View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3565_low_13 (Length: 257)

Name: NF3565_low_13
Description: NF3565
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3565_low_13
NF3565_low_13
[»] chr8 (10 HSPs)
chr8 (16-166)||(17124314-17124465)
chr8 (15-166)||(14400361-14400514)
chr8 (16-166)||(25261328-25261478)
chr8 (13-166)||(16227659-16227812)
chr8 (65-165)||(17984647-17984747)
chr8 (23-100)||(23538939-23539016)
chr8 (198-257)||(14162599-14162658)
chr8 (207-257)||(19792684-19792734)
chr8 (65-134)||(21675502-21675574)
chr8 (198-255)||(23222460-23222517)
[»] chr3 (6 HSPs)
chr3 (13-166)||(40355388-40355542)
chr3 (197-257)||(8686332-8686392)
chr3 (198-256)||(8531499-8531557)
chr3 (196-256)||(11870283-11870342)
chr3 (198-257)||(42244999-42245058)
chr3 (198-255)||(14658882-14658939)
[»] chr7 (16 HSPs)
chr7 (16-165)||(20146690-20146838)
chr7 (35-166)||(16088418-16088549)
chr7 (16-115)||(18083406-18083506)
chr7 (198-257)||(4540787-4540846)
chr7 (198-257)||(4983572-4983631)
chr7 (13-158)||(16195122-16195268)
chr7 (198-257)||(17206848-17206907)
chr7 (196-257)||(4257063-4257124)
chr7 (67-151)||(8250038-8250122)
chr7 (198-257)||(17911168-17911227)
chr7 (210-249)||(4467453-4467492)
chr7 (196-257)||(11484306-11484368)
chr7 (69-102)||(4598614-4598647)
chr7 (198-255)||(5825622-5825679)
chr7 (35-111)||(20376582-20376659)
chr7 (35-111)||(20376925-20377002)
[»] chr6 (31 HSPs)
chr6 (16-166)||(23292621-23292772)
chr6 (18-165)||(12484438-12484584)
chr6 (28-135)||(16165932-16166041)
chr6 (65-114)||(12478701-12478750)
chr6 (68-140)||(19971417-19971489)
chr6 (197-257)||(25339661-25339721)
chr6 (198-257)||(18992814-18992873)
chr6 (66-165)||(24216851-24216949)
chr6 (197-257)||(15171765-15171825)
chr6 (194-257)||(18973207-18973271)
chr6 (198-254)||(25031661-25031717)
chr6 (198-257)||(3923249-3923308)
chr6 (198-257)||(17794384-17794443)
chr6 (198-257)||(18779680-18779739)
chr6 (198-255)||(4205805-4205862)
chr6 (197-257)||(13217745-13217805)
chr6 (197-253)||(15161758-15161814)
chr6 (197-253)||(15471592-15471648)
chr6 (200-255)||(12660910-12660965)
chr6 (198-257)||(18627006-18627065)
chr6 (194-257)||(24393360-24393423)
chr6 (197-255)||(19613222-19613280)
chr6 (210-255)||(4740561-4740606)
chr6 (198-255)||(18400080-18400137)
chr6 (198-255)||(19993163-19993220)
chr6 (197-250)||(25923835-25923888)
chr6 (224-257)||(26821480-26821513)
chr6 (228-257)||(28734577-28734606)
chr6 (200-252)||(17739221-17739273)
chr6 (13-116)||(23295401-23295503)
chr6 (195-255)||(28221979-28222039)
[»] scaffold0111 (1 HSPs)
scaffold0111 (16-146)||(35529-35658)
[»] scaffold0161 (1 HSPs)
scaffold0161 (18-116)||(4803-4900)
[»] chr4 (9 HSPs)
chr4 (22-145)||(19075883-19076007)
chr4 (198-257)||(5514092-5514151)
chr4 (198-257)||(33331504-33331563)
chr4 (197-254)||(11922874-11922931)
chr4 (198-239)||(12346417-12346458)
chr4 (200-257)||(22181476-22181533)
chr4 (197-257)||(9488821-9488883)
chr4 (65-114)||(18421018-18421067)
chr4 (16-116)||(12452951-12453048)
[»] scaffold0123 (1 HSPs)
scaffold0123 (196-257)||(13731-13792)
[»] chr5 (9 HSPs)
chr5 (36-166)||(20846724-20846856)
chr5 (197-257)||(16676674-16676734)
chr5 (210-257)||(22170374-22170421)
chr5 (197-256)||(31414219-31414278)
chr5 (197-257)||(24164576-24164636)
chr5 (198-257)||(24143658-24143717)
chr5 (196-255)||(31758586-31758645)
chr5 (211-257)||(12410118-12410164)
chr5 (65-134)||(26724875-26724946)
[»] chr1 (8 HSPs)
chr1 (197-257)||(16148901-16148961)
chr1 (198-257)||(23298415-23298474)
chr1 (198-257)||(25405451-25405509)
chr1 (198-257)||(26191797-26191856)
chr1 (198-257)||(13799902-13799961)
chr1 (197-255)||(8648403-8648461)
chr1 (198-255)||(28764331-28764388)
chr1 (201-257)||(16382521-16382577)
[»] scaffold0074 (2 HSPs)
scaffold0074 (194-257)||(23240-23303)
scaffold0074 (198-257)||(54368-54427)
[»] chr2 (12 HSPs)
chr2 (198-257)||(19124764-19124823)
chr2 (13-145)||(17739078-17739210)
chr2 (200-253)||(24321382-24321435)
chr2 (18-133)||(27498252-27498367)
chr2 (18-146)||(18928254-18928383)
chr2 (197-257)||(23257515-23257575)
chr2 (198-257)||(20109378-20109437)
chr2 (199-255)||(21897-21953)
chr2 (197-257)||(20851798-20851858)
chr2 (199-257)||(19013464-19013522)
chr2 (197-255)||(25337598-25337656)
chr2 (65-102)||(23781451-23781488)
[»] scaffold0186 (1 HSPs)
scaffold0186 (32-114)||(10624-10704)
[»] scaffold0032 (1 HSPs)
scaffold0032 (65-145)||(80296-80377)
[»] scaffold0115 (1 HSPs)
scaffold0115 (16-166)||(41559-41705)
[»] scaffold0011 (1 HSPs)
scaffold0011 (197-257)||(172312-172372)
[»] scaffold0035 (1 HSPs)
scaffold0035 (69-103)||(64538-64572)
[»] scaffold0088 (1 HSPs)
scaffold0088 (200-257)||(37924-37981)
[»] scaffold0001 (1 HSPs)
scaffold0001 (224-257)||(520352-520385)
[»] scaffold1559 (1 HSPs)
scaffold1559 (198-250)||(979-1031)
[»] scaffold0038 (1 HSPs)
scaffold0038 (195-255)||(22477-22537)


