View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3559_high_18 (Length: 251)

Name: NF3559_high_18
Description: NF3559
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3559_high_18
NF3559_high_18
[»] chr4 (60 HSPs)
chr4 (71-170)||(39241543-39241642)
chr4 (168-235)||(39241673-39241740)
chr4 (3-67)||(42490919-42490983)
chr4 (4-71)||(28657438-28657505)
chr4 (9-70)||(46173546-46173607)
chr4 (3-67)||(2109442-2109506)
chr4 (9-65)||(28676155-28676211)
chr4 (4-68)||(43769721-43769785)
chr4 (9-68)||(28480541-28480600)
chr4 (9-68)||(28481415-28481474)
chr4 (9-68)||(28482290-28482349)
chr4 (9-67)||(30973596-30973654)
chr4 (9-66)||(30778267-30778324)
chr4 (10-67)||(31657657-31657714)
chr4 (9-66)||(39241304-39241361)
chr4 (3-68)||(46686243-46686307)
chr4 (30-70)||(46566925-46566965)
chr4 (30-69)||(6953423-6953462)
chr4 (30-72)||(4896535-4896577)
chr4 (9-63)||(48326555-48326609)
chr4 (3-44)||(25725691-25725732)
chr4 (4-69)||(33093113-33093178)
chr4 (9-66)||(36413329-36413386)
chr4 (3-40)||(41849728-41849765)
chr4 (9-69)||(5234474-5234534)
chr4 (14-66)||(11997685-11997737)
chr4 (30-66)||(23347775-23347811)
chr4 (3-67)||(26440675-26440739)
chr4 (6-66)||(32365667-32365727)
chr4 (3-66)||(37547065-37547126)
chr4 (30-66)||(48099811-48099847)
chr4 (30-66)||(52392260-52392296)
chr4 (9-68)||(4511823-4511882)
chr4 (3-42)||(5249904-5249943)
chr4 (3-42)||(5622493-5622532)
chr4 (3-66)||(37731926-37731989)
chr4 (10-65)||(52846230-52846285)
chr4 (9-68)||(54036532-54036591)
chr4 (4-66)||(39312613-39312675)
chr4 (25-67)||(41119500-41119542)
chr4 (5-42)||(149483-149520)
chr4 (9-66)||(1580286-1580342)
chr4 (3-44)||(12241091-12241132)
chr4 (29-66)||(15596396-15596433)
chr4 (3-64)||(17367091-17367151)
chr4 (10-67)||(26718379-26718436)
chr4 (10-67)||(26731007-26731064)
chr4 (3-44)||(33820333-33820374)
chr4 (30-67)||(34116575-34116612)
chr4 (4-69)||(55601698-55601763)
chr4 (12-68)||(4949516-4949572)
chr4 (9-65)||(5386385-5386441)
chr4 (30-66)||(6370980-6371016)
chr4 (3-67)||(9827980-9828044)
chr4 (30-66)||(11064124-11064160)
chr4 (30-66)||(18568850-18568886)
chr4 (30-66)||(26885291-26885327)
chr4 (11-67)||(32621637-32621693)
chr4 (3-63)||(40983160-40983220)
chr4 (29-69)||(51717316-51717356)
[»] chr7 (43 HSPs)
chr7 (3-67)||(25887593-25887657)
chr7 (9-70)||(22330634-22330695)
chr7 (9-68)||(37351993-37352052)
chr7 (11-68)||(2469701-2469758)
chr7 (3-68)||(3937118-3937183)
chr7 (3-68)||(31785468-31785533)
chr7 (3-68)||(34992332-34992397)
chr7 (29-73)||(156016-156060)
chr7 (9-65)||(7817650-7817706)
chr7 (9-69)||(28862084-28862144)
chr7 (9-69)||(41985103-41985163)
chr7 (10-69)||(11352977-11353036)
chr7 (9-63)||(21839136-21839190)
chr7 (6-68)||(26041319-26041381)
chr7 (9-70)||(37856168-37856229)
chr7 (3-63)||(23680035-23680095)
chr7 (3-67)||(40227163-40227227)
chr7 (10-65)||(3062343-3062398)
chr7 (12-67)||(33224834-33224889)
chr7 (3-66)||(34264594-34264657)
chr7 (3-42)||(38259099-38259138)
chr7 (9-68)||(39875812-39875871)
chr7 (9-68)||(43213317-43213376)
chr7 (3-66)||(43444635-43444698)
chr7 (4-67)||(47078248-47078311)
chr7 (3-42)||(47954098-47954137)
chr7 (7-68)||(2323302-2323363)
chr7 (9-66)||(8459614-8459671)
chr7 (29-70)||(10591151-10591192)
chr7 (9-70)||(27778075-27778136)
chr7 (33-66)||(40842405-40842438)
chr7 (9-66)||(44196222-44196279)
chr7 (29-66)||(45607024-45607061)
chr7 (30-70)||(4971286-4971326)
chr7 (30-66)||(6427210-6427246)
chr7 (9-69)||(6822536-6822596)
chr7 (9-73)||(30180511-30180575)
chr7 (10-42)||(41893951-41893983)
chr7 (33-69)||(41966329-41966365)
chr7 (30-66)||(42663084-42663120)
chr7 (3-43)||(47356287-47356327)
chr7 (30-70)||(47530326-47530366)
chr7 (30-66)||(48866965-48867001)
[»] chr8 (45 HSPs)
chr8 (3-68)||(7325724-7325789)
chr8 (3-69)||(5740782-5740848)
chr8 (9-70)||(324097-324158)
chr8 (4-69)||(30439503-30439568)
chr8 (9-67)||(5502370-5502428)
chr8 (9-71)||(37392131-37392193)
chr8 (4-68)||(41541867-41541931)
chr8 (11-66)||(1796496-1796551)
chr8 (12-70)||(888262-888320)
chr8 (9-70)||(895930-895991)
chr8 (9-66)||(1370288-1370345)
chr8 (29-70)||(11223893-11223934)
chr8 (9-66)||(37524431-37524488)
chr8 (9-66)||(44103776-44103833)
chr8 (29-69)||(22852873-22852913)
chr8 (12-68)||(37656999-37657055)
chr8 (3-67)||(45405816-45405880)
chr8 (32-67)||(7279992-7280027)
chr8 (4-67)||(7586159-7586222)
chr8 (9-68)||(14710896-14710955)
chr8 (3-66)||(16011914-16011977)
chr8 (30-69)||(35500988-35501027)
chr8 (3-70)||(41639796-41639863)
chr8 (4-42)||(12367042-12367080)
chr8 (30-68)||(28927679-28927717)
chr8 (3-65)||(32020462-32020524)
chr8 (3-65)||(39211054-39211116)
chr8 (30-68)||(45101394-45101432)
chr8 (3-68)||(157065-157130)
chr8 (9-66)||(1179406-1179462)
chr8 (9-66)||(9047073-9047130)
chr8 (30-71)||(26629145-26629186)
chr8 (3-68)||(29107993-29108058)
chr8 (12-65)||(32954853-32954906)
chr8 (4-41)||(37597275-37597312)
chr8 (3-68)||(38939186-38939251)
chr8 (3-44)||(39021440-39021481)
chr8 (30-71)||(40842009-40842050)
chr8 (3-68)||(43419877-43419942)
chr8 (30-66)||(6849296-6849332)
chr8 (30-66)||(12732842-12732878)
chr8 (8-44)||(13884162-13884198)
chr8 (12-68)||(18538384-18538440)
chr8 (3-63)||(26000552-26000612)
chr8 (30-66)||(43290900-43290936)
[»] chr3 (43 HSPs)
chr3 (3-71)||(1765399-1765467)
chr3 (4-68)||(49761317-49761381)
chr3 (3-66)||(30580133-30580196)
chr3 (9-63)||(31997816-31997870)
chr3 (6-67)||(47683800-47683861)
chr3 (9-70)||(48117343-48117404)
chr3 (9-69)||(43169756-43169816)
chr3 (3-67)||(54195350-54195414)
chr3 (3-69)||(52564644-52564708)
chr3 (29-67)||(7294134-7294172)
chr3 (30-67)||(24537218-24537255)
chr3 (3-44)||(30805600-30805641)
chr3 (4-69)||(46094420-46094485)
chr3 (3-72)||(55361230-55361299)
chr3 (3-67)||(28700471-28700535)
chr3 (9-69)||(36318285-36318345)
chr3 (8-68)||(46952947-46953007)
chr3 (3-67)||(48490510-48490574)
chr3 (3-67)||(50876359-50876423)
chr3 (7-66)||(9719453-9719512)
chr3 (3-66)||(23868975-23869038)
chr3 (9-68)||(26672410-26672468)
chr3 (29-68)||(48945845-48945884)
chr3 (30-68)||(1901961-1901999)
chr3 (30-68)||(1911407-1911445)
chr3 (20-70)||(3483128-3483178)
chr3 (30-68)||(18169155-18169193)
chr3 (3-68)||(38692321-38692384)
chr3 (33-70)||(108427-108464)
chr3 (3-36)||(1261372-1261405)
chr3 (29-66)||(20380923-20380960)
chr3 (12-69)||(23906993-23907050)
chr3 (3-68)||(37035522-37035587)
chr3 (3-44)||(41717483-41717524)
chr3 (13-70)||(44937215-44937272)
chr3 (3-68)||(55322713-55322778)
chr3 (30-66)||(2482709-2482745)
chr3 (30-66)||(14957836-14957872)
chr3 (9-69)||(29846894-29846954)
chr3 (32-68)||(35272025-35272061)
chr3 (9-65)||(35554118-35554174)
chr3 (30-66)||(51464307-51464343)
chr3 (30-66)||(53718049-53718085)
[»] chr1 (62 HSPs)
chr1 (4-72)||(49241502-49241570)
chr1 (9-68)||(49453489-49453548)
chr1 (3-69)||(33358155-33358221)
chr1 (4-68)||(8200085-8200149)
chr1 (6-66)||(41507194-41507254)
chr1 (3-67)||(43757598-43757662)
chr1 (9-68)||(40596057-40596116)
chr1 (3-70)||(42539414-42539481)
chr1 (9-68)||(45272163-45272222)
chr1 (4-67)||(48220141-48220204)
chr1 (9-63)||(5477166-5477220)
chr1 (9-67)||(5975547-5975605)
chr1 (3-69)||(27687516-27687582)
chr1 (9-66)||(5309054-5309111)
chr1 (3-68)||(14983782-14983847)
chr1 (11-68)||(31480124-31480181)
chr1 (9-66)||(32319311-32319368)
chr1 (4-69)||(44632537-44632602)
chr1 (3-68)||(46903479-46903544)
chr1 (30-71)||(50328176-50328217)
chr1 (10-71)||(50781573-50781634)
chr1 (3-63)||(41558007-41558067)
chr1 (3-66)||(11597648-11597711)
chr1 (3-66)||(16836112-16836175)
chr1 (3-66)||(40139126-40139189)
chr1 (4-66)||(6143695-6143757)
chr1 (3-72)||(21446215-21446284)
chr1 (12-65)||(45065907-45065960)
chr1 (30-67)||(48872985-48873022)
chr1 (4-44)||(9445141-9445181)
chr1 (10-66)||(18336158-18336214)
chr1 (30-70)||(50226914-50226954)
chr1 (12-68)||(50797789-50797845)
chr1 (9-65)||(51571416-51571472)
chr1 (3-42)||(9566957-9566996)
chr1 (3-42)||(9987987-9988026)
chr1 (30-69)||(11097919-11097958)
chr1 (10-65)||(19969565-19969620)
chr1 (9-68)||(48325781-48325840)
chr1 (3-42)||(50775153-50775192)
chr1 (9-67)||(15466757-15466815)
chr1 (9-67)||(19427520-19427578)
chr1 (30-68)||(35846354-35846392)
chr1 (4-66)||(47398449-47398511)
chr1 (4-66)||(48872026-48872088)
chr1 (3-68)||(1690444-1690509)
chr1 (3-36)||(11038303-11038336)
chr1 (3-44)||(12717668-12717709)
chr1 (9-66)||(16252762-16252819)
chr1 (9-66)||(29264015-29264072)
chr1 (9-66)||(29293959-29294016)
chr1 (30-67)||(30530609-30530646)
chr1 (25-66)||(34974779-34974820)
chr1 (9-66)||(37690429-37690486)
chr1 (3-68)||(37741949-37742014)
chr1 (30-67)||(49425737-49425774)
chr1 (3-68)||(49589971-49590036)
chr1 (30-66)||(20288375-20288411)
chr1 (32-68)||(25302680-25302716)
chr1 (4-44)||(29154814-29154854)
chr1 (30-66)||(32821635-32821671)
chr1 (30-66)||(45740579-45740615)
[»] chr2 (47 HSPs)
chr2 (3-66)||(43725216-43725279)
chr2 (3-67)||(9834078-9834142)
chr2 (3-69)||(6215241-6215307)
chr2 (9-71)||(29795442-29795504)
chr2 (10-68)||(42081046-42081104)
chr2 (4-69)||(3012843-3012908)
chr2 (3-68)||(8482229-8482294)
chr2 (12-68)||(6646833-6646889)
chr2 (29-69)||(11229355-11229395)
chr2 (3-66)||(7121390-7121453)
chr2 (3-66)||(24727426-24727489)
chr2 (4-67)||(42678760-42678823)
chr2 (9-67)||(15141472-15141530)
chr2 (3-68)||(1095833-1095898)
chr2 (6-67)||(22353175-22353236)
chr2 (9-66)||(25801816-25801873)
chr2 (3-68)||(37085218-37085283)
chr2 (9-66)||(38600825-38600882)
chr2 (4-69)||(40937061-40937126)
chr2 (3-68)||(42283247-42283312)
chr2 (30-70)||(5067681-5067721)
chr2 (3-67)||(13538247-13538311)
chr2 (9-69)||(30996736-30996796)
chr2 (12-68)||(32972912-32972968)
chr2 (30-70)||(33296106-33296146)
chr2 (9-69)||(36212061-36212121)
chr2 (9-68)||(4263867-4263925)
chr2 (4-67)||(26277106-26277169)
chr2 (12-67)||(37966366-37966421)
chr2 (30-68)||(4738607-4738645)
chr2 (32-66)||(5455490-5455524)
chr2 (10-68)||(10711734-10711792)
chr2 (30-72)||(14954634-14954676)
chr2 (3-69)||(33737330-33737396)
chr2 (9-67)||(40496360-40496418)
chr2 (4-66)||(42866762-42866824)
chr2 (9-63)||(44422981-44423035)
chr2 (15-68)||(2971823-2971876)
chr2 (3-36)||(11728118-11728151)
chr2 (4-65)||(23352902-23352963)
chr2 (30-67)||(37767801-37767838)
chr2 (3-67)||(285466-285530)
chr2 (4-67)||(25086334-25086395)
chr2 (30-66)||(30856807-30856843)
chr2 (30-66)||(36435681-36435717)
chr2 (4-68)||(41586664-41586728)
chr2 (3-63)||(42372494-42372554)
[»] chr6 (22 HSPs)
chr6 (10-70)||(5028269-5028329)
chr6 (9-68)||(12427230-12427289)
chr6 (12-68)||(12441536-12441592)
chr6 (9-69)||(31517183-31517243)
chr6 (9-68)||(1897695-1897754)
chr6 (13-67)||(2241825-2241879)
chr6 (11-73)||(28041818-28041880)
chr6 (15-69)||(28748121-28748175)
chr6 (9-66)||(12177577-12177634)
chr6 (9-66)||(33527435-33527492)
chr6 (3-68)||(30945821-30945888)
chr6 (9-68)||(1196056-1196115)
chr6 (3-42)||(5080564-5080603)
chr6 (4-63)||(14693249-14693308)
chr6 (17-68)||(32149498-32149549)
chr6 (3-66)||(32644623-32644686)
chr6 (9-67)||(9200118-9200176)
chr6 (4-41)||(13658869-13658906)
chr6 (9-70)||(26860618-26860678)
chr6 (30-70)||(31883339-31883379)
chr6 (30-66)||(32457287-32457323)
chr6 (30-70)||(33421756-33421796)
[»] chr5 (42 HSPs)
chr5 (3-67)||(6865784-6865848)
chr5 (9-68)||(13734363-13734422)
chr5 (9-68)||(33567226-33567285)
chr5 (9-66)||(30334769-30334826)
chr5 (4-68)||(34270337-34270401)
chr5 (4-63)||(1839342-1839401)
chr5 (11-66)||(5130383-5130438)
chr5 (29-68)||(11768024-11768063)
chr5 (9-68)||(14206398-14206457)
chr5 (27-69)||(23991166-23991208)
chr5 (3-68)||(372717-372782)
chr5 (29-70)||(26660445-26660486)
chr5 (29-70)||(26932037-26932078)
chr5 (9-62)||(29227721-29227774)
chr5 (4-68)||(3640194-3640258)
chr5 (3-63)||(41865616-41865676)
chr5 (29-68)||(1774317-1774356)
chr5 (3-42)||(4088479-4088518)
chr5 (3-42)||(7287186-7287225)
chr5 (9-68)||(9226311-9226370)
chr5 (3-42)||(16690535-16690574)
chr5 (3-42)||(19522000-19522039)
chr5 (9-60)||(31284397-31284448)
chr5 (9-67)||(8725425-8725483)
chr5 (4-42)||(9581615-9581653)
chr5 (30-72)||(14780456-14780498)
chr5 (29-71)||(19127119-19127161)
chr5 (30-68)||(28811427-28811465)
chr5 (29-67)||(36713212-36713250)
chr5 (9-67)||(39458667-39458725)
chr5 (3-40)||(3564577-3564614)
chr5 (33-66)||(12661985-12662018)
chr5 (9-42)||(13089784-13089817)
chr5 (9-66)||(16202731-16202788)
chr5 (30-63)||(18449264-18449297)
chr5 (3-44)||(36572724-36572765)
chr5 (9-57)||(2117627-2117675)
chr5 (10-42)||(10649471-10649503)
chr5 (4-68)||(15953042-15953106)
chr5 (9-65)||(33910091-33910147)
chr5 (30-66)||(34381012-34381048)
chr5 (30-66)||(39595272-39595308)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-69)||(31603-31663)
[»] scaffold0194 (1 HSPs)
scaffold0194 (11-69)||(29777-29835)
[»] scaffold0100 (1 HSPs)
scaffold0100 (12-68)||(44784-44840)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-67)||(3277-3332)
[»] scaffold0011 (1 HSPs)
scaffold0011 (30-68)||(219699-219737)
[»] scaffold0508 (1 HSPs)
scaffold0508 (29-66)||(11570-11607)
[»] scaffold0026 (1 HSPs)
scaffold0026 (30-66)||(113625-113661)


Alignment Details
Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 71 - 170
Target Start/End: Original strand, 39241543 - 39241642
Alignment:
Q  71 attgaaatggttataaaaaataatggcacaaaaataactgagtaaagtagatgaagataaagcattgatacatagtaaataaatcaagctttgagttaat 170  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  39241543 attgaaatggttacaaaaaataatggcacaaaaataactgagtaaagtagatgaagataaagcattgatacatagtcaatgaatcaggctttgagttaat 39241642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 39241673 - 39241740
Alignment:
