View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3571_high_10 (Length: 330)

Name: NF3571_high_10
Description: NF3571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3571_high_10
NF3571_high_10
[»] chr3 (33 HSPs)
chr3 (1-324)||(52203477-52203783)
chr3 (21-157)||(45472804-45472942)
chr3 (1-140)||(27163755-27163896)
chr3 (1-175)||(7628816-7628991)
chr3 (194-263)||(52203459-52203528)
chr3 (45-120)||(43472053-43472127)
chr3 (1-173)||(46978982-46979155)
chr3 (11-119)||(36505017-36505127)
chr3 (11-110)||(38489559-38489654)
chr3 (45-147)||(21854054-21854156)
chr3 (45-140)||(21858549-21858644)
chr3 (45-175)||(52695221-52695351)
chr3 (45-122)||(12176452-12176528)
chr3 (18-151)||(51240618-51240752)
chr3 (52-111)||(21842915-21842974)
chr3 (45-120)||(36171907-36171981)
chr3 (45-110)||(2111721-2111785)
chr3 (1-83)||(20178762-20178846)
chr3 (65-105)||(17063819-17063859)
chr3 (1-104)||(20368965-20369071)
chr3 (45-113)||(35433585-35433652)
chr3 (11-147)||(29324413-29324551)
chr3 (45-119)||(16343248-16343321)
chr3 (52-114)||(47014725-47014787)
chr3 (45-110)||(2119214-2119279)
chr3 (24-140)||(31489175-31489292)
chr3 (45-89)||(24121416-24121460)
chr3 (45-155)||(12736808-12736915)
chr3 (1-69)||(35296662-35296732)
chr3 (67-109)||(49508045-49508087)
chr3 (64-129)||(10224169-10224234)
chr3 (58-114)||(22610311-22610367)
chr3 (2-75)||(39614784-39614859)
[»] chr8 (22 HSPs)
chr8 (11-177)||(23877122-23877289)
chr8 (45-175)||(17748432-17748558)
chr8 (45-174)||(11789003-11789130)
chr8 (1-156)||(16591071-16591225)
chr8 (45-147)||(2813419-2813521)
chr8 (21-156)||(24728192-24728328)
chr8 (1-95)||(13003567-13003663)
chr8 (1-175)||(9410189-9410366)
chr8 (45-120)||(37232148-37232223)
chr8 (18-145)||(31430981-31431110)
chr8 (45-127)||(12007077-12007159)
chr8 (58-139)||(39296614-39296695)
chr8 (21-109)||(11755405-11755495)
chr8 (45-156)||(14180468-14180579)
chr8 (45-111)||(9136405-9136471)
chr8 (51-120)||(24888449-24888518)
chr8 (21-105)||(32856224-32856309)
chr8 (66-139)||(31332273-31332346)
chr8 (63-96)||(32425396-32425429)
chr8 (64-129)||(36484458-36484523)
chr8 (77-149)||(11991101-11991173)
chr8 (58-114)||(13422647-13422703)
[»] chr2 (20 HSPs)
chr2 (1-172)||(36467466-36467637)
chr2 (1-176)||(7018146-7018323)
chr2 (21-110)||(40364016-40364107)
chr2 (21-157)||(35306432-35306570)
chr2 (21-120)||(40498828-40498928)
chr2 (4-155)||(26352920-26353070)
chr2 (44-116)||(8948347-8948419)
chr2 (45-155)||(36925885-36925993)
chr2 (21-110)||(5591051-5591142)
chr2 (18-151)||(38595719-38595853)
chr2 (52-140)||(43344555-43344642)
chr2 (46-120)||(14749645-14749718)
chr2 (1-110)||(41324216-41324324)
chr2 (21-163)||(17329059-17329207)
chr2 (1-145)||(30382465-30382610)
chr2 (45-155)||(3353485-3353595)
chr2 (1-92)||(11561978-11562071)
chr2 (45-157)||(11458169-11458280)
chr2 (47-165)||(38141972-38142082)
chr2 (1-95)||(37272614-37272711)
[»] chr1 (28 HSPs)
chr1 (1-175)||(10443754-10443930)
chr1 (45-147)||(22790805-22790906)
chr1 (1-163)||(41827994-41828152)
chr1 (1-174)||(31513254-31513428)
chr1 (45-116)||(31183818-31183889)
chr1 (45-147)||(50709816-50709917)
chr1 (4-176)||(2137127-2137300)
chr1 (21-110)||(11767469-11767560)
chr1 (45-169)||(17116623-17116746)
chr1 (55-174)||(13558703-13558821)
chr1 (45-147)||(46593940-46594041)
chr1 (45-138)||(30193732-30193824)
chr1 (21-110)||(4967030-4967120)
chr1 (1-110)||(25294327-25294437)
chr1 (45-147)||(17936092-17936193)
chr1 (45-110)||(4972762-4972827)
chr1 (1-110)||(49899482-49899593)
chr1 (45-112)||(9380384-9380451)
chr1 (46-82)||(13644144-13644180)
chr1 (67-155)||(51898494-51898581)
chr1 (56-155)||(29488948-29489047)
chr1 (22-104)||(14287365-14287448)
chr1 (3-80)||(38682637-38682716)
chr1 (45-112)||(42603219-42603286)
chr1 (46-83)||(35160468-35160505)
chr1 (64-120)||(28658429-28658485)
chr1 (64-120)||(38949178-38949234)