Alignment Details
Target: chr8 (Bit Score: 100; Significance: 1e-49; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 17124314 - 17124465
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaa-tctcaacaaactgagtgata 114  Q
    |||||||||||| ||||  ||||||| ||| |||||||||||| |||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  17124314 atctcatcaacagataaataaaatctccaaagtagccatgccacatatatcatcatacatcaccaaaataaatctccaaatctcaacaaactgagtgata 17124413  T
Q  115 aatctcataaagtcataaaaaataaataacaacagacagacatcctaatcag 166  Q
    |||||||||||||||||||| |||| |||||| |||||||||||||||||||    
T  17124414 aatctcataaagtcataaaacataactaacaaaagacagacatcctaatcag 17124465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 166
Target Start/End: Complemental strand, 14400514 - 14400361
Alignment:
Q  15 tatctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctcc-aatctcaacaaactgagtgat 113  Q
    ||||||||||||||||||||||||| |  || ||||||||| || |||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  14400514 tatctcatcaacatataataaaaatatctaaagtagccatgtcacatatctcataatacatcaccaaaataaatctccaaatctcaacaaattgagtgat 14400415  T
Q  114 aaatctcataaagtcataaaaa-ataaataacaacagacagacatcctaatcag 166  Q
    ||||||||||| || ||||||| ||||| ||||||||||| ||||| |||||||    
T  14400414 aaatctcataatgtgataaaaacataaaaaacaacagacatacatcataatcag 14400361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 25261328 - 25261478
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgataa 115  Q
    ||||||| |||| ||||||||||||| ||| ||||||||| ||  ||| ||||||||||||||||||||||||||||||||| || | ||| | ||||||    
T  25261328 atctcattaacagataataaaaatctacaaagtagccatgacatgtatctcataatacatcaccaaaataaatctccaatctgaatatactaaatgataa 25261427  T
Q  116 atctcataaagtcataaaaaataaataacaacagacagacatcctaatcag 166  Q
    ||||||||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  25261428 atctcataaagacataaaacataaataacgacagacatacatcctaatcag 25261478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 13 - 166
Target Start/End: Original strand, 16227659 - 16227812
Alignment:
Q  13 aatatctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtga 112  Q
    ||||| ||||||||| ||||||||| |||  ||| ||| ||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  16227659 aatatatcatcaacagataataaaa-tctctaag-tagacatgccacatatatcataatacatcaccaaaataaatctccaatctcaacatactgagtga 16227756  T
Q  113 taaatctcataaagtcataaaaa-ataaataaca-acagacagacatcctaatcag 166  Q
    ||||||||||||||||||||||| ||||| |||| ||| ||| |||||||||||||    
T  16227757 taaatctcataaagtcataaaaacataaacaacagacaaacatacatcctaatcag 16227812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 165
Target Start/End: Complemental strand, 17984747 - 17984647
Alignment:
Q  65 tcataatacatcaccaaaataaatctccaa-tctcaacaaactgagtgataaatctcataaagtcataaaaaataaataacaacagacagacatcctaat 163  Q
    ||||||||||  |||||||||||||||||| |||||||||||||| |||| |||||||| ||||||||||| ||||||||| | ||||||||||| ||||    
T  17984747 tcataatacaagaccaaaataaatctccaaatctcaacaaactgaatgatgaatctcatgaagtcataaaacataaataacta-agacagacatcttaat 17984649  T
Q  164 ca 165  Q
    ||    
T  17984648 ca 17984647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 23 - 100
Target Start/End: Original strand, 23538939 - 23539016
Alignment:
Q  23 caacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaa 100  Q
    ||||| |||| | |||||| ||| ||||||||| || |||| ||||||||||||||||||||||| ||| ||||||||    
T  23538939 caacagataaaataaatctccaaagtagccatgtcacatatatcataatacatcaccaaaataaaactcaaatctcaa 23539016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 14162658 - 14162599
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   |||||||||| |||||||||||||||| ||||||    
T  14162658 tgatgagtcaataattagtgttttaaatatattattcgagtctattttatttaaatttta 14162599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 207 - 257
Target Start/End: Complemental strand, 19792734 - 19792684
Alignment:
Q  207 ataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||  |||| | ||||||||||||||||||||||||||| ||||||    
T  19792734 ataaattatcgtttttaatatattatttgagtctattttatttaaatttta 19792684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 21675502 - 21675574
Alignment:
Q  65 tcataatacatcaccaaaataaatctccaatctcaacaaactgagtgat---aaatctcataaagtcataaaa 134  Q
    ||||||||||| ||||| ||||| |||||||||||||| ||| ||||||   ||||||||  |||||||||||    
T  21675502 tcataatacatgaccaagataaaactccaatctcaacatactcagtgattaaaaatctcaacaagtcataaaa 21675574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 23222517 - 23222460
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  ||||||||||| | ||||| ||||||||||  ||||||||||||||    
T  23222517 tgatgagtcaataattagtgtttttaatataatatttgagtccgttttatttagattt 23222460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 99; Significance: 6e-49; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 166
Target Start/End: Complemental strand, 40355542 - 40355388
Alignment:
Q  13 aatatctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtg- 111  Q
    ||||||||||||| | ||||||||||||||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||||| | ||||||     
T  40355542 aatatctcatcaaaaaataataaaaatcttcaaagtagtcatgccacatatctcataatacatcaccaaaataaatctccaatctcaacatattgagtga 40355443  T
Q  112 ataaatctcataaagtcataaaaaataaataacaacagacagacatcctaatcag 166  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||| |||||||    
T  40355442 ataaatctcataaagtcataaaatgtaaataacaacagacaaacatcataatcag 40355388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 8686392 - 8686332
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| || |||||||    
T  8686392 ttgatgagtcataaattagtgttttttatatattatttgagtctgttttaatttgatttta 8686332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 198 - 256
Target Start/End: Original strand, 8531499 - 8531557
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttt 256  Q
    ||||||||||  ||||| ||||| | ||||||||||| |||||||||||||||||||||    
T  8531499 tgatgagtcaataattaatgtttttaatatattatttcagtctattttatttagatttt 8531557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 256
Target Start/End: Complemental strand, 11870342 - 11870283
Alignment:
Q  196 attgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttt 256  Q
    ||||||||||||| ||||||||||| | ||| ||||||||||||| |||| ||||||||||    
T  11870342 attgatgagtcattaattagtgtttttaatagattatttgagtct-ttttttttagatttt 11870283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 42245058 - 42244999
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   |||||||||| |||||||||||||||| ||||||    
T  42245058 tgatgagtcaataattagtgttttaaatatattattcgagtctattttatttaaatttta 42244999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 14658882 - 14658939
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  ||||||||||| | ||||| ||||||| ||| ||||||||||||||    
T  14658882 tgatgagtcaataattagtgtttttaatataatatttgaatctgttttatttagattt 14658939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 20146690 - 20146838
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgataa 115  Q
    |||||||||||| ||||||||| ||| |||  ||||||||||| |||| ||||||||||| || ||||||||||| ||||||||||| ||||||||||||    
T  20146690 atctcatcaacagataataaaa-tctccaaattagccatgccacatatatcataatacattacaaaaataaatcttcaatctcaacatactgagtgataa 20146788  T
Q  116 atctcataaagtcataaaaaataaataacaacagacagacatcctaatca 165  Q
    || |||| ||||||||||| ||||||||||| | ||||||||||||||||    
T  20146789 atttcatgaagtcataaaacataaataacaaaacacagacatcctaatca 20146838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 16088418 - 16088549
Alignment:
Q  35 aaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgataaatctcataaagtcataaaa 134  Q
    ||||||| ||| ||| |||||||| |||| || ||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||| |||||||||    
T  16088418 aaaatctccaaagtatccatgccacatatctcgtaatacatcaccaaattaaatctccaatctcaacatactgagtggtaaatctcataaggtcataaaa 16088517  T
Q  135 aataaataacaacagacagacatcctaatcag 166  Q
     ||||||| ||||||||||||| |||||||||    
T  16088518 cataaatatcaacagacagacaccctaatcag 16088549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 16 - 115
Target Start/End: Complemental strand, 18083506 - 18083406
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaa-ataaatctccaatctcaacaaactgagtgata 114  Q