Q  168 aatccattgtcatgaacactcttttgattcaacttctgtagttcaactcaagaaattgatcaactact 235  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39241673 aatccattgtcatggacactcttttgattcaacttctgtagttcaactcaagaaattgatcaactact 39241740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 42490983 - 42490919
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||| |||| |||||||||||||||    
T  42490983 aaaaacataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctct 42490919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 71
Target Start/End: Original strand, 28657438 - 28657505
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  |||||||||||||||||||    
T  28657438 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctcttata 28657505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 46173607 - 46173546
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||| || |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  46173607 ataatgtgagtacgagagagaaagttgtcacaaagtggttgtacaaatatcatttctcttat 46173546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 2109506 - 2109442
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||||||||| ||||||||| ||  ||| |||| |||||||||||||||    
T  2109506 aaaaacataatgtgagtatgaaagagaaagttgtcaaaagatggttgtacaaatatcatttctct 2109442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 28676155 - 28676211
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||||||||||||| ||||||||||||| ||| |||| |||||||||||||    
T  28676155 ataatgtgagtatgaaagagaaagttgtcacaaaatggttgtacaaatatcatttct 28676211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 43769785 - 43769721
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||    
T  43769785 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 43769721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 28480541 - 28480600
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  28480541 ataatatgagtatgacagagaaagttgtcataaagtggttgtataaatatcatttctctt 28480600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 28481415 - 28481474
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  28481415 ataatatgagtatgacagagaaagttgtcataaagtggttgtataaatatcatttctctt 28481474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 28482290 - 28482349
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||    
T  28482290 ataatatgagtatgacagagaaagttgtcataaagtggttgtataaatatcatttctctt 28482349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 30973654 - 30973596
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||  ||||||||| ||||||| |||| |||||||||||||||    
T  30973654 ataatgtgagtatgaaagaaaaagttgtcataaagtggttgtacaaatatcatttctct 30973596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 30778267 - 30778324
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||| ||||||||||||||    
T  30778267 ataatgtgagtatgagagagaaagttgtcacaaattggctgtacaaatatcatttctc 30778324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 31657714 - 31657657
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||| |||| ||||||||||||| |||||||  |||||||||||||||    
T  31657714 taatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 39241304 - 39241361
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||| ||||||||||||||    
T  39241304 ataatgtgagtatgagagagaaagttgtcacaaattggttgtacaaatatcatttctc 39241361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 46686307 - 46686243
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||| |||| ||||||| ||||| ||| |||| ||||||||||||||||    
T  46686307 aaaaacataatgtgagtatgagagagaaagttgt-acaaaatggttgtacaaatatcatttctctt 46686243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 46566965 - 46566925
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||||||||||| ||||||||||||||||||    
T  46566965 aagttgtcacaaagtggatgtacaaatatcatttctcttat 46566925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 6953423 - 6953462
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  6953423 aagttgtcacaaagtggatgtacaaatatcatttctctta 6953462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 4896535 - 4896577
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttatat 72  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  4896535 aagttgtcacaaagtggttgtacaaatatcatttctcttatat 4896577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 48326609 - 48326555
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||||||||||| |||  ||||||||||||||||| |||| |||||||||||    
T  48326609 ataatgtgagtatgagagaaaaagttgtcacaaagtggttgtacaaatatcattt 48326555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 25725691 - 25725732
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    |||||||||||||||||||||||||| ||||||||| |||||    
T  25725691 aaaaacataatgtgagtatgaaagagaaagttgtcaaaaagt 25725732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 33093113 - 33093178
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||||||| ||||| || ||||||||||||| | | |||| |||||||||||||||||    
T  33093113 aaaatataatgtgagtgtgaaaaagaaagttgtcacaaaatagttgtacaaatatcatttctctta 33093178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 36413329 - 36413386
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| || || ||| ||||||| |||||||||||||||||||    
T  36413329 ataatgtgagtatgagagagaaaattatcataaagtggttgtataaatatcatttctc 36413386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 41849765 - 41849728
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcaca 40  Q
    |||||||||||||||||||||||||| |||||||||||    
T  41849765 aaaaacataatgtgagtatgaaagagaaagttgtcaca 41849728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 5234474 - 5234534
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||| ||||||||| |||| ||||| ||||||||||  |||| |||||||||||||||||    
T  5234474 ataatatgagtatgagagagaaagttatcacaaagtgattgtacaaatatcatttctctta 5234534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Complemental strand, 11997737 - 11997685
Alignment:
Q  14 gtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||| |  ||||||||||||||||| |||| ||||||||||||||    
T  11997737 gtgagtatgaaaaataaagttgtcacaaagtggttgtacaaatatcatttctc 11997685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 23347811 - 23347775
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||||| ||||||||||||||    
T  23347811 aagttgtcacaaagtggatgtacaaatatcatttctc 23347775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 26440739 - 26440675
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||| ||||||||||||||  |||  || |||||||||||||| |||| |||||||||||||||    
T  26440739 aaaaatataatgtgagtatgggagataaaattgtcacaaagtggttgtacaaatatcatttctct 26440675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 32365667 - 32365727
Alignment:
Q  6 aacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| |||||| ||||| |||| ||||||||||||| ||| |||| ||||||||||||||    
T  32365667 aacatcatgtgaatatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 32365727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 37547126 - 37547065
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| ||||||| |||||  ||||| ||||||||||||||||| |||| ||||||||||||||    
T  37547126 aaaaatataatgtaagtat--aagagaaagttgtcacaaagtggttgtacaaatatcatttctc 37547065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 48099847 - 48099811
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||||||||||||||||||    
T  48099847 aagttgtcacaaagtggttgtataaatatcatttctc 48099811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 52392260 - 52392296
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||||| ||||||||||||||    
T  52392260 aagttgtcacaaagtggatgtacaaatatcatttctc 52392296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 4511882 - 4511823
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||| ||| ||| | || ||||||||||||||||    
T  4511882 ataatgtgagtatgagagagaaagttgtcataaaatggttatacaaatatcatttctctt 4511823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 5249943 - 5249904
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  5249943 aaaaacataatgtgagtatgagagagaaagttgtcacaaa 5249904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 5622532 - 5622493
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  5622532 aaaaagataatgtgagtatgaaagagaaagttgtcacaaa 5622493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 37731989 - 37731926
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||||| |||| |||||||  |||| ||  |||| ||||||||||||||    
T  37731989 aaaaacataatgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctc 37731926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 52846230 - 52846285
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||||||| |||| ||||||||| ||| | ||||| ||||||||||||||    
T  52846230 taatgtgagtatgagagagaaagttgtcataaaatagatgtttaaatatcatttct 52846285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 54036532 - 54036591
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||| |||  ||||||||||||| ||| |||| ||||||||||||||||    
T  54036532 ataatttgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctctt 54036591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 39312613 - 39312675
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||| ||||||||||||||| |||| |||||||||| || | |||||  ||||||||||||||    
T  39312613 aaaaaataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcatttctc 39312675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 41119500 - 41119542
Alignment:
Q  25 agaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||||||| |||| |||||||||||||||    
T  41119500 agagaaagttgtcacaaagtggttgtacaaatatcatttctct 41119542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 149483 - 149520
Alignment:
Q  5 aaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  149483 aaacataatgtgagtatgagagagaaagttgtcacaaa 149520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 1580286 - 1580342
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| || |||||||||||| | |||| ||||||||||||||    
T  1580286 ataatgtgagtatgagagagaaaattgtcacaaagt-gttgtacaaatatcatttctc 1580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 12241132 - 12241091
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||| |||| ||||||||| |||||    
T  12241132 aaaaacataatgtgagtatgagagagaaagttgtcaaaaagt 12241091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 15596433 - 15596396
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  15596433 gaagttgtcacaaagtggttgtacaaatatcatttctc 15596396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 64
Target Start/End: Complemental strand, 17367151 - 17367091
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttc 64  Q
    |||||||||||| |||||| | |||| ||||||||||||| | |||||| ||||||||||||    
T  17367151 aaaaacataatgcgagtataagagagaaagttgtcacaaaat-gatgtacaaatatcatttc 17367091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 26718436 - 26718379
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||| |||| || |||||| ||| |||||||  |||||||||||||||    
T  26718436 taatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctct 26718379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 67
Target Start/End: Complemental strand, 26731064 - 26731007
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||| |||| || |||||| ||| |||||||  |||||||||||||||    
T  26731064 taatgtgagtatgagagagaaaattgtcataaaatggatgttcaaatatcatttctct 26731007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 33820333 - 33820374
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||| |||| ||||||||| |||||    
T  33820333 aaaaacataatgtgagtatgagagagaaagttgtcaaaaagt 33820374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 34116575 - 34116612
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  34116575 aagttgtcacaaagtggttgtacaaatatcatttctct 34116612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 55601698 - 55601763
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||||||||||| |||| ||||||||| ||| | |||||  ||||||| |||||||||    
T  55601698 aaaatataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcttttctctta 55601763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 4949572 - 4949516
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||| |||||||||| || || ||||  ||||||||||||||||    
T  4949572 atgtgagtatgagagagaaagttgtcaccaaatgaatgttcaaatatcatttctctt 4949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 5386441 - 5386385
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    ||||||||||||||| |||| ||||||||| ||| ||| |||  |||||||||||||    
T  5386441 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 6371016 - 6370980
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  6371016 aagttgtcacaaagtggttgtacaaatatcatttctc 6370980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 9827980 - 9828044
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||| ||| |||| |||||||   ||| ||| |||| |||||||||||||||    
T  9827980 aaaaacataatgtgagtgtgagagagaaagttgtactaaaatggttgtacaaatatcatttctct 9828044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 11064124 - 11064160
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  11064124 aagttgtcacaaagtggttgtacaaatatcatttctc 11064160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 18568850 - 18568886
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  18568850 aagttgtcacaaaatggttgtataaatatcatttctc 18568886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 26885327 - 26885291
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  26885327 aagttgtcacaaagtggttgtacaaatatcatttctc 26885291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 67
Target Start/End: Complemental strand, 32621693 - 32621637
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||| | |||| ||||||||||||| ||| |||  |||||||||||||||    