chr1 (52-156)||(46285771-46285874)
[»] chr4 (35 HSPs)
chr4 (23-175)||(19721333-19721486)
chr4 (23-143)||(53586595-53586716)
chr4 (11-146)||(6008400-6008537)
chr4 (45-146)||(34072678-34072778)
chr4 (4-110)||(40217887-40217995)
chr4 (4-122)||(22198549-22198669)
chr4 (45-143)||(38947541-38947638)
chr4 (1-157)||(2295694-2295850)
chr4 (1-105)||(47922699-47922805)
chr4 (44-115)||(54163089-54163162)
chr4 (50-127)||(42399349-42399426)
chr4 (45-110)||(47724571-47724635)
chr4 (58-116)||(6332305-6332363)
chr4 (2-80)||(22588325-22588405)
chr4 (21-106)||(25059081-25059166)
chr4 (64-149)||(49195925-49196010)
chr4 (1-105)||(7208217-7208324)
chr4 (1-110)||(28101696-28101807)
chr4 (45-80)||(1052556-1052591)
chr4 (1-156)||(2242523-2242683)
chr4 (23-175)||(45774347-45774500)
chr4 (24-103)||(15476442-15476522)
chr4 (55-149)||(44746772-44746866)
chr4 (18-83)||(44987611-44987678)
chr4 (23-84)||(45662010-45662073)
chr4 (48-79)||(1052522-1052553)
chr4 (45-120)||(43770273-43770348)
chr4 (18-109)||(4776091-4776184)
chr4 (44-110)||(25204311-25204377)
chr4 (50-107)||(9656188-9656245)
chr4 (64-129)||(24784965-24785030)
chr4 (64-129)||(24823236-24823301)
chr4 (64-129)||(42630014-42630079)
chr4 (64-120)||(49470782-49470838)
chr4 (23-80)||(53018290-53018349)
[»] chr6 (10 HSPs)
chr6 (45-162)||(8486307-8486423)
chr6 (21-175)||(7435026-7435183)
chr6 (21-110)||(2987953-2988044)
chr6 (23-176)||(2031977-2032130)
chr6 (21-110)||(10229652-10229743)
chr6 (1-109)||(30928570-30928680)
chr6 (46-175)||(22296979-22297113)
chr6 (45-127)||(1929255-1929336)
chr6 (45-138)||(17533111-17533203)
chr6 (47-110)||(12283466-12283529)
[»] chr5 (23 HSPs)
chr5 (1-175)||(19099674-19099849)
chr5 (11-127)||(2627766-2627884)
chr5 (11-163)||(8229486-8229640)
chr5 (21-171)||(31113624-31113776)
chr5 (21-147)||(34764452-34764581)
chr5 (21-176)||(13406942-13407096)
chr5 (45-147)||(39730539-39730641)
chr5 (5-104)||(7057333-7057435)
chr5 (45-175)||(39935983-39936114)
chr5 (48-150)||(26565191-26565293)
chr5 (45-135)||(39329756-39329845)
chr5 (45-110)||(16755761-16755826)
chr5 (45-174)||(32076157-32076286)
chr5 (1-113)||(36906955-36907067)
chr5 (1-112)||(27925799-27925912)
chr5 (45-113)||(7732574-7732641)
chr5 (1-98)||(8802512-8802611)
chr5 (91-175)||(29230720-29230804)
chr5 (58-120)||(18001525-18001587)
chr5 (1-80)||(29230799-29230879)
chr5 (62-120)||(42455124-42455182)
chr5 (64-129)||(26794011-26794076)
chr5 (51-104)||(31210550-31210603)
[»] chr7 (19 HSPs)
chr7 (45-147)||(40837306-40837408)
chr7 (1-175)||(42040084-42040258)
chr7 (1-175)||(43728247-43728423)
chr7 (45-143)||(43495543-43495641)
chr7 (21-175)||(25310636-25310792)
chr7 (1-155)||(22542585-22542737)
chr7 (45-145)||(48138805-48138904)
chr7 (45-120)||(9229313-9229387)
chr7 (43-113)||(44797877-44797947)
chr7 (21-109)||(48153236-48153326)
chr7 (66-155)||(46191908-46191996)
chr7 (48-155)||(47278293-47278400)
chr7 (1-104)||(45492493-45492597)
chr7 (45-112)||(24699962-24700028)
chr7 (64-114)||(3393522-3393572)
chr7 (58-120)||(21180325-21180387)
chr7 (23-110)||(45647920-45648008)
chr7 (1-63)||(47843504-47843568)
chr7 (23-92)||(7858214-7858285)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-120)||(38249-38370)
[»] scaffold0027 (1 HSPs)
scaffold0027 (45-150)||(8997-9102)
[»] scaffold0495 (1 HSPs)
scaffold0495 (21-112)||(6367-6459)
[»] scaffold0051 (1 HSPs)
scaffold0051 (45-127)||(53892-53973)
[»] scaffold0464 (1 HSPs)
scaffold0464 (49-155)||(5813-5917)
[»] scaffold0565 (1 HSPs)
scaffold0565 (45-157)||(8274-8388)


Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 324
Target Start/End: Complemental strand, 52203783 - 52203477
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaa 100  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  52203783 taatgaagggtaattagtgcttattttcttcaagtgttttacatatataagttttagtataaaatttttgttaacgtatcttagccgaatcgtatcctaa 52203684  T
