View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3570_low_46 (Length: 227)

Name: NF3570_low_46
Description: NF3570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3570_low_46
NF3570_low_46
[»] chr8 (31 HSPs)
chr8 (47-135)||(1530602-1530690)
chr8 (47-135)||(34146172-34146260)
chr8 (47-135)||(25496638-25496726)
chr8 (47-135)||(39628297-39628386)
chr8 (47-135)||(39637847-39637936)
chr8 (48-135)||(7695303-7695390)
chr8 (47-133)||(27231764-27231850)
chr8 (47-128)||(32233624-32233706)
chr8 (47-135)||(4418559-4418646)
chr8 (47-135)||(25400459-25400547)
chr8 (47-103)||(3741656-3741712)
chr8 (47-135)||(7578215-7578303)
chr8 (47-127)||(16599385-16599465)
chr8 (47-110)||(5870769-5870832)
chr8 (47-122)||(9455236-9455311)
chr8 (47-110)||(16393718-16393781)
chr8 (69-127)||(30887895-30887952)
chr8 (51-128)||(14896625-14896702)
chr8 (47-103)||(29315878-29315934)
chr8 (47-103)||(36682579-36682634)
chr8 (59-127)||(38401563-38401631)
chr8 (52-131)||(11087120-11087199)
chr8 (47-106)||(38457289-38457348)
chr8 (47-135)||(3443737-3443825)
chr8 (47-110)||(2742945-2743008)
chr8 (47-127)||(40557208-40557287)
chr8 (49-104)||(45083036-45083091)
chr8 (69-135)||(1358940-1359006)
chr8 (59-128)||(1256749-1256817)
chr8 (87-132)||(3741601-3741646)
chr8 (47-127)||(41411472-41411551)
[»] chr2 (35 HSPs)
chr2 (47-135)||(21252569-21252657)
chr2 (47-133)||(44898101-44898187)
chr2 (47-128)||(4316693-4316774)
chr2 (47-128)||(11083898-11083979)
chr2 (47-128)||(36244049-36244130)
chr2 (47-135)||(3309851-3309938)
chr2 (47-135)||(15507439-15507526)
chr2 (47-125)||(20171452-20171530)
chr2 (47-135)||(150292-150378)
chr2 (50-135)||(27746456-27746541)
chr2 (47-120)||(41541048-41541121)
chr2 (50-135)||(42756779-42756864)
chr2 (59-135)||(45273440-45273516)
chr2 (48-133)||(38589315-38589400)
chr2 (54-127)||(42872273-42872345)
chr2 (47-127)||(13386420-13386499)
chr2 (47-135)||(25965886-25965974)
chr2 (51-127)||(33659699-33659775)
chr2 (48-131)||(158105-158188)
chr2 (48-131)||(4700975-4701058)
chr2 (47-132)||(1397446-1397532)
chr2 (51-128)||(33659553-33659630)
chr2 (47-131)||(1770192-1770276)
chr2 (47-135)||(4959394-4959482)
chr2 (47-110)||(29408804-29408867)
chr2 (53-127)||(41117421-41117496)
chr2 (47-128)||(16806563-16806645)
chr2 (47-128)||(16845844-16845926)
chr2 (47-105)||(37814534-37814592)
chr2 (87-135)||(11074008-11074056)
chr2 (51-128)||(29882183-29882260)
chr2 (51-127)||(13140906-13140981)
chr2 (53-133)||(32113373-32113453)
chr2 (54-106)||(2218219-2218273)
chr2 (54-91)||(15263250-15263287)
[»] chr1 (28 HSPs)
chr1 (47-135)||(13254771-13254859)
chr1 (49-133)||(36319983-36320067)
chr1 (51-125)||(10430538-10430612)
chr1 (47-135)||(1674781-1674868)
chr1 (47-135)||(2655701-2655789)
chr1 (49-135)||(6295761-6295847)
chr1 (48-132)||(43021124-43021208)
chr1 (47-127)||(10101683-10101762)
chr1 (48-135)||(11238258-11238345)
chr1 (47-102)||(40519211-40519266)
chr1 (69-135)||(23697783-23697850)
chr1 (47-98)||(32769020-32769071)
chr1 (47-102)||(52414961-52415016)
chr1 (48-102)||(4671439-4671493)
chr1 (70-135)||(23698752-23698817)
chr1 (47-135)||(39386683-39386769)
chr1 (47-135)||(3901010-3901097)
chr1 (47-135)||(50488773-50488860)
chr1 (47-102)||(23699440-23699495)
chr1 (47-128)||(788297-788378)
chr1 (47-128)||(52281713-52281794)
chr1 (87-131)||(23699506-23699550)
chr1 (87-135)||(32768957-32769005)
chr1 (47-102)||(30280058-30280113)
chr1 (55-132)||(39157049-39157127)
chr1 (65-110)||(21535847-21535892)
chr1 (87-135)||(30279999-30280047)
chr1 (87-135)||(52414902-52414950)
[»] chr3 (33 HSPs)
chr3 (49-135)||(5493540-5493626)
chr3 (47-133)||(45646589-45646675)
chr3 (49-127)||(45759965-45760043)
chr3 (47-135)||(20841308-20841394)
chr3 (47-132)||(34668672-34668757)
chr3 (47-135)||(2093763-2093851)
chr3 (48-133)||(25342389-25342474)
chr3 (48-135)||(25841945-25842032)
chr3 (53-128)||(27264107-27264182)
chr3 (47-133)||(27817406-27817491)
chr3 (47-135)||(296421-296510)
chr3 (48-125)||(23272051-23272128)
chr3 (58-131)||(37030988-37031061)
chr3 (47-102)||(21934493-21934548)
chr3 (59-133)||(19578321-19578395)
chr3 (47-125)||(20141020-20141098)
chr3 (67-128)||(375740-375801)
chr3 (47-132)||(633294-633379)
chr3 (59-135)||(1272413-1272489)
chr3 (47-135)||(9588732-9588820)
chr3 (47-127)||(29556512-29556592)
chr3 (53-128)||(19234007-19234082)
chr3 (47-102)||(44940877-44940932)
chr3 (65-133)||(1405216-1405284)
chr3 (50-110)||(7259718-7259778)
chr3 (47-110)||(45667468-45667531)
chr3 (48-102)||(38751097-38751151)
chr3 (47-128)||(2440661-2440741)
chr3 (53-110)||(16237604-16237661)
chr3 (47-127)||(19187675-19187755)
chr3 (47-127)||(54675192-54675271)
chr3 (47-134)||(10614588-10614675)
chr3 (87-135)||(44940943-44940991)
[»] chr7 (31 HSPs)
chr7 (47-135)||(28226535-28226623)
chr7 (47-132)||(2273524-2273609)
chr7 (47-135)||(37124161-37124249)
chr7 (47-135)||(2798593-2798680)
chr7 (47-135)||(4962948-4963036)
chr7 (47-127)||(10535020-10535100)
chr7 (47-135)||(15643322-15643410)
chr7 (49-128)||(35793124-35793203)
chr7 (47-131)||(4567307-4567391)
chr7 (47-135)||(39430613-39430701)
chr7 (48-134)||(8614843-8614927)
chr7 (47-132)||(27723280-27723365)
chr7 (47-135)||(24394237-24394325)
chr7 (47-122)||(39599701-39599777)
chr7 (69-135)||(39617531-39617597)
chr7 (47-135)||(3835678-3835764)
chr7 (47-127)||(7809207-7809287)
chr7 (47-127)||(16196781-16196860)
chr7 (47-126)||(43368781-43368860)
chr7 (54-135)||(14735073-14735153)
chr7 (47-128)||(25290614-25290695)
chr7 (47-135)||(36412848-36412935)
chr7 (47-102)||(39427421-39427477)
chr7 (47-135)||(44550018-44550106)
chr7 (47-110)||(39432604-39432667)
chr7 (47-110)||(10026226-10026291)
chr7 (87-135)||(39427362-39427410)
chr7 (53-124)||(29606028-29606104)
chr7 (77-135)||(14771451-14771509)
chr7 (77-135)||(15221903-15221961)
chr7 (53-93)||(29747472-29747512)
[»] chr6 (18 HSPs)
chr6 (47-135)||(25056479-25056567)
chr6 (47-129)||(14093799-14093881)
chr6 (47-128)||(4665874-4665955)
chr6 (48-135)||(2437849-2437936)
chr6 (48-135)||(9095783-9095870)
chr6 (47-133)||(8049170-8049256)
chr6 (47-132)||(6111136-6111221)
chr6 (47-135)||(7972645-7972733)
chr6 (47-127)||(4122778-4122858)
chr6 (58-131)||(23410476-23410549)
chr6 (47-135)||(21527337-21527425)
chr6 (47-102)||(26252604-26252659)
chr6 (58-104)||(9353140-9353186)
chr6 (47-121)||(34889064-34889138)
chr6 (58-128)||(4184685-4184755)
chr6 (87-133)||(26252670-26252716)
chr6 (60-106)||(7833532-7833578)
chr6 (47-100)||(31660518-31660569)
[»] chr5 (29 HSPs)
chr5 (47-135)||(17201215-17201303)
chr5 (47-135)||(1583448-1583535)
chr5 (47-110)||(1590163-1590226)
chr5 (50-133)||(12436746-12436829)
chr5 (47-133)||(11992228-11992314)
chr5 (47-135)||(17202838-17202926)
chr5 (47-135)||(36246295-36246383)
chr5 (47-131)||(39614825-39614909)
chr5 (48-132)||(39940319-39940404)
chr5 (56-128)||(13220055-13220127)
chr5 (47-127)||(32717992-32718072)
chr5 (50-133)||(8544745-8544828)
chr5 (58-133)||(16365722-16365797)
chr5 (77-135)||(19803647-19803705)
chr5 (54-131)||(19931829-19931906)
chr5 (79-135)||(28619978-28620034)
chr5 (47-135)||(32474166-32474253)
chr5 (47-102)||(249552-249607)
chr5 (47-110)||(14654941-14655004)
chr5 (54-135)||(19924877-19924957)
chr5 (47-120)||(36194032-36194105)
chr5 (47-135)||(17591635-17591722)
chr5 (58-132)||(36437363-36437438)
chr5 (47-102)||(43346682-43346737)
chr5 (47-127)||(20201629-20201713)
chr5 (77-135)||(17557945-17558003)
chr5 (89-135)||(42674141-42674187)
chr5 (47-84)||(6428276-6428313)
chr5 (54-110)||(19922151-19922207)
[»] chr4 (32 HSPs)
chr4 (47-135)||(9089626-9089714)
chr4 (47-124)||(50720899-50720976)
chr4 (48-135)||(23529503-23529591)
chr4 (47-104)||(2492863-2492920)
chr4 (61-130)||(6949085-6949154)
chr4 (47-131)||(19443581-19443665)
chr4 (47-127)||(38840428-38840508)
chr4 (47-135)||(45635464-45635552)
chr4 (47-133)||(45666290-45666376)
chr4 (47-133)||(54982766-54982852)
chr4 (47-135)||(21956490-21956578)
chr4 (55-127)||(24074131-24074203)
chr4 (47-127)||(37209996-37210076)
chr4 (47-135)||(46195735-46195823)
chr4 (47-135)||(34032009-34032097)
chr4 (47-110)||(25493839-25493902)
chr4 (48-103)||(33889622-33889677)
chr4 (52-135)||(38045401-38045484)
chr4 (49-127)||(20782465-20782543)
chr4 (47-127)||(25490459-25490539)
chr4 (47-135)||(37371417-37371504)
chr4 (47-127)||(38434247-38434327)
chr4 (47-102)||(41502560-41502615)
chr4 (50-135)||(49299875-49299961)
chr4 (47-104)||(2684696-2684752)
chr4 (47-135)||(24538316-24538404)
chr4 (58-106)||(49263014-49263062)
chr4 (47-102)||(668039-668094)
chr4 (69-128)||(46196827-46196887)
chr4 (77-135)||(21342251-21342309)
chr4 (59-96)||(47944479-47944516)
chr4 (52-127)||(29961523-29961603)
[»] scaffold0005 (1 HSPs)
scaffold0005 (47-132)||(256736-256821)
[»] scaffold1327 (1 HSPs)
scaffold1327 (47-133)||(862-948)
[»] scaffold0118 (1 HSPs)
scaffold0118 (47-135)||(14908-14995)
[»] scaffold1130 (1 HSPs)
scaffold1130 (54-135)||(374-455)
[»] scaffold0006 (1 HSPs)
scaffold0006 (54-110)||(46594-46650)