T  32621693 aatgtgagtattagagagaaagttgtcacaaaatggttgtgcaaatatcatttctct 32621637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 40983220 - 40983160
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||||||||||||||||||||||  |||||||  ||| | | |||| |||||||||||    
T  40983220 aaaaacataatgtgagtatgaaagagagagttgtcctaaaatagttgtacaaatatcattt 40983160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 51717316 - 51717356
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||| ||| |||| |||||||||||||||||    
T  51717316 gaagttgtcacaaattggttgtacaaatatcatttctctta 51717356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 4e-19; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 25887657 - 25887593
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||| ||||||||||| |||| |||||||||||||||||||||| |||||||||||||||    
T  25887657 aaaaacatattgtgagtatgagagagaaagttgtcacaaagtggatgtacaaatatcatttctct 25887593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 22330634 - 22330695
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||||    
T  22330634 ataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctcttat 22330695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 37351993 - 37352052
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||    
T  37351993 ataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 37352052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 2469758 - 2469701
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||    
T  2469758 aatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 2469701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 3937118 - 3937183
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||||||||| |||| ||||||||||||| | |||||  ||||||||||||||||    
T  3937118 aaaaagataatgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctctt 3937183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 31785468 - 31785533
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||| ||||||||||||| |||| ||||| ||| ||||||| |||| ||||||||||||||||    
T  31785468 aaaaacacaatgtgagtatgagagagaaagttttcataaagtggttgtacaaatatcatttctctt 31785533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 34992332 - 34992397
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||| ||||||||||||  |||||||| ||| ||| |||| ||||||||||||||||    
T  34992332 aaaaacataatgtaagtatgaaagagagagttgtcataaaatggttgtacaaatatcatttctctt 34992397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 73
Target Start/End: Original strand, 156016 - 156060
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctcttatatt 73  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  156016 gaagttgtcacaaagtggatgtacaaatatcatttctcttttatt 156060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 7817706 - 7817650
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    ||||||||||||||| |||| ||||||||||||| |||||||  |||||||||||||    
T  7817706 ataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 7817650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 28862084 - 28862144
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||| ||| |||||||||| ||||||||| ||| |||||||| |||||||||||||||||    
T  28862084 ataatatgaatatgaaagagaaagttgtcataaaatggatgtacaaatatcatttctctta 28862144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 41985103 - 41985163
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||| ||||||||||||| ||  |||| |||||||||||||||||    
T  41985103 ataatgtgagtatgagagagaaagttgtcacaaattgattgtacaaatatcatttctctta 41985163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 69
Target Start/End: Original strand, 11352977 - 11353036
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||| |||| ||||||||||||| | |||||  |||||||||||||||||    
T  11352977 taatgtgagtatgagagagaaagttgtcacaaaattgatgttcaaatatcatttctctta 11353036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 21839136 - 21839190
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||||||||||| |||  ||||||||| ||||||| ||||||||||||||||    
T  21839136 ataatgtgagtatgagagataaagttgtcaaaaagtggttgtataaatatcattt 21839190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 68
Target Start/End: Complemental strand, 26041381 - 26041319
Alignment:
Q  6 aacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||||||||||| ||||||||| ||| ||| ||||  |||||||||||||||    
T  26041381 aacatcatgtgagtatgaaagagaaagttgtcataaaatggttgtacgaatatcatttctctt 26041319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 37856168 - 37856229
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||  |||  ||||||||||||| ||| |||| ||||||||||||||||||    
T  37856168 ataatgtgagtatgtgagataaagttgtcacaaaatggttgtacaaatatcatttctcttat 37856229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 23680035 - 23680095
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    |||||||||||||| |||||||| || ||||||||||||| | | |||| |||||||||||    
T  23680035 aaaaacataatgtgtgtatgaaaaagaaagttgtcacaaaatagttgtacaaatatcattt 23680095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 40227163 - 40227227
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||||||| |||| ||||||||  ||| | |||||| |||||| ||||||||    
T  40227163 aaaaacataatgtgagtatgagagagaaagttgtcctaaaatcgatgtagaaatattatttctct 40227227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Complemental strand, 3062398 - 3062343
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||||| | |||| ||||||||||||| |||||||  |||||||||||||    
T  3062398 taatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttct 3062343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 33224889 - 33224834
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||| |||| ||||||||||||| | |||||  |||||||||||||||    
T  33224889 atgtgagtatgagagagaaagttgtcacaaaatagatgttcaaatatcatttctct 33224834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 34264657 - 34264594
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||| | || | ||||||||||||| |||  ||| ||||||||||||||    
T  34264657 aaaaacataatgtgagtataagagcgaaagttgtcacaaaatggtcgtacaaatatcatttctc 34264594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 38259138 - 38259099
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||| |||||||||||| |||||||||||||    
T  38259138 aaaaacataatgttagtatgaaagagaaagttgtcacaaa 38259099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 39875812 - 39875871
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||| ||||| |||| ||||||| | ||||||| |||||||||||||||||||||    
T  39875812 ataatatgaatatgagagagaaagttgttaaaaagtggttgtataaatatcatttctctt 39875871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 43213376 - 43213317
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| || |||| | ||||||| |||| ||||||||||||||||    
T  43213376 ataatgtgagtatgagagagaaaattgttagaaagtggttgtacaaatatcatttctctt 43213317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 43444698 - 43444635
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| || |||| ||||||| |||| ||||||||| ||||||| |||| ||||||||||||||    
T  43444698 aaaaatatgatgtaagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctc 43444635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 47078248 - 47078311
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||||| |||| ||||||||| ||| | |||||  |||||||||||||||    
T  47078248 aaaaaataatgtgagtatgagagagaaagttgtcataaaatagatgttcaaatatcatttctct 47078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 47954098 - 47954137
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  47954098 aaaaatataatgtgagtatgaaagagaaagttgtcacaaa 47954137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 2323363 - 2323302
Alignment:
Q  7 acataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| |||||||||||| |||| ||||||||| ||| | | |||| ||||||||||||||||    
T  2323363 acatcatgtgagtatgagagagaaagttgtcataaaattgttgtacaaatatcatttctctt 2323302  T

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Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 8459671 - 8459614
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| ||||||||| |||| ||||||| | ||||||| |||| ||||||||||||||    
T  8459671 ataatatgagtatgagagagaaagttgttaaaaagtggttgtacaaatatcatttctc 8459614  T

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Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 70
Target Start/End: Complemental strand, 10591192 - 10591151
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||||||| |||| |||||||| |||||||||    
T  10591192 gaagttgtcacaaagtggttgtacaaatatcaattctcttat 10591151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 27778136 - 27778075
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||| | |||  ||| ||||||||||| | |||| ||||||||||||||||||    
T  27778136 ataatgtgagtatcagagataaagctgtcacaaagtagttgtacaaatatcatttctcttat 27778075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Complemental strand, 40842438 - 40842405
Alignment:
Q  33 ttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||| ||||||||||||||    
T  40842438 ttgtcacaaagtggatgtacaaatatcatttctc 40842405  T

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Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 44196222 - 44196279
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||| ||||| |||||| ||||||| | |||||||||||| | ||||||||||||    
T  44196222 ataatgtaagtataaaagagaaagttgttaaaaagtggatgtacatatatcatttctc 44196279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 45607061 - 45607024
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  45607061 gaagttgtcacaaagtagatgtacaaatatcatttctc 45607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 4971326 - 4971286
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||| ||| |||| ||||||||||||||||||    
T  4971326 aagttgtcacaaaatggttgtacaaatatcatttctcttat 4971286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 6427246 - 6427210
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||| ||||||| |||||||||||||||||||    
T  6427246 aagttgtcaaaaagtggttgtataaatatcatttctc 6427210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 6822536 - 6822596
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||  ||||||| | ||| ||| |||| |||||||||||||||||    
T  6822536 ataatgtgagtatgagagaaaaagttgttagaaaatggttgtacaaatatcatttctctta 6822596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 73
Target Start/End: Complemental strand, 30180575 - 30180511
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttatatt 73  Q
    ||||||||| ||||  |||  ||||||| ||||||||| |||| ||||||||||| |||||||||    
T  30180575 ataatgtgaatatgtgagataaagttgtgacaaagtggttgtacaaatatcatttttcttatatt 30180511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 41893983 - 41893951
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||||||||| |||||||||||||    
T  41893983 taatgtgagtatgaaagagaaagttgtcacaaa 41893951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 69
Target Start/End: Complemental strand, 41966365 - 41966329
Alignment:
Q  33 ttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||| |||| |||||||||||||||||    
T  41966365 ttgtcacaaagtggttgtacaaatatcatttctctta 41966329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 42663120 - 42663084
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  42663120 aagttgtcacaaaatggatgtacaaatatcatttctc 42663084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 47356287 - 47356327
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaag 43  Q
    ||||||||||||||||| |||||||| ||||| ||||||||    
T  47356287 aaaaacataatgtgagtgtgaaagagaaagttatcacaaag 47356327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 47530326 - 47530366
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||| ||| ||| |||||||||||||||||||||||    
T  47530326 aagttgtcataaaatggttgtataaatatcatttctcttat 47530366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 48866965 - 48867001
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  48866965 aagttgtcacaaagtggctgtacaaatatcatttctc 48867001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 7325789 - 7325724
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||| |||| ||||||| | |||||||||||| ||||||||||||||||    
T  7325789 aaaaacataatgtgagtatgagagagaaagttgttataaagtggatgtacaaatatcatttctctt 7325724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 5740782 - 5740848
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||||||||| |||  ||||||||| ||||||| |||| |||||||||||||||||    
T  5740782 aaaaacataatgtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctctta 5740848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 324097 - 324158
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| | ||||||||||||||||    
T  324097 ataatgtgagtatgacagagaaagttgtcaaaaagtggatgtacatatatcatttctcttat 324158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 30439503 - 30439568
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  |||||||||||||||||    
T  30439503 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctta 30439568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 5502428 - 5502370
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||| ||||| |||| ||||||||||||||||| |||| |||||||||||||||    
T  5502428 ataatgtgaatatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 5502370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Original strand, 37392131 - 37392193
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    ||||||||||||||| |||| ||||||||| ||| ||| |||| |||||||||||||||||||    
T  37392131 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctcttata 37392193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 41541931 - 41541867
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||||||||| | |||| ||||||||||||| |||||||  ||||||||||||||||    
T  41541931 aaaaaataatgtgagtataagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 41541867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 1796551 - 1796496
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| | || ||||||||||||||||| |||| ||||||||||||||    
T  1796551 aatgtgagtatgagaaagaaagttgtcacaaagtggttgtacaaatatcatttctc 1796496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 888262 - 888320
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||| ||||| | || ||||||||||||| ||||||| |||||||||||||||||||    
T  888262 atgtgaatatgagaaagaaagttgtcacaaattggatgtttaaatatcatttctcttat 888320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 895991 - 895930
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||  |||||| ||||||||| ||||||| |||| ||||||||||||| ||||    
T  895991 ataatgtgagtaccaaagagaaagttgtcaaaaagtggttgtacaaatatcatttcttttat 895930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 1370288 - 1370345
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||  |||| ||||||| ||||||||| |||| ||||||||||||||    
T  1370288 ataatgtgagtatgtgagagaaagttgttacaaagtggttgtacaaatatcatttctc 1370345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 11223893 - 11223934
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  11223893 gaagttgtcacaaaatggatgtacaaatatcatttctcttat 11223934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 37524431 - 37524488
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||  |||| ||||||||||||||||  |||| ||||||||||||||    
T  37524431 ataatgtgagtatgtgagagaaagttgtcacaaagtgcttgtacaaatatcatttctc 37524488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 44103833 - 44103776
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| ||||||||| ||||||| |||| |||||| |||||||    
T  44103833 ataatgtgagtatgagagagaaagttgtcataaagtggttgtacaaatataatttctc 44103776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 22852873 - 22852913
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  22852873 gaagttgtcacaaagtggttgtacaaatatcatttctctta 22852913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 37657055 - 37656999
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||| |||||||||| || |||||||  ||||||||||||||||    
T  37657055 atgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctctt 37656999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 45405816 - 45405880
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||||||| |||  |||||||  |||| ||| |||| |||||||||||||||    
T  45405816 aaaaacataatgtgagtatgagagaaaaagttgtatcaaaatggttgtacaaatatcatttctct 45405880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 67
Target Start/End: Original strand, 7279992 - 7280027
Alignment:
Q  32 gttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||| |||||||||||||||    
T  7279992 gttgtcacaaagtggatgtacaaatatcatttctct 7280027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 7586159 - 7586222
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||||||| || |||||||||| || | |||||  |||||||||||||||    
T  7586159 aaaaaataatgtgagtatgaaaaagaaagttgtcaccaaatagatgttcaaatatcatttctct 7586222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 14710896 - 14710955
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||| ||  |||| ||||||||||| ||||    
T  14710896 ataatgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttatctt 14710955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 16011914 - 16011977
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| ||||||||| ||||| |||| || |||||||||||||| |||| |||||| |||||||    
T  16011914 aaaaatataatgtgaatatgagagagaaatttgtcacaaagtggttgtacaaatattatttctc 16011977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 35500988 - 35501027
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  35500988 aagttgtcaaaaagtggttgtataaatatcatttctctta 35501027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 70
Target Start/End: Original strand, 41639796 - 41639863
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||| ||||||||||||||| |||  || |||| | ||| |||||||| ||||||||||||||||||    
T  41639796 aaaaatataatgtgagtatgagagaaaaaattgttagaaaatggatgtacaaatatcatttctcttat 41639863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 12367042 - 12367080
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  12367042 aaaaaataatgtgagtatgaaagagaaagttgtcacaaa 12367080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 28927717 - 28927679
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  28927717 aagttgtcacaaagtggttgtacaaatatcatttctctt 28927679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Original strand, 32020462 - 32020524
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||||| |||||||| |||| ||||| ||| ||| ||| |||| |||||||||||||    
T  32020462 aaaaacataatgcgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttct 32020524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 65
Target Start/End: Complemental strand, 39211116 - 39211054
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    ||||||| ||||||||||||| |||| ||||||||| ||| ||| |||  |||||||||||||    
T  39211116 aaaaacaaaatgtgagtatgagagagaaagttgtcaaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 45101432 - 45101394
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  45101432 aagttgtcacaaagtggttgtacaaatatcatttctctt 45101394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 157130 - 157065
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||| ||||||| |||| |||||||| |||| ||| |||| ||||||||||| ||||    
T  157130 aaaaatataatgtaagtatgagagagaaagttgtcgcaaaatggttgtacaaatatcatttatctt 157065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 1179462 - 1179406
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||| |||| |||| ||||||||||||||||| | || ||||||||||||||    
T  1179462 ataatgtgagaatgagagagaaagttgtcacaaagtgg-tatacaaatatcatttctc 1179406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 9047073 - 9047130
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||| || |||| |||| ||||||||| ||||||| |||| ||||||||||||||    
T  9047073 ataatgtaaggatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 9047130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 26629145 - 26629186
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    ||||||||| ||||||| |||| |||||||||||||||||||    
T  26629145 aagttgtcaaaaagtggttgtacaaatatcatttctcttata 26629186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 29108058 - 29107993
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||||||| |||||| ||||||| | ||| ||  |||| ||||||||||||||||    
T  29108058 aaaaatataatgtgagtataaaagagaaagttgttaaaaaatgattgtacaaatatcatttctctt 29107993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 32954906 - 32954853
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||| | |||| ||||||||||||| |||||||  |||||||||||||    
T  32954906 atgtgagtatcagagagaaagttgtcacaaaatggatgttcaaatatcatttct 32954853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 37597312 - 37597275
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaa 41  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  37597312 aaaaaataatgtgagtatgaaagagaaagttgtcacaa 37597275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 38939186 - 38939251
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||| |||| |||||||   ||| | | |||| ||||||||||||||||    
T  38939186 aaaaacataatgtgagtatgagagagaaagttgtacaaaaatagttgtagaaatatcatttctctt 38939251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 39021440 - 39021481
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||||||||  |||||||| |||||    
T  39021440 aaaaacataatgtgagtatgaaagagagagttgtcaaaaagt 39021481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 71
Target Start/End: Complemental strand, 40842050 - 40842009
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    ||||| ||||||||||| |||| |||||||||||||||||||    
T  40842050 aagttatcacaaagtggttgtacaaatatcatttctcttata 40842009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 43419942 - 43419877
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||| ||||| | |||| || |||||||||| | | |||| ||||||||||||||||    
T  43419942 aaaaacataatgtaagtataagagagaaaattgtcacaaattagttgtacaaatatcatttctctt 43419877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 6849296 - 6849332
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| ||| |||||||||||||||||||    
T  6849296 aagttgtcacaaaatggttgtataaatatcatttctc 6849332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 12732878 - 12732842
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  12732878 aagttgtcacaaagtggttgtacaaatatcatttctc 12732842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 13884162 - 13884198
Alignment:
Q  8 cataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    |||||||||||||||| |||| |||||||||||||||    
T  13884162 cataatgtgagtatgagagagaaagttgtcacaaagt 13884198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 18538440 - 18538384
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||  ||||||||| ||||||| |||| || |||||||||||||    
T  18538440 atgtgagtatgagagataaagttgtcaaaaagtggttgtacaagtatcatttctctt 18538384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 26000612 - 26000552
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    |||||||||| |||||||||| |||  ||||||||| ||| ||| |||| |||||||||||    
T  26000612 aaaaacataacgtgagtatgagagataaagttgtcataaaatggttgtaaaaatatcattt 26000552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 43290900 - 43290936
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  43290900 aagttgtcataaagtggatgtacaaatatcatttctc 43290936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 1e-16; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 3 - 71
Target Start/End: Complemental strand, 1765467 - 1765399
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    |||||||||||||| |||||| |||| ||||||||||||| || ||||| |||||||||||||||||||    
T  1765467 aaaaacataatgtgcgtatgagagagaaagttgtcacaaaatgaatgtacaaatatcatttctcttata 1765399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 49761381 - 49761317
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||    
T  49761381 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 49761317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 30580196 - 30580133
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||| |||||||||||||  ||||||||| ||| ||| |||||||||||||||||||    
T  30580196 aaaaacataatatgagtatgaaagataaagttgtcataaaatggttgtataaatatcatttctc 30580133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 31997870 - 31997816
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||||||||||||| || ||||||||||||||||| |||| |||||||||||    
T  31997870 ataatgtgagtatgaaaaagaaagttgtcacaaagtggttgtacaaatatcattt 31997816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 67
Target Start/End: Complemental strand, 47683861 - 47683800
Alignment:
Q  6 aacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||| |||| ||||||||||||| ||| |||| |||||||||||||||    
T  47683861 aacacaatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 48117404 - 48117343
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||||||||| |||||||   ||| ||| |||||||||||||||||||||||    
T  48117404 ataatgtgagtatgaaagagaaagttgtacaaaaatggttgtataaatatcatttctcttat 48117343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 43169756 - 43169816
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||  ||||||||||||| ||| |||| |||||||||||||||||    
T  43169756 ataatgtgagtatgagagaaaaagttgtcacaaaatggttgtacaaatatcatttctctta 43169816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 54195414 - 54195350
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||| ||||||||||||| |||||| |||||||||| || |||||||  |||||||||||||||    
T  54195414 aaaaaaataatgtgagtataaaagagaaagttgtcactaaatggatgttcaaatatcatttctct 54195350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 52564644 - 52564708
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||||||||| |||  || |||||||||| ||| |||| |||||||||||||||||    
T  52564644 aaaaacataatgtgagtatgagaga--aaattgtcacaaaatggttgtacaaatatcatttctctta 52564708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 7294134 - 7294172
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  7294134 gaagttgtcacaaagtggatgtacaaatatcatttctct 7294172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 24537255 - 24537218
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||||| |||||||||||||||    
T  24537255 aagttgtcacaaagtggatgtacaaatatcatttctct 24537218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 30805600 - 30805641
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||| |||||||||||||| |||||    
T  30805600 aaaaacataatgtgagtatgagagaggaagttgtcaaaaagt 30805641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 46094485 - 46094420
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||||||||||||| || ||||||||| ||| || ||||  |||||||||||||||||    
T  46094485 aaaaaataatgtgagtatgaaatagaaagttgtcataaaatgaatgtccaaatatcatttctctta 46094420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 55361230 - 55361299
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttatat 72  Q
    ||||| ||||||||||||| | |||| |||||||||  || ||| |||| ||||||||||||||||||||    
T  55361230 aaaaaaataatgtgagtataagagagaaagttgtcaagaaatggttgtacaaatatcatttctcttatat 55361299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 28700535 - 28700471
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||||||| |||  ||||||||| ||| ||| |||  |||||||||||||||    
T  28700535 aaaaacataatgtgagtatgagagataaagttgtcaaaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 36318285 - 36318345