Q  101 attttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcataggctcatatccatcataaaaaatcct 200  Q
    |||||||||| |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||                 | ||||||||||||    
T  52203683 attttaaaaaatttgcgtattcacgtatccgtatcgtatcgtatccgcacccgtatctgtatctgggct-----------------ttataaaaaatcct 52203601  T
Q  201 tattttctcttattttcttctttccgttattttgcttatggttcttttcatctgtgtgtgcaaattgggatgaaatcctaattttctcttactttcttct 300  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  52203600 aattttctcttattttcttctttccgttattttgcttatggttcttttcatctgtgtgtgcaaattgtgatgaaatcctaattttctcttactttcttct 52203501  T
Q  301 ttccgttattttgcctatgcttct 324  Q
    |||||||||||||| |||| ||||    
T  52203500 ttccgttattttgcttatggttct 52203477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 45472804 - 45472942
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    |||||||||||||||  ||||||||  ||||||||||| ||||||  |||||||||| |||||||||| ||||||||||||||||||||||| || || |    
T  45472804 ttattttcttcaagtattttacatacatataagttttaatataaaaattttgttaacatatcttagccatatcgtatcctaaattttaaaaaattcgcat 45472903  T
Q  119 attcacgtatctgtatcgtatcgtacccgcacccgtatc 157  Q
    || | |||| | |||||||||||||| ||||||||||||    
T  45472904 atccgcgtacccgtatcgtatcgtactcgcacccgtatc 45472942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27163896 - 27163755
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||||||| | | || ||||||||||||||   ||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||| |    
T  27163896 taatgaagggtactcaatgattattttcttcaagaattttacatatatataagttttagtataaaatttttgttaacgtatcttagccgtatcgtatctt 27163797  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatc 140  Q
    |||||| |||||||| || ||| ||| ||  |||||||||||    
T  27163796 aaatttaaaaaatttcgcttatccacatacttgtatcgtatc 27163755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 7628991 - 7628816
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || | |||||||||||||| ||||||||  ||||||||| | ||||||||||| ||||||||||| || |||||| |||||||    
T  7628991 taatgaagagtaatcaatgttaattttcttcaagtgttttacatacatataagtttaattataaattttt-gttaacgtatcctaaccgtattgtatcct 7628893  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||||||||| || ||||||   |||| | ||| |||||||||| |||| ||||||| ||||| |||||||||||    
T  7628892 aaattttaaaaaattcgcgtatctgcgtacccgtaccgtatcgtactcgcaaccgtatccgtatcggggcttcatag 7628816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 194 - 263
Target Start/End: Complemental strand, 52203528 - 52203459
Alignment:
Q  194 aaatccttattttctcttattttcttctttccgttattttgcttatggttcttttcatctgtgtgtgcaa 263  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52203528 aaatcctaattttctcttactttcttctttccgttattttgcttatggttcttttcatctgtgtgtgcaa 52203459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 43472053 - 43472127
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  43472053 atataaattttagtataaatattttgttaacgtatcttagccgtatcgtatcct-aattttaaaaattttgcgtat 43472127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 46979155 - 46978982
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| |||||||||| |  |||||||| |||  |||||||| |  ||| ||||| ||||||||||| ||||||||||| |  ||||||| ||||||    
T  46979155 taatgaagagtaattagtgttacttttcttctagtattttacatacagataaattttattataaattttt-gttaacgtatcctgaccgtatcatatcct 46979057  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcat 173  Q
    |||||| ||||| || |||||| | ||||||  |||||||||||||||||||||||||| ||||| | |||||||    
T  46979056 aaatttaaaaaaattcgcgtatccgcgtatccatatcgtatcgtacccgcacccgtatccgtatcggagcttcat 46978982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 119
Target Start/End: Original strand, 36505017 - 36505127
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacatat--ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 108  Q