Alignment Details
Target: chr8 (Bit Score: 77; Significance: 7e-36; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 1530602 - 1530690
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  1530602 ctttaggttttcaaatagatagcattaatcagttttattgaaaaaaataagagtaattgacaaaatgtataattgacaaatcgtaccct 1530690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 34146260 - 34146172
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||| | ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  34146260 ctttagttttccaaatagacatcattaattagttttattgaaaaagataagagtaattgacaaagagtataattgacaaatcgtaccct 34146172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 25496726 - 25496638
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||| |||||  |||||||||| ||||| ||||||    
T  25496726 ctttagtttttcaaatagatagcattaattagttttattgaaaaagataaaagtaattaacaaagggtataattgataaatcataccct 25496638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 39628297 - 39628386
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattga-caaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||| ||||||| ||||||||| ||||| ||||||||||||||  |||| |||||||||||||||||||||||    
T  39628297 ctttagttttccaaatagataacattaattagttttattgaaaaaaataagagtaattgataaaaaggtataattgacaaatcgtaccct 39628386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 39637847 - 39637936
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattga-caaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||| ||||||| ||||||||| ||||| ||||||||||||||  |||| |||||||||||||||||||||||    
T  39637847 ctttagttttccaaatagataacattaattagttttattgaaaaaaataagagtaattgataaaaaggtataattgacaaatcgtaccct 39637936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 7695303 - 7695390
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatg-tataattgacaaatcgtaccct 135  Q
    |||||||||||||||||||| ||||||  ||||||||| |||||||||||||||||| | |||||| ||||||||||||||||||||||    
T  7695303 tttagtttttcaaatagataacattaactagttttattgaaaaagataagagtaatt-aaaaaatgatataattgacaaatcgtaccct 7695390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 27231850 - 27231764
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||| |||||| ||||| |||||  |||||||||| ||||||||||    
T  27231850 ctttagttttccaaatagatagcattaattagttttattgaaaaaaataagaataattaacaaagagtataattgataaatcgtacc 27231764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 32233706 - 32233624
Alignment:
Q  47 ctttagtttttcaaatagata-gcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||| || |||||||||| |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  32233706 ctttagtgttccaaatagataagcattaattagttttattgaaaaagataagagtaattgacaaagggtataattgacaaatc 32233624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 4418646 - 4418559
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||||||||||| |||||||||| ||||||| || ||||||||||||  |||||||||||||||| ||||||    
T  4418646 ctttagttttccaaatatatagcattaattagttttatta-aaaagatgagggtaattgacaaagagtataattgacaaatcataccct 4418559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 25400547 - 25400459
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||||||||||| ||||||||| |||| ||||| ||||||| |||||  |||||||||| ||||| ||||||    
T  25400547 ctttagttttccaaatagatagcattaattagttttattgaaaaggataaaagtaattaacaaagggtataattgataaatcataccct 25400459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 3741712 - 3741656
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaat 103  Q
    |||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  3741712 ctttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaat 3741656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 7578215 - 7578303
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| ||||| ||||| ||||||||||| ||||||||| ||||| |||||| |||||||||||  |||||||||||| ||| ||||||    
T  7578215 ctttaattttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaagggtataattgacagatcataccct 7578303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 16599385 - 16599465
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||||||||| |||  |||||| ||||||||    
T  16599385 ctttagttttacaaatatatatcattaattagttttattgaaaaagataagagtaattgataaatggtataactgacaaat 16599465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 5870832 - 5870769
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||| ||||||| |||||||||||    
T  5870832 ctttagtttttcaaatagataacattaattagttttattgaaaatgataagaataattgacaaa 5870769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 122
Target Start/End: Complemental strand, 9455311 - 9455236
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattga 122  Q
    ||||| ||||||||||| ||||||||||| ||||||||| ||||| |||||| |||||||||||  ||||||||||    
T  9455311 ctttattttttcaaatatatagcattaattagttttattgaaaaatataagaataattgacaaatggtataattga 9455236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 16393781 - 16393718
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||| ||| |||||||||||||    
T  16393781 ctttagttttccaaatagatagcattaattagttttattgaaaaagctaaaagtaattgacaaa 16393718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 127
Target Start/End: Original strand, 30887895 - 30887952
Alignment:
Q  69 cattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  30887895 cattaattagttttattaaaaaagataagagtaattgac-aaaggtataattgacaaat 30887952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 14896702 - 14896625
Alignment:
Q  51 agtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||| ||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||   |||| ||||||||||    
T  14896702 agttttttaaatatataacattaattagttttattgaaaaagataagagtaattgacaaatgatatatttgacaaatc 14896625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 29315878 - 29315934
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaat 103  Q
    |||||||||| |||||| ||||||||| | |||||||||||||||||||||||||||    
T  29315878 ctttagttttccaaatatatagcattacttagttttattaaaaaagataagagtaat 29315934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Complemental strand, 36682634 - 36682579
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaat 103  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  36682634 ctttagtttttcaaatatata-cattaattagttttattaaaaaagataagagtaat 36682579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 38401631 - 38401563
Alignment:
Q  59 aaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||| ||| ||||||| | ||||||||||||||||||||||||||||||||   ||||||||||||||    
T  38401631 aaataaataacattaattaattttattaaaaaagataagagtaattgacaaataatataattgacaaat 38401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 52 - 131
Target Start/End: Complemental strand, 11087199 - 11087120
Alignment:
Q  52 gtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    |||||||||||||| |  |||||| | ||||||| | |||||||||||||||||  ||||| ||||||||||||||||||    
T  11087199 gtttttcaaatagacaatattaattaattttattgagaaagataagagtaattggtaaaatttataattgacaaatcgta 11087120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 106
Target Start/End: Complemental strand, 38457348 - 38457289
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattga 106  Q
    |||||||||| |||||||||||||||||| ||||||||| |||||||||| | |||||||    
T  38457348 ctttagttttccaaatagatagcattaattagttttattgaaaaagataaaaataattga 38457289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 3443737 - 3443825
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| ||||||||||| ||||| ||| ||||| ||||||  ||||| |||   |||||||||||||| | ||||||    
T  3443737 ctttagtttttcaaatatatagcattaattagtttgattgaaaaaaataagaacaattgtcaacgggtataattgacaaaacataccct 3443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 2742945 - 2743008
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||| ||||||||||| ||||||||||| ||||||||| ||||| |||| | |||||||||||    
T  2742945 ctttaatttttcaaatatatagcattaattagttttattgaaaaatataaaaataattgacaaa 2743008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 40557287 - 40557208
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||  ||| ||||||| ||||| ||| |||||||||||||||||  |||||  |||||||||| ||||    
T  40557287 ctttagtttttcaaatttataacattaattagttt-attgaaaaagataagagtaatcaacaaagggtataattgataaat 40557208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 104
Target Start/End: Original strand, 45083036 - 45083091
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaatt 104  Q
    |||||||| |||||| ||  ||||||| ||||||||| ||||||||||||||||||    
T  45083036 ttagttttccaaatacattacattaattagttttattgaaaaagataagagtaatt 45083091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 1358940 - 1359006
Alignment:
Q  69 cattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||| ||||||| | |||||||| ||||||||||| |||  | |||||||||||||| ||||||    
T  1358940 cattaattagttttaatgaaaaagattagagtaattgataaagggcataattgacaaatcataccct 1359006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 1256749 - 1256817
Alignment:
Q  59 aaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||  ||||||| | ||||||| |||| |||||||||||||||||||  | ||||||||||||||    
T  1256749 aaatagatgacattaattaattttatttaaaa-gataagagtaattgacaaagggcataattgacaaatc 1256817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 87 - 132
Target Start/End: Complemental strand, 3741646 - 3741601
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    ||||||||| |||||| |||||||  ||||||||||||||||||||    
T  3741646 aaaaagatacgagtaactgacaaatggtataattgacaaatcgtac 3741601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 41411472 - 41411551
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||  ||| | ||||| |||||| || |||||||||||||||||  |||||  |||||||||| ||||    
T  41411472 ctttagtttttcaaatttataactttaattagtttt-ttgaaaaagataagagtaatcaacaaagggtataattgataaat 41411551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 21252657 - 21252569
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||||||||||  |||||||||||||||||||||||    
T  21252657 ctttagtttttcaaatagatagcattaattaattttattgaaaaagataagtgtaattgacaaagagtataattgacaaatcgtaccct 21252569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 44898187 - 44898101
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||||    
T  44898187 ctttagtttttcaaatatataacattaattagttttattgaaaaagataagagtaattgacaaagggtataattgaaaaatcgtacc 44898101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 4316774 - 4316693
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  4316774 ctttagttttccaaatatataacattaattagttttattgaaaaagataagagtaattgacaaaagatataattgacaaatc 4316693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 11083979 - 11083898
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||||| |||| ||||||||||| |||||||| |||||||    
T  11083979 ctttagtttttcaaatatataacattaattagttttattaaaaaagatcagagaaattgacaaaaggtataattaacaaatc 11083898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 36244049 - 36244130
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||||||||| |||||| ||| ||||||| ||||||||||||||| ||||||||||||||||||  ||||||||||||||||    
T  36244049 ctttagttttccaaatatataacattaattagttttattaaaaaatataagagtaattgacaaagggtataattgacaaatc 36244130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 3309851 - 3309938
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||| |||| ||||||||||||| | ||||||||||||||| ||||||    
T  3309851 ctttagtttttcaaatagatagcaataattagttttattgaaaaa-ataaaagtaattgacaaattctataattgacaaatcttaccct 3309938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 15507526 - 15507439
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||||||| || ||||||||||| ||||| ||| ||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  15507526 ctttagtttttcaattatatagcattaattagttt-attgaaaaagataagagtaattgacaaagggtataattgacaaatcataccct 15507439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 20171452 - 20171530
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaa 125  Q
    |||||||||| |||||| ||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||    
T  20171452 ctttagttttccaaatatataacattaattagttttattgaaaaagataagagtaattgacaaagggtataattgacaa 20171530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 150292 - 150378
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| ||| ||||||| ||||||||| |||||  |||||||||||||||||  ||||||||||| |||||||||||    
T  150292 ctttagtttttcaaatatataacattaattagttttattgaaaaa--taagagtaattgacaaagggtataattgacgaatcgtaccct 150378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 27746541 - 27746456
Alignment:
Q  50 tagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||||||| ||||||||||| ||||||||| ||||| |||| ||||||  |||||| |||||||||||||||| ||||||    
T  27746541 tagtttttcaaatatatagcattaattagttttattgaaaaatataaaagtaataaacaaaaggtataattgacaaatcataccct 27746456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 120
Target Start/End: Complemental strand, 41541121 - 41541048
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataatt 120  Q
    ||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||| ||||||||  |||||||    
T  41541121 ctttagtttttcaaatatatagcattaattagttttattgaaaaagataagagtaaatgacaaaagatataatt 41541048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 50 - 135
Target Start/End: Complemental strand, 42756864 - 42756779
Alignment:
Q  50 tagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||| ||||| ||||||||||| ||||||||| ||||| |||||| ||||||||||||  ||||||||||||||| ||||||    
T  42756864 tagttttttaaatatatagcattaattagttttattgaaaaatataagaataattgacaaaagatataattgacaaatcataccct 42756779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 45273440 - 45273516
Alignment:
Q  59 aaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||| ||||    
T  45273440 aaatagatatcattaattagttttattgaaaaagataagagtaattgacaaagggtataattgacgaatcgtgccct 45273516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 38589315 - 38589400
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||||  |||||||||||||||||   ||||||| |||||||||| |||||||||||||  |||||||||| ||||||||||    
T  38589315 tttagttttctaaatagatagcattaattgattttattgaaaaagataaaagtaattgacaaatggtataattgataaatcgtacc 38589400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 54 - 127
Target Start/End: Original strand, 42872273 - 42872345
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| ||| ||||||| ||||| ||||||||| ||||||||||||||||||| |||||||||||||||    
T  42872273 ttttcaaatatataacattaattagttt-attaaaaaaaataagagtaattgacaaaaggtataattgacaaat 42872345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 13386499 - 13386420
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||| ||| || |||||||| ||||| ||| ||||| |||||||||||||| ||||||||||||||||||||    
T  13386499 ctttagtttttcagatacatggcattaattagttt-attgaaaaaaataagagtaattgagaaaatgtataattgacaaat 13386420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 25965886 - 25965974
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| |||    |||| ||||||||| ||||| ||||||||||||||||||  ||||| |||||||||||||||||    
T  25965886 ctttagtttttcaaatatataatgataatgagttttattgaaaaatataagagtaattgacaaagggtatagttgacaaatcgtaccct 25965974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 33659775 - 33659699
Alignment:
Q  51 agtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||| |||  |||||| ||||||||| ||||||||||||||||||||||||   ||||||||||||||    
T  33659775 agtttttcaaatatataatattaattagttttattgaaaaagataagagtaattgacaaatgatataattgacaaat 33659699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 158105 - 158188
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    ||||||||| |||||| |||  |||||| ||||||||| ||||||||||||||||||  ||||  |||||||||||||||||||    
T  158105 tttagttttccaaatatataaaattaattagttttattgaaaaagataagagtaatttgcaaagggtataattgacaaatcgta 158188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 4700975 - 4701058
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    ||||||||| |||||| |||| |||||| | ||||||| |||| |||||||||||||||||||  |||||||||| ||||||||    
T  4700975 tttagttttccaaatatatagtattaattaattttattgaaaacgataagagtaattgacaaatagtataattgataaatcgta 4701058  T