    |||| ||||||| |||||||||||| |||| |||| ||||| |||||| |||||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  18083506 atcttatcaacagataataaaaatcctcaaagtagtcatgcaaaatatatcataatacatcaccaaatataaatctcaaatctcaacatactgagtgata 18083407  T
Q  115 a 115  Q
    |    
T  18083406 a 18083406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 4540787 - 4540846
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  4540787 tgatgagtcaataattagtgtttttaatatattatttgagtctattttatttagatttta 4540846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 4983631 - 4983572
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  4983631 tgatgagtcaataattagtgtttttgatatattatttgagtctattttatttagatttta 4983572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 158
Target Start/End: Original strand, 16195122 - 16195268
Alignment:
Q  13 aatatctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcacc-aaaataaatctccaatctcaacaaactgagtg 111  Q
    |||||||||||||||  |||  ||||||| |||| | | |||| || ||||  |||||||||||||| |||| |||||| |||||||| || ||||||||    
T  16195122 aatatctcatcaacaattaaataaaatctccaagtt-gtcatgtcacatataccataatacatcacccaaaaaaaatcttcaatctcagcatactgagtg 16195220  T
Q  112 a-taaatctcataaagtcataaaaaataaataacaacagacagacatc 158  Q
    | |||||||||||||||||||||| ||||| ||  ||||||| |||||    
T  16195221 aataaatctcataaagtcataaaatataaacaatgacagacaaacatc 16195268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 17206907 - 17206848
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   ||||||||||||||||||||||||||||||||||    
T  17206907 tgatgagtcaataattagtgttttaaatatattatttgagtctattttatttagatttta 17206848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 4257124 - 4257063
Alignment:
Q  196 attgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||||  |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  4257124 attgatgagtcaataattagtgttttaaatatattatttgagtttattttatttagatttta 4257063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 8250038 - 8250122
Alignment:
Q  67 ataatacatcaccaaaataaatctccaatctcaacaaactgagtgataaatctcataaagtcataaaaaataaataacaacagac 151  Q
    ||||||||||||||||  |||||| ||||||||||| | ||||| | ||||||||||||| ||| |||| ||||| |||| ||||    
T  8250038 ataatacatcaccaaataaaatcttcaatctcaacataatgagtaacaaatctcataaagacattaaaagtaaatgacaaaagac 8250122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 17911168 - 17911227
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||| ||||||||||| | |||  |||||||||| ||||||||||||||||||    
T  17911168 tgatgagtcattaattagtgtttttaataggttatttgagtttattttatttagatttta 17911227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Complemental strand, 4467492 - 4467453
Alignment:
Q  210 aattagtgtttgttatatattatttgagtctattttattt 249  Q
    ||||||||||| | ||||||||||||||||||||||||||    
T  4467492 aattagtgtttttaatatattatttgagtctattttattt 4467453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 196 - 257
Target Start/End: Complemental strand, 11484368 - 11484306
Alignment:
Q  196 attgatgagtcataaattagtgtttgtt-atatattatttgagtctattttatttagatttta 257  Q
    ||||||||||||  ||||||||||| || ||||| ||||| ||| ||||||||||||||||||    
T  11484368 attgatgagtcaataattagtgtttttttatataatatttaagtttattttatttagatttta 11484306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 69 - 102
Target Start/End: Complemental strand, 4598647 - 4598614
Alignment:
Q  69 aatacatcaccaaaataaatctccaatctcaaca 102  Q
    ||||||||||| ||||||||||||||||||||||    
T  4598647 aatacatcacccaaataaatctccaatctcaaca 4598614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 5825622 - 5825679
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  ||||||||||| | ||||| ||||||||||| ||||||||| ||||    
T  5825622 tgatgagtcaataattagtgtttttaatataatatttgagtctgttttatttatattt 5825679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 20376659 - 20376582
Alignment:
Q  35 aaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaa-ataaatctccaatctcaacaaactgagtg 111  Q
    ||||||| |||  ||||||| ||| || | |||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  20376659 aaaatctccaaaatagccattccacatgtatcataatacatcaccaaatataaatctcaagtctcaacatactgagtg 20376582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 20377002 - 20376925
Alignment:
Q  35 aaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaa-ataaatctccaatctcaacaaactgagtg 111  Q
    ||||||| |||  ||||||| ||| || | |||||||||||||||||| ||||||||| | |||||||| ||||||||    
T  20377002 aaaatctccaaaatagccattccacatgtatcataatacatcaccaaatataaatctcaagtctcaacatactgagtg 20376925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 166
Target Start/End: Original strand, 23292621 - 23292772
Alignment:
Q  16 atctcatcaacatataataaaaat-cttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgata 114  Q
    |||||||||||| ||||||| ||| || ||||||||||||| || |||| |||||||||||||| ||||||||||  |||||||| || ||||||||||     
T  23292621 atctcatcaacagataataagaattctccaaggtagccatgacacatatctcataatacatcactaaaataaatcctcaatctcatcatactgagtgatt 23292720  T
Q  115 aatctcataaagtcataaaaaataaataacaacagacagacatcctaatcag 166  Q
    |||||||||||| ||||||| ||||||||| ||||||| |||||||||||||    
T  23292721 aatctcataaagacataaaacataaataacgacagacatacatcctaatcag 23292772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 12484438 - 12484584
Alignment:
Q  18 ctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtg-ataaa 116  Q
    |||||||||||||||||||| ||| ||| |||||||||||| |||   ||||||||||||||||||||||||||||||||||||| | |||||| |||||    
T  12484438 ctcatcaacatataataaaa-tctccaaagtagccatgccacataaa-cataatacatcaccaaaataaatctccaatctcaacatattgagtgaataaa 12484535  T
Q  117 tctcataaagtcataaaaaataaataacaacagacagacatcctaatca 165  Q
    |||| |||||||||||   ||||||||| ||||||| ||||| ||||||    
T  12484536 tctcgtaaagtcataaggtataaataacgacagacatacatcataatca 12484584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 16166041 - 16165932
Alignment:
Q  28 tataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctcc-aatctcaacaaactgagtgat-aaatctcataaa 125  Q
    |||||||||||||| ||| |||||||||||| |||| |||||||||||||||||||||||| ||| |||||||| |||||| ||||| ||||||||| |     
T  16166041 tataataaaaatctccaaagtagccatgccacatatatcataatacatcaccaaaataaatttccaaatctcaataaactgggtgataaaatctcatcat 16165942  T
Q  126 gtcataaaaa 135  Q
    ||||||||||    
T  16165941 gtcataaaaa 16165932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 12478750 - 12478701
Alignment:
Q  65 tcataatacatcaccaaaataaatctccaatctcaacaaactgagtgata 114  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  12478750 tcataatacatcaccaaaataaatctccaatctcaacatgctgagtgata 12478701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 19971489 - 19971417
Alignment:
Q  68 taatacatcaccaaaataaatctccaatctcaacaaactgagtgataaatctcataaagtcataaaaaataaa 140  Q
    |||||||||||||||  ||||||||||||||| |||  ||||||| ||||||||||||| ||| |||||||||    
T  19971489 taatacatcaccaaataaaatctccaatctcatcaatatgagtgaaaaatctcataaagacatgaaaaataaa 19971417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 25339721 - 25339661
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||  |||||||||||   ||||||||||||||||||||||||||||||||||    
T  25339721 ttgatgagtcaataattagtgttttaaatatattatttgagtctattttatttagatttta 25339661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 18992814 - 18992873
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   ||||||||||||||||||||||||||||||||||    
T  18992814 tgatgagtcaataattagtgttttaaatatattatttgagtctattttatttagatttta 18992873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 66 - 165
Target Start/End: Original strand, 24216851 - 24216949
Alignment:
Q  66 cataatacatcaccaaaataaatctccaatctcaacaaactgagtgataaatctcataaagtcataaaaaataaataacaacagacagacatcctaatca 165  Q
    |||||||||| ||||||  ||||||| |||||||||| | ||||||| ||||||||||||| ||||||||| |||  |||| |||| |||| ||||||||    
T  24216851 cataatacataaccaaataaaatctcaaatctcaacataatgagtgacaaatctcataaagacataaaaaa-aaacgacaaaagaccgacaccctaatca 24216949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 15171765 - 15171825
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||| | ||||| ||| | ||| ||||||||||||||||||||||||||||||    
T  15171765 ttgatgagtcattatttagtatttttaatagattatttgagtctattttatttagatttta 15171825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Original strand, 18973207 - 18973271