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||| ||||||||| |||| || |||||| ||||||||| || |||||||||||||||||    
T  36318285 ataatatgagtatgagagagaaaattgtcaaaaagtggatatacaaatatcatttctctta 36318345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 46953007 - 46952947
Alignment:
Q  8 cataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||||||| |||| ||||| ||| ||| ||| |||| ||||||||||||||||    
T  46953007 cataatgtgagtatgagagagaaagttatcaaaaaatggttgtacaaatatcatttctctt 46952947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 48490510 - 48490574
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||| ||||||||||||||| |||| |||||||   ||||||| |||| |||||||||||||||    
T  48490510 aaaaagataatgtgagtatgagagagaaagttgtacaaaagtggttgtacaaatatcatttctct 48490574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 50876359 - 50876423
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||| ||||||||| |||| ||||||||| ||| | | |||| |||||||||||||||    
T  50876359 aaaaacataatatgagtatgatagagaaagttgtcaaaaaattgttgtacaaatatcatttctct 50876423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 66
Target Start/End: Original strand, 9719453 - 9719512
Alignment:
Q  7 acataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| || | || |||||| ||||||| |||| ||||||||||||||    
T  9719453 acataatgtgagtatgagagggaaaattgtcaaaaagtggttgtacaaatatcatttctc 9719512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 23868975 - 23869038
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| |||||||||||||||||||| || |||| | ||| ||| |||| ||||||||||||||    
T  23868975 aaaaaaataatgtgagtatgaaagagaaaattgttataaaatggttgtacaaatatcatttctc 23869038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 26672468 - 26672410
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||| || ||||  ||||||||||||||||    
T  26672468 ataatgtgagtatgagagag-aagttgtcacaaaatgaatgttcaaatatcatttctctt 26672410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Complemental strand, 48945884 - 48945845
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||||||||| |||| ||||||||||||||||    
T  48945884 gaagttgtcacaaagtggttgtacaaatatcatttctctt 48945845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 1901961 - 1901999
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  1901961 aagttgtcacaaagtggttgtacaaatatcatttctctt 1901999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 1911407 - 1911445
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  1911407 aagttgtcacaaagtggttgtacaaatatcatttctctt 1911445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 3483178 - 3483128
Alignment:
Q  20 atgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||| |||| |||| |||||||||||| |||| ||||||||||||||||||    
T  3483178 atgagagagaaagtcgtcacaaagtggttgtacaaatatcatttctcttat 3483128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 18169193 - 18169155
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  18169193 aagttgtcacaaagtggttgtacaaatatcatttctctt 18169155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 38692321 - 38692384
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||| |||  |||||||| |||||||    
T  38692321 aaaaacataatgtgagtatgagagag--agttgtcacaaaatggttgtccaaatatcacttctctt 38692384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 70
Target Start/End: Complemental strand, 108464 - 108427
Alignment:
Q  33 ttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  108464 ttgtcacaaagtggttgtacaaatatcatttctcttat 108427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 1261372 - 1261405
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgt 36  Q
    |||||||||||||||||||||||||| |||||||    
T  1261372 aaaaacataatgtgagtatgaaagagaaagttgt 1261405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 20380923 - 20380960
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  20380923 gaagttgtcacaaagtggttgtacaaatatcatttctc 20380960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 23906993 - 23907050
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||| |||| ||||||| ||| | ||| |||| |||||||||||||||||    
T  23906993 atgtgagtatgagagagaaagttgtaacataatggttgtacaaatatcatttctctta 23907050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 37035522 - 37035587
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||||||||||| |  || |||||||||| ||| |||  ||||||||||||||||    
T  37035522 aaaaaaataatgtgagtatgaaaaataaaattgtcacaaaatggttgtcaaaatatcatttctctt 37035587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 41717524 - 41717483
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||||||||  |||||||| |||||    
T  41717524 aaaaacataatgtgagtatgaaagagagagttgtcaaaaagt 41717483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 70
Target Start/End: Complemental strand, 44937272 - 44937215
Alignment:
Q  13 tgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||| |||||| ||||||||| ||| | | |||| ||||||||||||||||||    
T  44937272 tgtgagtataaaagagaaagttgtcaaaaaattgttgtacaaatatcatttctcttat 44937215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 55322713 - 55322778
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||   ||| ||||||||||| ||||    
T  55322713 aaaaacataatgtgagtatgggagagaaagttgtcacaaaatgctcgtacaaatatcatttatctt 55322778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 2482709 - 2482745
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  2482709 aagttgtcacaaaatggatgtacaaatatcatttctc 2482745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 14957872 - 14957836
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  14957872 aagttgtcacaaagtggttgtacaaatatcatttctc 14957836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 29846894 - 29846954
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||| |||||||   ||| ||| |||| |||||||||||||||||    
T  29846894 ataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctctta 29846954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 35272061 - 35272025
Alignment:
Q  32 gttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  35272061 gttgtcacaaagtggttgtacaaatatcatttctctt 35272025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 35554118 - 35554174
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    ||||||||||||||| |||| ||||||||| ||||||  | || |||||||||||||    
T  35554118 ataatgtgagtatgagagagaaagttgtcaaaaagtgattatacaaatatcatttct 35554174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 51464307 - 51464343
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  51464307 aagttgtcacaaagtggttgtacaaatatcatttctc 51464343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 53718085 - 53718049
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  53718085 aagttgtcacaaaatggatgtttaaatatcatttctc 53718049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 72
Target Start/End: Original strand, 49241502 - 49241570
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttatat 72  Q
    |||| ||||||||||||||| |||| |||||||||||||||||||||  ||||||||||||||| ||||    
T  49241502 aaaaaataatgtgagtatgagagagaaagttgtcacaaagtggatgttcaaatatcatttctctaatat 49241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 49453548 - 49453489
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||    
T  49453548 ataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctctt 49453489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 33358155 - 33358221
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||| ||||||||||||||| |||| ||||||||||||| |||||||  |||||||||||||||||    
T  33358155 aaaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctta 33358221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 8200149 - 8200085
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||    
T  8200149 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 8200085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 41507194 - 41507254
Alignment:
Q  6 aacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||| |||| ||||||||||||| ||| |||| ||||||||||||||    
T  41507194 aacataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctc 41507254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Complemental strand, 43757662 - 43757598
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||||||||| |||||||  |||| ||| |||| |||||||||||||||    
T  43757662 aaaaacataatgtgagtatgaaagagaaagttgtatcaaaatggttgtacaaatatcatttctct 43757598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 40596057 - 40596116
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||| ||| |||| ||||||||||||||||    
T  40596057 ataatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaatatcatttctctt 40596116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 3 - 70
Target Start/End: Complemental strand, 42539481 - 42539414
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||||| ||| |||| ||||||||||| | ||| |||| ||||||||||||||||||    
T  42539481 aaaaacataatgtgagtctgagagagaaagttgtcacataatggttgtacaaatatcatttctcttat 42539414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 45272163 - 45272222
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||| ||||||| |||| ||||||||||||||||    
T  45272163 ataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctctt 45272222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 67
Target Start/End: Original strand, 48220141 - 48220204
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  |||||||||||||||    
T  48220141 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 63
Target Start/End: Original strand, 5477166 - 5477220
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||||||||||| |||| ||||||||||||||||| |||| |||||||||||    
T  5477166 ataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcattt 5477220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 5975605 - 5975547
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||| |||| ||||||||| |||||||||||| | |||||||||||||    
T  5975605 ataatgtgagtatgagagagaaagttgtcaaaaagtggatgtacatatatcatttctct 5975547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 27687516 - 27687582
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||| ||||||||||||||| |||  ||||||||||||| ||| |||| |||||||||||||||||    
T  27687516 aaaaatataatgtgagtatgagagataaagttgtcacaaaatggttgtacaaatatcatttctctta 27687582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 5309054 - 5309111
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| ||||| ||| |||||||||||||||||||||| |||| ||||||||||||||    
T  5309054 ataatatgagtctgatagaggaagttgtcacaaagtggttgtacaaatatcatttctc 5309111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 14983847 - 14983782
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| ||||| |||| ||||||| | ||||||| |||| ||||||||||||||||    
T  14983847 aaaaacataatgtgaatatgagagagaaagttgttaaaaagtggttgtacaaatatcatttctctt 14983782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 31480124 - 31480181
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||| |||| ||||| |||||||||||||||| | ||||||||||||||    
T  31480124 aatgtgagtatgagagagaaagttatcacaaagtggatgtacatatatcatttctctt 31480181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 32319311 - 32319368
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| |||||||||| || ||||||| |||||||||||||||    
T  32319311 ataatgtgagtatgagagagaaagttgtcaccaaatggatgtttaaatatcatttctc 32319368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 44632602 - 44632537
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||||||||||| |||| |||||||||| || |||||||  |||||||||||||||||    
T  44632602 aaaaaataatgtgagtatgagagagaaagttgtcaccaaatggatgttcaaatatcatttctctta 44632537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 46903544 - 46903479
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||| |||| |||||||  |||| ||| |||| ||||||||||||||||    
T  46903544 aaaaacataatgtgagtatgagagagaaagttgtatcaaaatggttgtacaaatatcatttctctt 46903479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 71
Target Start/End: Original strand, 50328176 - 50328217
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  50328176 aagttgtcacaaagtggatgtttaaatatcatttctcttata 50328217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 71
Target Start/End: Original strand, 50781573 - 50781634
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    |||||||||||||| |||| ||||||||| ||| |||||||  |||||||||||||||||||    
T  50781573 taatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttctcttata 50781634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 41558067 - 41558007
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||||||||||||||||| ||||  |||||||||||| ||| |||| |||||||||||    
T  41558067 aaaaacataatgtgagtatgagagagtgagttgtcacaaaatggttgtacaaatatcattt 41558007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 11597711 - 11597648
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||||  |||| ||||||||||||| ||| |||| | ||||||||||||    
T  11597711 aaaaacataatgtgagtatggcagagaaagttgtcacaaattggttgtacagatatcatttctc 11597648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Original strand, 16836112 - 16836175
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||||| |||  ||||||||||||| ||  |||| ||||||||||||||    
T  16836112 aaaaacataatgtgagtatgagagaaaaagttgtcacaaaatgattgtacaaatatcatttctc 16836175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 40139189 - 40139126
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| ||||||||||||||| |||| ||||||||| ||| ||| |||| ||||||||||||||    
T  40139189 aaaaatataatgtgagtatgagagagaaagttgtcataaaatggttgtacaaatatcatttctc 40139126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 6143757 - 6143695
