatcaatca 8743696  T
Q  97 attttgattgcgattttacaattt 120  Q
     |||| |||||||| |||| ||||    
T  8743695 gttttaattgcgatattacgattt 8743672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 20812706 - 20812765
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||||||||||||||||  |||||||| ||||| || || ||||||||||||||| |||||    
T  20812706 atatttagcattattttc-ttttggtagaatccttcgatcttgattgcgattttaaaattt 20812765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 63 - 236
Target Start/End: Complemental strand, 3573851 - 3573674
Alignment:
Q  63 tttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcga 161  Q
    |||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||| |||| ||||||||| |||||||||||||| |||| |||    
T  3573851 tttagcattatttttgttttggtaaaactcatcgattttgattgcgattttacaatttcttatatctattctacaagagtagttgagtaaattcctacga 3573752  T
Q  162 ttttgatt--gattttacgagtcccgattttactattccc-tttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||  |||||||||||||| |||||| |||||||| ||| ||||||||||||||| |||||||||||||||||    
T  3573751 ttttgattgcgattttacgagtcctgattttgctattcccttttcgacctgaagtaaagtcccgattttgacaacctt 3573674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 23 - 239
Target Start/End: Original strand, 7223649 - 7223872
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat------ttagcattatttttgttttggtaaaatccatccattttgattgcgattttaca 116  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||      |||| ||||||||   |||||||||||||||  ||| ||||||||||||||||    
T  7223649 taaactaagtcatttatgactatataccatttataacatatattaatttagtattattttg--tttggtaaaatccattgattctgattgcgattttaca 7223746  T
Q  117 atttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagt 213  Q
    ||||| | |||| |||||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||    
T  7223747 atttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgacctgaagt 7223846  T
Q  214 aaagttccgattttgacaaccttgat 239  Q
    ||||| ||||||||||||||||||||    
T  7223847 aaagtcccgattttgacaaccttgat 7223872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 7918340 - 7918124
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcata--tttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||| ||||||||||||  ||| ||| ||||  ||||| |||||||||   ||||||||||||||| ||||||||||||||||||||||||    
T  7918340 taaattaagtcatttatgactatatatcatttataacataaatttagtattattttt---ttggtaaaatccatcgattttgattgcgattttacaattt 7918244  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |||  |||||||||||||  |||||| |||| |||||||||||||||  ||||||||||||| |||| | ||||||||||| ||||||||||||||    
T  7918243 cctatattgattctacaaaagtccttgagtaaaattcttcgattttgattgcaattttacgagtcctgattctgctattccctttcgacctgaagtaaag 7918144  T
Q  218 ttccgattttgacaaccttg 237  Q
      ||||||||||||||||||    
T  7918143 ccccgattttgacaaccttg 7918124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 19748509 - 19748688
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||| || || |||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||  |||||| ||||||||    
T  19748509 atatttagtattattatt-ttctggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 19748607  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||||  |||||||||| |||||||||| |||||||||||  ||||||| |||||| ||||||||||||||||||    
T  19748608 cgattttgattgcgattttacgaatcccgattttgctattccctttcaacctgaattaaagtcccgattttgacaaccttg 19748688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 26053288 - 26053074
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| ||||| || ||||||||||||| ||| ||| |||||  |||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  26053288 taaactaagttatttatgactatataccatttataacatatagttagtattattatt-ttttggtaaaatccatcgattttgattgcgattttacaattt 26053190  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    |   |||| |||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  26053189 ccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaag 26053090  T
Q  218 ttccgattttgacaac 233  Q
    | | ||||||||||||    
T  26053089 tcctgattttgacaac 26053074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 26073341 - 26073127
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| ||||| || ||||||||||||| ||| ||| |||||  |||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||    
T  26073341 taaactaagttatttatgactatataccatttataacatatagttagtattattatt-ttttggtaaaatccatcgattttgattgcgattttacaattt 26073243  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    |   |||| |||||||||||||  |||||| ||||| |||||||||||||  ||||||||||||||| ||||| ||||| ||||| ||||||||||||||    
T  26073242 ccaatatcgattctacaaaagtcattgagtaaaatcattcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaag 26073143  T
Q  218 ttccgattttgacaac 233  Q
    | | ||||||||||||    
T  26073142 tcctgattttgacaac 26073127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 74 - 237
Target Start/End: Complemental strand, 22498380 - 22498214
Alignment:
Q  74 ttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg-- 170  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||  ||||||||| || ||| ||||||||||      
T  22498380 ttttttttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtctttgagtaaaatcgttcaattttgattgcg 22498281  T
Q  171 attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||||||| ||||| ||||||||||| ||||||||||||||| || |||||||||||||||    
T  22498280 attttacgagtcccaattttgctattccctttcgacctgaagtaaagtcccaattttgacaaccttg 22498214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 11327497 - 11327336
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gatttt 175  Q
    ||||||||||||||||| |||||| |||||||||||||||||| | |||| |||||||||||||  |||||| |||| ||||||||||||||  ||||||    
T  11327497 ttttggtaaaatccatcgattttggttgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaattcttcgattttgattgcgatttt 11327398  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||| ||||||| |||||||||||  |||||||||||||  ||||||||||||||||||    
T  11327397 acgagtctcgattttgctattccctttcaacctgaagtaaagccccgattttgacaaccttg 11327336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 79 - 237
Target Start/End: Complemental strand, 17543665 - 17543504
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gatttt 175  Q
    ||||||||||||||||| |||||||||||||||||||||||||   |||| |||||||||||||  |||||| |||||||||||||||||||  ||||||    
T  17543665 ttttggtaaaatccatcgattttgattgcgattttacaatttccaatatcgattctacaaaagtccttgagtaaaatccttcgattttgatttcgatttt 17543566  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    | ||||||||||||| ||||||| ||| ||||||||||||||| || ||||| |||||||||    
T  17543565 atgagtcccgattttgctattccttttcgacctgaagtaaagtcccaattttaacaaccttg 17543504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 17103393 - 17103550
Alignment:
Q  83 ggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacga 179  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||  |||||| |||||||||| | ||||||  ||||||||||    
T  17103393 ggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcggtattgattgcgattttacga 17103492  T
Q  180 gtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||| ||||||  |||||||||| ||| ||||||||||| ||||||||||||||||||    
T  17103493 gtcctgattttgttattccctttcgacttgaagtaaagtcccgattttgacaaccttg 17103550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 23897948 - 23898165
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| ||| ||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  23897948 taaactaagtcatttatgactatataccatttataacatatatttagtatttttttt-ttttggtaaaatccatcgattttgattgagattttacaattt 23898046  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||| ||||||| ||||||||||||| |||||||||||||||| ||  |||||||||| |  ||||||| || ||| | || ||||||||| |||     
T  23898047 cttatatcgattctac-aaagtagttgagtaaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacctgaagcaaaa 23898145  T
Q  218 ttccgattttgacaaccttg 237  Q
    | ||||||||||||| ||||    
T  23898146 tcccgattttgacaatcttg 23898165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 87 - 218
Target Start/End: Complemental strand, 15528037 - 15527903
Alignment:
Q  87 aaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcc 183  Q
    ||||||||| |||| |||||||||||||||||||| | |||| |||||||||||||  |||||| |||||||||||||||||||  |||||| ||||| |    
T  15528037 aaatccatcgatttcgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttccgagttc 15527938  T
Q  184 cgattttactattccctttagacctgaagtaaagt 218  Q
    ||||||| ||||| ||||| |||||||||||||||    
T  15527937 cgattttgctatttcctttcgacctgaagtaaagt 15527903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 60 - 239
Target Start/End: Complemental strand, 27233252 - 27233071
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    |||||||| |||||| || || |||||||||| ||| ||||||||||||||||||||||||  | || | ||||||| ||||   ||||||||| |||||    
T  27233252 atatttagtattattgtt-ttatggtaaaatctatcgattttgattgcgattttacaattttctatagcgattctactaaagaccttgagtaaaatcctt 27233154  T
Q  159 cgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
    | ||||||||||  |||||| |||||||||||||   ||||||||| ||||||||||||||   |||||||||||||||||||    
T  27233153 caattttgattgcgattttatgagtcccgattttgtcattcccttttgacctgaagtaaaggctcgattttgacaaccttgat 27233071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 4841783 - 4841672
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||| ||||  |||||||||||||||||| |||| ||||||||||||||||||| ||||||| |  | ||||||||||||||||||||| ||||||||    
T  4841783 atattttgcatattttttgttttggtaaaatacatcgattttgattgcgattttacgatttcttatcccgattctacaaaagtagttgagtaaaatcctt 4841684  T
Q  159 cgattttgattg 170  Q
     |||||||||||    
T  4841683 tgattttgattg 4841672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 84 - 236
Target Start/End: Complemental strand, 30912336 - 30912181
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgag 180  Q
    |||||||||||| ||| ||||||||||| ||  ||||||| |||| ||| ||||||||||||||| | ||||||||| |||||| ||  ||||||||||     
T  30912336 gtaaaatccatcgattatgattgcgattctatgatttcttatatcgattttacaaaagtagttgaataaaatccttcaattttggttgagattttacgat 30912237  T
Q  181 tcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |  ||||||| |||||| ||||  |||||||| ||| |||||||||||||||||||    
T  30912236 tatcgattttgctattctctttcaacctgaagcaaaattccgattttgacaacctt 30912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 2912191 - 2912093
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgat--tgattttacga 179  Q
    ||||||||| || ||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||| |||| |||  |||||||||||    
T  2912191 gtaaaatccgtcgattttgattgcgattttacaatttcttataacaattctacaaaagtagttgagtaaaatccttcaatttcgattatgattttacga 2912093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 239
Target Start/End: Original strand, 27890488 - 27890743
Alignment:
Q  3 tataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    |||| |||||||||||||||| ||  |||| |||| ||||||||||| ||||| ||| |||||  ||||||||||||||||||||||| ||| | || ||    
T  27890488 tatatgtattttgtggactttgaactttaactcatttatgactatatgcaatttataacatatatttagcattatttttgttttggtagaattc-tcgat 27890586  T
Q  99 tttgattgcgattttacaa-------------tttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtc 182  Q
    ||||||||||||||||| |             | || | |||| |||||||||||||  |||||| ||||||||| |||||||||  ||||||||||||     
T  27890587 tttgattgcgattttacgagtcctgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcaattttgattacgattttacgagtt 27890686  T
Q  183 ccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
    || ||||||||| |||||||  || |||||||||||  ||| |||||||||||||||    
T  27890687 ccaattttactactccctttcaacttgaagtaaagtctcgaatttgacaaccttgat 27890743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 60 - 145
Target Start/End: Complemental strand, 10508971 - 10508886
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagt 145  Q
    |||||||  |||||| || ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  10508971 atatttattattattattattttgataaaatccatcaattttgattgcgattttacaatttcttatatcgattctacaaaagtagt 10508886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 27614518 - 27614434
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaac 233  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||||| | |  |||||||||||    
T  27614518 aaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcgacctgaagtaaattcctaattttgacaac 27614434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 238
Target Start/End: Complemental strand, 33593180 - 33592924
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||||||||||||| ||||| |||  || |||||   |||||||||| ||||| ||| |||||  ||| |||||||||| |||||||| ||||||||     
T  33593180 tgtataagtattttgtagacttgaaactttgagtcaataatgactatatgcaatttataacatatgtttaacattatttttcttttggtagaatccatcg 33593081  T
Q  97 attttgattgcgattttacaatttct-------------tgtatcaattctacaaaagtagttgagtaaatccttcgattttgattg--attttacgagt 181  Q
    ||||||||||||||||||  |||| |             | ||||||||||||||||||||||||||||||| |||||||| |||||  ||||||||| |    
T  33593080 attttgattgcgattttatgatttttgattttgctatcctatatcaattctacaaaagtagttgagtaaatcattcgatttcgattgcaattttacgatt 33592981  T
Q  182 cccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
      | |||||  |||||||||| ||  ||||| ||| | ||||||||||||| |||||    
T  33592980 ttcaattttgttattccctttcgatatgaagcaaaatcccgattttgacaatcttga 33592924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20432622 - 20432500
Alignment:
Q  1 tgtataagtattttgtggactttaaatta--agtcatatatgactatatacaattaatagcatat-ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||| ||||||||||||||||| |||||   ||| || ||||||||||| ||||| ||| ||||| |||| |||||||||||||||||  |||||||| |    
T  20432622 tgtaaaagtattttgtggacttaaaattttgagttatttatgactatatgcaatttataacatatattagtattatttttgttttggtggaatccatcga 20432523  T
Q  98 ttttgattgcgattttacaattt 120  Q
    |||||||||||| ||||| ||||    
T  20432522 ttttgattgcgaatttacgattt 20432500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 9 - 115
Target Start/End: Complemental strand, 5422665 - 5422564
Alignment:
Q  9 tattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattg 106  Q
    ||||||||||||||||||||  ||||| |||||||||||| |||| ||| |||||  ||||||||||||||||||||||||||||      |||||||||    
T  5422665 tattttgtggactttaaattg-gtcatttatgactatatataatttataacatatatttagcattatttttgttttggtaaaatc------ttttgattg 5422573  T
Q  107 cgattttac 115  Q
    |||||||||    
T  5422572 cgattttac 5422564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 18490654 - 18490538
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||| ||||||||||||||||| | | ||| || ||  ||||||||| ||| ||| |||||  ||| ||||||||||| ||||||| |||||||| ||    
