View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3569_low_7 (Length: 249)
Name: NF3569_low_7
Description: NF3569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3569_low_7 |
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Alignment Details
Target: chr6 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 35095595 - 35095373
Alignment:
| Q |
17 |
aggatttaccgtatatcagaaccattagcttaatgaacaaccaattcgataccacatggccaggcctaaacaaactcaccggtcttaagaacatttacct |
116 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35095595 |
aggatttaccgtatatcagaaccattagcttaatgaacaaccaattcgataccacatggccaggcctaaacaaactcaccggtcttaagaacatttacct |
35095496 |
T |
|
| Q |
117 |
ttctaataataaattctctggcgagattccagcagaggcgtttcaagcgatgcagtggctgaagaaaatttatctcgacaataatcagttcactggtcct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35095495 |
ttctaataataaattctctggcgagattccagcagaggcgtttcaagcgatgcagtggctgaagaaaatttatctcgacaataatcagttcactggtcct |
35095396 |
T |
|
| Q |
217 |
attccaacttcccttgcttcatt |
239 |
Q |
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||||||||||||||||||||||| |
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| T |
35095395 |
attccaacttcccttgcttcatt |
35095373 |
T |
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