    |||||| || ||||||||||| |||  |||||||||  ||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| ||    
T  36505017 taattaatgtttattttcttcgagtattttacatatatataagttttagtataaattttttgttaacatatcttagacgtatcgtatcctatattttgaa 36505116  T
Q  109 aattttgcgta 119  Q
    || || |||||    
T  36505117 aaattcgcgta 36505127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 11 - 110
Target Start/End: Complemental strand, 38489654 - 38489559
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||| || |||||||||||||||  ||    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  38489654 taattaatgtttattttcttcaagtattt----tatataagttttagtataaattttttgttaacgtattttaaccgtatcgtatcctaaattttgaaaa 38489559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 21854054 - 21854156
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||| ||||||| |||||||| |||||||||||| |||| ||||||||||||||||| ||| | |||| | |||| | ||||||||||||||    
T  21854054 atataaattttactataaatattttgttatcgtatcttagccatatcatatcctaaattttaaaattttcgtgtatccgcgtacccgtatcgtatcgtac 21854153  T
Q  145 ccg 147  Q
    |||    
T  21854154 ccg 21854156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 140
Target Start/End: Original strand, 21858549 - 21858644
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatc 140  Q
    |||||| ||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||| | | |||| | |||| | ||||||||||    
T  21858549 atataaattttagtataaatattttgttaacgtatcttaactgtatcgtatcctgaattttaaaaatatcgtgtatccgcgtacccgtatcgtatc 21858644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 175
Target Start/End: Complemental strand, 52695351 - 52695221
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||| ||||||||||| ||  |||||| ||||||| ||||| |||||||||| ||||||| ||| | ||||||||||  ||||   ||||||||||||||    
T  52695351 atatgagttttagtatcaaaattttgtcaacgtattttagctgtatcgtatcttaaatttaaaataatttgcgtatttgcgtactcgtatcgtatcgtac 52695252  T
Q  145 ccgcacccgtatctgtatctgggcttcatag 175  Q
    ||||||  ||||| ||| | |||||||||||    
T  52695251 ccgcacttgtatccgtacccgggcttcatag 52695221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 122
Target Start/End: Complemental strand, 12176528 - 12176452
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattc 122  Q
    |||||| |||||||| ||||  ||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||    
T  12176528 atataaattttagtacaaataatttgttaacgtatcttaaccgtatcgtatcct-aattttaaaaatttcgcgtattc 12176452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 51240752 - 51240618
Alignment:
Q  18 tgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 115  Q
    |||||||| |||||||||  |||||| | |||  ||||||||||||||  |||||| || |||||||| ||||||||||||||||| |||||||| || |    
T  51240752 tgcttattatcttcaagtattttacacacatatgagttttagtataaaaattttgtcaatgtatcttaaccgtatcgtatcctaaa-tttaaaaagttcg 51240654  T
Q  116 cgtattcacgtatctgtatcgtatcgtacccgcacc 151  Q
    ||||| | |||| |  |||| |||||||||||||||    
T  51240653 cgtatccgcgtacccatatcatatcgtacccgcacc 51240618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 21842915 - 21842974
Alignment:
Q  52 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaat 111  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||| ||||||||||||    
T  21842915 ttttagtataaatattttgttaacgtatcttagttgtatcgtatcctgaattttaaaaat 21842974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 36171981 - 36171907
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| | |||||||||||  |||||||| ||||||||||| ||||||||||| |||||||||||||||||||||    
T  36171981 atataaatattagtataaataatttgttaaagtatcttagccatatcgtatcct-aattttaaaaattttgcgtat 36171907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 2111721 - 2111785
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||| |||| |||||||| ||||||||| ||||||||||||||||||||||| |||||||||||    