T  18490654 tgtatatgtattttgtggactttatactgagttatttagcactatatacgatttataacatatatttatcattatttttgatttggtagaatccatcaat 18490555  T
Q  99 tttgattgcgattttac 115  Q
    |||||||||||||||||    
T  18490554 tttgattgcgattttac 18490538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 20400099 - 20399994
Alignment:
Q  5 taagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattt 100  Q
    ||||||||||||||||||||||  || ||| || ||||||||||| ||||| ||| |||||  ||| ||||||||||||||||||  |||||||| ||||    
T  20400099 taagtattttgtggactttaaacattgagttatttatgactatatgcaatttataacatatatttatcattatttttgttttggtggaatccatcgattt 20400000  T
Q  101 tgattg 106  Q
    ||||||    
T  20399999 tgattg 20399994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 239
Target Start/End: Original strand, 21354942 - 21355032
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
    |||||| |||||||||||||  ||||||||||||| |||||| |||||||||||  || ||||||||| | || |||||||||||||||||    
T  21354942 aaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaatcccaattttgacaaccttgat 21355032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31407408 - 31407531
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    ||||||||||||||||||| ||||||  || |||||| |||||| |||| ||||| ||| |||||  ||| ||||||||||||||||||| ||| | ||     
T  31407408 tgtataagtattttgtggaatttaaactttgagtcatttatgacaatatgcaatttataacatatatttaacattatttttgttttggtagaatgcgtcg 31407507  T
Q  97 attttgattgcgattttacaattt 120  Q
    | |||||||| |||||||| ||||    
T  31407508 actttgattgtgattttacgattt 31407531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 17250250 - 17250412
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttc--gattttgatt--gatt 173  Q
    ||||||||||||||||  ||||||||||||| ||||||||||  | |  | ||||||| ||||   |||||| |||||||||   |||||||||  ||||    
T  17250250 ttttggtaaaatccattgattttgattgcgaatttacaattttctatggcgattctactaaagaccttgagtaaaatccttctttattttgattgcgatt 17250349  T
Q  174 ttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||| | ||  | ||| ||||| ||||||||||||||| |||||||||| |||||||    
T  17250350 ttacgagtccc-aattcgccatttcctttcgacctgaagtaaagtcccgattttgataaccttg 17250412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 172 - 231
Target Start/End: Original strand, 31108445 - 31108504
Alignment:
Q  172 ttttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgaca 231  Q
    |||||||| || ||||||| ||||||||||| ||||||||||||||| | ||||||||||    
T  31108445 ttttacgaatctcgattttgctattccctttcgacctgaagtaaagtcctgattttgaca 31108504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31108257 - 31108377
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcat--atttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||| ||||||| ||  ||||||||| |||||||||   ||||| ||| |||  ||||||| ||| |||||||||| || ||||| ||     
T  31108257 tgtatatgtattttgcggactttgaactttaagtcatttatgactatg--caatttataacatgtatttagctttacttttgttttgttagaatcc-tcg 31108353  T
Q  97 attttgattgcgattttacaattt 120  Q
    ||||||||||||||||||| ||||    
T  31108354 attttgattgcgattttacgattt 31108377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 120
Target Start/End: Complemental strand, 4596843 - 4596761
Alignment:
Q  43 tatatacaattaatagcat--atttagcattatttttg---ttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||| ||||||||| |||  |||||||||||||||||   |||||||| |||||| | ||||| ||||||||||||| ||||    
T  4596843 tatatgcaattaataacatgtatttagcattatttttgctgttttggtagaatccaccgatttttattgcgattttacgattt 4596761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 7223610 - 7223647
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  7223610 aaaatccatcgattttgattgcgattttacgatttctt 7223647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Original strand, 23897910 - 23897946
Alignment:
Q  87 aaatccatccattttgattgcgattttacaatttctt 123  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  23897910 aaatccatcgattttgattgcgattttacgatttctt 23897946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 33583555 - 33583444
Alignment:
Q  125 tatcaattctacaaaagtagttgagtaaatccttcgattttgatt--gattttacgagtcccgatt-ttactattccctttagacctgaagtaaagttcc 221  Q
    |||| |||||||||||||  || ||||||  ||||||||||||||  |||||||||| |  ||||| || |||  |||||| |||| |||||||| | ||    
T  33583555 tatcgattctacaaaagtccttaagtaaaatcttcgattttgattttgattttacgatttacgattattgctaacccctttcgaccggaagtaaaatccc 33583456  T
Q  222 gattttgacaac 233  Q
    ||||||||||||    
T  33583455 gattttgacaac 33583444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 101; Significance: 4e-50; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 26565562 - 26565323
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat-ttagcattatttttgttttggtaaaatccatccatt 99  Q
    |||||||||||||||||||||||||| | |||||| |||||||||||||| || ||| ||||| ||| |||||||||||||||||||||||||||| |||    
T  26565562 tgtataagtattttgtggactttaaactgagtcatttatgactatatacagtttataacatatattaacattatttttgttttggtaaaatccatcaatt 26565463  T
Q  100 ttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactatt 196  Q
    |||||||| ||||||| |||| || |||  ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |  || ||||  | ||    
T  26565462 ttgattgcaattttacgattttttatattgattctacaaaagtagttgagtaaaatccttcgattttgattacgattttacgattttcgtttttgttctt 26565363  T
Q  197 ccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||  |||||||| ||  | || ||||||||||||||    
T  26565362 cccttttaacctgaagaaagatcccaattttgacaacctt 26565323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 17811546 - 17811702
Alignment:
Q  83 ggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacga 179  Q
    ||||||||||||| ||||||||||||||||||||||||  | |||| |||||||||||||  ||||||||| || ||||||||||||||  |||||||||    
T  17811546 ggtaaaatccatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttgagtaaaatctttcgattttgattgcgattttacga 17811645  T
Q  180 gtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
     |||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||    
T  17811646 atcccgattttgctattcccttttgacctgaagtaaagtcccgattttgacaacctt 17811702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 24989708 - 24989549
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--atttt 175  Q
    ||||||||||||||||| |||||||||||||||||| |||||| | |||| |||||||||||||  || |||||| |||||||||||||||||  |||||    
T  24989708 ttttggtaaaatccatcgattttgattgcgattttataatttcctatatcgattctacaaaagtcctt-agtaaaatccttcgattttgattgccatttt 24989610  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||||||||||||||  |||||||||| ||||| ||||||||| |||||||||||||||||    
T  24989609 acgagtcccgattttgttattccctttcgacctaaagtaaagtcccgattttgacaacctt 24989549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 236
Target Start/End: Original strand, 5058666 - 5058882
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||| || |||||||||| |||||| ||||||||||||||||||||||||    
T  5058666 taaactaagtcatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaagtccatcgattttgattgcgattttacaattt 5058764  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
     || |||| |||| |||||| |  |||| |||| |||||||||||||||||  ||||||||| | |||||||| ||||||||||| || |||||||||||    
T  5058765 tttatatcgattc-acaaaattccttgattaaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttttgatctgaagtaaag 5058863  T
Q  218 ttccgattttgacaacctt 236  Q
    | |||||||||||||||||    
T  5058864 tcccgattttgacaacctt 5058882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 44944837 - 44944620
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||| || |||||||||| || ||| ||||||||||||||||||||||||    
T  44944837 taaactaagtcatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaagtctatcgattttgattgcgattttacaattt 44944739  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||| |||||||||||||  || ||| ||||  ||||||||| |||  ||||||||||||||||  ||| ||||| ||||| || |||||||||||    
T  44944738 cttatatcgattctacaaaagtccttaagtaaaattgttcgattttaattgcgattttacgagtcccgcatttgctatttcctttcgatctgaagtaaag 44944639  T
Q  218 ttccgattttgacaacctt 236  Q
    | |||||||||||||||||    
T  44944638 tcccgattttgacaacctt 44944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 5715473 - 5715635
Alignment:
Q  73 tttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt-- 169  Q
    ||||| |||||||||||| |||| |||||||||||||||||| |||||| | |||| |||||||||||||  |||||| |||||| ||||||||||||      
T  5715473 ttttttttttggtaaaattcatcgattttgattgcgattttataatttcctatatcgattctacaaaagtccttgagtaaaatccctcgattttgattgc 5715572  T
Q  170 gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||||||||||||||| ||||| ||||| |||    |||||||| |||||||||||||||||    
T  5715573 gattttacgagtcccgatttttctatttcctttcgac----agtaaagtcccgattttgacaacctt 5715635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 234
Target Start/End: Complemental strand, 20570877 - 20570662
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||| || |||||||||| |||||| |||||||||| ||||||| |||||    
T  20570877 taaaataagtcatttatgactatataccatttataacatatatttagtattattctt-ttttggtaaagtccatcgattttgattgtgattttataattt 20570779  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||| |||||||||||||  |||||| ||||| ||| |||||||||  ||||||| ||||| | |||||  ||||||||||  |||||||||| ||    
T  20570778 cttatatcgattctacaaaagtccttgagtaaaatctttcaattttgattgcgattttatgagtctcaattttgttattccctttcaacctgaagtagag 20570679  T
Q  218 ttccgattttgacaacc 234  Q
    | |||||||||||||||    
T  20570678 tcccgattttgacaacc 20570662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 238
Target Start/End: Original strand, 4247532 - 4247712
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| ||||||||| ||| ||||||||||||| ||||||||||||||||||  ||||||| |||| ||||||||||| |  |||||| ||||||||    
T  4247532 atatttagtattattttt-tttaggtaaaatccatcgattttgattgcgattttatgatttcttatatcgattctacaaaaatccttgagtaaaatcctt 4247630  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
     || |||||||  |||||||||| |||| |||||  |||||||||| ||| ||||||||||| || |||||||||| |||||    
T  4247631 tgaatttgattgcgattttacgaatcccaatttttgtattccctttcgacttgaagtaaagtcccaattttgacaatcttga 4247712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 7730313 - 7730206
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaatcc-tt 158  Q
    |||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| || ||    
T  7730313 atatttagtattttttttttgttggtaaaatccatcaattttgattgcgattttacaatttcttatatcaattatacaaaagtagttgagtaaaaccatt 7730214  T
Q  159 cgattttg 166  Q
    ||||||||    
T  7730213 cgattttg 7730206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 86 - 237
Target Start/End: Original strand, 39182357 - 39182511
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtc 182  Q
    |||||||||| |||||| |||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| ||  |||||||||| |     
T  39182357 aaaatccatcgattttggttgcgattttacaatttcttatatcgattctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacgattg 39182456  T
Q  183 ccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     ||||||| || ||| |||| || |||||| ||| |  |||||||||||||||||    
T  39182457 tcgatttttctcttctctttggaactgaagcaaaatcacgattttgacaaccttg 39182511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 79 - 170
Target Start/End: Complemental strand, 8329979 - 8329887
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||||||||||  ||||||||||| ||||||| ||||||| |||||||||||||||||||||||||| |||||||| |||||||||||    
T  8329979 ttttggtaaaatccattgattttgattgcaattttacgatttcttatatcaattctacaaaagtagttgagtaaaatcctttgattttgattg 8329887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 86 - 238
Target Start/End: Original strand, 11326484 - 11326639
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtc 182  Q
    |||||| ||| ||||||||||||||||||||||||| | |||  |||| ||||||||  ||||||||| | |||| ||||||||||  |||||| |||||    
T  11326484 aaaatctatcgattttgattgcgattttacaatttcctatattgattccacaaaagtccttgagtaaaatacttcaattttgattgtgattttaagagtc 11326583  T
Q  183 ccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
    || ||||| |||||| ||||  ||||||| |||||||| |||||||||||||||||    
T  11326584 ccaattttgctattctctttccacctgaaataaagttctgattttgacaaccttga 11326639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 170
Target Start/End: Complemental strand, 8346485 - 8346374
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||| || ||||||||||||||||  ||| |||||| |||||||  ||||||| |||||||||||||||||||||||||| ||||||||    
T  8346485 atatttagtattattatttttttggtaaaatccattgattatgattgagattttatgatttcttatatcaattctacaaaagtagttgagtaaaatcctt 8346386  T
Q  159 cgattttgattg 170  Q
     |||||||||||    
T  8346385 tgattttgattg 8346374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 14055453 - 14055610
Alignment:
Q  81 ttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttac 177  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| ||||  |||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  14055453 ttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 14055552  T
Q  178 gagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
     | |  ||||||| ||  || |||| ||||||||| |||  ||||||||||||||||||    
T  14055553 cattgtcgattttgctcatctctttcgacctgaagcaaa-atccgattttgacaacctt 14055610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 81 - 236
Target Start/End: Original strand, 14365481 - 14365638
Alignment:
Q  81 ttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttac 177  Q
    ||||||||||||||  ||||||||||||||||| ||||||||| ||||  |||||||||||||||||||| |||||||||||||||| ||  ||||||||    
T  14365481 ttggtaaaatccattgattttgattgcgattttgcaatttcttatatcgtttctacaaaagtagttgagtaaaatccttcgattttggttgcgattttac 14365580  T
Q  178 gagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
     | |  ||||||| ||  || |||| ||||||||| |||  ||||||||||||||||||    
T  14365581 cattgtcgattttgctcatctctttcgacctgaagcaaa-atccgattttgacaacctt 14365638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 60 - 170
Target Start/End: Original strand, 30294421 - 30294532
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    ||||||| |||||| ||||||||||||||||||||| | |||||||| |||||||  ||||||| |||| |||||| |||||||||| ||| ||||||||    
T  30294421 atatttaacattatctttgttttggtaaaatccatcgagtttgattgtgattttaggatttcttttatcgattctataaaagtagttaagtaaaatcctt 30294520  T
Q  159 cgattttgattg 170  Q
    ||||||||||||    
T  30294521 cgattttgattg 30294532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 24725469 - 24725315
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgtttt----ggtaaaatccatccattttgattgcgattttaca 116  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| ||||||||  ||||    ||||||||||||| ||||||||||||||||||||    