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||| ||||||| ||||||| |||| |||||||||||||||||||||  ||| ||||||||||    
T  6143757 aaaaaataatgtaagtatgagagagaaagttgtcacaaagtggatgttcaaacatcatttctc 6143695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 72
Target Start/End: Original strand, 21446215 - 21446284
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttatat 72  Q
    ||||| ||||||||||||||| |||| |||||||   ||| ||  |||||||||||||||||||||||||    
T  21446215 aaaaatataatgtgagtatgagagagaaagttgtactaaaatgattgtataaatatcatttctcttatat 21446284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 45065907 - 45065960
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||||| |||| ||||||||||||| |||||||  |||||||||||||    
T  45065907 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttct 45065960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 48872985 - 48873022
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  48872985 aagttgtcacaaagtggttgtataaatatcatttctct 48873022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 9445181 - 9445141
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  9445181 aaaacataatgtgagtatgaaagagaaagttgtcaaaaagt 9445141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Complemental strand, 18336214 - 18336158
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||| |||| ||||||||||||| || ||||  ||||||||||||||    
T  18336214 taatgtgagtatgagagagaaagttgtcacaaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 50226914 - 50226954
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  50226914 aagttgtcacaaagtggttgtacaaatatcatttctcttat 50226954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 50797845 - 50797789
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||| ||||||||||||| ||  |||| ||||||||||||||||    
T  50797845 atgtgagtatgagagagaaagttgtcacaaaatgattgtacaaatatcatttctctt 50797789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 51571472 - 51571416
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    ||||||||| ||||| |||| ||||||||| ||||||| |||| |||||||||||||    
T  51571472 ataatgtgaatatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttct 51571416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 9566957 - 9566996
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  9566957 aaaaacataatgtgagtatgagagagaaagttgtcacaaa 9566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 9988026 - 9987987
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  9988026 aaaaatataatgtgagtatgaaagagaaagttgtcacaaa 9987987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 30 - 69
Target Start/End: Original strand, 11097919 - 11097958
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||| |||||||| |||||||||||||||||    
T  11097919 aagttgtcacaaaatggatgtacaaatatcatttctctta 11097958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 19969565 - 19969620
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||||||||||||| |||| ||||||||| ||| |||||||  |||||||||||||    
T  19969565 taatgtgagtatgagagagaaagttgtcataaaatggatgttcaaatatcatttct 19969620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 48325781 - 48325840
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| | || || |||||||||| ||| |||| ||||||||||||||||    
T  48325781 ataatgtgagtatgagatagaaaattgtcacaaaatggttgtacaaatatcatttctctt 48325840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 50775153 - 50775192
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  50775153 aaaaacataatgtgagtatgagagagaaagttgtcacaaa 50775192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 15466815 - 15466757
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||| ||||  |||  ||||||| |||||||||||||| |||||||||||||||    
T  15466815 ataatgtgaatatgtgagataaagttgttacaaagtggatgtacaaatatcatttctct 15466757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 19427578 - 19427520
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||  |||| |||||||  |||| ||| ||||||||||||||||||||    
T  19427578 ataatgtgagtatgtgagagaaagttgtaccaaaatggttgtataaatatcatttctct 19427520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 35846354 - 35846392
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||| || ||||||||||||||||    
T  35846354 aagttgtcacaaagtggatatacaaatatcatttctctt 35846392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 47398449 - 47398511
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||| |||| || |||||| ||| || ||||  ||||||||||||||    
T  47398449 aaaacataatgtgagtatgagagagaaaattgtcaaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Original strand, 48872026 - 48872088
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| || ||| |||| ||||||||| ||| ||| |||| ||||||||||||||    
T  48872026 aaaacataatgtgggtgtgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctc 48872088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 1690509 - 1690444
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||| | ||||||||| |||  ||||||||||||| ||| |||| |||||| |||||||||    
T  1690509 aaaaacatattatgagtatgagagaaaaagttgtcacaaaatggttgtacaaatattatttctctt 1690444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Complemental strand, 11038336 - 11038303
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgt 36  Q
    |||||||||||||||||||||||||| |||||||    
T  11038336 aaaaacataatgtgagtatgaaagagaaagttgt 11038303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 12717709 - 12717668
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    |||||||||||||||||||||||||| || |||||| |||||    
T  12717709 aaaaacataatgtgagtatgaaagagaaaattgtcaaaaagt 12717668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 16252762 - 16252819
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||| |||||||   ||| ||| |||| ||||||||||||||    
T  16252762 ataatgtgagtatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctc 16252819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 29264072 - 29264015
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||| ||||||| | || ||||||||| ||||||| |||| ||||||||||||||    
T  29264072 ataatgtaagtatgagaaagaaagttgtcataaagtggttgtacaaatatcatttctc 29264015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 29294016 - 29293959
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||| ||||| |||| ||||||||| ||||| | |||| ||||||||||||||    
T  29294016 ataatgtgactatgagagagaaagttgtcataaagtagttgtacaaatatcatttctc 29293959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 30530609 - 30530646
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  30530609 aagttgtcacaaaatggttgtataaatatcatttctct 30530646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 34974779 - 34974820
Alignment:
Q  25 agaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||| ||||||||||||| ||| |||||||||||||||||||    
T  34974779 agagaaagttgtcacaaaatggttgtataaatatcatttctc 34974820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 37690486 - 37690429
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| || |||||| ||||||  |||| ||||||||||||||    
T  37690486 ataatgtgagtatgagagagaaaattgtcataaagtgattgtacaaatatcatttctc 37690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 37741949 - 37742014
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||| |||||||||||| |||||||  |||| ||  |||| ||||||||| ||||||    
T  37741949 aaaaacataatgtaagtatgaaagagaaagttgtatcaaaatgattgtacaaatatcatctctctt 37742014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 49425774 - 49425737
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  49425774 aagttgtcacaaagtggttgtacaaatatcatttctct 49425737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 49589971 - 49590036
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||||||||| | |  ||||||| | ||||||| |||| ||||||||||||||||    
T  49589971 aaaaatataatgtgagtatgagataaaaagttgtaataaagtggttgtacaaatatcatttctctt 49590036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 20288375 - 20288411
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  20288375 aagttgtcacaaattggatgtacaaatatcatttctc 20288411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 68
Target Start/End: Original strand, 25302680 - 25302716
Alignment:
Q  32 gttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  25302680 gttgtcacaaagtggttgtacaaatatcatttctctt 25302716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 29154854 - 29154814
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    |||| ||||||||||||||| |||| |||||||||||||||    
T  29154854 aaaaaataatgtgagtatgagagagaaagttgtcacaaagt 29154814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 32821671 - 32821635
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  32821671 aagttgtcacaaagtggttgtacaaatatcatttctc 32821635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 45740579 - 45740615
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  45740579 aagttgtcacaaagtggttgtacaaatatcatttctc 45740615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 43725279 - 43725216
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||||| |||| ||||||||| ||||| |||||| ||||||||||||||    
T  43725279 aaaaacataatgtgagtatgagagagaaagttgtcataaagtagatgtacaaatatcatttctc 43725216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 9834078 - 9834142
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||| ||||||||||||||  |||||||| ||| ||| ||||||||||||||||||||    
T  9834078 aaaaacataatatgagtatgaaagagatagttgtcataaaatggttgtataaatatcatttctct 9834142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 6215241 - 6215307
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||| |||||||||||||||||||| | ||||| ||||| | | ||||||||||||||||||||||    
T  6215241 aaaaaaataatgtgagtatgaaagagaaggttgtaacaaaatagttgtataaatatcatttctctta 6215307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 9 - 71
Target Start/End: Complemental strand, 29795504 - 29795442
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    ||||||||||||||  |||| ||||||||||||| ||| |||| |||||||||||||||||||    
T  29795504 ataatgtgagtatgtgagagaaagttgtcacaaaatggttgtacaaatatcatttctcttata 29795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 42081104 - 42081046
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||||| |||| ||||||||| ||||||| |||| ||||||||||||||||    
T  42081104 taatgtgagtatgagagagaaagttgtcaaaaagtggctgtacaaatatcatttctctt 42081046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 3012843 - 3012908
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||| ||||||| |||| ||||||||||||| |||||||  |||||||||||||||||    
T  3012843 aaaaaataatgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctta 3012908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 8482229 - 8482294
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||||||| ||||| |||| ||||||||| ||||||| |||| ||||||||||||||||    
T  8482229 aaaaatataatgtgaatatgagagagaaagttgtcataaagtggttgtacaaatatcatttctctt 8482294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 6646889 - 6646833
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||| ||||||||||||| |||||||  ||||||||||||||||    
T  6646889 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 6646833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 29 - 69
Target Start/End: Original strand, 11229355 - 11229395
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  11229355 gaagttgtcacaaagtggatgtacaaatatcatttctctta 11229395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 7121453 - 7121390
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||||| |||| ||||||| ||||| ||| | || ||||||||||||||    
T  7121453 aaaaacataatgtgagtatgagagagaaagttgttacaaaatggttatacaaatatcatttctc 7121390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 24727489 - 24727426
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||||| |||| |||||||  |||| ||| |||| ||||||||||||||    
T  24727489 aaaaacataatgtgagtatgagagagaaagttgtaccaaaatggttgtacaaatatcatttctc 24727426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 42678823 - 42678760
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||||| |||| |||||||||| || |||||||  |||||||||||||||    
T  42678823 aaaaaataatgtgagtatgagagagaaagttgtcactaaatggatgttcaaatatcatttctct 42678760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 15141530 - 15141472
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||| |||| ||||||||| ||| | |||||| |||||||||||||||    
T  15141530 ataatgtgagtatgagagagaaagttgtcataaaatagatgtacaaatatcatttctct 15141472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1095833 - 1095898
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||| ||| ||||| |||| || |||||| ||| |||||||| ||||||||||||||||    
T  1095833 aaaaacataatatgaatatgagagagaaaattgtcataaaatggatgtacaaatatcatttctctt 1095898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 22353175 - 22353236
Alignment:
Q  6 aacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||| | || ||||||||||||| ||  |||| |||||||||||||||    
T  22353175 aacataatgtgagtatgagaaagaaagttgtcacaaaatgattgtacaaatatcatttctct 22353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 25801816 - 25801873
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||  ||||||||||||| ||| |||| ||||||||||||||    
T  25801816 ataatgtgagtatgagagataaagttgtcacaaattggttgtacaaatatcatttctc 25801873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 37085218 - 37085283
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| ||||| ||| |||||||||| ||||||| ||||| || ||||| ||||||||||||||||    
T  37085218 aaaaatataatatgaatatgaaagagaaagttgttacaaattgaatgtacaaatatcatttctctt 37085283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 38600882 - 38600825