Alignment:
Q  194 taattgatgagtcataaattagtgtttgttatatattatttgagt-ctattttatttagatttta 257  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| | |  ||||||||||||||||    
T  18973207 taattgatgagtcataaattagtattttttatatattatttgattccctttttatttagatttta 18973271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 198 - 254
Target Start/End: Complemental strand, 25031717 - 25031661
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatt 254  Q
    ||||||||||  |||||||| || | |||||||||||||||||||||||||||||||    
T  25031717 tgatgagtcaataattagtgattttaatatattatttgagtctattttatttagatt 25031661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 3923249 - 3923308
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  || || ||||| | ||||||||||||||||||||||||||||||||||    
T  3923249 tgatgagtcaataactaatgtttttaatatattatttgagtctattttatttagatttta 3923308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 17794443 - 17794384
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||| || |||||||||||    
T  17794443 tgatgagtcaataattagtgtttttaatatattatttgagtctatgttgtttagatttta 17794384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 18779680 - 18779739
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||| ||||||||||| | |||   ||||||||||||||||||||||||||||    
T  18779680 tgatgagtcattaattagtgtttttaataggatatttgagtctattttatttagatttta 18779739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 4205805 - 4205862
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  ||||||||||| ||||||| ||||| ||| ||||||||||||||||    
T  4205805 tgatgagtcaataattagtgttttttatataatatttaagtttattttatttagattt 4205862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 13217805 - 13217745
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||| |  ||||||||||| | ||||||||||||||||  ||||||||||||||||    
T  13217805 ttgatgagttaataattagtgtttttaatatattatttgagtcagttttatttagatttta 13217745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Original strand, 15161758 - 15161814
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagat 253  Q
    |||||||||||| | ||||||||| | ||| ||||||| ||||||||||||||||||    
T  15161758 ttgatgagtcattatttagtgtttttaatagattatttaagtctattttatttagat 15161814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 253
Target Start/End: Complemental strand, 15471648 - 15471592
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagat 253  Q
    |||| ||||||| | ||||||||| | ||| ||||||||||||||||||||||||||    
T  15471648 ttgacgagtcattatttagtgtttttaatagattatttgagtctattttatttagat 15471592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 255
Target Start/End: Complemental strand, 12660965 - 12660910
Alignment:
Q  200 atgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||  ||||||||||| ||||||| ||||| ||| ||||||||||||||||    
T  12660965 atgagtcaataattagtgttttttatataatatttaagtttattttatttagattt 12660910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 18627006 - 18627065
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   ||||||||||||||| || |||||||||||||||    
T  18627006 tgatgagtcaataattagtgttttaaatatattatttgagtgtaatttatttagatttta 18627065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 24393423 - 24393360
Alignment:
Q  194 taattgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||||||||||||||||| | ||||||||||| | | ||  ||||||||| ||||||    
T  24393423 taattgatgagtcataaattagtgtgttttatatattatctaattcccttttatttatatttta 24393360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 19613280 - 19613222
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    |||||||||||   |||||||||| ||||||| ||||| ||| ||||||||||||||||    
T  19613280 ttgatgagtcaattattagtgttttttatataatatttaagtttattttatttagattt 19613222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 255
Target Start/End: Original strand, 4740561 - 4740606
Alignment:
Q  210 aattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||| ||||||| ||||| ||| ||||||||||||||||    
T  4740561 aattagtgttttttatataatatttaagtttattttatttagattt 4740606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 18400137 - 18400080
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  |||||||| || | ||||| ||||||||| ||||||||||||||||    
T  18400137 tgatgagtcaataattagtgattttaatataatatttgagtttattttatttagattt 18400080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Original strand, 19993163 - 19993220
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  ||||||||||| | ||||| ||||||||||| ||||||||| ||||    
T  19993163 tgatgagtcaataattagtgtttttaatataatatttgagtctgttttatttatattt 19993220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 25923888 - 25923835
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttattta 250  Q
    |||||||||||  ||||||||||| | ||||| ||||||||||| |||||||||    
T  25923888 ttgatgagtcaataattagtgtttttaatataatatttgagtctgttttattta 25923835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 26821480 - 26821513
Alignment:
Q  224 atatattatttgagtctattttatttagatttta 257  Q
    ||||||||||||||| ||||||||||||||||||    
T  26821480 atatattatttgagtatattttatttagatttta 26821513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 228 - 257
Target Start/End: Complemental strand, 28734606 - 28734577
Alignment:
Q  228 attatttgagtctattttatttagatttta 257  Q
    ||||||||||||||||||||||||||||||    
T  28734606 attatttgagtctattttatttagatttta 28734577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 17739221 - 17739273
Alignment:
Q  200 atgagtcataaattagtgtttgttatatattatttgagtctattttatttaga 252  Q
    ||||||| | ||||||||||| ||||||| ||||| ||| |||||||||||||    
T  17739221 atgagtcgttaattagtgttttttatataatatttaagtttattttatttaga 17739273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 116
Target Start/End: Complemental strand, 23295503 - 23295401
Alignment:
Q  13 aatatctcatcaacatataa-taaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtg 111  Q
    ||||||||||||||| |||| ||||||||| |||| |||| |||||| ||| | |||||||||||  || |||||||||  || ||||||| | ||||||    
T  23295503 aatatctcatcaacagataaataaaaatctccaag-tagctatgccacataat-cataatacatctacagaataaatctgaaacctcaacatattgagtg 23295406  T
Q  112 ataaa 116  Q
    |||||    
T  23295405 ataaa 23295401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 28222039 - 28221979
Alignment:
Q  195 aattgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    |||||||||||||  ||||||||||| | || || ||||||||||  ||||||||||||||    
T  28222039 aattgatgagtcaataattagtgtttttaatgtaatatttgagtccgttttatttagattt 28221979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 35658 - 35529
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgataa 115  Q
    ||||||||||||  |||  |||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  35658 atctcatcaacagttaaataaaatcttcaag-tatccatgccacatatatcataatacatcaccaaaataaatctctaatctcaacaaactgggtgataa 35560  T
Q  116 atctcataaagtcataaaaaataaataacaa 146  Q
    ||||||||||||||| ||| |||||||||||    
T  35559 atctcataaagtcatgaaacataaataacaa 35529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 116
Target Start/End: Complemental strand, 4900 - 4803
Alignment:
Q  18 ctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgataaa 116  Q
    |||| ||||| ||||||||| ||| ||| |||| ||||||| |||  ||||| |||||||||||||||||||| ||||||||||| |||||||||||||    
T  4900 ctcaacaacacataataaaa-tctccaaagtagtcatgccacataaatcatagtacatcaccaaaataaatcttcaatctcaacatactgagtgataaa 4803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 6e-18; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 145
Target Start/End: Original strand, 19075883 - 19076007
Alignment:
Q  22 tcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtga--taaatct 119  Q
    |||||| ||||||||||||| ||| ||||| ||| |||| | | ||| ||||||||||||||||||||||||||||||||| ||| |||||   ||||||    
T  19075883 tcaacagataataaaaatctccaaagtagctatgtcaaacaat-catgatacatcaccaaaataaatctccaatctcaacatactaagtgaataaaatct 19075981  T
Q  120 cataaagtcataaaaaataaataaca 145  Q
    ||  |||||||||||  |||||||||    
T  19075982 caacaagtcataaaatgtaaataaca 19076007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 5514151 - 5514092
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||| |||| ||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  5514151 tgatgaatcattaattagtgttttttatatattatttgagtctgttttatttagatttta 5514092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 33331563 - 33331504