T  24725469 taaactaagtcatttatgactatataccatttataacatatatttagtattattttattttttttgggtaaaatccatcgattttgattgcgattttaca 24725370  T
Q  117 atttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||| | |||| |||||||||||||  |||||| |||||||| |||||||||||    
T  24725369 atttcctatatcgattctacaaaagtccttgagtaaaatcctttgattttgattg 24725315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 8329909 - 8329822
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||| |  ||||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  8329909 gtaaaatcctttgattttgattgcgattttacgatttcttatatcaattctacaaaagtagttgagtaaaatccttcaattttgattg 8329822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 234
Target Start/End: Original strand, 8304326 - 8304438
Alignment:
Q  125 tatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttcc 221  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||  |||||||||||| ||||||| ||| || |||| ||| |||||||||||  |    
T  8304326 tatcaattctacaaaagtccttgagtaaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaagtctc 8304425  T
Q  222 gattttgacaacc 234  Q
    |||||||||||||    
T  8304426 gattttgacaacc 8304438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 70 - 237
Target Start/End: Original strand, 8572323 - 8572491
Alignment:
Q  70 ttatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaa-atccttcgattttgat 168  Q
    |||||||| ||| ||||||||||||  ||||||||||| |||||| |||||| | ||||||||||||||| ||  |||| ||| ||| ||||||||||||    
T  8572323 ttatttttttttgggtaaaatccattgattttgattgcaattttataatttc-tatatcaattctacaaatgtccttgattaacatctttcgattttgat 8572421  T
Q  169 tg-attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||   |||| ||||||| || |||||||||||||| ||| |||  |||||| || |||||||||||||||    
T  8572422 tgcgatttaagagtcccaatattactattccctttcgacttgagataaagtcccaattttgacaaccttg 8572491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 229
Target Start/End: Original strand, 27221555 - 27221762
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttct 122  Q
    |||| |||||||| ||||||||||||| ||| ||| ||||| ||   |  ||||| |||||||| ||||  || ||||| |||||||||||||||||||     
T  27221555 taaactaagtcatttatgactatataccatttataacatatata---tagttttttttttggtacaatcagtcgattttaattgcgattttacaatttcc 27221651  T
Q  123 tgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacct-gaagtaaagt 218  Q
    |  ||| |||||||||||||    |||| |||||||||||||||||||  |||||||||| |||||||||| |||| | |||| |||||  |||||||||    
T  27221652 tacatcgattctacaaaagtctccgagtaaaatccttcgattttgattgcgattttacgaatcccgattttgctatactctttcgacctaaaagtaaagt 27221751  T
Q  219 tccgattttga 229  Q
     ||||||||||    
T  27221752 cccgattttga 27221762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 1981351 - 1981099
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||||||||||| || || |||||| ||||||||||| ||||| ||| |||||  |||||||||||||||||||| || ||||| || |    
T  1981351 tgtatatgtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttagcattatttttgttttgatagaatcc-tcga 1981253  T
Q  98 ttttgattgcgattttacaa-------------tttcttgtatcaattctacaaaagtagttgagtaaatccttcgattttgatt--gattttacgagtc 182  Q
    |||||||||| ||||||| |             | || | |||| ||||||| ||||   |||||| ||||||||||||||||||  ||||||||||||     
T  1981252 ttttgattgcaattttacgagtcccgactttgctatcctatatcgattctactaaagaccttgagt-aatccttcgattttgattacgattttacgagtt 1981154  T
Q  183 ccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    || ||||| ||| ||||||| ||| ||||||||||| |||||||||| |||||||    
T  1981153 ccaatttttctaatccctttcgacttgaagtaaagtcccgattttgataaccttg 1981099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 60 - 165
Target Start/End: Complemental strand, 27509364 - 27509260
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||||||  |||||||||||| ||| | ||| ||||||||||||||||||||| |||| |||||| |||||||||||||| ||||||||    
T  27509364 atatttagtattattttt--tttggtaaaatcaatcgaattttattgcgattttacaatttcttatatcgattctataaaagtagttgagtaaaatcctt 27509267  T
Q  159 cgatttt 165  Q
    | |||||    
T  27509266 caatttt 27509260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 8343731 - 8343645
Alignment:
Q  85 taaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||||||||  | ||||||||||||||||| |||| || |||||||||||||||||||||||||| |||| |||||||||||||||    
T  8343731 taaaatccattgactttgattgcgattttacgattttttatatcaattctacaaaagtagttgagtaaaatacttcgattttgattg 8343645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 25842752 - 25842505
Alignment:
Q  8 gtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgat 104  Q
    |||||||||||||||| || || |||||| ||||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || ||||||||    
T  25842752 gtattttgtggactttgaactttagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgat 25842654  T
Q  105 tgcgattttacaa-------------tttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgatt 188  Q
    ||||||||||| |             | || |  ||| |||||||||||||   ||||| ||||||| | |||||||||  |||||||||||||||||||    
T  25842653 tgcgattttacgagtcccgactttgctatcctacatcgattctacaaaagttcatgagtaaaatcctccaattttgattgcgattttacgagtcccgatt 25842554  T
Q  189 ttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    || ||| ||||||| ||| ||||||||||| || ||||||| |||||||    
T  25842553 ttgctactccctttcgacttgaagtaaagtcccaattttgataaccttg 25842505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 11325115 - 11325246
Alignment:
Q  23 taaattaagtcatatatgactatatac-aatta---atagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaat 118  Q
    |||| |||||||| ||||||||||||| |||||   ||| |||||||||  || ||||| ||||||||||||||||| ||||||||||  ||||||||||    
T  11325115 taaactaagtcatttatgactatataccaattatttataacatatttag--tttttttttttttggtaaaatccatcgattttgattgtaattttacaat 11325212  T
Q  119 ttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    ||| | |||||||| |||| |||||||||||||||    
T  11325213 ttc-tatatcaattttacagaagtagttgagtaaa 11325246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 83 - 166
Target Start/End: Complemental strand, 21846378 - 21846294
Alignment:
Q  83 ggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttg 166  Q
    ||||||||||||| |||||||||| |||||||| ||||||| |||| |||||| |||||||||||| | ||||||||||||||||    
T  21846378 ggtaaaatccatcaattttgattgtgattttacgatttcttatatcgattctataaaagtagttgattaaaatccttcgattttg 21846294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 8346396 - 8346313
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttg 166  Q
    ||||||||| |  |||||||||||||| |||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||||    
T  8346396 gtaaaatcctttgattttgattgcgatattacgatttcttatatcaattctataaaagtagttgagtaaaatccttcgattttg 8346313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 17809142 - 17809021
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||||   || || ||| | |||||| ||||| ||||| ||||| ||| |||||  ||||||||||||||||||||||| |||| ||  ||    
T  17809142 tgtataagtatttttcagatttaaaactgagtcatttatgattatatgcaatttataacatatatttagcattatttttgttttggtagaatctatgaat 17809043  T
Q  99 tttgattgcgattttacaattt 120  Q
    ||||||||||||||||| ||||    
T  17809042 tttgattgcgattttacgattt 17809021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 235
Target Start/End: Original strand, 4574892 - 4575083
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt-------------cttgtatcaattctacaaaagtagtt 146  Q
    ||||| |||||||||||| ||||||||||||| ||| ||||||| ||||||||||| ||||             | | |||| |||||||||||||||||    
T  4574892 atattaagcattatttttattttggtaaaatctatcgattttgactgcgattttacgattttcaattttactatcctatatcgattctacaaaagtagtt 4574991  T
Q  147 gagta-aatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacct 235  Q
    ||||| ||| ||| ||||||||||  |||||||||| |   ||||||||||||||||||  |||||||| ||| |  | |||||||||||||    
T  4574992 gagtagaattctttgattttgattgcgattttacgatttttgattttactattccctttcaacctgaagaaaaatctcaattttgacaacct 4575083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 6916965 - 6917064
Alignment:
Q  71 tatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt 169  Q
    ||||||| | |||||||||| |||| ||||||||||| |||||| |||||||| |||| ||| ||  ||||||||||||| ||||||||| |||||||||    
T  6916965 tatttttttgttggtaaaattcatcgattttgattgcaattttataatttcttatatcgatt-tatgaaagtagttgagtaaaatccttcaattttgatt 6917063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 22687194 - 22687042
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgat--tgatttt 175  Q
    ||||| ||||||||||| ||||||||||||||||        ||| |||| ||||||||||||||||||||| |||| |||| |||||| |  |||||||    
T  22687194 ttttgataaaatccatcaattttgattgcgattt--------cttatatcgattctacaaaagtagttgagtaaaattcttcaattttggttgtgatttt 22687103  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||| || ||||||| || ||| |||| || |||||| ||| | |||||||| ||||||||    
T  22687102 acgattctcgattttgctcttctctttcgatctgaagcaaaatcccgattttaacaacctt 22687042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 97 - 212
Target Start/End: Original strand, 1977761 - 1977878
Alignment:
Q  97 attttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttact 193  Q
    ||||||||||||||||||  ||||||| |||| |||||| |||| || |||||| |||||||||||||||||||  |||||||||| |  ||||||| ||    
T  1977761 attttgattgcgattttaggatttcttatatcgattcta-aaaaataattgagtaaaatccttcgattttgattgcgattttacgattgtcgatttttct 1977859  T
Q  194 attccctttagacctgaag 212  Q
     ||| |||| |||||||||    
T  1977860 cttctctttcgacctgaag 1977878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 23618457 - 23618341
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| ||||||||| |||||| || || |||||| ||||||||||| ||||| |||  ||||  ||| ||||||||||||||||||| ||||| || |    
T  23618457 tgtatatgtattttgtagactttgaactttagtcatttatgactatatgcaatttataatatatatttaacattatttttgttttggtagaatcc-tcga 23618359  T
Q  98 ttttgattgcgattttac 115  Q
    |||||||| |||||||||    
T  23618358 ttttgattacgattttac 23618341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 60 - 149
Target Start/End: Complemental strand, 26617429 - 26617342
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgag 149  Q
    |||||||| ||||||||| |||  |||||||| ||| |||||||||||||||||||||||| || ||||  |||||||||| || |||||    
T  26617429 atatttagtattattttttttt--gtaaaatcaatcgattttgattgcgattttacaattttttatatcctttctacaaaaataattgag 26617342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 115
Target Start/End: Complemental strand, 8254096 - 8254018
Alignment:
Q  38 atgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    |||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || |||||||||||||||||||    
T  8254096 atgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgattgcgattttac 8254018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 8629694 - 8629635
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||    
T  8629694 atatttagcattatttttgttttggtagaatcc-tcggttttgattgcgattttacgattt 8629635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 9685211 - 9685070
Alignment:
Q  97 attttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttact 193  Q
    |||||||||| ||||||| |||||  |  ||| |||||| ||||||  | ||||||| |||||||||||| ||||  ||||||||||||  |||||| ||    
T  9685211 attttgattgtgattttaaaattttctaaatcgattctataaaagtcctcgagtaaaatccttcgattttaattgcgattttacgagtcttgattttgct 9685112  T
Q  194 attccctttagacctgaagtaaagttccgattttgacaacct 235  Q
    ||||| ||| |||| |||||||||| | ||| || |||||||    
T  9685111 attccttttcgaccagaagtaaagtccggatctttacaacct 9685070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 7307173 - 7307232
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||| ||||||||||||||||||| ||| | || ||||||||||||||||||| ||||    
T  7307173 atatttaacattatttttgttttggtagaat-cttcgattttgattgcgattttacgattt 7307232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 21157577 - 21157475
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattga--ttttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    ||||||||||||||||||| |||| |||||| |||||||||||  ||||||||       |||| ||||||||||| || |||||||||| |||| ||||    
T  21157577 attctacaaaagtagttgaataaaatccttcaattttgattgagattttacga-------ttttgctattcccttttgatctgaagtaaaattccaattt 21157485  T
Q  227 tgacaacctt 236  Q
    | ||||||||    
T  21157484 taacaacctt 21157475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 21157697 - 21157603
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccat 94  Q
    |||||||||||||||| |||||||||   |||||| || || ||||||| ||| ||| |  ||||||||||||| ||||||||||||| |||||||    
T  21157697 tgtataagtattttgtagactttaaa-cgagtcatttacgattatataccatttataacatatatttagcattacttttgttttggtagaatccat 21157603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 26340335 - 26340279
Alignment:
Q  64 ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||||||||||||| |||  ||| |||||||||| |||||||| ||||    
T  26340335 ttagcattatttttgttttggtagaatttatcgattttgattgtgattttacgattt 26340279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 157 - 237
Target Start/End: Complemental strand, 10285759 - 10285677
Alignment:
Q  157 ttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||||||  ||||||||| |   |||||| || ||| |||| ||||||||||||| | ||||||||||||||||||    
T  10285759 ttcgattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaatcccgattttgacaaccttg 10285677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 236
Target Start/End: Complemental strand, 23618313 - 23618204
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||  ||||||||| | |||||||||||||||  |||||  ||||||||||||| ||| |||||||  || | |||||||||   |||||    
T  23618313 attctacaaaagtccttgagtaaaattcttcgattttgattgcgattttcggagtcccgattttgctactccctttcaacttaaagtaaagtcttgattt 23618214  T
Q  227 tgacaacctt 236  Q
    ||| ||||||    
T  23618213 tgataacctt 23618204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 123
Target Start/End: Original strand, 27221511 - 27221553
Alignment:
Q  81 ttggtaaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||| |||||||||| ||||||||||||||||||| |||||||    
T  27221511 ttggcaaaatccatcgattttgattgcgattttacgatttctt 27221553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 22687695 - 22687658
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  22687695 aaaatccatcgattttgattgcgattttacgatttctt 22687658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 26281250 - 26281165
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||| ||||||||||  ||||||||| ||| |||||  ||||||| ||| ||||| ||||||||| | |||||||||||||||    