T  2111721 atataaattttggtataaatattttgttaatgtatcttagccgtatcgtatcct-aattttaaaaa 2111785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 20178846 - 20178762
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatctta 83  Q
    ||||||| |||||| | |||||||||| |||||||  ||||||||||||  ||||||| ||||||||||||||| ||||||||||    
T  20178846 taatgaatggtaatcaatgcttatttttttcaagtattttacatatatataagttttaatataaattttttgttgacgtatctta 20178762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 105
Target Start/End: Complemental strand, 17063859 - 17063819
Alignment:
Q  65 tttttgttaacgtatcttagccgtatcgtatcctaaatttt 105  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17063859 tttttgttaacgtatcttagccgtatcgtatcctaaatttt 17063819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 20369071 - 20368965
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatataagttttagtataaa---ttttttgttaacgtatcttagccgtatcgtatcc 97  Q
    |||| ||| ||||| | ||||||||||||||||||  |||| | | |||||||||||||||||   ||| ||||||||| |||||||||||||| ||||     
T  20369071 taataaagagtaatcaatgcttattttcttcaagtattttatacacataagttttagtataaaatttttgttgttaacgaatcttagccgtatcatatct 20368972  T
Q  98 taaattt 104  Q
    |||||||    
T  20368971 taaattt 20368965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 35433585 - 35433652
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattt 113  Q
    |||||| |||||||||||||  |||||||||||||||||  ||||||||||||| ||||||||||||||    
T  35433585 atataaattttagtataaataatttgttaacgtatcttaaacgtatcgtatcct-aattttaaaaattt 35433652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 147
Target Start/End: Original strand, 29324413 - 29324551
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 108  Q
    |||||| || ||||||| |||||||  |||||||  |||||||||| | ||| |||||||||| || ||||| || ||| |||||||||||||||| |||    
T  29324413 taattaatgtttatttttttcaagtattttacatgcatataagtttcattatgaattttttgtcaatgtatcataaccgaatcgtatcctaaatttaaaa 29324512  T
Q  109 aattttgcgtattcacgtatctgtatcgtatcgtacccg 147  Q
     | || |||||| |  ||| | |||||||||||||||||    
T  29324513 taattcgcgtatccgtgtacccgtatcgtatcgtacccg 29324551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 119
Target Start/End: Original strand, 16343248 - 16343321
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgta 119  Q
    |||||| |||||||||||||  |||||| |||||||||| |||||||||||||| ||||| |||||||| |||||    
T  16343248 atataaattttagtataaataatttgttgacgtatcttaaccgtatcgtatcct-aatttaaaaaatttcgcgta 16343321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 47014725 - 47014787
Alignment:
Q  52 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 114  Q
    ||||||| ||||| |||||||||||||| | | |||||||||||||| |||||||||||||||    
T  47014725 ttttagtgtaaatattttgttaacgtatttgatccgtatcgtatccttaattttaaaaatttt 47014787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 2119214 - 2119279
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    ||||||| |||||||||||||||||||| | ||||||||   ||||||||||||||||||| ||||    
T  2119214 atataagctttagtataaattttttgttgatgtatcttaattgtatcgtatcctaaatttttaaaa 2119279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 140
Target Start/End: Complemental strand, 31489292 - 31489175
Alignment:
Q  24 ttttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtatt 121  Q
    |||| |||||||| |||||||  |||| | |||||||||||||  | ||||||||| | |||||||||| ||||||  |||||| ||||||| || |||     
T  31489292 tttttttcaagtgttttacatgcatattaattttagtataaataatgtgttaacgtgtattagccgtattgtatccagaatttt-aaaatttcgcatatc 31489194  T
Q  122 cacgtatctgtatcgtatc 140  Q
    |||||||| ||||||||||    
T  31489193 cacgtatccgtatcgtatc 31489175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 89
Target Start/End: Original strand, 24121416 - 24121460
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgta 89  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||    
