View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3556_high_14 (Length: 272)
Name: NF3556_high_14
Description: NF3556
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3556_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 258
Target Start/End: Original strand, 39726976 - 39727233
Alignment:
| Q |
1 |
tttaaccagtctggtactgctagacttgtccatgcttggtatgctaccggtaatgtgtttaccggtggagcagccatgattaatgtttgcttagtttata |
100 |
Q |
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| T |
39726976 |
tttaaccagtctggtactgctagacttgtccatgcttggtatgctaccggtaatgtgtttaccggtggagcagccatgattaatgtttgcttagtttata |
39727075 |
T |
|
| Q |
101 |
tattgttactattacaattgcacactcaataaatactctatgaacttggtttatatatacagagagctaagatacgtgtatacgtgactatgtgatgtaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
39727076 |
tattgttactattacaattgcacactcaataaatactctatgaacttggtttatatatacagagagctaagatacgtgtatacgtgaatatgtgatgtaa |
39727175 |
T |
|
| Q |
201 |
aagagctaaaccaaagaaccgttgacctacaaaaattgtttaaggtatcatttttata |
258 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39727176 |
aagagctaaaccaaagaaccgttgacctacaaaaattgtttaaggtatcatttttata |
39727233 |
T |
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