T  26281250 aaatccttcaattttgattgcgattttacga-tcctgatttg-ctattccttttcgacctaaagtaaagtcctgattttgacaacctt 26281165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 2e-49; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 23 - 235
Target Start/End: Original strand, 18843852 - 18844068
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||| ||||||| ||| ||| |||||  |||| |||| |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  18843852 taaactaagtcatttatgattatataccatttataacatatatttagtattaatttt-tttgggtaaaatccatcgattttgattgcgattttacaattt 18843950  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |||  |||||||||||||  ||||||||| | || ||||||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||    
T  18843951 cctatatggattctacaaaagtccttgagtaaaatactccgattttgattgcgattttacgagtcccgattttgctattccctttcgacctgaagtaaag 18844050  T
Q  218 ttccgattttgacaacct 235  Q
    ||||||||||||||||||    
T  18844051 ttccgattttgacaacct 18844068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 23 - 238
Target Start/End: Original strand, 19579079 - 19579300
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||| ||| ||| ||| |||||  || | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  19579079 taaactaagtcatttatgactatttaccattcataacatatatttggtattattttttttttggtaaaatccatcgattttgattgcgattttacaattt 19579178  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttac-tattccctttagacctgaagtaaa 216  Q
      | || | |||||||||||||  |||||| |||||||||||||||||||  ||||||| ||||||| ||||| | || ||||||| |||||||||||||    
T  19579179 tctataacgattctacaaaagtccttgagtgaaatccttcgattttgattgcgattttatgagtcccaattttgcttactccctttcgacctgaagtaaa 19579278  T
Q  217 gttccgattttgacaaccttga 238  Q
     | ||||||||||| |||||||    
T  19579279 atcccgattttgactaccttga 19579300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 83 - 236
Target Start/End: Original strand, 20321141 - 20321297
Alignment:
Q  83 ggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacga 179  Q
    ||||||||||||| ||||||||||||||||||||||||| | |||  |||||||||||||  || |||||| |||||| ||||||||||  |||||| ||    
T  20321141 ggtaaaatccatcgattttgattgcgattttacaatttcctatatagattctacaaaagtccttcagtaaaatccttcaattttgattgcgattttatga 20321240  T
Q  180 gtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||||||||||||| ||| ||||||||||||||| || ||||||||||||||    
T  20321241 gtcccgattttactattcctttttgacctgaagtaaagtcccaattttgacaacctt 20321297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 24648131 - 24648335
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaata--gcatatttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||    |||||||||||||||| |||||| |||||||||| | ||    
T  24648131 tgtataagtattttgtggactttaaattgagtcatttatgactatatacaatttataatatatatttagcattatttatgttttagtaaaatccaccgat 24648230  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactat 195  Q
    |||||||||||||||        || |||  ||||||||||||||||||||| |||||||| ||||||||||  |||||||||| |  |||||||||| |    
T  24648231 tttgattgcgatttt--------ttatattgattctacaaaagtagttgagtaaaatcctttgattttgattacgattttacgattttcgattttactct 24648322  T
Q  196 tccctttagacct 208  Q
    ||||||| |||||    
T  24648323 tccctttcgacct 24648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 41688618 - 41688441
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    |||||||| |||||||||  ||||||||||| |||| ||||||||||||||||||||||||  | |||| |||||||||||||  || |||||| |||||    
T  41688618 atatttagtattattttt--tttggtaaaattcatcgattttgattgcgattttacaattttctatatcgattctacaaaagtccttaagtaaaatcctt 41688521  T
Q  159 cgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||||||| |||  |||||| ||||||||||||| ||||||||||| | ||| ||||||||| |||||||||||||||||    
T  41688520 cgattttggttgcgattttaggagtcccgattttgctattccctttcgtcctaaagtaaagtcccgattttgacaacctt 41688441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 240
Target Start/End: Original strand, 43235062 - 43235226
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gatttt 175  Q
    ||||||||||||| ||| |||||||||||||||||||||||| || |||| |||||||||||||  |||||| |||||||||||||||||||  ||||||    
T  43235062 ttttggtaaaatcaatcgattttgattgcgattttacaattttttatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgatttt 43235161  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgatt 240  Q
    | |||| | |||||| ||||||||||| | |  |||||||||| || ||||||||||||||||||    
T  43235162 atgagtactgattttgctattccctttcgtctcgaagtaaagtcccaattttgacaaccttgatt 43235226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 27340122 - 27339962
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gatttt 175  Q
    |||| |||||||| ||| ||||||||||||||||||  ||||||| ||||||||||||||||||   ||||| |||||||||||||||||||  |||||     
T  27340122 tttttgtaaaatctatcgattttgattgcgattttaatatttcttatatcaattctacaaaagtccgtgagtaaaatccttcgattttgattgcgatttc 27340023  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||| |  ||||||| |||||||||||  || |||||||||||||||||||||||||||||    
T  27340022 acgattttcgattttgctattccctttcaacttgaagtaaagttccgattttgacaacctt 27339962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 43005813 - 43005634
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    ||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||| | |||| |||||||||||| |||||||| ||||| ||    
T  43005813 atatttagcattatttttgttttggtacaatccatcgattttaattgcgattttacgatttcctatatcgattctacaaaagaagttgagtaaaatcttt 43005714  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    | |||||||||  |||||||| | |  ||| ||| ||||| ||||| || || ||| ||| | |||||||||||||||||    
T  43005713 caattttgattgcgattttacaattttcgaattttctatttcctttcgatctaaagcaaaatcccgattttgacaacctt 43005634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 41427519 - 41427774
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||||||| ||  ||||||||| ||||||||||| ||||| |||  ||||  ||| ||||||||||||||||||| ||||| ||     
T  41427519 tgtatatgtattttgtggactttgaactttaagtcatttatgactatatgcaatttataatatatatttatcattatttttgttttggtagaatcc-tcg 41427617  T
Q  97 attttgattgcgattttacaatt-------------tcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgag 180  Q
    ||||||||||| |||||||||||             || | |||| |||||||||||||  | ||||||| |||||||||||||||||  ||||||||||    
T  41427618 attttgattgcaattttacaattccctattttgctatcctatatcgattctacaaaagtcctcgagtaaaatccttcgattttgattgcgattttacgag 41427717  T
Q  181 tcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||| ||| ||||||| |||  ||||||||||  |||||||||||||||||    
T  41427718 tcccgattttgctactccctttcgactcgaagtaaagtctcgattttgacaaccttg 41427774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 18051486 - 18051307
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||| || ||||||| ||||||||| |||||| |||||||||||||||||| | |||| |||||||||||||  || | | |||| |||    
T  18051486 atatttagtattattatt-ttttggttaaatccatcgattttgcttgcgattttacaatttcctatatcgattctacaaaagtccttcaataaaattctt 18051388  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     ||||||||||  |||| ||| |||||||||||| ||||||||||| ||||| ||||||| | ||||||||||| ||||||    
T  18051387 tgattttgattgcgattctacaagtcccgatttttctattccctttcgacctaaagtaaaatcccgattttgactaccttg 18051307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 38 - 236
Target Start/End: Complemental strand, 15052081 - 15051872
Alignment:
Q  38 atgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttc-----ttg-tatca 129  Q
    |||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || ||||||||||||||||||| | |||     ||| ||||     
T  15052081 atgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgattgcgattttacgagttccgactttgctatcc 15051983  T
Q  130 -attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgatt 225  Q
     |||||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||| ||| ||| ||||||||||| ||||||    
T  15051982 tattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcgacttgaagtaaagtcccgatt 15051883  T
Q  226 ttgacaacctt 236  Q
    |||| ||||||    
T  15051882 ttgataacctt 15051872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 73 - 237
Target Start/End: Complemental strand, 22645662 - 22645501
Alignment:
Q  73 tttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg- 170  Q
    ||||| |||||||||||| |||| |||||||||| |||||||||||||| | |||      |  | ||||  ||||||||| |||||||||||||||||     
T  22645662 ttttttttttggtaaaattcatcgattttgattgtgattttacaatttcctatat------tgtagaagtctttgagtaaaatccttcgattttgattgc 22645569  T
Q  171 -attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     |||||||||||| | ||||| |||||||||||||||| ||||||||||||||| |||||||||||||    
T  22645568 aattttacgagtctcaattttgctattccctttagaccagaagtaaagttccgactttgacaaccttg 22645501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 60 - 166
Target Start/End: Complemental strand, 38158216 - 38158111
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||||||  |||||||||||||||| |||||||||| ||||||||||||||||  ||  ||||||||||| ||||||||| ||||||||    
T  38158216 atatttagtattattttt--tttggtaaaatccatcaattttgattgtgattttacaatttcttacatagattctacaaaaatagttgagtaaaatcctt 38158119  T
Q  159 cgattttg 166  Q
    ||||||||    
T  38158118 cgattttg 38158111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 23 - 238
Target Start/End: Complemental strand, 23172420 - 23172217
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| |||  || |||||  |||  |||| |||| ||| |||||||| |||| ||||||||||||||||||||||||    
T  23172420 taaactaagtcatttatgactatataccatttgtaacatatatttaatattaatttt-tttgggtaaaattcatcgattttgattgcgattttacaattt 23172322  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattgattttacgagtcccgattttactattccctttagacctgaagtaaagtt 219  Q
    | | |||| |||||||||||||  |||||| |||| ||||||||||||      ||||||        ||| |||||||||||  |||||||||||||||    
T  23172321 cctatatcgattctacaaaagtctttgagtaaaattcttcgattttga------ttacga--------tttgctattccctttcaacctgaagtaaagtt 23172236  T
Q  220 ccgattttgacaaccttga 238  Q
    |||||||||||||||||||    
T  23172235 ccgattttgacaaccttga 23172217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 170
Target Start/End: Original strand, 26021464 - 26021605
Alignment:
Q  30 agtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtat 127  Q
    |||||| ||||||||||||||||| ||| |||||  ||||||||||| ||||||||||||||| ||||   ||| |||| |||||||| ||||||| |||    
T  26021464 agtcatttatgactatatacaatttataacatatatttagcattattattgttttggtaaaatgcatc--gtttaattgtgattttacgatttcttatat 26021561  T
Q  128 caattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    | ||  |||| |||||||||||| ||||||| ||||||||||||    
T  26021562 cgatgttacacaagtagttgagtaaaatcctacgattttgattg 26021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 84 - 153
Target Start/End: Complemental strand, 21059087 - 21059018
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    |||||||||||| |||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||    
T  21059087 gtaaaatccatcgattttgattgcgattttataatttcttatataaattctacaaaagtagttaagtaaa 21059018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 85 - 233
Target Start/End: Complemental strand, 19042356 - 19042206
Alignment:
Q  85 taaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgat--tgattttacgagt 181  Q
    ||||||||||| |||| |||||||||||||||||||| | |||| |||||||||||||  || ||| |||| |||||||||| ||  |||||||||||||    
T  19042356 taaaatccatcaattt-gattgcgattttacaatttcctatatcgattctacaaaagtccttaagtaaaattcttcgattttaattgtgattttacgagt 19042258  T
Q  182 cccgattttactattccctttagacctgaagtaaagttccgattttgacaac 233  Q
    ||| ||||| ||||| ||||| |||||  || ||||| | ||| ||||||||    
T  19042257 ccctattttgctatttcctttcgacctagagcaaagtcctgatattgacaac 19042206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 236
Target Start/End: Original strand, 19377713 - 19377957
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||||||| ||  ||||||||| ||||||||||| ||||| ||| |||||  ||| ||||||||||||||| ||| ||||| |      
T  19377713 tgtatatgtattttgtggactttgaactttaagtcatttatgactatatccaatttataacatatatttaacattatttttgtttttgtagaatccttgt 19377812  T
Q  97 -atttt--ga-ttgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattt 189  Q
     |||||  || || ||| ||||| ||  ||| |||| |||||||||||||  ||||||||| |||||||||||||||||  | ||||||| || ||||||    
T  19377813 gattttacgagtttcgagtttactat--cttatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgtaaatttacgattctcgattt 19377910  T
Q  190 tactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    | |||||||||||  || | ||||||||| | || ||||||||||||    
T  19377911 tgctattccctttccacttaaagtaaagtactgactttgacaacctt 19377957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 171 - 237
Target Start/End: Complemental strand, 6852406 - 6852340
Alignment:
Q  171 attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||| ||||||||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||    
T  6852406 attttatgagtcccgattttgctattccctttcgacctgaagtgaagtcccgattttgacaaccttg 6852340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 60 - 117
Target Start/End: Complemental strand, 9996937 - 9996880
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaa 117  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||    
T  9996937 atattaagcattatttttgttttggtaaaatccatcgattttgattgtaattttacaa 9996880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30804037 - 30804158
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagca--tatttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||||||||||||| || || ||| | |||||| |||||||||||  |||| |||  |  |||||||||||||||||||||||||| ||| ||   ||    
T  30804037 tgtataagtattttgtagaattgaaactgagtcatttatgactatatgtaattcataataaatatttagcattatttttgttttggtacaattcaatgat 30804136  T
Q  99 tttgattgcgattttacaattt 120  Q
    ||| ||||||||||||| ||||    
T  30804137 tttcattgcgattttaccattt 30804158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 30799506 - 30799682
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagca--tatttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||||||||||| || |||| ||| |||||||| |||||| ||| | |||| ||| ||  ||||||||||| ||||   ||| ||| |||||||| ||    
T  30799506 tgtataagtattttatgaacttgaaactaagtcatttatgaccatacataatttataacaaatatttagcattgttttgaattttgtacaatccatcgat 30799605  T
Q  99 tttgattgcgattttacaatt-----tcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt 169  Q
    |||||||||||||||  | ||     || | |||| |||||||||||||||||| || |||||||||||||| ||||    
T  30799606 tttgattgcgattttcgatttttctatcatatatcgattctacaaaagtagttgtgtaaaatccttcgatttcgatt 30799682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 15446311 - 15446429
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccatcc 96  Q