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Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 1397532 - 1397446
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagtttta-ttaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    ||||| ||||||||||||||||||||||| |||||||   ||||||||||| |||||||||||||  |||| |||| ||||||||||    
T  1397532 ctttaatttttcaaatagatagcattaattagttttacaaaaaaaagataaaagtaattgacaaagggtattattgccaaatcgtac 1397446  T

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Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 51 - 128
Target Start/End: Complemental strand, 33659630 - 33659553
Alignment:
Q  51 agtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||||| |||||| ||| ||||||| ||||||||| ||||| |||||||||||| | ||| |||||||||||||||||    
T  33659630 agttttccaaatatataacattaattagttttattgaaaaatataagagtaattaataaattgtataattgacaaatc 33659553  T

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Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 1770192 - 1770276
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    ||||||||||||||||| ||| ||||||| ||||||||| |||||  ||||||| |||||||||   ||||||||| ||||||||    
T  1770192 ctttagtttttcaaatatataacattaattagttttattgaaaaaattaagagtgattgacaaatgatataattgataaatcgta 1770276  T

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Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 4959394 - 4959482
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||| | |||||| ||||||||||| | ||||||||||||  |||||| | |||||||||  |||||||||||||||| ||||||    
T  4959394 ctttagttatccaaatatatagcattaattaattttattaaaaactataagaatgattgacaaacggtataattgacaaatcataccct 4959482  T

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Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 29408804 - 29408867
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||||||||| |||||||||| ||||||| | ||||||| |||||||||| |||||||||||||    
T  29408804 ctttagttttgcaaatagataacattaattacttttattgaaaaagataaaagtaattgacaaa 29408867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 41117496 - 41117421
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaaga-taagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||||||||| |||||| ||||||||| ||||| | ||||||||||||| ||| | ||||||||||||||    
T  41117496 tttttcaaatagatagtattaattagttttattgaaaaatagtaagagtaattgagaaagtctataattgacaaat 41117421  T

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Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 16806563 - 16806645
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttatta-aaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||||||||| | ||||||| |||||| ||  ||||| ||||| ||||||||||||  ||||||||||||||||    
T  16806563 ctttagtttttcaaatagacaacattaattagttttttttgaaaaatataagtgtaattgacaaagggtataattgacaaatc 16806645  T