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  33331563 tgatgagtcaataattagtgtttttaatatattatttgagtctattttatttagatttta 33331504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 11922931 - 11922874
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatt 254  Q
    |||||||||||  |||||||| || | ||||| |||||||||||||||||||||||||    
T  11922931 ttgatgagtcaataattagtgattttaatataatatttgagtctattttatttagatt 11922874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 12346458 - 12346417
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtc 239  Q
    ||||||||||| ||||||||||| ||||||||||||||||||    
T  12346458 tgatgagtcatcaattagtgttttttatatattatttgagtc 12346417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 257
Target Start/End: Complemental strand, 22181533 - 22181476
Alignment:
Q  200 atgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||| ||||||||||| | ||| ||||||||||| | ||||||||||||||||    
T  22181533 atgagtcattaattagtgtttttaatagattatttgagtgtgttttatttagatttta 22181476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 9488883 - 9488821
Alignment:
Q  197 ttgatgagtcataaattagtgtttgtt--atatattatttgagtctattttatttagatttta 257  Q
    |||||||||||| |||| |||||| ||  ||||||||||||||| | ||||||||||||||||    
T  9488883 ttgatgagtcattaattggtgttttttttatatattatttgagtgtgttttatttagatttta 9488821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 18421067 - 18421018
Alignment:
Q  65 tcataatacatcaccaaaataaatctccaatctcaacaaactgagtgata 114  Q
    ||||||||| ||||||||  |||| ||||||||||||| |||||||||||    
T  18421067 tcataatacttcaccaaataaaatatccaatctcaacatactgagtgata 18421018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 116
Target Start/End: Complemental strand, 12453048 - 12452951
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgataa 115  Q
    ||||||||||||  ||| |||||||| |||| ||||||||||| ||| | ||||||||||| ||||| |||||||   | ||||||| ||||||||||||    
T  12453048 atctcatcaacagttaaaaaaaatctacaag-tagccatgccacataat-cataatacatctccaaa-taaatctgacacctcaacatactgagtgataa 12452952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 196 - 257
Target Start/End: Original strand, 13731 - 13792
Alignment:
Q  196 attgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  13731 attgatgagtcaataattagtgtttttaatatattatttgagtctattttatttagatttta 13792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 1e-16; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 20846856 - 20846724
Alignment:
Q  36 aaatcttcaaggtagccatgccaaatatttcataatacatcacc-aaaataaatctccaatctcaacaaactgagtgat-aaatctcataaagtcataaa 133  Q
    |||||||||| |||||||||||| | || ||| ||||||||||| ||||||||| || |||||||||| |||||||||| |||| ||||| || ||||||    
T  20846856 aaatcttcaaagtagccatgccatagatatcacaatacatcaccaaaaataaatatctaatctcaacatactgagtgataaaatttcatacagacataaa 20846757  T
Q  134 aaataaataacaacagacagacatcctaatcag 166  Q
    | ||||  ||| || |||| | |||||||||||    
T  20846756 atataagcaacgacggacatatatcctaatcag 20846724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 16676674 - 16676734
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||  |||||||| || | |||||||| |||||||||||||||||||||||||    
T  16676674 ttgatgagtcaataattagtgattttaatatattagttgagtctattttatttagatttta 16676734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 210 - 257
Target Start/End: Original strand, 22170374 - 22170421
Alignment:
Q  210 aattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||| | |||||||||||||||||||||||| |||||||||    
T  22170374 aattagtgtttttaatatattatttgagtctattttatatagatttta 22170421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 197 - 256
Target Start/End: Original strand, 31414219 - 31414278
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttt 256  Q
    |||||||||||  ||||| |||||   |||||||||||||||||||||||||||||||||    
T  31414219 ttgatgagtcaataattaatgttttaaatatattatttgagtctattttatttagatttt 31414278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 24164576 - 24164636
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||| | ||||||||| | |||  |||||||||| ||||||||||||||||||    
T  24164576 ttgatgagtcattatttagtgtttttaataggttatttgagtttattttatttagatttta 24164636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 24143717 - 24143658
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||| |||||||   |||||||||||||||||||||||| |||||||||    
T  24143717 tgatgagtcaataataagtgttttaaatatattatttgagtctattttatctagatttta 24143658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 31758645 - 31758586
Alignment:
Q  196 attgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||||  ||||||||||| | ||||| ||||||||||| ||||||||| ||||    
T  31758645 attgatgagtcaataattagtgtttttaatataatatttgagtctgttttatttatattt 31758586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 257
Target Start/End: Original strand, 12410118 - 12410164
Alignment:
Q  211 attagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||   |||||| |||||||||||||||||||||||||||    
T  12410118 attagtgttttaaatatatcatttgagtctattttatttagatttta 12410164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 134
Target Start/End: Original strand, 26724875 - 26724946
Alignment:
Q  65 tcataatacatcaccaaaataaatctccaatctcaacaaactgagtgat--aaatctcataaagtcataaaa 134  Q
    |||||||||||||||| |||||||||   ||||||||| || |||||||  ||||||||  |||||||||||    
T  26724875 tcataatacatcaccataataaatctaacatctcaacataccgagtgataaaaatctcaacaagtcataaaa 26724946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 16148961 - 16148901
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  16148961 ttgatgagtcaataattagtgtttttaatatattatttgagtctattttatttagatttta 16148901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 23298415 - 23298474
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  23298415 tgatgagtcaataattagtgtttttaatatattatttgagtctattttatttagatttta 23298474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 25405509 - 25405451
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| ||||||||||||||||| || |||||||||||||||    
T  25405509 tgatgagtcaataattagtgttttttatatattatttgagt-tagtttatttagatttta 25405451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Original strand, 26191797 - 26191856
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||| ||||||||||| | ||| ||||||||||| | ||||||||||||||||    
T  26191797 tgatgagtcattaattagtgtttttaatagattatttgagtatgttttatttagatttta 26191856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 13799961 - 13799902
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   |||||||||| |||||||||||||||| ||||||    
T  13799961 tgatgagtcaataattagtgttttaaatatattattcgagtctattttatttaaatttta 13799902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Original strand, 8648403 - 8648461
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    |||||||||||| ||||||||| | |||| || ||||| ||| ||||||||||||||||    
T  8648403 ttgatgagtcattaattagtgtcttttatttaatatttaagtttattttatttagattt 8648461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 255
Target Start/End: Complemental strand, 28764388 - 28764331
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    ||||||||||  ||||||||||| | ||||| ||||||||||  ||||||||||||||    
T  28764388 tgatgagtcaataattagtgtttttaatataatatttgagtccgttttatttagattt 28764331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 257
Target Start/End: Complemental strand, 16382577 - 16382521
Alignment:
Q  201 tgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||  ||||||||||| | |||||||||||||||   ||||||||||||||||    
T  16382577 tgagtcaataattagtgtttttaatatattatttgagttagttttatttagatttta 16382521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 194 - 257
Target Start/End: Complemental strand, 23303 - 23240
Alignment:
Q  194 taattgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||||||||||||||| ||| ||||||||||||||| ||  ||||||||||||||||    
T  23303 taattgatgagtcataaattagtattttttatatattatttgattcccttttatttagatttta 23240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 54427 - 54368
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   ||||||||||||||||||||||||||| ||||||    
T  54427 tgatgagtcaataattagtgttttaaatatattatttgagtctattttatttatatttta 54368  T