    |||| ||||| |||||||||||||||  || |||||| ||||| | | | ||||| ||| |  ||||||| | |||||||||||||| || ||||||||     
T  15446311 tgtacaagtaatttgtggactttaaactttgagtcatttatgagtgtgtgcaattgataacatatatttatcgttatttttgttttgatagaatccatcg 15446410  T
Q  97 attttgattgcgattttac 115  Q
    |||||||||||||||||||    
T  15446411 attttgattgcgattttac 15446429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 19979790 - 19979848
Alignment:
Q  69 attatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatc 128  Q
    |||||| || ||||||||||||||||| |||||||||| | |||||||||||||| ||||    
T  19979790 attattattattttggtaaaatccatcgattttgattgtg-ttttacaatttcttatatc 19979848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 84 - 123
Target Start/End: Complemental strand, 22645752 - 22645713
Alignment:
Q  84 gtaaaatccatccattttgattgcgattttacaatttctt 123  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  22645752 gtaaattccatctattttgattgcgattttacaatttctt 22645713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22984830 - 22984713
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||| ||| ||  || |||||| ||||||||||| ||||| ||| |  |||||||||||||||||  | |||||| ||||| ||     
T  22984830 tgtatatgtattttgtggaatttgaactttgagtcatctatgactatatgcaatttataacatatatttagcattattttactattggtagaatcc-tcg 22984732  T
Q  97 attttgattgcgattttac 115  Q
    ||||||||||  |||||||    
T  22984731 attttgattggaattttac 22984713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 8580 - 8796
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||||||   ||||||||||||||| ||||||||||||||||||||||||    
T  8580 taaactaagtcatttatgactatataccatttataccatatatttagtattattttt---ttggtaaaatccatcgattttgattgcgattttacaattt 8676  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |||| ||||||| ||| || |||||| ||||||||| |||||||||  |||||||||||| ||||||||  |||||||||| ||||||||||||||    
T  8677 cctatatcgattctacgaaaatacttgagtaaaatccttcaattttgattgcgattttacgagttccgattttgttattccctttcgacctgaagtaaag 8776  T
Q  218 ttccgattttgacaaccttg 237  Q
    | |||||||||| |||||||    
T  8777 tcccgattttgagaaccttg 8796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 8972 - 8803
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattt 100  Q
    |||||||||| ||||||  ||||| | |||||| ||||||||||||||| | ||| |||||  |||||||||| ||||||||||||||||||||| ||||    
T  8972 tataagtattgtgtggaaattaaactgagtcatttatgactatatacaacttataacatatatttagcattatctttgttttggtaaaatccatcgattt 8873  T
Q  101 tgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt 169  Q
    ||||||||||||||||| ||||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  8872 tgattgcgattttacaagttcttatatctattctacaaaagtagttgagtaaaatccttcgattttgatt 8803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 28745913 - 28746131
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||  |||| |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  28745913 taaactaagtcatttatgactatatactatttataacatatatttactattaatttt-tttgggtaaaatccatcgattttgattgcgattttacaattt 28746011  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |||| |||||||||||||  |||||| |||| ||||||||||||||  ||||||||||||||||||||| |||||  |||| ||||||||||||||    
T  28746012 cctatatcgattctacaaaagttcttgagtaaaattcttcgattttgattgcgattttacgagtcccgattttgctattttctttcgacctgaagtaaag 28746111  T
Q  218 ttccgattttgacaaccttg 237  Q
    | || |||||||||||||||    
T  28746112 tcccaattttgacaaccttg 28746131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 241
Target Start/End: Complemental strand, 24620137 - 24619967
Alignment:
Q  74 ttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg-- 170  Q
    |||| ||||||||||||||| | ||||||||||||||||||||||||  | |||| |||||||||||||  ||||||||| |||||||||||||||||      
T  24620137 tttttttttggtaaaatccaacaattttgattgcgattttacaattttctatatcgattctacaaaagtctttgagtaaaatccttcgattttgattgcg 24620038  T
Q  171 attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgattg 241  Q
    ||||||| |||||| ||||| ||||||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  24620037 attttacaagtcccaattttgctattcccttttgacttgaagtaaagttccgattttgacaaccttaattg 24619967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 72 - 237
Target Start/End: Original strand, 29067464 - 29067631
Alignment:
Q  72 atttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg 170  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||||| |||   |||||||||||||||| |  ||||||||| ||||||||||| |||||    
T  29067464 atttttttttgggtaaaatccatcgattttgattgcgattttacaacttccaatatcaattctacaaaaatccttgagtaaaatccttcgattt-gattg 29067562  T
Q  171 a--ttttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |  ||||| |||| |||||||| |||||||| || ||||||||||||||||||||||||||||||||||    
T  29067563 agattttatgagttccgattttgctattcccattcgacctgaagtaaagttccgattttgacaaccttg 29067631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 233
Target Start/End: Original strand, 27676551 - 27676787
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccat 98  Q
    ||||||||||||||||||| ||||||   |||||| |||||||||||| |||| ||| |||||  ||| |||| ||||||||||||||||||||||  ||    
T  27676551 tgtataagtattttgtgga-tttaaaccgagtcatttatgactatatataatttataacatatatttaacattgtttttgttttggtaaaatccattgat 27676649  T
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactat 195  Q
    |||||||| |||||||| ||||||| |||| ||| ||||||||||||||||| ||||| |||||||||||||  ||||||| || |  ||||||| || |    
T  27676650 tttgattgtgattttacgatttcttatatcgattttacaaaagtagttgagtaaaatctttcgattttgattgcgattttaagattttcgattttgctct 27676749  T
Q  196 tccctttagacctgaagtaaagttccgattttgacaac 233  Q
    ||||||| ||| ||||| ||| | | |||||| |||||    
T  27676750 tccctttcgacttgaagcaaaatcctgattttaacaac 27676787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 13286123 - 13286299
Alignment:
Q  64 ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgat 162  Q
    |||| ||||||||||||||||||||||||||| ||||| |||| |||||||| ||||||| |||| ||||||||||||||||||||| ||||| || |||    
T  13286123 ttagtattatttttgttttggtaaaatccatcgattttcattgtgattttacgatttcttatatcgattctacaaaagtagttgagtaaaatcttttgat 13286222  T
Q  163 tttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||  ||||||||||||   |||||| || |||||||  ||||||||| ||| ||  ||||||||||||||||    
T  13286223 tttgattgcgattttacgagttttgatttttctcttcccttccgacctgaagcaaaattgtgattttgacaaccttg 13286299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 25870275 - 25870096
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||  ||||||||| ||||||||    
T  25870275 atatttagtattattgtt-ttttggtaaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaacttagttgagtaaaatcctt 25870177  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
     ||||||| ||  |||||||||| |  |||||||||| ||| |||| ||||| ||| ||| |  |||||||||||||||||    
T  25870176 tgattttggttgcgattttacgattgtcgattttactcttctctttcgacctaaagcaaaatctcgattttgacaaccttg 25870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 17064483 - 17064661
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| ||| ||||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||  ||||||||||||||||||||| ||||||||    
T  17064483 atatttagtatttttttt-ttttggtaaaatccatcgattttgattgcaattttacaatttcttatattgattctacaaaagtagttgagtaaaatcctt 17064581  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||||||||||  |||||||||| |  |||||||  | ||  |||| ||||||||| ||| | || ||||||||||||||    
T  17064582 cgattttgattgcgattttacgattgtcgattttgatcttttctttcgacctgaagcaaaatcccaattttgacaacctt 17064661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 39428039 - 39428258
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| | | ||| |||||  |||| |||| |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  39428039 taaactaagtcatttatgactatatactacttataacatatatttagtattaattttttttgggtaaaatccatcgattttgattgcgattttacaattt 39428138  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattt----tgattg--attttacgagtcccgattttactattccctttagacctgaagt 213  Q
    | | |||| |||| |||||| |  ||||||||| |||||||||||    ||||||  |||||| ||||||||||||| |||||||||||  |||  ||||    
T  39428139 cctatatcgattccacaaaaatctttgagtaaaatccttcgatttattttgattgcgattttatgagtcccgattttgctattccctttcaaccgcaagt 39428238  T
Q  214 aaagttccgattttgacaac 233  Q
    ||||| ||||||||||||||    
T  39428239 aaagtcccgattttgacaac 39428258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 10872668 - 10872490
Alignment:
Q  61 tatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttc 159  Q
    |||||| |||||||||||||||||||||||||||| ||||| |||  |||||||| ||||||| |||| ||||| ||||||||||| ||| |||||||||    
T  10872668 tatttaacattatttttgttttggtaaaatccatcaatttttattctgattttacgatttcttatatcgattcttcaaaagtagtttagtaaaatccttc 10872569  T
Q  160 gattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
     |||||||||  ||||||| || |   |||||| || |||||||| ||||||||||||| | | |||||||||||||||    
T  10872568 aattttgattgcgattttatgatttttgatttttctcttcccttttgacctgaagtaaaatcctgattttgacaacctt 10872490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 63 - 238
Target Start/End: Original strand, 28135940 - 28136118
Alignment:
Q  63 tttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcga 161  Q
    |||| |||||||||||||||||||||||  ||  ||||||||| | ||||||||||||||| |||||||| ||||||||||||||||| |||||||||||    
T  28135940 tttaacattatttttgttttggtaaaatatattgattttgattcctattttacaatttcttatatcaattttacaaaagtagttgagtaaaatccttcga 28136039  T
Q  162 ttttgat--tgattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
    |||||||   |||||||||| || |||||||||| | || |||  || ||||||||| | |  ||||||||||||||||    
T  28136040 ttttgatagcgattttacgattctcgattttactctaccattttaacttgaagtaaaatcctaattttgacaaccttga 28136118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 3449262 - 3449084
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||||||  |||||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||| | ||||| ||    
T  3449262 atatttagtattattttt--tttggtaaaatccatcaattttgattgcgattttacattttcttatatcgattctacaaaagtagttgaataaaatcatt 3449165  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||| ||  |||||||||| |  ||||||| || ||| ||||  |||| ||| ||| | || |||||||||||||||    
T  3449164 cgattttggttgcgattttacgattgtcgattttgctcttctctttcaacctaaagcaaaatcccaattttgacaaccttg 3449084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 79 - 236
Target Start/End: Complemental strand, 22355997 - 22355841
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--atttt 175  Q
    ||||||||||||||||| |||||| ||||| |||||||||||    |||| ||| |||||||||  |||| |||| || || |||||||||||  |||||    
T  22355997 ttttggtaaaatccatcgattttgtttgcggttttacaattt----tatcgattttacaaaagtccttgaataaaatcttttgattttgattgcgatttt 22355902  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||||||||| ||||||| ||| ||||||| |||||||||||||||||| ||||||    
T  22355901 acgagtcccgattttgctattccatttcgacctgatgtaaagttccgattttgagaacctt 22355841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 64 - 170
Target Start/End: Complemental strand, 6136519 - 6136412
Alignment:
Q  64 ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgat 162  Q
    |||| ||||||||||||||||||||||||||| |||||||||| |||||||| ||||||| |||| |||||| |||||||||||||| ||||| || |||    
T  6136519 ttagtattatttttgttttggtaaaatccatcgattttgattgtgattttacgatttcttatatcgattctataaaagtagttgagtaaaatcttttgat 6136420  T
Q  163 tttgattg 170  Q
    ||||||||    
T  6136419 tttgattg 6136412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 8592421 - 8592173
Alignment:
Q  8 gtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttga 103  Q
    |||||||||||||||  ||  ||||||||| ||||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| |  |||||||    
T  8592421 gtattttgtggacttcgaactttaagtcatttatgactatatgcaatttataacatatatttatcattatttttgttttggtagaatccttg-attttga 8592323  T
Q  104 ttgcgattttacaa-------------tttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgat 187  Q
    |||||||||||| |             | || | |||| |||||||||||||  ||||||||| |||||||||||||||||  |||||||||||| ||||    
T  8592322 ttgcgattttacgagacccgattttgctatcctatatcgattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtctcgat 8592223  T
Q  188 tttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||| ||||| ||||| ||| ||||||||||| ||||||| ||||||||||    
T  8592222 tttgctatttcctttcgacttgaagtaaagtcccgatttcgacaaccttg 8592173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 60 - 190
Target Start/End: Original strand, 20756198 - 20756330
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| ||||||| | ||| ||||||||||||| ||||||||||||||||||||||||| | |||| ||||||||||| |  |||||| ||||| ||    
T  20756198 atatttagtattatttct-tttgggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaaatccttgagtaaaatcttt 20756296  T
Q  159 cgattttgatt--gattttacgagtcccgatttt 190  Q
    | |||||||||  |||||||||||||||||||||    
T  20756297 caattttgattgcgattttacgagtcccgatttt 20756330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 42696984 - 42697129
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  || | ||| ||||| ||||||||||||||||| ||||||||||||| ||||  ||||    
T  42696984 taaactaagtcatttatgactatataccatttataacatatatttggtatttttttttttttggtaaaatccatcgattttgattgcgagtttatgattt 42697083  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgatttt 165  Q
    ||| |||| ||||||||||||||||||| | ||||||||| |||||    
T  42697084 cttatatcgattctacaaaagtagttgaataaaatccttcaatttt 42697129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 239
Target Start/End: Complemental strand, 9152975 - 9152758
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttct 122  Q
    |||| ||||| || ||||||||||||  ||  ||||||||||||  |||||| |  ||||||||||||| ||| |||||||||| ||||||||||||||     
T  9152975 taaactaagttatttatgactatatatcatgtatagcatatttaatattattgtgtttttggtaaaatctatcgattttgattgtgattttacaatttca 9152876  T
Q  123 tgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagtt 219  Q
    |  ||| ||||||||||| ||||||||| ||||| |||||||||| ||  |||||||||| |   ||||||||| ||| |||| ||||| ||| ||| |     
T  9152875 t-aatcgattctacaaaaatagttgagtcaaatctttcgattttggttacgattttacgattgttgattttactcttctctttcgacct-aagcaaaatc 9152778  T
Q  220 ccgattttgacaaccttgat 239  Q
    | ||||||||||||||||||    
T  9152777 ctgattttgacaaccttgat 9152758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 153
Target Start/End: Original strand, 22137419 - 22137545
Alignment:
Q  28 taagtcatatatgactatatacaattaatagc-atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgta 126  Q
    |||||||| ||||||||||||| ||| ||| | |||||||| ||||||  | |||| |||||||||||| |||||||||  | |||||| ||||||| ||    
T  22137419 taagtcatttatgactatatactatttataactatatttagtattattaatttttttgtaaaatccatcaattttgattttggttttacgatttcttata 22137518  T