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Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 16845844 - 16845926
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttatta-aaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||||||||| | ||||||| |||||| ||  ||||| ||||| ||||||||||||  ||||||||||||||||    
T  16845844 ctttagtttttcaaatagacaacattaattagttttttttgaaaaatataagtgtaattgacaaagggtataattgacaaatc 16845926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 105
Target Start/End: Complemental strand, 37814592 - 37814534
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattg 105  Q
    ||||||||||| |||||||||| ||| || ||||||||| |||||||||||||||||||    
T  37814592 ctttagttttttaaatagatagaatttattagttttattgaaaaagataagagtaattg 37814534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 11074008 - 11074056
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  11074008 aaaaagataagagtaattgacaaagggtataattgacaaattgtaccct 11074056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 128
Target Start/End: Original strand, 29882183 - 29882260
Alignment:
Q  51 agtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||| ||| |||| || ||||||||| ||||||||||||||| |||| |||  |||||| | |||||||    
T  29882183 agtttttcaaatatataacattgattagttttattcaaaaagataagagtagttgagaaagggtataagtaacaaatc 29882260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 13140906 - 13140981
Alignment:
Q  51 agtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||| |||| || ||||||||| ||||| || |||||||||||  ||| |||||||||| ||||    
T  13140906 agtttttcaaatagataacatttattagttttattgaaaaatat-agagtaattgaagaaaggtataattgataaat 13140981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 133
Target Start/End: Original strand, 32113373 - 32113453
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||| |||||| ||| ||||||| ||||||||| ||||| |||||| ||||||| |||   ||||||||||||||| ||||    
T  32113373 ttttccaaatatataacattaattagttttattgaaaaatataagaataattgataaaggatataattgacaaatcatacc 32113453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 54 - 106
Target Start/End: Complemental strand, 2218273 - 2218219
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttatt--aaaaaagataagagtaattga 106  Q
    |||||||||||||| ||||||| |||||||||  |||||| ||||||||||||||    
T  2218273 ttttcaaatagatatcattaattagttttattgaaaaaaaaataagagtaattga 2218219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 91
Target Start/End: Complemental strand, 15263287 - 15263250
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaa 91  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  15263287 ttttcaaatagatagcattaattagttttatgaaaaaa 15263250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 13254771 - 13254859
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  13254771 ctttagttctccaaatagatagcattaattagttttattgaaaaagataagagtaattgataaaaggtataattgacaaatcgtaccct 13254859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 133
Target Start/End: Original strand, 36319983 - 36320067
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||    
T  36319983 ttagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaatggtataattgacaaatcgtacc 36320067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 10430538 - 10430612
Alignment:
Q  51 agtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaa 125  Q
    |||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||    
T  10430538 agttttgcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaatggtataattgacaa 10430612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 1674781 - 1674868
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| ||| ||||||| ||||||||| ||||| |||||| |||||||| ||| |||||||||||||||||||||||    
T  1674781 ctttagtttttcaaatatataacattaattagttttattgaaaaatataagaataattgac-aaaggtataattgacaaatcgtaccct 1674868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 2655789 - 2655701
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||| ||||||| ||||||||| ||||| ||||||||||||||||||  |||||||||| ||||||||||||    
T  2655789 ctttagttttccaaatatataacattaattagttttattgaaaaatataagagtaattgacaaatggtataattgataaatcgtaccct 2655701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 6295761 - 6295847
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| |||||||  |||||||| | |||||| |||||    
T  6295761 ttagtttttcaaatagatagcattaattagttttatttaaaaagataaaagtaagtgacaaagggtataattaataaatcgcaccct 6295847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 132
Target Start/End: Complemental strand, 43021208 - 43021124
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||||||||||||||| ||| ||||||| ||||||||| | ||| ||||||||||||| ||||  ||||||||||||||||||||    
T  43021208 tttagtttttcaaatatataacattaattagttttattgataaatataagagtaattggcaaatggtataattgacaaatcgtac 43021124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 10101683 - 10101762
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||||| |||  |||||| ||||||||    
T  10101683 ctttagttttccaaatagatagcattatt-agttttattgaaaaagataagagtaattgagaaagggtataagtgacaaat 10101762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 11238258 - 11238345
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||| ||| ||||||| ||||||||| ||||| |||||| |||||| ||||  |||||| ||||||||||||||||    
T  11238258 tttagttttccaaatatatatcattaattagttttattgaaaaatataagaataattgccaaagggtataactgacaaatcgtaccct 11238345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 40519211 - 40519266
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  40519211 ctttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaa 40519266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 135
Target Start/End: Original strand, 23697783 - 23697850
Alignment:
Q  69 cattaatcagttttattaaaaaagataagagtaattga-caaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||| |||||||||||    
T  23697783 cattaatcagttttatcaaaaaatataagaataattgaccaaaatatataattgacgaatcgtaccct 23697850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 32769071 - 32769020
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataaga 98  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  32769071 ctttagtttttcaaatatatatcattaattagttttattaaaaaagataaga 32769020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 52415016 - 52414961
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| ||| ||||||| ||||||||||||||||||||||||||    
T  52415016 ctttagttttccaaatatataacattaattagttttattaaaaaagataagagtaa 52414961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 4671493 - 4671439
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    ||||||||| |||||| |||| |||||| ||||||||||||||||||||||||||    
T  4671493 tttagttttccaaatatatagtattaattagttttattaaaaaagataagagtaa 4671439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 23698817 - 23698752
Alignment:
Q  70 attaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||| ||||||||| ||||| ||||||||||||||||||   ||||||||||||||| ||||||    
T  23698817 attaattagttttatttaaaaatataagagtaattgacaaaggatataattgacaaatcataccct 23698752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 39386769 - 39386683
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| |||| ||||||||| | |||||| ||||  ||| ||||||||||||||||||||||||  |||||||||| ||||| ||||||    
T  39386769 ctttatttttccaaatagattgtattaattagtt--attgaaaaagataagagtaattgacaaagggtataattgaaaaatcataccct 39386683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 3901097 - 3901010
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||  ||| ||||||| |||||| || |||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  3901097 ctttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagggtataattgataaattgtaccct 3901010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 50488773 - 50488860
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||  ||| ||||||| |||||| || |||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  50488773 ctttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagggtataattgataaattgtaccct 50488860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 23699440 - 23699495
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| ||||||||||| ||||||||| ||||||||||| ||||    
T  23699440 ctttagttttccaaatatatagcattaattagttttattgaaaaagataagcgtaa 23699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 788297 - 788378
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||| |||| |||||| ||| ||||||| ||||||||| ||||| || ||| |||||||||||  |||||||||| |||||    
T  788297 ctttatttttccaaatatataacattaattagttttattgaaaaatattagaataattgacaaatggtataattgataaatc 788378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 52281794 - 52281713
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||| ||||||||| ||||||| ||||||||| ||||||||  ||||| |||| |||   ||||| |||||||||    
T  52281794 ctttagttttttaaatagataacattaattagttttattgaaaaagatccgagtagttgagaaaggatataagtgacaaatc 52281713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 23699506 - 23699550
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||    
T  23699506 aaaaagatacgagtaattgacaaagggtataattgacaaatcgta 23699550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 32769005 - 32768957
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||||||| |||  |||||||||||||||||||||||    
T  32769005 aaaaagatacgagtaattgataaagagtataattgacaaatcgtaccct 32768957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 30280113 - 30280058
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| | | ||||||| |||||||||||| |||||||||||||    
T  30280113 ctttagttttccaaatatacaacattaattagttttattaaagaagataagagtaa 30280058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 132
Target Start/End: Complemental strand, 39157127 - 39157049
Alignment:
Q  55 tttcaaatagatagcattaatcagttttattaaaaaaga-taagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    ||||||||| ||| ||||||| |||| |||||||||| | ||||||||||| |||||  |||||| |||||||| ||||    
T  39157127 tttcaaatatataacattaattagttctattaaaaaaaaataagagtaattaacaaagggtataactgacaaattgtac 39157049  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 110
Target Start/End: Original strand, 21535847 - 21535892
Alignment:
Q  65 atagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||||||||| ||||||||| ||||| |||||| |||||||||||    
T  21535847 atagcattaattagttttattgaaaaatataagaataattgacaaa 21535892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 30280047 - 30279999
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| ||| ||||||||||||||  ||||||||||||||||| |||||    
T  30280047 aaaaaaatacgagtaattgacaaagggtataattgacaaatcgcaccct 30279999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 52414950 - 52414902
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| ||||||||||||||   ||||||||||||||| ||||||    
T  52414950 aaaaagatacgagtaattgacaaaggttataattgacaaatcataccct 52414902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 63; Significance: 2e-27; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 49 - 135
Target Start/End: Complemental strand, 5493626 - 5493540
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  5493626 ttagtttttcaaatagacaacattaattagttttattgaaaaagataagagtaattgacaaagggtataattgacaaatcgtaccct 5493540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 45646675 - 45646589
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||| || |||||||||||||  |||||||||||||||||||||    
T  45646675 ctttagtttttcaaatagatagcattaattagttttattgaaaaagaaaaaagtaattgacaaagggtataattgacaaatcgtacc 45646589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 49 - 127
Target Start/End: Original strand, 45759965 - 45760043
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||||||  |||||||||||||||    
T  45759965 ttagtttttcaaatagatagcattaattagttttattgagaaagataagagtaattgacaaagggtataattgacaaat 45760043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 20841394 - 20841308
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||  |||||||||||||  |||||||||||||||||||||||    
T  20841394 ctttagtttttcaaatagatagcattaattagttttattgaaaaaaata--agtaattgacaaatggtataattgacaaatcgtaccct 20841308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 34668757 - 34668672
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||| | || |||||||||||||  ||||||||||||||||||||    
T  34668757 ctttagttttccaaatagatagcattaattagttttattcaaaaaaaaaaaagtaattgacaaagggtataattgacaaatcgtac 34668672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 2093851 - 2093763
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||||||||| | ||| | | |||||||||| |||||||||||||  |||||||||||||||| ||||||    
T  2093851 ctttagtttttcaaatagatagcattaattaatttgactgaaaaagataaaagtaattgacaaagggtataattgacaaatcataccct 2093763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 133
Target Start/End: Original strand, 25342389 - 25342474
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||||| |||||| ||| ||||||| |||||||||||||| ||||| |||||||||||||   ||||||||||||||||||||    
T  25342389 tttagttttccaaatatataacattaattagttttattaaaaacgataaaagtaattgacaaaggatataattgacaaatcgtacc 25342474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 25841945 - 25842032
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||| ||||||||||| ||||||||| ||||| |||||| |||||||||||  |||| ||||||||||| ||||||    
T  25841945 tttagttttccaaatatatagcattaattagttttattgaaaaatataagattaattgacaaagggtatgattgacaaatcataccct 25842032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 27264182 - 27264107
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||| |||| ||||||||||||| | ||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  27264182 ttttccaaaaagatagcattaattaattttattgaaaaagataagagtaattgacaaatggtataattgacaaatc 27264107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 27817491 - 27817406
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||||||||||||||| || ||| || ||||||||| |||||||||| | |||||||||||| |||||||||||||| ||||||    
T  27817491 ctttagtttttcaaatagagagaattcattagttttattgaaaaagataa-aataattgacaaaaggtataattgacaaaccgtacc 27817406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 296510 - 296421