T  24121416 atataaattttagtataaatattttgttaacgtatattagccgta 24121460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 12736808 - 12736915
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||||||||  ||||| ||| | ||  ||| |||| |||||| | ||||| |||| |||    
T  12736808 atataagttttagtataaaatttt-gttaccatatcttagccgtatcgtactctaaaattttagaa--ttgtgtatccacgtacccgtatcatatcatac 12736904  T
Q  145 ccgcacccgta 155  Q
    |||||| ||||    
T  12736905 ccgcactcgta 12736915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 35296662 - 35296732
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaatttttt 69  Q
    |||||||||||| | | ||||||||||||||||||  |||||||  || ||| ||||||||||||||||||    
T  35296662 taatgaagggtagtcaatgcttattttcttcaagtattttacatacatgtaaattttagtataaatttttt 35296732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 109
Target Start/End: Complemental strand, 49508087 - 49508045
Alignment:
Q  67 tttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 109  Q
    |||||||| ||||||||| |||||||||| |||||||||||||    
T  49508087 tttgttaaagtatcttagacgtatcgtattctaaattttaaaa 49508045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 10224234 - 10224169
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 129  Q
    |||||| ||||||||||  |||||||||||||| | | |||||||| |||| |||||| |||||||    
T  10224234 ttttttattaacgtatcccagccgtatcgtatcttgatttttaaaatttttccgtattgacgtatc 10224169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Complemental strand, 22610367 - 22610311
Alignment:
Q  58 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 114  Q
    ||||| |||||| ||||||||||| |||||||||||||| | | |||| ||||||||    
T  22610367 tataattttttttttaacgtatctcagccgtatcgtatcttgatttttgaaaatttt 22610311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 39614859 - 39614784
Alignment:
Q  2 aatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaac 75  Q
    ||||||| ||||| | |||||||||||||||| |  |||||||  |||||| ||||| ||||| ||||||||||||    
T  39614859 aatgaagagtaatcaatgcttattttcttcaaatattttacatacatataaattttaatataatttttttgttaac 39614784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 11 - 177
Target Start/End: Complemental strand, 23877289 - 23877122
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 108  Q
    |||||| || |||||||||||||||  ||||| ||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  23877289 taattaatgtttattttcttcaagtattttacttacatataagttgtagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttgaa 23877190  T
Q  109 aattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcataggc 177  Q
    ||  | ||||||   |||||| |||||||||| || ||||||||||||||||||| |||||||||||||    
T  23877189 aaactagcgtatctgcgtatccgtatcgtatc-tatccgcacccgtatctgtatccgggcttcataggc 23877122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 45 - 175
Target Start/End: Complemental strand, 17748558 - 17748432
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||| ||||||||| | | || | |    |||||||||    
T  17748558 atataagttttagtataaattttttgttaacttatcttagccgtattgtatcctaaattttgaaaaatttgcgtatccgcatacccg----gtatcgtac 17748463  T
Q  145 ccgcacccgtatctgtatctgggcttcatag 175  Q
    ||||||||||||| ||||| ||| |||||||    
T  17748462 ccgcacccgtatccgtatccgggattcatag 17748432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 11789130 - 11789003
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||||||||| |||||| |||| ||||||||||| || ||||||||||||||||||||||||||||   |||||   |||| |||||| |||||||||    
T  11789130 atataagttttattataaaatttt-gttaacgtatcctaaccgtatcgtatcctaaattttaaaaattca-cgtatctgcgtacctgtattgtatcgtac 11789033  T
Q  145 ccgcacccgtatctgtatctgggcttcata 174  Q
    ||||||||||||| ||||| ||||||||||    
T  11789032 ccgcacccgtatccgtatcggggcttcata 11789003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16591225 - 16591071
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | | || |||||||||||||  |||||||  |||||||||||| |||||| ||||||||||||||||||| ||||||   | |||    