Q  127 tcaattctacaaaagtagttgagtaaa 153  Q
    || ||||||||||||||||||||||||    
T  22137519 tcgattctacaaaagtagttgagtaaa 22137545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 17796685 - 17796851
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagca--tatttagcattatttttgttttggtaaaatccatccattt 100  Q
    ||||||| ||||||| ||||||||  ||||||| ||| | ||||||||||| ||| ||  ||||| ||| ||||||| ||||||  | ||||||| ||||    
T  17796685 tataagtgttttgtgaactttaaaccaagtcatttattaatatatacaatttataacagttattttgcactatttttattttgg--acatccatcaattt 17796782  T
Q  101 tgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||| ||||||||| |||||||  ||| ||||||||||||||||||||| |||| |||||||||| ||||    
T  17796783 tgatttcgattttacgatttctt--atcgattctacaaaagtagttgagtaaaatgcttcgattttaattg 17796851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 170
Target Start/End: Original strand, 19105125 - 19105291
Alignment:
Q  3 tataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagca--tatttagcattatttttgttttggtaaaatccatccattt 100  Q
    ||||||| ||||||| ||||||||  ||||||| ||| | ||||||||||| ||| ||  ||||| ||| ||||||| ||||||  | ||||||| ||||    
T  19105125 tataagtgttttgtgaactttaaaccaagtcatttattaatatatacaatttataacagttattttgcactatttttattttgg--acatccatcaattt 19105222  T
Q  101 tgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg 170  Q
    ||||| ||||||||| |||||||  ||| ||||||||||||||||||||| |||| |||||||||| ||||    
T  19105223 tgatttcgattttacgatttctt--atcgattctacaaaagtagttgagtaaaatgcttcgattttaattg 19105291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 22971050 - 22971163
Alignment:
Q  126 atcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccg 222  Q
    |||||||||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||| |||| || ||||||||||| ||     
T  22971050 atcaattctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactcctttta-acttgaagtaaagtccca 22971148  T
Q  223 attttgacaaccttg 237  Q
    ||||||| |||||||    
T  22971149 attttgataaccttg 22971163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 19348654 - 19348770
Alignment:
Q  1 tgtataagtattttgtggactttaaatta-agtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| ||||| |||||||||| ||||| |||||| ||||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || |    
T  19348654 tgtatatgtattatgtggactttgaattatagtcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtataatcc-tcga 19348752  T
Q  98 ttttgattgcgattttac 115  Q
    ||||||||||||||||||    
T  19348753 ttttgattgcgattttac 19348770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 79 - 162
Target Start/End: Complemental strand, 8156063 - 8155980
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgat 162  Q
    ||||||||||||||| | || ||||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||||||||||    
T  8156063 ttttggtaaaatcca-cgatattgattgcgattttacagtttcttatatcaatgctacaaaagtagttgagtaaaatccttcgat 8155980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 3041469 - 3041570
Alignment:
Q  131 ttctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgatttt 227  Q
    ||||||||||||  ||||||||| |||||||||||||||||  |||||||||||||||||||| ||| ||| ||| ||| ||||||||| | ||||||||    
T  3041469 ttctacaaaagtccttgagtaaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaaatcccgatttt 3041568  T
Q  228 ga 229  Q
    ||    
T  3041569 ga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 172 - 238
Target Start/End: Complemental strand, 24649588 - 24649522
Alignment:
Q  172 ttttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
    ||||||||||||| ||||| ||||||||||| ||||||||||||||| || ||||||||||||||||    
T  24649588 ttttacgagtcccaattttgctattccctttcgacctgaagtaaagtcccaattttgacaaccttga 24649522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 6861123 - 6861039
Alignment:
Q  32 tcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgatttta 114  Q
    |||| |||||||||| |||||| ||| |||||  ||||| ||||||||||||||||| |||||||| ||||||||||||||||||    
T  6861123 tcatttatgactatagacaatttataacatatagttagctttatttttgttttggtagaatccatcgattttgattgcgatttta 6861039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 8560319 - 8560231
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||||||||||||  |||| ||||||| ||||||| ||| ||||||| ||| ||||||||||| |||||||||| |||||||    
T  8560319 aaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttgacttgaagtaaagtcccgattttgataaccttg 8560231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 157 - 239
Target Start/End: Complemental strand, 20766757 - 20766673
Alignment:
Q  157 ttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
    ||||||||||||||  |||||||||||| ||||||| ||| || |||| ||  ||||||||||| ||||||||||||||||||||    
T  20766757 ttcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagtaaagtcccgattttgacaaccttgat 20766673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 41671426 - 41671534
Alignment:
Q  132 tctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttg 228  Q
    |||||||||||||||||||||| ||||||||||||| |||  ||||||| | |  ||||||| || ||| |||| ||||||||| ||| | |||||||||    
T  41671426 tctacaaaagtagttgagtaaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaatcccgattttg 41671525  T
Q  229 acaaccttg 237  Q
    |||||||||    
T  41671526 acaaccttg 41671534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 15515248 - 15515106
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| |||||||||   ||||||||||||||  ||||| |||   ||||||||||||    
T  15515248 taaactaagtcatttatgactatataccatttataacatatatttagtattattttt---ttggtaaaatccatggatttttattataattttacaattt 15515152  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgatttt 165  Q
    ||| ||   |||||| |||||||||||||| |||| ||||||||||    
T  15515151 cttctaatgattctataaaagtagttgagtaaaatacttcgatttt 15515106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 18014258 - 18014345
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||||||||||||||  |||||||||||||| ||||| ||| ||| |||  || ||||||||||| |||||||||| ||||||    
T  18014258 aaatccttcgattttgattgcgattttacgagtcccaattttgctactccattttaacttgaagtaaagtcccgattttgataacctt 18014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 18014094 - 18014208
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||||||||||| || || |||||| |||||||||   ||||| ||| |||||  |||||||||||||||||||| || ||||| || |    
T  18014094 tgtatatgtattttgtggactttgaactttagtcatttatgactatg--caatttataacatatatttagcattatttttgttttgatagaatcc-tcga 18014190  T
Q  98 ttttgattgcgattttac 115  Q
    ||||||||||||||||||    
T  18014191 ttttgattgcgattttac 18014208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 21553781 - 21553671
Alignment:
Q  125 tatcaattctacaaaagtagttgagtaaat--ccttcgattttgattgattttacgagtcccgattttactattccctttagacctgaagtaaagttccg 222  Q
    ||||||||||||||||||  |||| ||||   ||||||||||||||||   |||| |||||||||||| ||| ||||||| ||  ||||||||||| |||    
T  21553781 tatcaattctacaaaagtccttgaataaaaaaccttcgattttgattgcgattaccagtcccgatttttctactccctttcgatttgaagtaaagtcccg 21553682  T
Q  223 attttgacaac 233  Q
    ||||| |||||    
T  21553681 atttttacaac 21553671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 15806337 - 15806286
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgatt 111  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||||| |||||    
T  15806337 atatttagcattatttttgttttggtagaatccatcaattctgattacgatt 15806286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 19348820 - 19348906
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacct 235  Q
    ||||||||| ||||||||||  |||||||||||| ||||||| ||| ||||||| ||| |||||||||||  | ||||||| |||||    
T  19348820 aaatccttccattttgattgcgattttacgagtctcgattttgctactcccttttgacttgaagtaaagtctcaattttgataacct 19348906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 22970909 - 22971026
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatat-atgactatatacaattaatagcatatttag--cattatttttgttttggtaaaatccatcc 96  Q
    |||||| |||||||||||||||| || || |||||| | |||||||||| ||||| ||| ||||| ||   ||||||||||||||||||| ||||| ||     
T  22970909 tgtatatgtattttgtggactttgaactttagtcattttatgactatatgcaatttataacatatatataacattatttttgttttggtagaatcc-tcg 22971007  T
Q  97 attttgattgcgattttac 115  Q
    ||||||||||| |||||||    
T  22971008 attttgattgcaattttac 22971026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 9169806 - 9169890
Alignment:
Q  32 tcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    |||| ||||||||||| ||||| ||| |||||  ||| ||||||||||||||||||| ||||| || ||||||||||| |||||||    
T  9169806 tcatttatgactatatgcaatttataacatatatttaacattatttttgttttggtagaatcc-tcgattttgattgcaattttac 9169890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 158 - 229
Target Start/End: Original strand, 9169869 - 9169942
Alignment:
Q  158 tcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttga 229  Q
    |||||||||||||  |||||||| ||||| ||||| ||| | ||||| ||| ||||||||||||||||||||||    
T  9169869 tcgattttgattgcaattttacgggtcccaattttgctacttcctttcgacttgaagtaaagttccgattttga 9169942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 10591808 - 10591861
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgatttta 114  Q
    ||||||||||||||||||||||||||| ||||| || ||||||||||| ||||||    
T  10591808 atatttagcattatttttgttttggtagaatcc-tcaattttgattgcaatttta 10591861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 21963625 - 21963699
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    |||| |||||||||||| |||||||||  | |||||| ||||||| |||| |||||| ||||||| |||||||||    
T  21963625 tttttgtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaa 21963699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 79 - 153
Target Start/End: Original strand, 21986061 - 21986135
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    |||| |||||||||||| |||||||||  | |||||| ||||||| |||| |||||| ||||||| |||||||||    
T  21986061 tttttgtaaaatccatcaattttgattctggttttacgatttcttatatcgattctataaaagtaattgagtaaa 21986135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 232
Target Start/End: Original strand, 27055381 - 27055443
Alignment:
Q  170 gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaa 232  Q
    |||||||||| |  ||||||||||||| |||||  |||||||||||| |||||||||||||||    
T  27055381 gattttacgatttgcgattttactatttcctttttacctgaagtaaaattccgattttgacaa 27055443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 22494723 - 22494679
Alignment:
Q  73 tttttgttttggtaaaatccatccattttgattgcgattttacaa 117  Q
    ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  22494723 tttttttttgggtaaaatccatctattttgattgcgattttacaa 22494679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 3041386 - 3041440
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    ||||||| ||||||||||||||||||| ||||| || ||||| |||||||||||||    
T  3041386 atatttaacattatttttgttttggtagaatcc-tcgattttaattgcgattttac 3041440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 6861037 - 6860986
Alignment:
Q  185 gattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||||||||||||||||| ||||||||| ||| | || ||||||||||||||    
T  6861037 gattttactattccctttcgacctgaagcaaaatcccaattttgacaacctt 6860986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 21553850 - 21553804
Alignment:
Q  68 cattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||    
T  21553850 cattatttttgttttggtagaatcc-tcgattttgattgcgattttac 21553804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 63
Target Start/End: Complemental strand, 10872875 - 10872817
Alignment:
Q  5 taagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatat 63  Q
    |||||||||||||||||||||| || ||||| |||||| | |||||||| ||| |||||    
T  10872875 taagtattttgtggactttaaactatgtcatttatgacaaaatacaatttataacatat 10872817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 86 - 123
Target Start/End: Complemental strand, 8156161 - 8156124
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| ||||||||||||||||||| |||||||    
T  8156161 aaaatccatcgattttgattgcgattttacgatttctt 8156124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 26208228 - 26208285
Alignment:
Q  63 tttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||||| ||||| || |||||||| ||||| |||||||||||| |||||    
T  26208228 tttaacattatttttattttgatagaatccatcaattttaattgcgattttagaattt 26208285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 216
Target Start/End: Complemental strand, 30727714 - 30727654
Alignment:
Q  158 tcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaa 216  Q
    |||||||||||||  |||||| ||||| ||||||| |||||||||||  ||||||||||||    
T  30727714 tcgattttgattgcgattttaggagtctcgattttgctattccctttcaacctgaagtaaa 30727654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 56379 - 56199
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| ||| ||||| | ||||||||||||||| ||||||||||||||||||||||||| | |||| |||||||||||||  |||||| ||||||||    
T  56379 atatttagtattttttttttgttggtaaaatccatcgattttgattgcgattttacaatttcctatatcgattctacaaaagtccttgagtaaaatcctt 56280  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||||||  |||||||   ||| ||||||| ||||||||||| |||||||||||||||  |||||||||||||||||    
T  56279 cgattttgattgcgattttagatgtctcgattttgctattccctttcgacctgaagtaaagtctcgattttgacaaccttg 56199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 11879737 - 11879955
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| ||||| || ||||||||||||| ||| ||| |||||  |||| |||||| || ||||||||||||||||| ||||||| ||||||||||||||||    
T  11879737 taaactaagtaatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaaatccatcgattttgaatgcgattttacaattt 11879835  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
      | |||| |||||| ||||||  ||  ||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||     
T  11879836 tctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaa 11879935  T
Q  218 ttccgattttgacaaccttg 237  Q
    | ||||||||||||||||||    
T  11879936 tcccgattttgacaaccttg 11879955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 237
Target Start/End: Original strand, 11897153 - 11897371
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| ||||| || ||||||||||||| ||| ||| |||||  |||| |||||| || ||||||||||||||||| ||||||| ||||||||||||||||    
T  11897153 taaactaagtaatttatgactatataccatttataacatatatttagtattattatt-ttttggtaaaatccatcgattttgaatgcgattttacaattt 11897251  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
      | |||| |||||| ||||||  ||  ||||| |||||||||||||||||  ||||||||||| |||||||||||||||||||| |||||||||||||     
T  11897252 tctatatcgattctataaaagttcttaggtaaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaa 11897351  T