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttatt-aaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||||||| ||| ||||||||  |||||||||||||||||||||||||  |||||| ||||||||| ||||||    
T  296510 ctttagttttccaaatatatagcataaattagttttatagaaaaaagataagagtaattgacaaagggtataactgacaaatcataccct 296421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 125
Target Start/End: Complemental strand, 23272128 - 23272051
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaa 125  Q
    |||| ||||| ||||| |||||||||||  |||||||| |||||||||||| ||||||| ||||||||||||||||||    
T  23272128 tttaattttttaaatatatagcattaatttgttttattgaaaaagataagaataattgagaaaatgtataattgacaa 23272051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 37030988 - 37031061
Alignment:
Q  58 caaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    |||||||||||||||||| ||||||||| |||||| ||| |||||||| ||||  |||||||||||||||||||    
T  37030988 caaatagatagcattaattagttttattgaaaaagctaaaagtaattggcaaagggtataattgacaaatcgta 37031061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 21934493 - 21934548
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  21934493 ctttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaa 21934548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 133
Target Start/End: Complemental strand, 19578395 - 19578321
Alignment:
Q  59 aaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||| ||| ||||||| ||||||||| ||||||| ||||| ||||||||||  |||||||||||||||||||||    
T  19578395 aaatatataacattaattagttttattgaaaaagacaagagcaattgacaaagggtataattgacaaatcgtacc 19578321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 20141020 - 20141098
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaa 125  Q
    ||||| ||||| ||||| ||| |||||||  |||||||| |||||||||||||||||||| |||| |||||||||||||    
T  20141020 ctttaattttttaaatacataacattaatttgttttattgaaaaagataagagtaattgagaaaaggtataattgacaa 20141098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 375801 - 375740
Alignment:
Q  67 agcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||| | |||||||||||||||||||||||||||||||||  ||||||| |||||||    
T  375801 agcattaattaattttattaaaaaagataagagtaattgacaaaagatataattaacaaatc 375740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 633294 - 633379
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||||||||| |||||| ||| ||||||| ||||||||| |||| |||||||||||||||||||   | |||||| ||||||||||    
T  633294 ctttagttttccaaatatataacattaattagttttattgaaaatgataagagtaattgacaaaggatgtaattgtcaaatcgtac 633379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 135
Target Start/End: Complemental strand, 1272489 - 1272413
Alignment:
Q  59 aaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| ||||||||||| ||||||||| ||||| ||||||||||||||||||  ||||| |||| ||||| ||||||    
T  1272489 aaatatatagcattaattagttttattgaaaaatataagagtaattgacaaagggtatagttgaaaaatcataccct 1272413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 9588820 - 9588732
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||| ||||||| |||||| || |||||||||  |||||||||||||  |||||||||| ||||| ||||||    
T  9588820 ctttagttttccaaatatataacattaattagtttttttgaaaaagatattagtaattgacaaagggtataattgataaatcataccct 9588732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 29556512 - 29556592
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||| |||||||||||||| | ||||  | ||||||||| |||||||||||||||||||| ||| ||||||||||| ||||    
T  29556512 cttttgtttttcaaatagagaacatttgttagttttattgaaaaagataagagtaattgagaaattgtataattgataaat 29556592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 128
Target Start/End: Original strand, 19234007 - 19234082
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||| |||||| |||||||||||   ||||||| ||||||||||||||||||||||||  |||||||||| |||||    
T  19234007 ttttccaaatatatagcattaattttttttattgaaaaagataagagtaattgacaaagggtataattgaaaaatc 19234082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 44940877 - 44940932
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||    
T  44940877 ctttaatttttcaaatatatagcattaattagttttattaaaaaagataaaagtaa 44940932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 133
Target Start/End: Complemental strand, 1405284 - 1405216
Alignment:
Q  65 atagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||||||| ||| ||||| ||||| || |||||||||||||||  ||||||||||||||| |||||    
T  1405284 atagcattaattagtgttatttaaaaatattagagtaattgacaaatggtataattgacaaattgtacc 1405216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 50 - 110
Target Start/End: Original strand, 7259718 - 7259778
Alignment:
Q  50 tagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||||| |||||| ||||||||||| ||||||||| ||||| |||||| |||||||||||    
T  7259718 tagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaa 7259778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 45667531 - 45667468
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||| ||||| |||||||||||||||||| | ||||||| |||||||| | |||||||||||||    
T  45667531 ctttcgttttccaaatagatagcattaattaattttattgaaaaagatcaaagtaattgacaaa 45667468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 102
Target Start/End: Original strand, 38751097 - 38751151
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    ||||||||| |||||| ||||||||| | ||||||||||||||||| ||||||||    
T  38751097 tttagttttccaaatatatagcattacttagttttattaaaaaagacaagagtaa 38751151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 128
Target Start/End: Original strand, 2440661 - 2440741
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||||||| |||  |||||| | ||||||| |||| ||||| | |||||||||||  ||||||||||||||||    
T  2440661 ctttagtttttcaaatatatataattaattaattttattgaaaa-gataaaactaattgacaaagggtataattgacaaatc 2440741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 16237604 - 16237661
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||| |||||||||||||||||| || |||||| ||||| |||| |||||||||||||    
T  16237604 ttttccaaatagatagcattaattagctttattgaaaaatataatagtaattgacaaa 16237661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 19187675 - 19187755
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||| ||||||||||| ||| ||||||| ||||||||| ||||| ||||| ||||| |||| |  |||||||| ||||||    
T  19187675 ctttaatttttcaaatatatatcattaattagttttattgaaaaaaataagtgtaatcgacacagagtataatttacaaat 19187755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 54675192 - 54675271
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||  ||| ||||||| |||||| || |||||||||||||||||  |||||  |||||||||| ||||    
T  54675192 ctttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaatcaacaaagggtataattgataaat 54675271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 134
Target Start/End: Complemental strand, 10614675 - 10614588
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccc 134  Q
    |||| |||||| |||||| |  ||||||| ||||||| | |||||||||||||||||||| |||  ||| || ||||||||| |||||    
T  10614675 cttttgtttttaaaataggtgtcattaattagttttaatgaaaaagataagagtaattgagaaatggtacaagtgacaaatcttaccc 10614588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 135
Target Start/End: Original strand, 44940943 - 44940991
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||||||| |||  |||||||||| ||||||||||||    
T  44940943 aaaaagatacgagtaattgataaagggtataattgaaaaatcgtaccct 44940991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 2e-26; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 28226623 - 28226535
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  28226623 ctttagtttttcaaatatataacattaattagttttattgaaaaagataagagcaattgacaaaaggtataattgacaaagcgtaccct 28226535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 2273524 - 2273609
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||||||||| |||||| ||||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  2273524 ctttagttttccaaatatatagcattaataagttttattgaaaaagataagagtaattgacaaagcgtataattgacaaattgtac 2273609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 37124249 - 37124161
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||| ||||||||| ||||||||| |||||||||||||||||| |||||  ||||||||||||||| |||||||    
T  37124249 ctttagttttccaaatagagagcattaattagttttattgaaaaagataagagtaatttacaaagggtataattgacaaattgtaccct 37124161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 2798680 - 2798593
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||| | | ||||||| |||||||| ||||||    
T  2798680 ctttagtttttcaaatatatagcattaattagttttattgaaaaagataagagtaattgac-agaggtataatcgacaaatcataccct 2798593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 4962948 - 4963036
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||||| |||||| |||||||||||| |||||||||| ||||| ||||||    
T  4962948 ctttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgacaaaaggtataattgataaatcataccct 4963036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 10535020 - 10535100
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||| ||||||||||||||  ||||||| ||||||||| ||||||||||||| ||||||||||| |||||||||||||||    
T  10535020 ctttaatttttcaaatagattacattaattagttttattgaaaaagataagaggaattgacaaaaggtataattgacaaat 10535100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 15643410 - 15643322
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||||||||||| ||||||||| ||||| |||||||||||||| |||  |||||||||| ||||||||||||    
T  15643410 ctttagttttccaaatatatagcattaattagttttattgaaaaaaataagagtaattgataaagggtataattgagaaatcgtaccct 15643322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 35793124 - 35793203
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||||||| |||||||| | ||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||    
T  35793124 ttagttttccaaatagacaacattaattagttttattgaaaaagataagagtaattgacaaagggtataattgacaaatc 35793203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 4567391 - 4567307
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    |||||||||| ||| |||||||||||||| ||||||||| |||||||||| |||| ||||||||  ||||||| |||||||||||    
T  4567391 ctttagttttccaactagatagcattaattagttttattgaaaaagataaaagtagttgacaaagggtataatcgacaaatcgta 4567307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 39430613 - 39430701
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||||| |||||| |||||||||||  ||||||||| |||||| ||||||    
T  39430613 ctttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgacaaagagtataattgtcaaatcttaccct 39430701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 48 - 134
Target Start/End: Original strand, 8614843 - 8614927
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccc 134  Q
    |||||||||||||||||||| || |||| ||||||||||||||| ||||||||||||||| ||  |||||||||| |||||||||||    
T  8614843 tttagtttttcaaatagataacaataattagttttattaaaaaa-ataagagtaattgac-aagggtataattgaaaaatcgtaccc 8614927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 27723365 - 27723280
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    ||||| ||||||||| ||||||||||||| ||||||| | |||||||||| ||||||| |||||  |||||| |||||||||||||    
T  27723365 ctttaatttttcaaacagatagcattaattagttttactgaaaaagataaaagtaattaacaaagagtataagtgacaaatcgtac 27723280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 24394237 - 24394325
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||| ||||| | ||||||||| ||||| ||||||||| ||||||||  |||||||||| ||||||||||||    
T  24394237 ctttagttttccaaatatatatcattagttagttttattcaaaaatataagagtagttgacaaagggtataattgataaatcgtaccct 24394325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 122
Target Start/End: Original strand, 39599701 - 39599777
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttat-taaaaaagataagagtaattgacaaaatgtataattga 122  Q
    ||||||||||||||||| ||||||||||| ||||||||  ||||||||||||||||||||| |||  ||||||||||    
T  39599701 ctttagtttttcaaatatatagcattaattagttttatcgaaaaaagataagagtaattgataaagggtataattga 39599777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 39617597 - 39617531
Alignment:
Q  69 cattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||| | ||||||| |||||||||| |||||||||||||| |||||| ||||||||||||||||    
T  39617597 cattaattaattttattgaaaaagataaaagtaattgacaaaaggtataactgacaaatcgtaccct 39617531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 3835678 - 3835764
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| ||||||||||  |||||| ||||  ||| |||||||||||||| ||||||| |  |||||||||||||||||||||||    
T  3835678 ctttagttttccaaatagataatattaattagtt--attgaaaaagataagagtgattgacagagggtataattgacaaatcgtaccct 3835764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 7809207 - 7809287
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| | |||| |||| |||||| ||||||||| |||||||||| ||||||||| |||  |||||||||||||||    
T  7809207 ctttagttttcctaatacatagtattaattagttttatttaaaaagataaaagtaattgagaaatggtataattgacaaat 7809287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 16196860 - 16196781
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| ||| |||||| ||| ||| ||||||||| |||||||||||||||| |||||||  |||||||||||||||    
T  16196860 ctttagttttccaattagataacatcaattagttttattgaaaaagataagagtaa-tgacaaagggtataattgacaaat 16196781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 126
Target Start/End: Complemental strand, 43368860 - 43368781
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaa 126  Q
    |||||||||| |||||| ||| | ||||| ||||||||| |||||||||| |||||||||||||  |||| |||||||||    
T  43368860 ctttagttttccaaatatataactttaattagttttatttaaaaagataaaagtaattgacaaagggtatgattgacaaa 43368781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 14735073 - 14735153
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||| ||||| | ||||||||| |||||||||||||||||| | |||  |||||| ||||||||||||||||    
T  14735073 ttttcaaattgataacattatt-agttttattgaaaaagataagagtaattaagaaatagtataaatgacaaatcgtaccct 14735153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 25290695 - 25290614
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||||||| |   ||||||| ||||||||| ||||| |||||| ||||||||||||  ||||||||| |||||    
T  25290695 ctttagtttttcaaatatacgacattaattagttttattgaaaaatataagaataattgacaaaagatataattgataaatc 25290614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 36412848 - 36412935
