View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3568_high_9 (Length: 239)
Name: NF3568_high_9
Description: NF3568
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3568_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 31390438 - 31390672
Alignment:
| Q |
1 |
ttcataatagtagcaataaaatgccatcttattttcgatgtacaatgaagctaaagtctccaaatttctatgcacaggccttgaaacactctcacttctg |
100 |
Q |
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| T |
31390438 |
ttcataatagtagcaataaaatgccatcttatcttcaatgtacaatgaagctaaagtctccaaatttctatgcacaggccttgaaacactctcacttctg |
31390537 |
T |
|
| Q |
101 |
caagtatgcttgctcagaagaaattcctgagcttcaagacatgggaggtccagttgatggtatgtcataattataccaaactatcactaaaaatattgtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31390538 |
caagtatgcttgctcagaagaaattcctgagcttcaagacatgggaggtccagttgatggtatgtcataattataccaaactatcactaaaaatattgtt |
31390637 |
T |
|
| Q |
201 |
aatgtcttatacaaatatattaatttttaggctat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
31390638 |
aatgtcttatacaaatatattaatttttaggctat |
31390672 |
T |
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