Q  218 ttccgattttgacaaccttg 237  Q
    | ||||||||||||||||||    
T  11897352 tcccgattttgacaaccttg 11897371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 73 - 238
Target Start/End: Complemental strand, 29384253 - 29384085
Alignment:
Q  73 tttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt-- 169  Q
    ||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||||| ||      
T  29384253 ttttttttttggtaaaatccatcgattttgattgcgattttacgatttcttatattaattctacaaaagtagttgagtaaaatccttcgattttggttgc 29384154  T
Q  170 gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttga 238  Q
    |||||||||| |  ||||||| || ||  |||| ||||||||| ||| | |||||||||||||||||||    
T  29384153 gattttacgattgtcgatttttctcttttctttcgacctgaagcaaaatcccgattttgacaaccttga 29384085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 15761375 - 15761130
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgact--atatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcc 96  Q
    ||||||| ||||||||| | |||||| | | |||| |||||||  |||||||||| ||| |||||  ||||||||||||||||||||||||||||||||     
T  15761375 tgtataactattttgtgaattttaaacttactcatttatgactctatatacaatttataacatatatttagcattatttttgttttggtaaaatccatcg 15761276  T
Q  97 attttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttact 193  Q
    ||||||||||||||||||| | ||||| |||| |||||||||||||| |||||| ||||||||||||||  |||  |||||||||| || | |||| | |    
T  15761275 attttgattgcgattttactacttcttatatcgattctacaaaagtaattgagtaaaatccttcgatttatattgcgattttacgattctcaatttcatt 15761176  T
Q  194 attccctttagacctgaagtaaagttccgattttgacaaccttgat 239  Q
     |||||||| | | ||||| ||| | || ||||| |||||||||||    
T  15761175 cttccctttcggcttgaagcaaaatcccaattttaacaaccttgat 15761130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 60 - 232
Target Start/End: Original strand, 45403205 - 45403379
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tcctt 158  Q
    |||||||  |||||| || ||||||||||||| ||| |||||||||||| |||||||||||| | |||| |||||||||||||  || |||||| |||||    
T  45403205 atatttaatattattatttttttggtaaaatctatcgattttgattgcg-ttttacaatttcctatatcgattctacaaaagtctttaagtaaaatcctt 45403303  T
Q  159 cgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaa 232  Q
    ||||||||||||  |||||||||||| ||||||| ||||||||||| ||| |||| |||||| |||||||||||||    
T  45403304 cgattttgattgcgattttacgagtctcgattttgctattccctttcgacgtgaaataaagtcccgattttgacaa 45403379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 23 - 234
Target Start/End: Original strand, 5922186 - 5922400
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||| ||||| ||||||||||||| ||| ||| |||||  |||| ||||  ||| ||| ||||||||||||| |||  |||||||||||||||||||    
T  5922186 taaattaggtcatttatgactatataccattcataacatatatttagtattaaattt-tttgggtaaaatccatcgatta-gattgcgattttacaattt 5922283  T
Q  121 cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    | | |||| |||||||||||||  ||||||||| |||||||||||||||||  ||| |||  || | |||||| ||||||||||| ||||||||||||||    
T  5922284 cctatatcgattctacaaaagttcttgagtaaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctgaagtaaag 5922383  T
Q  218 ttccgattttgacaacc 234  Q
    | |||||||||||||||    
T  5922384 tcccgattttgacaacc 5922400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 237
Target Start/End: Complemental strand, 7489275 - 7489057
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||| ||||||||||||  ||| ||| |||||  |||| |||| | || |||  ||||||| |||| ||||||||||||||||||||||||    
T  7489275 taaattaagtcatttatgactatatatcatttataacatatatttagtattaatatt-tttgagtaaaattcatcgattttgattgcgattttacaattt 7489177  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
      | |||| |||||||||||||  |||||| ||||||| |||||||||||  ||||||||||||||  ||||| ||||| ||||| ||| ||||||||||    
T  7489176 tctatatcgattctacaaaagtccttgagtaaaatcctccgattttgattgcgattttacgagtcctaattttgctatttcctttcgacttgaagtaaag 7489077  T
Q  218 ttccgattttgacaaccttg 237  Q
    | | ||||||||||||||||    
T  7489076 tcctgattttgacaaccttg 7489057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 236
Target Start/End: Original strand, 23142312 - 23142528
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||||| ||||||||||||| ||| ||| |||||  |||| |||||| ||  ||||||||| |||||| ||||||||||||||||||||||||    
T  23142312 taaattaagtcatttatgactatataccatttataacatatatttagtattattatt--tttggtaaagtccatcgattttgattgcgattttacaattt 23142409  T
Q  121 cttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaag 217  Q
    ||| |||| |||||||||||||  |||| | ||||| ||||||||  |||  |||||||||| | ||| |||| ||||||||||| ||  |||| |||||    
T  23142410 cttatatcgattctacaaaagtttttgactaaaatcattcgatttaaattgcgattttacgattaccggttttgctattccctttcgaattgaaataaag 23142509  T
Q  218 ttccgattttgacaacctt 236  Q
    | | |||||||||||||||    
T  23142510 tcctgattttgacaacctt 23142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 237
Target Start/End: Original strand, 6810997 - 6811174
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||||||  |||||||||||||||| ||||||||||||||||| ||||||||| |||| ||||||||||||||||||| | |||| |||    
T  6810997 atatttagtattattttt--tttggtaaaatccatcgattttgattgcgatttt-caatttcttatatctattctacaaaagtagttgattaaaattctt 6811093  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    |||||||| ||  |||||||||| |  ||||||| || ||| |||| ||  ||||  ||||||||||||||||||||||||    
T  6811094 cgattttggttgcgattttacgattgtcgattttgctcttctctttcgatttgaaacaaagttccgattttgacaaccttg 6811174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 17647191 - 17647351
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gatttt 175  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||||||||||  ||||||    
T  17647191 ttttgataaaatccatcgattttgattgcgattttacaatttcttatatcgattctacaaaactagttgagtaaaatccttcgattttgattgcgatttt 17647290  T
Q  176 acgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    | || |  ||||||| ||  || |||| ||||||||| ||| | |||||||| ||||||||    
T  17647291 atgattgtcgattttgctcatctctttcgacctgaagcaaaatcccgattttaacaacctt 17647351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 237
Target Start/End: Original strand, 17566230 - 17566453
Alignment:
Q  7 agtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatatttagcattattttt-gttttggtaaaatccatccattttgatt 105  Q
    ||||||||||| |||||||| |||| |||  |||||||||||||||| |||     ||||||||| ||||| |||||||||||||||||      |||||    
T  17566230 agtattttgtgaactttaaactaagccattaatgactatatacaatttata-----tttagcatttttttttgttttggtaaaatccat------tgatt 17566318  T
Q  106 gcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg--attttacgagtcccgattttactattcccttt 202  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||| |||||||||||||||  ||||||||| |  | ||||| || ||||||||    
T  17566319 gcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttt 17566418  T
Q  203 agacctgaagtaaagttccgattttgacaaccttg 237  Q
     ||||||||| ||| | | |||||| | |||||||    
T  17566419 tgacctgaagcaaaatcctgattttaaaaaccttg 17566453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 8582218 - 8582311
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    ||||||| |||||||| |||||||||||||| |||| ||||||||||  ||||||| ||||||| |||||||||||||||||||||||||||||    
T  8582218 atatttaacattatttatgttttggtaaaattcatcgattttgattgtaattttacgatttcttatatcaattctacaaaagtagttgagtaaa 8582311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 99 - 236
Target Start/End: Complemental strand, 24414202 - 24414062
Alignment:
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactat 195  Q
    |||||||  |||||||||||||| | |||| ||||||||||| |  ||||||||| |||||||||||||||||  ||||||||||||   ||||| ||||    
T  24414202 tttgattaggattttacaatttcctatatcgattctacaaaaattcttgagtaaaatccttcgattttgattgcgattttacgagtctaaattttgctat 24414103  T
Q  196 tccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||| ||| |||||||||||||| ||||||||||||||    
T  24414102 tccctttcgacatgaagtaaagttccaattttgacaacctt 24414062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 73 - 216
Target Start/End: Complemental strand, 19704398 - 19704252
Alignment:
Q  73 tttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaat-ccttcgattttgattg- 170  Q
    ||||| ||| ||||||||||||| |||||||||| |||||||  |||||   |||| ||||||||| |||  |||||||||| |||| |||||||||||     
T  19704398 tttttttttaggtaaaatccatcgattttgattgtgattttaagatttcaaatatcgattctacaacagtccttgagtaaattcctttgattttgattgc 19704299  T
Q  171 -attttacgagtcccgattttactattccctttagacctgaagtaaa 216  Q
     |||||||||||||||||||| ||||||||||| ||| |||||||||    
T  19704298 gattttacgagtcccgattttgctattccctttggacttgaagtaaa 19704252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 169
Target Start/End: Complemental strand, 24056523 - 24056414
Alignment:
Q  61 tatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttc 159  Q
    |||||| |||||||||||||||| ||||||| ||| ||| ||||||||||||||  |||| || |||  ||||||||||| ||||||||| |||||||||    
T  24056523 tatttaacattatttttgttttgataaaatctatcgattatgattgcgattttaacatttgttatattgattctacaaaactagttgagtaaaatccttc 24056424  T
Q  160 gattttgatt 169  Q
    ||||||||||    
T  24056423 gattttgatt 24056414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 15294846 - 15294978
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||||||  || ||||||||||||  |||||| |||||||||||  ||||||| |||  |||||||||||||  |||||| ||||||||    
T  15294846 atatttagtattattttt--ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatcctt 15294943  T
Q  159 cgattttgatt--gattttacgagtcccgatttta 191  Q
    |||||||||||  ||||||| ||||||||||||||    
T  15294944 cgattttgattgcgattttaggagtcccgatttta 15294978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 60 - 191
Target Start/End: Original strand, 15475215 - 15475347
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||||||  || ||||||||||||  |||||| |||||||||||  ||||||| |||  |||||||||||||  |||||| ||||||||    
T  15475215 atatttagtattattttt--ttaggtaaaatccatggattttgcttgcgattttaagatttcttatatggattctacaaaagttcttgagtaaaatcctt 15475312  T
Q  159 cgattttgatt--gattttacgagtcccgatttta 191  Q
    |||||||||||  ||||||| ||||||||||||||    
T  15475313 cgattttgattgcgattttaggagtcccgatttta 15475347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1018196 - 1018060
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagcata--tttagcattatttttgttttggtaaaatccatccat 98  Q
    |||||||||||||||| ||||||||| |  ||||| |||||||||||| |||| ||| ||||  |||| |||||||||| |||||||| |||| ||| ||    
T  1018196 tgtataagtattttgttgactttaaagtgggtcatttatgactatatataatttataacatacatttaacattatttttattttggtagaatctatcgat 1018097  T
Q  99 tttgattgcgattttacaatttcttgtatcaattcta 135  Q
    |||||||||| |||| | || |||| |||| ||||||    
T  1018096 tttgattgcgcttttgcgatatcttatatcgattcta 1018060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 26575140 - 26575017
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagcatattt--agcattatttttgttttggtaaaatccatcc 96  Q
    ||||||||||||||||||||||||||  || |||||| ||||| ||||| ||||| | | |||||||  ||||| | ||||||||||||| ||||||||     
T  26575140 tgtataagtattttgtggactttaaactttgagtcatttatgattatattcaatttaaaacatatttttagcatcaattttgttttggtagaatccatcg 26575041  T
Q  97 attttgattgcgattttacaattt 120  Q
    ||||||||||| ||||||| ||||    
T  26575040 attttgattgctattttacgattt 26575017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 16752264 - 16752370
Alignment:
Q  126 atcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccg 222  Q
    ||||||||||||||| |  ||||||||| ||||||||||||| |||  |||||||||||||| ||||| ||| ||||||| ||| ||||||||||||||     
T  16752264 atcaattctacaaaattccttgagtaaaatccttcgattttgtttgcgattttacgagtcccaattttgctactccctttcgacttgaagtaaagttcca 16752363  T
Q  223 attttga 229  Q
    |||||||    
T  16752364 attttga 16752370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 236
Target Start/End: Original strand, 31424355 - 31424518
Alignment:
Q  73 tttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg- 170  Q
    ||||| |||| |||||||| ||| |||| |||||| ||||||| ||||||| ||||||||| |||| |||||||||||||| ||||    |||||||||     
T  31424355 tttttttttttgtaaaatctatcgatttggattgcaattttactatttcttatatcaattccacaagagtagttgagtaaaatcctg---ttttgattgc 31424451  T
Q  171 -attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
     ||||||||| |  ||||||| ||  || |||| ||||||||||||| |  ||||||||||||||||    
T  31424452 gattttacgattgtcgattttgctcatctctttcgacctgaagtaaaatctcgattttgacaacctt 31424518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 30240324 - 30240264
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||||||||||| ||||    
T  30240324 atatttagtattatttttgttttggtagaatccatcaattttgattgcgattttacgattt 30240264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 242
Target Start/End: Complemental strand, 22910118 - 22909973
Alignment:
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtcccgattttactat 195  Q
    ||||||||||||||||| ||||||| |||| ||||||||||| ||||||| | ||||||||| |||| | ||  |||||||||| |  ||||||| || |    
T  22910118 tttgattgcgattttacgatttcttatatcgattctacaaaaatagttgaataaaatccttcaatttcggttgcgattttacgattgtcgatttttctct 22910019  T
Q  196 tccctttagacctgaagtaaagttccgattttgacaaccttgattga 242  Q
    || |||| ||| ||| |||||  ||||||||||||||||||| ||||    
T  22910018 tctctttcgacatgatgtaaa-atccgattttgacaaccttggttga 22909973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 153
Target Start/End: Original strand, 15231835 - 15231889
Alignment:
Q  99 tttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagtaaa 153  Q
    |||||||||||||||||||||| || |||| ||||||||||||||||||||||||    
T  15231835 tttgattgcgattttacaattttttatatcgattctacaaaagtagttgagtaaa 15231889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 227
Target Start/End: Original strand, 2040364 - 2040464
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||   |||||||| |||||||||||||||||  ||||||||||| |||||||| ||| || |||| ||| ||||||||||| |||||||    
T  2040364 attctacaaaagtccatgagtaaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcgacttgaagtaaagtcccgattt 2040463  T
Q  227 t 227  Q
    |    
T  2040464 t 2040464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 23 - 165
Target Start/End: Complemental strand, 3094235 - 3094092
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcga-ttttacaatt 119  Q
    |||| |||||||| ||||||||||||| ||| ||| |||||  |||| ||| ||||| |||| |||||||| ||| ||||||||||||| ||||||||||    
T  3094235 taaactaagtcatttatgactatataccatttataacatatatttagtattttttttttttttgtaaaatctatcaattttgattgcgatttttacaatt 3094136  T
Q  120 tcttgtatcaattctacaaaagtagttgagt-aaatccttcgatttt 165  Q
    |||| |||     ||||||||||| |||||| ||||||||| |||||    