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||  ||| ||||||| |||||| || |||||||||||||||||  |||||  |||||||||| |||| |||||||    
T  36412848 ctttagtttttcaaatttataacattaattagtttt-ttgaaaaagataagagtaataaacaaagggtataattgataaattgtaccct 36412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 39427477 - 39427421
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatc-agttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| |||||||||||  ||||||||||||||||||||||||||    
T  39427477 ctttagttttccaaatatatagcattaatttagttttattaaaaaagataagagtaa 39427421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 44550106 - 44550018
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||| |||||| ||||||||  ||||||| ||||||| | |||||||||||||||||||| |||  ||| || ||||||||| ||||||    
T  44550106 cttttgtttttaaaatagatgtcattaattagttttaatgaaaaagataagagtaattgagaaatggtacaagtgacaaatcttaccct 44550018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 39432667 - 39432604
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||||| |||| | |||||||||||    
T  39432667 ctttagtttttcaaatatatagcactaataagttttattgaaaaatataaaaataattgacaaa 39432604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 10026226 - 10026291
Alignment:
Q  47 ctttagtttttcaaatagatag--cattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||||||||||||||| |||   ||||||| ||||||||| |||||||||||||||||| |||||    
T  10026226 ctttagtttttcaaatatatataacattaattagttttattgaaaaagataagagtaattaacaaa 10026291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 87 - 135
Target Start/End: Complemental strand, 39427410 - 39427362
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| ||||||||||||||  ||||||||||||||||| |||||    
T  39427410 aaaaagatacgagtaattgacaaagagtataattgacaaatcgcaccct 39427362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 29606104 - 29606028
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaaga-taag----agtaattgacaaaatgtataattgaca 124  Q
    ||||||||||||||| ||||||| || |||||||||||||| ||||    |||||||||| || |||||||||||||    
T  29606104 tttttcaaatagataacattaattagctttattaaaaaagaataagtagaagtaattgactaagtgtataattgaca 29606028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 14771451 - 14771509
Alignment:
Q  77 agttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||| |||| ||||| |||||| |||||||||||  |||||||||||||||| ||||||    
T  14771451 agttatattgaaaaatataagaataattgacaaagggtataattgacaaatcataccct 14771509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 15221903 - 15221961
Alignment:
Q  77 agttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||| |||| ||||| |||||| |||||||||||  |||||||||||||||| ||||||    
T  15221903 agttatattgaaaaatataagaataattgacaaagggtataattgacaaatcataccct 15221961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 93
Target Start/End: Original strand, 29747472 - 29747512
Alignment:
Q  53 tttttcaaatagatagcattaatcagttttattaaaaaaga 93  Q
    ||||||||||||||| ||||||| || ||||||||||||||    
T  29747472 tttttcaaatagataacattaattagctttattaaaaaaga 29747512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 2e-26; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 25056567 - 25056479
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||  |||| ||||||||||| ||||||    
T  25056567 ctttagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaagagtatgattgacaaatcataccct 25056479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 47 - 129
Target Start/End: Original strand, 14093799 - 14093881
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcg 129  Q
    ||||||||||  |||| |||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||    
T  14093799 ctttagttttcaaaatcgatagcattaattagttttattgaaaaagataagagtaattgacaaagagtataattgacaaatcg 14093881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 128
Target Start/End: Complemental strand, 4665955 - 4665874
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||||||||||||| ||||||||||| ||||||||| ||||| |||||||||||||| |||  ||||||||||||||||    
T  4665955 ctttagtttttcaaatatatagcattaattagttttatttaaaaatataagagtaattgataaatggtataattgacaaatc 4665874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 2437849 - 2437936
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||||||| ||||||| ||||||||| ||||| |||||| |||||||||||  |||||||||||||||| ||||||    
T  2437849 tttagttttccaaatagatatcattaattagttttattgaaaaaaataagaataattgacaaagggtataattgacaaatcataccct 2437936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 135
Target Start/End: Original strand, 9095783 - 9095870
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||| ||||||||||| ||||||||| ||||| |||||| |||||||||||  |||||||||||||||| ||||||    
T  9095783 tttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaatggtataattgacaaatcataccct 9095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 8049256 - 8049170
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||||||||  ||| |||||| ||||| ||||    
T  8049256 ctttagttttccaaatagatatcattaattagttttattgaaaaagataagagtaattgacaaagggtaaaattgataaatcatacc 8049170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 6111136 - 6111221
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||||||||| |||  |||||| |||||||||||||    
T  6111136 ctttagttttccaaatatataacattaattagttttatttaaaaagataagagtaattgataaatggtataactgacaaatcgtac 6111221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 7972645 - 7972733
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| ||| ||||||| ||||||||| ||||| || ||| ||||||||||| ||||||||||| ||||| ||||||    
T  7972645 ctttagtttttcaaatatataacattaattagttttattgaaaaatattagaataattgacaaagtgtataattgataaatcataccct 7972733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 4122858 - 4122778
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||| ||||||||||||||| ||||||| | ||||||| |||||||||||||||||||| |||  |||||| ||||||||    
T  4122858 ctttactttttcaaatagataacattaattaattttattgaaaaagataagagtaattgagaaatggtataagtgacaaat 4122778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 131
Target Start/End: Complemental strand, 23410549 - 23410476
Alignment:
Q  58 caaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    |||||| ||| ||||||| |||||||||||||||||||| |||||||  ||||  |||||||||||||||||||    
T  23410549 caaatatataacattaattagttttattaaaaaagataaaagtaatttgcaaagagtataattgacaaatcgta 23410476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 21527337 - 21527425
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||| | ||||||||| ||||||| | ||||| || ||| |||||||||||  || ||||||||||||| ||||||    
T  21527337 ctttagtttttcaaatataaagcattaattagttttaatgaaaaatattagaataattgacaaagggtttaattgacaaatcataccct 21527425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 26252604 - 26252659
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    ||||| |||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  26252604 ctttatttttccaaatatatagcattaattagttttattaaaaaagataagagtaa 26252659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 9353186 - 9353140
Alignment:
Q  58 caaatagatagcattaatcagttttattaaaaaagataagagtaatt 104  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||    
T  9353186 caaatagatagcattaattagttttattgaaaaagataagagtaatt 9353140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 121
Target Start/End: Complemental strand, 34889138 - 34889064
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattg 121  Q
    ||||| ||||||||||| ||| || |||| ||||||||| |||||||||||||||||| |||||  |||||||||    
T  34889138 ctttaatttttcaaatatataacaataattagttttattgaaaaagataagagtaattaacaaagagtataattg 34889064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 128
Target Start/End: Complemental strand, 4184755 - 4184685
Alignment:
Q  58 caaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||||| ||||||||||| | ||||||| ||||| |||||||||||||| |||  | ||||||||||||||    
T  4184755 caaatatatagcattaattaattttatttaaaaatataagagtaattgataaatagaataattgacaaatc 4184685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 26252670 - 26252716
Alignment:
Q  87 aaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||||    
T  26252670 aaaaagatacgagtaattgacaaatggtataattgacaaatcgtacc 26252716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 106
Target Start/End: Complemental strand, 7833578 - 7833532
Alignment:
Q  60 aatagatagcattaatcagttttattaaaaaagataagagtaattga 106  Q
    |||| |||| |||||| | ||||||||||||||||||||||||||||    
T  7833578 aataaatagaattaattaattttattaaaaaagataagagtaattga 7833532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 31660569 - 31660518
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagt 100  Q
    |||||||||||||||||||||||||| || ||||||||| ||||| ||||||||    
T  31660569 ctttagtttttcaaatagatagcatt-attagttttattgaaaaa-ataagagt 31660518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 2e-26; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 17201303 - 17201215
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||||   ||||||||||||||| ||||||    
T  17201303 ctttagttttccaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaatgatataattgacaaatcataccct 17201215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 1583535 - 1583448
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||||||||||| ||||||||| ||||||| |||||| |||||||||  |||||||||||||||||||||||    
T  1583535 ctttagttttccaaatagatagcattaattagttttattgaaaaagacaagagt-attgacaaagagtataattgacaaatcgtaccct 1583448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 1590226 - 1590163
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  1590226 ctttagtttttcaaatatatagcattaattagttttattaaaaaagataagagtaattgacaaa 1590163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 12436746 - 12436829
Alignment:
Q  50 tagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||||||  |||||||||| |||| |||||    
T  12436746 tagtttttcaaatagatagcattaattagttttattgaaaaatataagagtaattgacaaagcgtataattgataaattgtacc 12436829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 11992228 - 11992314
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||||| |||||| ||||||||||| | ||||| | |||||||||| ||||||||||| | ||||||||||||||||||||||    
T  11992228 ctttagttttccaaataaatagcattaattaattttactgaaaaagataaaagtaattgacagattgtataattgacaaatcgtacc 11992314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 17202838 - 17202926
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||||||| ||||||| ||||||||| | |||||||| |||||||||||||  |||||||||| ||||| ||||||    
T  17202838 ctttagttttccaaatagataacattaattagttttattgataaagataaaagtaattgacaaagggtataattgaaaaatcataccct 17202926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 36246295 - 36246383
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||| |||||| ||| || ||||||||| |||||||||||||||||||| |||  |||||| ||||||||||||||||    
T  36246295 ctttagttttccaaacagatagtattcattagttttattgaaaaagataagagtaattgagaaagggtataagtgacaaatcgtaccct 36246383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 39614909 - 39614825
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    ||||| ||||||||||| ||||||||||| |||||| || |||||||||||||||||| |||||   ||||||||||||||||||    
T  39614909 ctttaatttttcaaatatatagcattaattagttttgttgaaaaagataagagtaattaacaaaggatataattgacaaatcgta 39614825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 132
Target Start/End: Original strand, 39940319 - 39940404
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttatt-aaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    ||||||| | |||||||||||||||||| ||||||||| |||||| |||||||| |||||||||| |||||||||| |||| ||||    
T  39940319 tttagttatccaaatagatagcattaattagttttattaaaaaaatataagagttattgacaaaaggtataattgataaattgtac 39940404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 128
Target Start/End: Original strand, 13220055 - 13220127
Alignment:
Q  56 ttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||  ||||||| |||||||    
T  13220055 ttcaaatagatagcatgaattagttttattaaaaaagataaaagtagttgacaaaagatataattaacaaatc 13220127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 32717992 - 32718072
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||| ||||||||||| ||||| ||| ||||| |||||| ||| |||||||  |||||||||||||||    
T  32717992 ctttagtttttcaaatatatagcattaattagtttaattgaaaaatataagaataactgacaaagggtataattgacaaat 32718072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 50 - 133
Target Start/End: Original strand, 8544745 - 8544828
Alignment:
Q  50 tagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||||| |||||| ||| | ||||| ||||||||| |||||||||||||||||||||| |   ||||||||||||||||||||    
T  8544745 tagttttccaaataaataacgttaattagttttattgaaaaagataagagtaattgacagatgatataattgacaaatcgtacc 8544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 133
Target Start/End: Complemental strand, 16365797 - 16365722
Alignment:
Q  58 caaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||| |||||| |||| ||||||||| ||||| |||||| |||||||||||| |||||||||||||||| ||||    
T  16365797 caaatatatagcactaattagttttattgaaaaatataagaataattgacaaaaagtataattgacaaatcatacc 16365722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 19803705 - 19803647
Alignment:
Q  77 agttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||||||| |||||||||||||  |||||||||||||||||||||||    
T  19803705 agttttattgaaaaagataaaagtaattgacaaagggtataattgacaaatcgtaccct 19803647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 19931906 - 19931829
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    |||||||||| ||| ||| ||| ||||||||| |||||||||||| |||||||||||  |||||| ||||||||||||    
T  19931906 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatagtataactgacaaatcgta 19931829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 135
Target Start/End: Complemental strand, 28620034 - 28619978
Alignment:
Q  79 ttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||| ||||||||||||||||||||||||  || ||||||||||||||||||||    
T  28620034 ttttattgaaaaagataagagtaattgacaaagggtgtaattgacaaatcgtaccct 28619978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 32474253 - 32474166
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| |||| |||||||||||||||||| ||||||||| ||||| | | |||||||||| |||  ||||||||| |||||||||||||    