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Target: chr2 (Bit Score: 44; Significance: 4e-16; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 19124823 - 19124764
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||||    
T  19124823 tgatgagtcaataattagtgtttttaatatattatttgagtctattttatttagatttta 19124764  T

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Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 13 - 145
Target Start/End: Original strand, 17739078 - 17739210
Alignment:
Q  13 aatatctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctcc-aatctcaacaaactgagtg 111  Q
    ||||||||| |||||||||| ||||  || ||| ||||||||| || ||| | |||| ||||||| |||||||||||||| ||||||||| |||||||||    
T  17739078 aatatctcaacaacatataacaaaatcctccaaagtagccatgtcacataat-catactacatcaacaaaataaatctccaaatctcaac-aactgagtg 17739175  T
Q  112 -ataaatctcataaagtcataaaaaataaataaca 145  Q
     |||| ||| ||||||||||||||  |||||||||    
T  17739176 aataagtcttataaagtcataaaatgtaaataaca 17739210  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 24321382 - 24321435
Alignment:
Q  200 atgagtcataaattagtgtttgttatatattatttgagtctattttatttagat 253  Q
    ||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||    
T  24321382 atgagtcattaattagtgttttttatatattatttgagtctgttttatttagat 24321435  T

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Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 133
Target Start/End: Original strand, 27498252 - 27498367
Alignment:
Q  18 ctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgat-aaa 116  Q
    ||||||||||||||||||||||| |||| || | |||| || | | | ||||||||||||||| ||  |||||||| |||||||| | |||||||| |||    
T  27498252 ctcatcaacatataataaaaatcatcaaagttgtcatgtcatacaat-cataatacatcaccataaacaatctccattctcaacataatgagtgataaaa 27498350  T
Q  117 tctcataaagtcataaa 133  Q
    | |||||||||||||||    
T  27498351 tatcataaagtcataaa 27498367  T