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| ||||||||| ||| |||||||| | ||||||||||||    
T  38600882 ataatgtgagtatgagagagaaagttgtcaaaaaatggatgtacatatatcatttctc 38600825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 69
Target Start/End: Original strand, 40937061 - 40937126
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||| ||||||||||||||| |||| ||||| ||||||| |||||||  |||| ||||||||||||    
T  40937061 aaaaaataatgtgagtatgagagagaaagttatcacaaaatggatgttcaaatgtcatttctctta 40937126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 42283247 - 42283312
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||| |||| ||| ||||||  |||||||||||||||| |||| ||||||||||||||||    
T  42283247 aaaagcataacgtgaatataaaagagagagttgtcacaaagtggttgtacaaatatcatttctctt 42283312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 5067681 - 5067721
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  5067681 aagttgtcacaaagtagatgtacaaatatcatttctcttat 5067721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 13538247 - 13538311
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||||||||| |||| ||||||||| | | ||| | ||||||||| ||||||||    
T  13538247 aaaaacataatgtgagtatgatagagaaagttgtcatataatggttatataaatattatttctct 13538311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 30996796 - 30996736
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||| ||||||||| |||||  ||||| ||||||||||| |||||    
T  30996796 ataatgtgagtatgagagagaaagttgtcaaaaagtaaatgtacaaatatcatttatctta 30996736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Original strand, 32972912 - 32972968
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||| ||||||||||||| |||||||  ||||||||||| ||||    
T  32972912 atgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttatctt 32972968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 33296106 - 33296146
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  33296106 aagttgtcacaaagtggttgtacaaatatcatttctcttat 33296146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 36212061 - 36212121
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||||||||  ||||||||||||| |||||||  | ||||||||| |||||    
T  36212061 ataatgtgagtatgaaagataaagttgtcacaaaatggatgttcagatatcatttttctta 36212121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 4263867 - 4263925
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||||||||||| ||||||||| ||| | | |||| ||||||||||||||||    
T  4263867 ataatgtgagtatgaaagagaaagttgtcaaaaaat-gttgtacaaatatcatttctctt 4263925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 26277169 - 26277106
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||| ||||||||||||| | |||| |||||||||| || |||||||  |||||||||||||||    
T  26277169 aaaaaataatgtgagtataagagagaaagttgtcactaaatggatgttcaaatatcatttctct 26277106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 37966421 - 37966366
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||| |||  ||||||||||||| ||| |||| |||||||||||||||    
T  37966421 atgtgagtatgagagaaaaagttgtcacaaattggttgtacaaatatcatttctct 37966366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 4738607 - 4738645
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  4738607 aagttgtcacaaagtggttgtacaaatatcatttctctt 4738645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 66
Target Start/End: Original strand, 5455490 - 5455524
Alignment:
Q  32 gttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||| ||||||||||||||    
T  5455490 gttgtcacaaagtggatgtacaaatatcatttctc 5455524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 68
Target Start/End: Complemental strand, 10711792 - 10711734
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||||| |||| || |||||||||| | |||||  ||||||||||||||||    
T  10711792 taatgtgagtatgagagagaaaattgtcacaaaatagatgttcaaatatcatttctctt 10711734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 14954634 - 14954676
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttatat 72  Q
    ||||||||||||| || ||||| ||||||||||||||||||||    
T  14954634 aagttgtcacaaaatgtatgtacaaatatcatttctcttatat 14954676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 69
Target Start/End: Original strand, 33737330 - 33737396
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||| |||||||||| |||| || |||||||||| |||  ||  |||||||||||||||||    
T  33737330 aaaaacataacgtgagtatgagagagaaatttgtcacaaaatggtagttcaaatatcatttctctta 33737396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 40496418 - 40496360
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||| |||| ||||||||| ||||||||| || | |||||||| ||||    
T  40496418 ataatgtgagtatgagagagaaagttgtcaaaaagtggatttacatatatcattactct 40496360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 66
Target Start/End: Complemental strand, 42866824 - 42866762
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||| ||||||||||||||| |||  ||||||||||||| |||| ||  ||||||||||||||    
T  42866824 aaaaaataatgtgagtatgagagaaaaagttgtcacaaaatggacgttcaaatatcatttctc 42866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 44423035 - 44422981
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||||| |||||||||||| ||||||| | ||||||| |||| |||||||||||    
T  44423035 ataatgtcagtatgaaagagaaagttgttaaaaagtggttgtacaaatatcattt 44422981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 68
Target Start/End: Original strand, 2971823 - 2971876
Alignment:
Q  15 tgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||| |||| ||||||||||||| |||||||  ||||||| ||||||||    
T  2971823 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcttttctctt 2971876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 36
Target Start/End: Original strand, 11728118 - 11728151
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgt 36  Q
    |||||||||||||||||||||||||| |||||||    
T  11728118 aaaaacataatgtgagtatgaaagagaaagttgt 11728151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 65
Target Start/End: Original strand, 23352902 - 23352963
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    |||| ||||||||||||||| |||| ||||||||||||| ||| |||  || ||||||||||    
T  23352902 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggctgttcaagtatcatttct 23352963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 67
Target Start/End: Original strand, 37767801 - 37767838
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||| ||||||| ||||||||||||||||||||    
T  37767801 aagttgtcaaaaagtggttgtataaatatcatttctct 37767838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 285466 - 285530
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||| ||||||||  |||| |||||||  |||| || ||||| |||||||||||||||    
T  285466 aaaaacataatatgagtatgcgagagaaagttgttccaaaatgaatgtacaaatatcatttctct 285530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 67
Target Start/End: Complemental strand, 25086395 - 25086334
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||  |||| ||||||||| ||| | | |||| |||||||||||||||    
T  25086395 aaaacataatgtgagtatg--agagaaagttgtcataaaattgttgtacaaatatcatttctct 25086334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 30856843 - 30856807
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  30856843 aagttgtcacaaagtggttgtacaaatatcatttctc 30856807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 36435717 - 36435681
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  36435717 aagttgtcacaaagtggttgtacaaatatcatttctc 36435681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 41586664 - 41586728
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||||||| ||| |||| ||||||| ||||| ||||| | ||||| |||||||||||    
T  41586664 aaaaaataatgtgagtgtgagagagaaagttgtaacaaaatggatatttaaatgtcatttctctt 41586728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 63
Target Start/End: Complemental strand, 42372554 - 42372494
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||| ||||||||||||||| |||| |||||||||| || | |||||  |||||||||||    
T  42372554 aaaaaaataatgtgagtatgagagagaaagttgtcactaaatagatgttcaaatatcattt 42372494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 70
Target Start/End: Original strand, 5028269 - 5028329
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||| | |||| ||||||||||||| ||||||| |||||||||||||||||||    
T  5028269 taatgtgagtataagagagaaagttgtcacaaaatggatgtttaaatatcatttctcttat 5028329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 12427230 - 12427289
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| |||||||||||||| ||||||||  |||||||||||| ||||||||||||||||    
T  12427230 ataatatgagtatgaaagagaaagttgtcgaaaagtggatgtacaaatatcatttctctt 12427289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 12441592 - 12441536
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||| |||| ||||||||||||||| | |||| ||||||||||||||||    
T  12441592 atgtgagtatgagagagaaagttgtcacaaagtagttgtacaaatatcatttctctt 12441536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 31517183 - 31517243
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||  ||||||||| ||||||| |||| |||||||||||||||||    
T  31517183 ataatgtgagtatgagagaaaaagttgtcaaaaagtggttgtacaaatatcatttctctta 31517243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 1897754 - 1897695
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||| |||||| ||||| ||||||||| ||||||| |||| ||||||||||||||||    
T  1897754 ataatgtaagtatgtaagagaaagttgtcataaagtggttgtacaaatatcatttctctt 1897695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 13 - 67
Target Start/End: Original strand, 2241825 - 2241879
Alignment:
Q  13 tgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||| |||  ||||||||| ||||||| ||||||||||||||||||||    
T  2241825 tgtgagtatgagagaaaaagttgtcaaaaagtggttgtataaatatcatttctct 2241879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 28041818 - 28041880
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttatatt 73  Q
    ||||||||||||| |||  ||||||| || || ||||||| ||||||||||||||||||||||    
T  28041818 aatgtgagtatgagagaaaaagttgttaccaaatggatgtttaaatatcatttctcttatatt 28041880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 69
Target Start/End: Complemental strand, 28748175 - 28748121
Alignment:
Q  15 tgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||| |||| ||||||||||||| |||||||  |||||||||||||||||    
T  28748175 tgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctta 28748121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 12177634 - 12177577
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||| ||||||||||||| | | |||| ||||| ||||||||    
T  12177634 ataatgtgagtatgaaagagaaagttgtcacaaaatagttgtacaaataacatttctc 12177577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 33527492 - 33527435
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||| |||| |||| ||||| ||||||||| | |||||||||||||||||||    
T  33527492 ataatgtgaggatgagagagaaagttatcacaaagtagttgtataaatatcatttctc 33527435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 30945888 - 30945821
Alignment:
Q  3 aaaaacataatgtgagtatgaaag--aggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| |||||||||||||||| ||  || ||||||||||||| ||  |||||||||||||||||||||    
T  30945888 aaaatcataatgtgagtatgagagggagaaagttgtcacaaaatgattgtataaatatcatttctctt 30945821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 1196115 - 1196056
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||| | |||| ||||||||| ||||||  |||| ||||||||||||||||    
T  1196115 ataatgtgagtattagagagaaagttgtcaaaaagtgattgtacaaatatcatttctctt 1196056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 5080564 - 5080603
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  5080564 aaaaaaataatgtgagtatgaaagagaaagttgtcacaaa 5080603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 14693249 - 14693308
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    |||| ||||||||||||| |||||| ||||| ||||||| |||||||  |||||||||||    
T  14693249 aaaaaataatgtgagtatcaaagagaaagttatcacaaaatggatgttcaaatatcattt 14693308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 32149549 - 32149498
Alignment:
Q  17 agtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||| |||| ||||||||||||||||| |||| |||||| |||||||||    
T  32149549 agtatgagagagaaagttgtcacaaagtggttgtacaaatattatttctctt 32149498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 66
Target Start/End: Complemental strand, 32644686 - 32644623
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||| ||||||||||||||| |||| ||||||||| ||| | | |||| ||||||||||||||    
T  32644686 aaaaatataatgtgagtatgagagagaaagttgtcaaaaaatagttgtacaaatatcatttctc 32644623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 9200176 - 9200118
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||||| ||||||||| ||| || ||||| | |||| ||||||||    
T  9200176 ataatgtgagtatgaaagagaaagttgtcaaaaaatgaatgtacatatattatttctct 9200118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 13658906 - 13658869
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaa 41  Q
    |||| |||||||||||||||||||| ||||||||||||    
T  13658906 aaaaaataatgtgagtatgaaagagaaagttgtcacaa 13658869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 26860618 - 26860678
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||||| |||  || |||||| |||||||||||| | ||||||||||||||||    
T  26860618 ataatgtgagtatgagagaaaaa-ttgtcaaaaagtggatgtacatatatcatttctcttat 26860678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Original strand, 31883339 - 31883379
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||| ||||||| |||| ||||||||||||||||||    
T  31883339 aagttgtcaaaaagtggttgtacaaatatcatttctcttat 31883379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Original strand, 32457287 - 32457323