T  32474253 ctttaattttccaaatagatagcattaattagttttattgaaaaa-aaatgagtaattgataaagggtataattggcaaatcgtaccct 32474166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 249552 - 249607
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||| ||||||    
T  249552 ctttagttttccaaatatatagcattaattagttttattaaaaaagataggagtaa 249607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 14655004 - 14654941
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||||||||| |||||| ||||||||||| ||||||||| ||||| |||||| |||||||||||    
T  14655004 ctttagttttccaaatatatagcattaattagttttattgaaaaatataagaataattgacaaa 14654941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 19924957 - 19924877
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| ||| ||| ||| ||||||||| |||||||||||| |||||||||||  |||||| | ||||||||||||||    
T  19924957 ttttcaaatatataacatgaattagttttattgaaaaagataagaataattgacaaatggtataact-acaaatcgtaccct 19924877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 120
Target Start/End: Original strand, 36194032 - 36194105
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataatt 120  Q
    ||||| ||||||||||||||| ||||||| ||||| ||| ||||||||||||||| |||| |||  ||||||||    
T  36194032 ctttaatttttcaaatagataacattaattagtttgattcaaaaagataagagtacttgaaaaatggtataatt 36194105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 17591722 - 17591635
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| ||||| |||| ||||| | ||||||||| |||||||||||||||||| | |||  |||||| ||||||||| ||||||    
T  17591722 ctttagttttccaaattgataacattatt-agttttattgaaaaagataagagtaattaagaaatggtataaatgacaaatcataccct 17591635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 36437363 - 36437438
Alignment:
Q  58 caaatagatagcattaatc-agttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||| |||||||||||||  ||||||||| |||||||||||||||||||| |||   ||||||||| |||||||||    
T  36437363 caaagagatagcattaatttagttttattgaaaaagataagagtaattgataaaggatataattgaaaaatcgtac 36437438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 43346682 - 43346737
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    ||||||||||  ||||| ||||||||| | ||||||||||||||||||||||||||    
T  43346682 ctttagttttctaaatatatagcattacttagttttattaaaaaagataagagtaa 43346737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 20201713 - 20201629
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa----ttgacaaaatgtataattgacaaat 127  Q
    |||||||||| |||||| ||| ||||||| ||||||||| ||||| |||| |||||    ||||||||  |||||||||||||||    
T  20201713 ctttagttttccaaatatataacattaattagttttattgaaaaatataaaagtaagaaattgacaaagggtataattgacaaat 20201629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Complemental strand, 17558003 - 17557945
Alignment:
Q  77 agttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||| |||| ||||| |||||| |||||||||||  |||||||||||||||| ||||||    
T  17558003 agttatattgaaaaatataagaataattgacaaagggtataattgacaaatcataccct 17557945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 135
Target Start/End: Original strand, 42674141 - 42674187
Alignment:
Q  89 aaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||||||||||||||  |||| |||||||||| |||||||    
T  42674141 aaagataagagtaattgacaaagggtatcattgacaaattgtaccct 42674187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 84
Target Start/End: Complemental strand, 6428313 - 6428276
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttat 84  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  6428313 ctttaatttttcaaatagatagcattaattagttttat 6428276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 19922207 - 19922151
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||||||||| ||| ||| ||| ||||||||| |||||||||||| ||| |||||||    
T  19922207 ttttcaaatatataacatgaattagttttattgaaaaagataagaataactgacaaa 19922151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 2e-26; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 9089626 - 9089714
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  ||| |||||| ||||||||||||    
T  9089626 ctttaatttttcaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaagggtacaattgataaatcgtaccct 9089714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 50720976 - 50720899
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgaca 124  Q
    |||| |||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  50720976 cttttgtttttcaaatagatagcattaattagttttattgaaaaagataagagtaattgacaaatggtataattgaca 50720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 23529591 - 23529503
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttatt-aaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||| ||||||||||| ||||||||| ||||||||||| ||||||||| |||| |||||||||||||||||||||||    
T  23529591 tttagttttccaaataaatagcattaattagttttattgaaaaaagataaaagtaattgagaaaaggtataattgacaaatcgtaccct 23529503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 2492920 - 2492863
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaatt 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2492920 ctttagtttttcaaatagatagcattaattagttttattaaaaaagataagagtaatt 2492863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 6949154 - 6949085
Alignment:
Q  61 atagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgt 130  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||    
T  6949154 atagatagcattaattagttttattgaaaaagataagagtaattgacaaatggtataattgacaaatcgt 6949085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 131
Target Start/End: Original strand, 19443581 - 19443665
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgta 131  Q
    ||||| |||||||||||||||| |||| | ||||||| |||||||||||| |||||||||||||  |||||||||||||||||||    
T  19443581 ctttaatttttcaaatagatagtattacttagttttactaaaaaagataaaagtaattgacaaagggtataattgacaaatcgta 19443665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 38840428 - 38840508
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||| ||||   ||||||||||||||    
T  38840428 ctttagtttttcaaatagatagcattaattagttttactaaaaaagataaaagtaattgtcaaaggatataattgacaaat 38840508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 45635464 - 45635552
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||| ||||||| ||||||||| ||||| ||||||||||||||||||  |||||||||| ||||||||||||    
T  45635464 ctttagttttccaaatatataacattaattagttttattgaaaaatataagagtaattgacaaatggtataattgataaatcgtaccct 45635552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 45666376 - 45666290
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||| |||| ||||||||||  |||||| ||||||||| |||||||||| |||||||||||||  |||||||||||||||||||||    
T  45666376 ctttaattttccaaatagatattattaataagttttattgaaaaagataaaagtaattgacaaagggtataattgacaaatcgtacc 45666290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 133
Target Start/End: Original strand, 54982766 - 54982852
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    |||||||||| |||||||||||||||| | ||||||||| |||| ||||| |||||||||||||  ||||||||||||||| |||||    
T  54982766 ctttagttttccaaatagatagcattagttagttttattgaaaaggataaaagtaattgacaaagagtataattgacaaattgtacc 54982852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 21956490 - 21956578
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||||||||||| ||  |||||| ||||||||| ||||||||||||||| |||| ||||  ||||| ||||||||||||||||    
T  21956490 ctttagtttttcaaataggtaatattaattagttttattgaaaaagataagagtatttgagaaaagatataagtgacaaatcgtaccct 21956578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 127
Target Start/End: Original strand, 24074131 - 24074203
Alignment:
Q  55 tttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||  |||||||||||||||    
T  24074131 tttcaaatagataacattaattagttttattgaaaaagttaagagtaattgacaaagggtataattgacaaat 24074203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 37209996 - 37210076
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| ||||||||||||||| || ||||||||| |||||||||| | |||||||||||  |||||||||||||||    
T  37209996 ctttagttttccaaatagatagcattgattagttttattgaaaaagataaaaataattgacaaagggtataattgacaaat 37210076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 46195823 - 46195735
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| |||||||||| |||| ||||||| ||||||| | |||||||||| |||||||||||||  ||||||||||||||| |||||||    
T  46195823 ctttaatttttcaaattgataacattaattagttttactgaaaaagataaaagtaattgacaaagggtataattgacaaattgtaccct 46195735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 34032009 - 34032097
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||||  |||||||||  |||||| ||||||||| |||||||||| | ||||| |||||  |||||||||||||||||||||||    
T  34032009 ctttagttttctaaatagataatattaattagttttattgaaaaagataaaactaattaacaaagggtataattgacaaatcgtaccct 34032097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 25493902 - 25493839
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||||||||| |||||||||| ||||||| ||||||||| ||||||||||||||||||| ||||    
T  25493902 ctttagttttccaaatagataacattaattagttttattgaaaaagataagagtaattgtcaaa 25493839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 33889677 - 33889622
Alignment:
Q  48 tttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaat 103  Q
    ||||||||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  33889677 tttagttttccaaatatatagcattaattagttttattaaaaaagataagagtaat 33889622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 52 - 135
Target Start/End: Complemental strand, 38045484 - 38045401
Alignment:
Q  52 gtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||| |||||||||||||||||| | ||||||| ||| | |||||||||||||| |||  |||||||||| ||||||||||||    
T  38045484 gttttccaaatagatagcattaattacttttattgaaagatataagagtaattgataaagggtataattgataaatcgtaccct 38045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 49 - 127
Target Start/End: Complemental strand, 20782543 - 20782465
Alignment:
Q  49 ttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||| |||||| ||||||| || ||||||||| ||||| |||||||||||||| ||| ||||||||||| ||||    
T  20782543 ttagttttttaaataggtagcatttattagttttattgaaaaatataagagtaattgagaaagtgtataattgaaaaat 20782465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Complemental strand, 25490539 - 25490459
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    |||||||||| |||||| ||| ||||||| | ||||||| |||| |||||||||||||||||||  |||||||| ||||||    
T  25490539 ctttagttttccaaatatataacattaattatttttattgaaaatgataagagtaattgacaaatggtataattaacaaat 25490459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 37371417 - 37371504
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||| |||||||||||| ||| ||||||| ||||||||| ||||| |||||| |||||||||||  |||||||||| ||||| ||||||    
T  37371417 ctttggtttttcaaatatatatcattaat-agttttattgaaaaatataagaataattgacaaagggtataattgataaatcataccct 37371504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 38434247 - 38434327
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||| |||||| |||| ||||||||| ||||| |||||| ||||||| |||  |||||||||| ||||    
T  38434247 ctttagtttttcaaatatatagcactaattagttttattgaaaaatataagaataattgataaagggtataattgataaat 38434327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 47 - 102
Target Start/End: Complemental strand, 41502615 - 41502560
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    ||||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||    
T  41502615 ctttagtttttcaaatatataacattaattaattttattaaaaaagataagagtaa 41502560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 50 - 135
Target Start/End: Original strand, 49299875 - 49299961
Alignment:
Q  50 tagtttttcaaatagatagcattaatcagttttatt-aaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||||||||||| |||| || |||| |||| |||||| |||| ||||||| |||||  |||||||||||||||| ||||||    
T  49299875 tagtttttcaaatagataacattgattagttatattgaaaaaaaataaaagtaattaacaaagggtataattgacaaatcctaccct 49299961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 104
Target Start/End: Complemental strand, 2684752 - 2684696
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaatt 104  Q
    |||||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||    
T  2684752 ctttagttttccaaatagatagcatttatc-gttttattgaaaaagataagagtaatt 2684696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 24538316 - 24538404
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||| || |||| ||||||||| ||||| |||||| |||||||||||   | ||||||||||||| ||||||    
T  24538316 ctttagttttccaaatatataacactaattagttttattgaaaaatataagaataattgacaaaggttgtaattgacaaatcataccct 24538404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 106
Target Start/End: Complemental strand, 49263062 - 49263014
Alignment:
Q  58 caaatagatagcattaatcagttttattaaaaaagataagagtaattga 106  Q
    |||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  49263062 caaatagatatcattaattagttttattgaaaaagataagagtaattga 49263014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 102
Target Start/End: Original strand, 668039 - 668094
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaa 102  Q
    |||||||||| |||||| ||| ||||||| ||||||||| ||||||||||||||||    
T  668039 ctttagttttccaaatatataacattaattagttttatttaaaaagataagagtaa 668094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 128
Target Start/End: Original strand, 46196827 - 46196887
Alignment:
Q  69 cattaatcagttttatt-aaaaaagataagagtaattgacaaaatgtataattgacaaatc 128  Q
    ||||||| ||||||||| |||||| ||||||||||||||||||  || |||||||||||||    
T  46196827 cattaattagttttattgaaaaaatataagagtaattgacaaatagtgtaattgacaaatc 46196887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 135
Target Start/End: Original strand, 21342251 - 21342309
Alignment:
Q  77 agttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    ||||||||| |||||||||||||||||| |||||   ||||||||| ||||| ||||||    
T  21342251 agttttattgaaaaagataagagtaattaacaaatgatataattgataaatcataccct 21342309  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 96
Target Start/End: Original strand, 47944479 - 47944516
Alignment:
Q  59 aaatagatagcattaatcagttttattaaaaaagataa 96  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  47944479 aaatagatagcattaataagttttattgaaaaagataa 47944516  T