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Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 146
Target Start/End: Original strand, 18928254 - 18928383
Alignment:
Q  18 ctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtga--taa 115  Q
    ||||||| || ||||||||||||| |||  |||||||| || ||| | ||||||||||||||| ||  ||||||||||||||||| |||||||||   ||    
T  18928254 ctcatcagcagataataaaaatctccaaaatagccatgtcacatagt-cataatacatcaccataaataatctccaatctcaacatactgagtgaataaa 18928352  T
Q  116 atctcataaagtcataaaaaataaataacaa 146  Q
    ||||||  || ||||||||  ||||||||||    
T  18928353 atctcaacaaatcataaaatgtaaataacaa 18928383  T

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Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 197 - 257
Target Start/End: Complemental strand, 23257575 - 23257515
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||| | ||||||||| | | | ||||||||||||||||||||||||||||||    
T  23257575 ttgatgagtcattatttagtgtttttaacagattatttgagtctattttatttagatttta 23257515  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 257
Target Start/End: Complemental strand, 20109437 - 20109378
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||||  |||||||||||   |||||||||||||||| |||||||||||||||||    
T  20109437 tgatgagtcaataattagtgttttaaatatattatttgagtccattttatttagatttta 20109378  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 255
Target Start/End: Complemental strand, 21953 - 21897
Alignment:
Q  199 gatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    |||||||||  ||||||||||| | ||||| |||||||||| |||||||||||||||    
T  21953 gatgagtcaataattagtgtttttaatataatatttgagtccattttatttagattt 21897  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 20851798 - 20851858
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||||| ||||||||||| | ||| ||||||| ||||  ||||||||||||||||    
T  20851798 ttgatgagtcattaattagtgtttttaatagattatttaagtcggttttatttagatttta 20851858  T

