View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3570_low_29 (Length: 284)
Name: NF3570_low_29
Description: NF3570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3570_low_29 |
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Alignment Details
Target: chr2 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 16 - 274
Target Start/End: Original strand, 26210096 - 26210354
Alignment:
| Q |
16 |
catcaacatccctcctattcctcaacaaaatctcccccacatgcgccggtgtaagggacccacccgaacgaatacacccttcgattgcctcaaacatcac |
115 |
Q |
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| T |
26210096 |
catcaacatccctcctattcctcaacaaaatctcccccacatgtgccggtgtaagggacccacccgaacgaatacacccttcgattgcctcaaacatcac |
26210195 |
T |
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| Q |
116 |
gtgtgactccagcccaaggtaattctttgccaactccctaaacgcatggaccccacacgtgcttaaactcacgtgcacgtccatgcgtccacacctaact |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26210196 |
gtgtgactccagcccaaggtaattctttgccaactccctaaacgcatggaccccacacgtgcttaaactcacgtgcacgtccatgcgtccacacctaact |
26210295 |
T |
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| Q |
216 |
aatgcaggatcaacactatccctatgattagttgtaaaaactactaacctctctgctcc |
274 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
26210296 |
aatgcaggatcaacactatccctatgattagttgtaaaaactactaacctctcttctcc |
26210354 |
T |
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