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Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 29961523 - 29961603
Alignment:
Q  52 gtttttcaaatagatagcattaatcagttttattaaaaaaga-----taagagtaattgacaaaatgtataattgacaaat 127  Q
    ||||||||||||||||| ||| || ||||||||| |||||||     ||||||||||||| |||   ||||||||||||||    
T  29961523 gtttttcaaatagatagtatttattagttttattgaaaaagaggaggtaagagtaattgataaagaatataattgacaaat 29961603  T

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Target: scaffold0005 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 47 - 132
Target Start/End: Complemental strand, 256821 - 256736
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtac 132  Q
    |||||||||| |||||||||| ||||||| ||||||||| ||||||||||||| ||||||||||  ||||||||||||||| ||||    
T  256821 ctttagttttccaaatagataacattaattagttttattgaaaaagataagagaaattgacaaatggtataattgacaaatggtac 256736  T

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Target: scaffold1327 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold1327
Description:

Target: scaffold1327; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 47 - 133
Target Start/End: Complemental strand, 948 - 862
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtacc 133  Q
    ||||| |||| ||| |||||||||| ||| ||||| ||| |||||||||| ||||||||| |||| |||||||||||||||||||||    
T  948 ctttaattttccaactagatagcatcaattagtttcattgaaaaagataaaagtaattgagaaaaggtataattgacaaatcgtacc 862  T

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Target: scaffold0118 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 14995 - 14908
Alignment:
Q  47 ctttagtttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| |||||| ||| ||||||| ||||||||| |||| ||| || ||||||||||||| |||||||||||||||| ||||||    
T  14995 ctttagttttccaaatatataacattaattagttttattgaaaa-gatgagggtaattgacaaaaggtataattgacaaatcataccct 14908  T

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Target: scaffold1130 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1130
Description:

Target: scaffold1130; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 455 - 374
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaaatgtataattgacaaatcgtaccct 135  Q
    |||||||||| ||| ||||||| ||||||||| ||||  |||||| |||||||||||  |||| ||||| ||||| ||||||    
T  455 ttttcaaatatataacattaattagttttattgaaaattataagaataattgacaaagggtatgattgaaaaatcataccct 374  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 46594 - 46650
Alignment:
Q  54 ttttcaaatagatagcattaatcagttttattaaaaaagataagagtaattgacaaa 110  Q
    |||||||||| ||||||||||| | ||||||| ||||  |||||| |||||||||||    
T  46594 ttttcaaatatatagcattaattaattttattgaaaattataagaataattgacaaa 46650  T

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