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  32457287 aagttgtcacaaagtggttgtacaaatatcatttctc 32457323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 70
Target Start/End: Complemental strand, 33421796 - 33421756
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    ||||||||||||| |||||||  ||||||||||||||||||    
T  33421796 aagttgtcacaaaatggatgttcaaatatcatttctcttat 33421756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 67
Target Start/End: Original strand, 6865784 - 6865848
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||| || |||||||||||| |||| ||||||||||||||||| |||| |||||||||||||||    
T  6865784 aaaaatattatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttctct 6865848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 13734363 - 13734422
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||| ||||||| |||| ||||||||||||||||    
T  13734363 ataatgtgagtatgagagagaaagttgtcataaagtggttgtacaaatatcatttctctt 13734422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 9 - 68
Target Start/End: Original strand, 33567226 - 33567285
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||| ||||    
T  33567226 ataatgtgagtatgagagagaaagttgtcacaaagtggttgtacaaatatcatttgtctt 33567285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 30334769 - 30334826
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||||||| || |||||| ||||||| |||| ||||||||||||||    
T  30334769 ataatgtgagtatgaaagagaaaattgtcataaagtggttgtacaaatatcatttctc 30334826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 68
Target Start/End: Complemental strand, 34270401 - 34270337
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| |||||| |||||||| |||| || ||||||||||||||||||  ||||||||||||||||    
T  34270401 aaaaaataatgggagtatgagagagaaaattgtcacaaagtggatgttcaaatatcatttctctt 34270337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 1839342 - 1839401
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    |||| ||||||||||||||| |||| ||||||||||||| |||||||  |||||||||||    
T  1839342 aaaaaataatgtgagtatgagagagaaagttgtcacaaaatggatgttcaaatatcattt 1839401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 5130383 - 5130438
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||| |||| ||||||||||||||| |||||| | ||||||||||||    
T  5130383 aatgtgagtatgagagagtaagttgtcacaaagtagatgtacatatatcatttctc 5130438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 11768024 - 11768063
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  11768024 gaagttgtcacaaagtggatgtacaaatatcatttctctt 11768063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 14206457 - 14206398
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| ||||||||| ||| ||| |||| ||||||||||||||||    
T  14206457 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctt 14206398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 69
Target Start/End: Original strand, 23991166 - 23991208
Alignment:
Q  27 aggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||||||||||||||| |||| |||||||||||||||||    
T  23991166 aggaagttgtcacaaagtggttgtacaaatatcatttctctta 23991208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 372717 - 372782
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||| || |||||||||||| |||| ||||||||||||| ||| |||| ||| ||||||||||||    
T  372717 aaaaatatcatgtgagtatgagagagaaagttgtcacaaaatggttgtacaaaaatcatttctctt 372782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 26660445 - 26660486
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  26660445 gaagttgtcacaaaatggatgtacaaatatcatttctcttat 26660486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 29 - 70
Target Start/End: Original strand, 26932037 - 26932078
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctcttat 70  Q
    |||||||||||||| |||||||| ||||||||||||||||||    
T  26932037 gaagttgtcacaaaatggatgtacaaatatcatttctcttat 26932078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 9 - 62
Target Start/End: Complemental strand, 29227774 - 29227721
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatt 62  Q
    ||||||||||||||| |||| ||||||||||||||| | |||| ||||||||||    
T  29227774 ataatgtgagtatgagagagaaagttgtcacaaagtagttgtacaaatatcatt 29227721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 3640194 - 3640258
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||||||||||| |||| |||||||| |||| | |||||  ||||||||||||||||    
T  3640194 aaaaaataatgtgagtatgagagagaaagttgtctcaaaatagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 63
Target Start/End: Original strand, 41865616 - 41865676
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcattt 63  Q
    ||||| |||||||||||||||||||  || |||||||||| | | ||||||||||||||||    
T  41865616 aaaaatataatgtgagtatgaaagataaaattgtcacaaaatagttgtataaatatcattt 41865676  T

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Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 68
Target Start/End: Original strand, 1774317 - 1774356
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  1774317 gaagttgtcacaaagtagatgtacaaatatcatttctctt 1774356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 4088518 - 4088479
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  4088518 aaaaatataatgtgagtatgaaagagaaagttgtcacaaa 4088479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 7287186 - 7287225
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  7287186 aaaaatataatgtgagtatgaaagagaaagttgtcacaaa 7287225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 68
Target Start/End: Complemental strand, 9226370 - 9226311
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||| |||| |||||||||  || |||||||  ||||||||||||||||    
T  9226370 ataatgtgagtatgagagagaaagttgtcattaaatggatgttcaaatatcatttctctt 9226311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Complemental strand, 16690574 - 16690535
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  16690574 aaaaatataatgtgagtatgaaagagaaagttgtcacaaa 16690535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 42
Target Start/End: Original strand, 19522000 - 19522039
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||| |||||||||||||||||||| |||||||||||||    
T  19522000 aaaaagataatgtgagtatgaaagagaaagttgtcacaaa 19522039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Original strand, 31284397 - 31284448
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatca 60  Q
    ||||| ||||||||| |||| ||||||||||||| |||||||| ||||||||    
T  31284397 ataatatgagtatgagagagaaagttgtcacaaaatggatgtacaaatatca 31284448  T

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Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 8725425 - 8725483
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||| |||| ||||||| | ||||||| |||| |||||| ||||||||    
T  8725425 ataatgtgagtatgagagagaaagttgtaataaagtggttgtacaaatataatttctct 8725483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 9581653 - 9581615
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  9581653 aaaaaataatgtgagtatgaaagagaaagttgtcacaaa 9581615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 14780456 - 14780498
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctcttatat 72  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||    
T  14780456 aagttgtcaaaaagtagatgtacaaatatcatttctcttatat 14780498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 71
Target Start/End: Complemental strand, 19127161 - 19127119
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctcttata 71  Q
    |||||||||||||||||| |||| |||||||||||||| ||||    
T  19127161 gaagttgtcacaaagtggttgtacaaatatcatttctcatata 19127119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Complemental strand, 28811465 - 28811427
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  28811465 aagttgtcacaaagtggttgtacaaatatcatttctctt 28811427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 29 - 67
Target Start/End: Original strand, 36713212 - 36713250
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  36713212 gaagttgtcacaaagtggttgtacaaatatcatttctct 36713250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 39458725 - 39458667
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    ||||||||||||||| |||| ||||||||| ||| ||| |||| | |||||||||||||    
T  39458725 ataatgtgagtatgagagagaaagttgtcaaaaactggttgtacagatatcatttctct 39458667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 40
Target Start/End: Complemental strand, 3564614 - 3564577
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcaca 40  Q
    ||||||||||| ||||||||||| ||||||||||||||    
T  3564614 aaaaacataatatgagtatgaaaaaggaagttgtcaca 3564577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 33 - 66
Target Start/End: Original strand, 12661985 - 12662018
Alignment:
Q  33 ttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||||| ||||||||||||||    
T  12661985 ttgtcacaaagtggatgtacaaatatcatttctc 12662018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 42
Target Start/End: Original strand, 13089784 - 13089817
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    |||||||||||||||||||| |||||||||||||    
T  13089784 ataatgtgagtatgaaagagaaagttgtcacaaa 13089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 66
Target Start/End: Complemental strand, 16202788 - 16202731
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||| |||| ||||||||||||| | | |||| | ||||||||||||    
T  16202788 ataatgtgagtatgagagagaaagttgtcacaaaataggtgtacatatatcatttctc 16202731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 18449297 - 18449264
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcattt 63  Q
    |||||||||||||||||||||| |||||||||||    
T  18449297 aagttgtcacaaagtggatgtacaaatatcattt 18449264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 36572765 - 36572724
Alignment:
Q  3 aaaaacataatgtgagtatgaaagaggaagttgtcacaaagt 44  Q
    ||||||||||||||||||||||||||  |||||||| |||||    
T  36572765 aaaaacataatgtgagtatgaaagagagagttgtcaaaaagt 36572724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 2117627 - 2117675
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaata 57  Q
    ||||||||||||||| |||| ||||||||||||||| | |||| |||||    
T  2117627 ataatgtgagtatgagagagaaagttgtcacaaagttgttgtacaaata 2117675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Complemental strand, 10649503 - 10649471
Alignment:
Q  10 taatgtgagtatgaaagaggaagttgtcacaaa 42  Q
    ||||||||||||||||||| |||||||||||||    
T  10649503 taatgtgagtatgaaagagaaagttgtcacaaa 10649471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 68
Target Start/End: Original strand, 15953042 - 15953106
Alignment:
Q  4 aaaacataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||| ||||||||| |||  ||||||||||||| | |||||  ||||||||||||||||    
T  15953042 aaaaaataatatgagtatgagagaaaaagttgtcacaaaatagatgttcaaatatcatttctctt 15953106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 65
Target Start/End: Original strand, 33910091 - 33910147
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttct 65  Q
    ||||||||||||||| |||| ||||||||| ||| ||| || | |||||||||||||    
T  33910091 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgaacaaatatcatttct 33910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 34381048 - 34381012
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  34381048 aagttgtcacaaagtggttgtacaaatatcatttctc 34381012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 39595308 - 39595272
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  39595308 aagttgtcacaaagtggttgtacaaatatcatttctc 39595272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 69
Target Start/End: Original strand, 31603 - 31663
Alignment:
Q  9 ataatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    ||||||||||||||| |||| ||||||||| ||| ||| |||| |||||||||||||||||    
T  31603 ataatgtgagtatgagagagaaagttgtcaaaaaatggttgtacaaatatcatttctctta 31663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 69
Target Start/End: Original strand, 29777 - 29835
Alignment:
Q  11 aatgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctta 69  Q
    |||||||| |||| | || ||||||||| ||||||| ||||||||||||||||||||||    
T  29777 aatgtgagcatgagaaagaaagttgtcaaaaagtggttgtataaatatcatttctctta 29835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 68
Target Start/End: Complemental strand, 44840 - 44784
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    |||| ||||||| |||| ||||||||||||| |||||||  ||||||||||||||||    
T  44840 atgtaagtatgagagagaaagttgtcacaaaatggatgttcaaatatcatttctctt 44784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 3277 - 3332
Alignment:
Q  12 atgtgagtatgaaagaggaagttgtcacaaagtggatgtataaatatcatttctct 67  Q
    |||||||||||| |||| ||||||| | ||||||| |||| |||||||||||||||    
T  3277 atgtgagtatgagagagaaagttgtgagaaagtggttgtacaaatatcatttctct 3332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 68
Target Start/End: Original strand, 219699 - 219737
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctctt 68  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  219699 aagttgtcacaaagtggttgtacaaatatcatttctctt 219737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 29 - 66
Target Start/End: Original strand, 11570 - 11607
Alignment:
Q  29 gaagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    |||||||||||||||| |||||| ||||||||||||||    
T  11570 gaagttgtcacaaagtagatgtacaaatatcatttctc 11607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 113661 - 113625
Alignment:
Q  30 aagttgtcacaaagtggatgtataaatatcatttctc 66  Q
    ||||||||||||||||| |||| ||||||||||||||    
T  113661 aagttgtcacaaagtggttgtacaaatatcatttctc 113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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