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Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 199 - 257
Target Start/End: Complemental strand, 19013522 - 19013464
Alignment:
Q  199 gatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    |||||||||| ||||||||||| | ||| ||||||||||||  ||||||||| ||||||    
T  19013522 gatgagtcattaattagtgtttttaatagattatttgagtcccttttatttacatttta 19013464  T

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Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 25337656 - 25337598
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    |||||||||||  |||||||| || | ||||| ||||||| ||||||||||||||||||    
T  25337656 ttgatgagtcaataattagtgattttaatataatatttgaatctattttatttagattt 25337598  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 65 - 102
Target Start/End: Complemental strand, 23781488 - 23781451
Alignment:
Q  65 tcataatacatcaccaaaataaatctccaatctcaaca 102  Q
    |||||||||||||||||| |||||||||| ||||||||    
T  23781488 tcataatacatcaccaaagtaaatctccagtctcaaca 23781451  T

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Target: scaffold0186 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 10624 - 10704
Alignment:
Q  32 ataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaaataaatctccaatctcaacaaactgagtgata 114  Q
    |||||||| ||||| ||||||||| || || | ||| ||||||||||||||||||||||| |||||||||| |||||||||||    
T  10624 ataaaaat-ttcaaagtagccatgtcacat-tatcacaatacatcaccaaaataaatctctaatctcaacatactgagtgata 10704  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 65 - 145
Target Start/End: Original strand, 80296 - 80377
Alignment:
Q  65 tcataatacatcaccaaaataaatctcc-aatctcaacaaactgagtg-ataaatctcataaagtcataaaaaataaataaca 145  Q
    ||||| |||||||||||||||||||||| ||||||||| ||||||||| | |||| |||||||||||||||  ||||||||||    
T  80296 tcatattacatcaccaaaataaatctccaaatctcaac-aactgagtgaacaaatatcataaagtcataaagtataaataaca 80377  T

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Target: scaffold0115 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 41705 - 41559
Alignment:
Q  16 atctcatcaacatataataaaaatcttcaaggtagccatgccaaatatttcataatacatcaccaaa-ataaatctccaatctcaacaaactgagtgata 114  Q
    |||||||||||| ||||||||| ||| ||| ||||||||| ||  |||  ||||||||||||||||| ||||||||| ||  | |||| ||||||||||     
T  41705 atctcatcaacaaataataaaa-tctccaaagtagccatgtcatgtat--cataatacatcaccaaatataaatctcaaactttaacatactgagtgat- 41610  T
Q  115 aatctcataaagtcataaaaaataaataacaacagacagacatcctaatcag 166  Q
    |||||||| ||  ||| |||||||||| | || |||| |||| |||||||||    
T  41609 aatctcatcaaaacatgaaaaataaatgaaaaaagactgaca-cctaatcag 41559  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 197 - 257
Target Start/End: Original strand, 172312 - 172372
Alignment:
Q  197 ttgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||| |||||  |||||||||||   |||||||||||||||||||| |||||||||||||    
T  172312 ttgataagtcaataattagtgttttaaatatattatttgagtctattatatttagatttta 172372  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 103
Target Start/End: Complemental strand, 64572 - 64538
Alignment:
Q  69 aatacatcaccaaaataaatctccaatctcaacaa 103  Q
    |||||| ||||||||||||||||||||||||||||    
T  64572 aatacaacaccaaaataaatctccaatctcaacaa 64538  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 257
Target Start/End: Original strand, 37924 - 37981
Alignment:
Q  200 atgagtcataaattagtgtttgttatatattatttgagtctattttatttagatttta 257  Q
    ||||||||  ||||||||||| | |||  |||||||||| ||||||||||||||||||    
T  37924 atgagtcaataattagtgtttttaataggttatttgagtttattttatttagatttta 37981  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 224 - 257
Target Start/End: Original strand, 520352 - 520385
Alignment:
Q  224 atatattatttgagtctattttatttagatttta 257  Q
    |||||| |||||||||||||||||||||||||||    
T  520352 atatataatttgagtctattttatttagatttta 520385  T

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Target: scaffold1559 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1559
Description:

Target: scaffold1559; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 250
Target Start/End: Original strand, 979 - 1031
Alignment:
Q  198 tgatgagtcataaattagtgtttgttatatattatttgagtctattttattta 250  Q
    ||||||||||| ||||||||||| | ||| |||||||||||||  ||||||||    
T  979 tgatgagtcattaattagtgtttttaatagattatttgagtctgctttattta 1031  T

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Target: scaffold0038 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 255
Target Start/End: Complemental strand, 22537 - 22477
Alignment:
Q  195 aattgatgagtcataaattagtgtttgttatatattatttgagtctattttatttagattt 255  Q
    |||||||||||||  ||||||||||| | || || ||||||||||  ||||||||||||||    
T  22537 aattgatgagtcaataattagtgtttttaatgtaatatttgagtccgttttatttagattt 22477  T

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