View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3562_high_8 (Length: 335)
Name: NF3562_high_8
Description: NF3562
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3562_high_8 |
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Alignment Details
Target: chr6 (Bit Score: 308; Significance: 1e-173; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 7 - 318
Target Start/End: Complemental strand, 29638391 - 29638080
Alignment:
| Q |
7 |
tcgaagaatattcttgaagatcatcaaaacagtgcttgaataatgatattttttagggtacttgaagattaaaattcaaaataactacaaatctaccata |
106 |
Q |
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| T |
29638391 |
tcgaagaatattcttgaagatcatcaaaacagtgcttgaataatgatattttttagggtacttgaagattaaaattcaaaataactacaaatctaccata |
29638292 |
T |
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| Q |
107 |
tcaaaagcatgcaagagaagctcaaagattagtcacaacaaatgtagttttgtctaagaatcgatcaaagttagagttctaaaataagaagaagttgcaa |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29638291 |
tcaaaagcatgcaagagaagctcaaagattagtcacaacaaatgtagttttgtctaagaatcgatcaaagttagagttctaaaataagaagaagttgcaa |
29638192 |
T |
|
| Q |
207 |
aagttttttctaagtacgtagtacatagtttctttctcctaatataaataggatatttgttctctatgttgaggagctctctttcattctataaacttga |
306 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29638191 |
aagttttttctaagtacgtagtatatagtttctttctcctaatataaataggatatttgttctctatgttgaggagctctctttcattctataaacttga |
29638092 |
T |
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| Q |
307 |
ctactagatttc |
318 |
Q |
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|||||||||||| |
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| T |
29638091 |
ctactagatttc |
29638080 |
T |
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