View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3562_high_10 (Length: 327)
Name: NF3562_high_10
Description: NF3562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3562_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 19 - 317
Target Start/End: Original strand, 32056592 - 32056890
Alignment:
| Q |
19 |
aaattagtgtatatacaacttttaggtatatcatttgatattcttaaaaattaaaatcgaataaaccattattttgatactcaaatttataagcgttgac |
118 |
Q |
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| T |
32056592 |
aaattagtgtatatacaacttttaggtatatcatttgatattcttaaaaattaaaatcgaataaactattattttgatactcaaatttataagcgttgac |
32056691 |
T |
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| Q |
119 |
cgatttaacttctttaatttatgatactaaattgtggtatattttcttgacaaacggtagtggtgtggttttgttgggtgctagatatttgtgactataa |
218 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32056692 |
cgatttaacttctttcatttatgatactaaattgtggtatattttcttgacaaacggtagtggtgtggttttgttgggtgctagatatttgtgactataa |
32056791 |
T |
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| Q |
219 |
tttcgctttattttggttatcaacttgattatgcagtgatctcggatttggttcatctacgtcgctgcttactcatattagttttgggttttttctgtg |
317 |
Q |
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||||||||||||||||||||||| ||||||||| ||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
32056792 |
tttcgctttattttggttatcaatttgattatgtagtaatttcggatttggttcatctacgtcgctgcttactcatattagttttgggttttttatgtg |
32056890 |
T |
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