T  3094135 tcttatat---gcctacaaaagtaattgagtaaaatccttcaatttt 3094092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 237
Target Start/End: Complemental strand, 40541682 - 40541594
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||| ||| ||||||||||  |||||||||||||||||||| ||| | ||||| ||| ||||||||||| |||||||||| |||||||    
T  40541682 aaatctttcaattttgattgcgattttacgagtcccgattttgctacttcctttcgacttgaagtaaagtcccgattttgataaccttg 40541594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 85 - 189
Target Start/End: Original strand, 32424534 - 32424641
Alignment:
Q  85 taaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagt 181  Q
    ||||||| ||| ||||| ||||||||||||||||||| | | || ||||||||||| |  |||||| ||||||||||||||| |||  ||||||||||||    
T  32424534 taaaatctatcgatttttattgcgattttacaatttcctatctcgattctacaaaactccttgagtaaaatccttcgattttaattgcgattttacgagt 32424633  T
Q  182 cccgattt 189  Q
     |||||||    
T  32424634 tccgattt 32424641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 27836456 - 27836357
Alignment:
Q  23 taaattaagtcatatatgactatatacaattaatagcat--atttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||| |||||||| ||||||||||||| ||| ||| |||  |||||| ||| ||||| |  |||||||||||||| |||||||||| |||||||||||||    
T  27836456 taaactaagtcatttatgactatataccatttataacatgtatttagtatttttttt-tgctggtaaaatccatcgattttgattgtgattttacaattt 27836358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 2040282 - 2040336
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    ||||||| ||||||||||||||||||| ||||| || |||||||||||||||||||    
T  2040282 atatttaacattatttttgttttggtagaatcc-tcgattttgattgcgattttac 2040336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 15294768 - 15294805
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15294768 aaaatccatcgattttgattgcgattttacaatttctt 15294805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 15475137 - 15475174
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttctt 123  Q
    |||||||||| |||||||||||||||||||||||||||    
T  15475137 aaaatccatcgattttgattgcgattttacaatttctt 15475174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 26879749 - 26879810
Alignment:
Q  60 atatttagcattattttt-gttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    ||||||||||| |||||| ||||| ||| |||||||| ||||||||||||||||||| ||||    
T  26879749 atatttagcatgattttttgtttttgtagaatccatcaattttgattgcgattttacgattt 26879810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 19335243 - 19335329
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    |||||| |||||||||||||  ||| || |||| || ||||||||||| | ||| ||||| ||||||||| |||||||||||||||||    
T  19335243 aaatccatcgattttgattgtgattgta-gagttccaattttactatttctttttgacctaaagtaaagtcccgattttgacaacctt 19335329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 7262007 - 7262070
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgatttt 190  Q
    |||||||||||||  ||||||||| |||||  ||||||||||  ||||||||||||||||||||    
T  7262007 attctacaaaagtccttgagtaaaatcctttaattttgattgcgattttacgagtcccgatttt 7262070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 237
Target Start/End: Original strand, 802 - 1025
Alignment:
Q  7 agtattttgtggactttaaattaagtcatatatgactatatacaattaatagcatatttagcattattttt-gttttggtaaaatccatccattttgatt 105  Q
    ||||||||||| |||||||| |||| |||  |||||||||||||||| |||     ||||||||| ||||| |||||||||||||||||      |||||    
T  802 agtattttgtgaactttaaactaagccattaatgactatatacaatttata-----tttagcatttttttttgttttggtaaaatccat------tgatt 890  T
Q  106 gcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgattg--attttacgagtcccgattttactattcccttt 202  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||| |||||||||||||||  ||||||||| |  | ||||| || ||||||||    
T  891 gcgattttacaatttcttatatctgttctacaaaagtagttgagtaaaattcttcgattttgattgcaattttacgattttcaattttgctcttcccttt 990  T
Q  203 agacctgaagtaaagttccgattttgacaaccttg 237  Q
     ||||||||| ||| | | |||||| | |||||||    
T  991 tgacctgaagcaaaatcctgattttaaaaaccttg 1025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 60 - 198
Target Start/End: Complemental strand, 7408 - 7268
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    |||||||| |||||| || |||||||||||| |||| ||||||||||||||| ||||||||| | |||| |||| ||||||||| |||||| ||||||||    
T  7408 atatttagtattattgtt-ttttggtaaaattcatcgattttgattgcgattatacaatttcctatatctattcaacaaaagtacttgagtaaaatcctt 7310  T
Q  159 cgattttgatt--gattttacgagtcccgattttactattcc 198  Q
    |||||||||||  |||||||| |||| ||||||| |||||||    
T  7309 cgattttgattacgattttacaagtctcgattttgctattcc 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 62; Significance: 8e-27; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 169
Target Start/End: Complemental strand, 93700 - 93549
Alignment:
Q  21 tttaaattaagtcatatatgacta-tatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaa 117  Q
    ||||||||||||| | |||||||| ||||| ||| ||| |||||  |||| | ||||| | ||||||||||||||||| ||||||||||||||||||| |    
T  93700 tttaaattaagtcgtttatgactaatatacgattcataacatatatttagtaatatttgt-ttttggtaaaatccatcgattttgattgcgattttacga 93602  T
Q  118 tttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt 169  Q
    ||| || |||| ||||||||||||||||||| | |||||||||||||||||||    
T  93601 tttattatatcgattctacaaaagtagttgaataaaatccttcgattttgatt 93549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 87 - 123
Target Start/End: Complemental strand, 93736 - 93700
Alignment:
Q  87 aaatccatccattttgattgcgattttacaatttctt 123  Q
    ||||||||| ||||||||||||||||||| |||||||    
T  93736 aaatccatcgattttgattgcgattttacgatttctt 93700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 171
Target Start/End: Complemental strand, 48616 - 48504
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    ||||||| |||||||||||||| | |||| |||||| |||||||| |||||||||| | ||||| |||| ||||||||||||||||| ||| ||||||||    
T  48616 atatttaacattatttttgtttggataaagtccatcgattttgatcgcgattttacgacttcttttatcgattctacaaaagtagttaagtaaaatcctt 48517  T
Q  159 cgattttgattga 171  Q
    |||||||||||||    
T  48516 cgattttgattga 48504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 61268 - 61089
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatcctt 158  Q
    ||||||| |||||||||||||||  |||| |||||| |||||| || ||||||||| ||||| | |||| ||||||||||||||||| ||| |||| |||    
T  61268 atatttaacattatttttgttttaataaagtccatcgattttggttacgattttacgatttcatatatcgattctacaaaagtagttaagtaaaattctt 61169  T
Q  159 cgattttgat--tgattttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||||  ||||||||||| |    |||||||| ||| |||| ||||||||| ||| | ||||||||| |||||||    
T  61168 cgattttgattgtgattttacgattttaaattttacttttctcttttgacctgaagcaaaatcccgattttggcaacctt 61089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 131 - 3
Alignment:
Q  86 aaaatccatccattttgattgcgattttacaatttcttgtatcaattctacaaaagtagttgagt-aaatccttcgattttgatt--gattttacgagtc 182  Q
    |||||||||| |||||||||| |||||||||||||||| |||| ||||||| ||||||||||||| |||||||||||||||| ||  |||||||||| |     
T  131 aaaatccatcgattttgattgagattttacaatttcttatatcgattctac-aaagtagttgagtaaaatccttcgattttggtttcgattttacgattg 33  T
Q  183 ccgattttactattccctttagacctgaag 212  Q
     ||||||| || ||| | || |||||||||    
T  32 tcgattttgctcttctcattcgacctgaag 3  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 14810 - 14700
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||  |||| |||| |||||||||||||||||  |||||||||||||||||||| ||| ||| ||| ||| ||||||||||  |||||||    
T  14810 attctacaaaagtctttgaataaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaagccccgattt 14711  T
Q  227 tgacaaccttg 237  Q
    ||| |||||||    
T  14710 tgataaccttg 14700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 14884 - 14838
Alignment:
Q  68 cattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    ||||||||||||||||||| ||||| || |||||||||||||||||||    
T  14884 cattatttttgttttggtagaatcc-tcgattttgattgcgattttac 14838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 38410 - 38301
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||   |||||||| ||||||||| | |||||  |||||||||||||||||||| ||||| ||||| ||| ||||||||||| |||||||    
T  38410 attctacaaaagtccatgagtaaaatccttcgatct-gattgcaattttacgagtcccgattttgctatttcctttcgacttgaagtaaagtcccgattt 38312  T
Q  227 tgacaaccttg 237  Q
    |||||||||||    
T  38311 tgacaaccttg 38301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 38560 - 38475
Alignment:
Q  1 tgtataagtattttgtggactttaaa--ttaagtcatatatgactatatacaattaatagc--atatttagcattatttttgtttt 82  Q
    |||||| |||||||||||||||| ||  ||||||| | ||||||||||||||||| ||| |  ||||||| |||||||||||||||    
T  38560 tgtatatgtattttgtggactttgaactttaagtcctttatgactatatacaatttataacatatatttatcattatttttgtttt 38475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 237
Target Start/End: Original strand, 95 - 183
Alignment:
Q  151 aaatccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaaccttg 237  Q
    ||||||||||||||| |||   |||||||||||||||||||| ||| ||||||| ||| ||||||||||| |||||||||| |||||||    
T  95 aaatccttcgattttaattacaattttacgagtcccgattttgctactcccttttgacttgaagtaaagtcccgattttgataaccttg 183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1178 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1178
Description:

Target: scaffold1178; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 466 - 552
Alignment:
Q  30 agtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    |||||| ||||||||||| ||||| ||| |||||  ||||||||||||||||||||||| ||||| || |||||||||||||||||||    
T  466 agtcatttatgactatatgcaatttatatcatatatttagcattatttttgttttggtagaatcc-tcgattttgattgcgattttac 552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 241
Target Start/End: Original strand, 8396 - 8515
Alignment:
Q  125 tatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttcc 221  Q
    ||||||||||||| || |  ||||||||| |||||||||||||| ||  |||||| ||||||| ||||||||| ||||||| ||| | ||||||| | ||    
T  8396 tatcaattctacacaactccttgagtaaaatccttcgattttgactgcaattttatgagtcccaattttactactccctttcgacttaaagtaaactccc 8495  T
Q  222 gattttgacaaccttgattg 241  Q
    |||||||| |||||||||||    
T  8496 gattttgataaccttgattg 8515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0526; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 8288 - 8373
Alignment:
Q  30 agtcatatatgactatatacaattaatagc-atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    |||||| ||||||||||| ||||| |||   |||||||| ||||| |||||||||||| ||||| || |||||||||||||||||||    
T  8288 agtcatttatgactatatgcaatttatacatatatttagtattatatttgttttggtagaatcc-tcgattttgattgcgattttac 8373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 76192 - 76081
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||||  ||||||||| ||||||||| || ||||  |||||||||||||||  ||| ||||| ||||| |||  |||||||||| |||||||    
T  76192 attctacaaaagtctttgagtaaaatccttcgatctt-attgcaattttacgagtcccgggtttgctatttcctttcgactggaagtaaagtcccgattt 76094  T
Q  227 tgacaaccttgat 239  Q
    |||||||||||||    
T  76093 tgacaaccttgat 76081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 79 - 236
Target Start/End: Original strand, 145777 - 145942
Alignment:
Q  79 ttttggtaaaatccatccattttgattgcgattttacaattt-----cttgtatcaattctacaaaagtagttgagtaaa-tccttcgattttgattg-- 170  Q
    |||||||| |||| ||| ||||||||||| |||||| | |||     ||| |||| ||||||||||||||  |||||||| |||||||||||||||||      
T  145777 ttttggtagaatcaatcgattttgattgcaattttagattttgctatcttatatcgattctacaaaagtaagtgagtaaaatccttcgattttgattgct 145876  T
Q  171 attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattttgacaacctt 236  Q
    ||||||||| |  |||||| ||||||  |||| ||||||||| ||| |  | ||||||||||||||    
T  145877 attttacgattttcgatttaactattttctttcgacctgaagcaaaatctcaattttgacaacctt 145942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 18559 - 18619
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttacaattt 120  Q
    |||||||| ||||||||||||||| || |||||||| ||||||||||| ||||||| ||||    
T  18559 atatttagtattatttttgttttgatagaatccatctattttgattgcaattttacgattt 18619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 229
Target Start/End: Original strand, 24631 - 24733
Alignment:
Q  130 attctacaaaagtagttgagtaaa-tccttcgattttgattg--attttacgagtcccgattttactattccctttagacctgaagtaaagttccgattt 226  Q
    |||||||||||  | ||||||||| || || ||||||||||   |||||||||||||||||||| ||| ||||||| ||| ||||||||||||  |||||    
T  24631 attctacaaaaaaatttgagtaaaatcttttgattttgattacaattttacgagtcccgattttgctactccctttcgacttgaagtaaagttttgattt 24730  T
Q  227 tga 229  Q
    |||    
T  24731 tga 24733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 133143 - 133027
Alignment:
Q  1 tgtataagtattttgtggactttaaa-ttaagtcatatatgactatatacaattaatagcatat--ttagcattatttttgttttggtaaaatccatcca 97  Q
    |||||| |||||||||||||||| || ||  ||||| ||||||||||| ||||| ||| |||||  ||| ||||| ||||||||| ||| ||||| |  |    
T  133143 tgtatatgtattttgtggactttgaactttggtcatttatgactatatgcaatttataacatatatttaacattaattttgttttagtagaatccttg-a 133045  T
Q  98 ttttgattgcgattttac 115  Q
    ||||||||||||||||||    
T  133044 ttttgattgcgattttac 133027  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 35004 - 34909
Alignment:
Q  1 tgtataagtattttgtggactttaaattaagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccat 94  Q
    ||||||| |||||||||||||||||| | || ||| ||||| ||| || |||  ||| |  |||| |||||||||||||||||| |||||||||||    
T  35004 tgtataaatattttgtggactttaaactgagccatttatgattatgtataatatataacatatatgtagcattatttttgtttttgtaaaatccat 34909  T

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Target: scaffold0684 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0684
Description:

Target: scaffold0684; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 5233 - 5124
Alignment:
Q  8 gtattttgtggacttt-aaattaagtcatatatgactatatacaattaatagc--atatttagcattatttttgttttggtaaaatccatccattttgat 104  Q
    |||||||||||||||| || ||   |||| |||||||| || ||||| ||| |  ||||||||||||||||||  ||||||| ||||| || ||||||||    
T  5233 gtattttgtggactttgaactttgatcatttatgactacatgcaatttataacatatatttagcattatttttcatttggtagaatcc-tcgattttgat 5135  T
Q  105 tgcgattttac 115  Q
    |||||||||||    
T  5134 tgcgattttac 5124  T

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Target: scaffold0163 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 2940 - 2994
Alignment:
Q  60 atatttagcattatttttgttttggtaaaatccatccattttgattgcgattttac 115  Q
    ||||||||||||||||||  ||||||| ||||| || |||||||||||||||||||    
T  2940 atatttagcattatttttcatttggtagaatcc-tcgattttgattgcgattttac 2994  T

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