T  16591225 taatgaagagtaatcaatactgattttcttcaagtattttacatgcatataagttttattataaaatttttgttaacgtatcttaaccgtataaaaccct 16591126  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtat 156  Q
    ||||||||||||||| |||||  |||||||| ||||||||||||||| ||| ||||||    
T  16591125 aaattttaaaaatttcgcgta--cacgtatc-gtatcgtatcgtaccagcatccgtat 16591071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 2813521 - 2813419
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||| ||||||| ||||||||||  |||||||||||||||||||||||||||||||||||| |||||| | |||||| ||||| | ||||||    
T  2813521 atataaattttaatataaatattttgttaacacatcttagccgtatcgtatcctaaattttaaaaatttcgcgtatccgcgtatccgtatcatttcgtac 2813422  T
Q  145 ccg 147  Q
    |||    
T  2813421 ccg 2813419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 21 - 156
Target Start/End: Complemental strand, 24728328 - 24728192
Alignment:
Q  21 ttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    |||||||||||||||  |||||||| |  |||||||||||||||||||||||||||| ||||| || | ||| |||||||||| |||||| | || | ||    
T  24728328 ttattttcttcaagtattttacatacaaataagttttagtataaattttttgttaacttatctcagacttattgtatcctaaa-tttaaataattcgtgt 24728230  T
Q  119 attcacgtatctgtatcgtatcgtacccgcacccgtat 156  Q
    || | |||||| |||| |||||||||||||||| ||||    
T  24728229 atccgcgtatccgtattgtatcgtacccgcacctgtat 24728192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 13003567 - 13003663
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtat 95  Q
    |||||||| ||||| | || ||||||||||||| |  ||||||||  ||||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  13003567 taatgaagagtaatcaatgtttattttcttcaaatattttacatacatataagttttagtataaattttttgttaacgtatcttaggcgtattgtat 13003663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 9410189 - 9410366
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || | |||||||||||||  ||| ||||  ||||||||||| ||||| |||||||||||||||||||| ||||||||||||||    
T  9410189 taatgaagagtaatcaatgttaattttcttcaagtatttttcatacatataagttttattataa-ttttttgttaacgtatcttaaccgtatcgtatcct 9410287  T
Q  99 aaatt--ttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||    |||||  | |||||| |  ||| | ||||||||||||||| |||||| |||| |||||  ||||||||||    
T  9410288 aaattaaaaaaaaaaatcgcgtatccgtgtacccgtatcgtatcgtaccagcacccctatccgtatcgaggcttcatag 9410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 120
Target Start/End: Original strand, 37232148 - 37232223
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| ||||| ||||||| ||||||||||||||||||||| ||||||||| | |||||||||||||| ||||||    
T  37232148 atataaattttaatataaatattttgttaacgtatcttagccatatcgtatcttgaattttaaaaatttcgcgtat 37232223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 18 - 145
Target Start/End: Complemental strand, 31431110 - 31430981
Alignment:
Q  18 tgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 115  Q
    ||||||||||||||||||  |||||||  ||||||||||||||||| |  |||| ||||||||| |||| |||||| | ||||||||||| |||||||||    
T  31431110 tgcttattttcttcaagtattttacatgcatataagttttagtatacaaattttattaacgtattttagtcgtatcatctcctaaattttcaaaattttg 31431011  T
Q  116 cgtattcacgtatctgtatcgtatcgtacc 145  Q
    | |||  ||||  |  ||||||||||||||    
T  31431010 catatgaacgtgcccatatcgtatcgtacc 31430981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 12007077 - 12007159
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 127  Q
    ||||||| ||| |||||||   ||||||||||||||||||  |||||||||||||||||||||| | ||||||||| ||||||    
T  12007077 atataagatttggtataaaaaatttgttaacgtatcttagttgtatcgtatcctaaattttaaatagtttgcgtatccacgta 12007159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 139
Target Start/End: Complemental strand, 39296695 - 39296614
Alignment:
Q  58 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtat 139  Q
    |||||||||||| |||| ||||||||| |||||| |||||||||||| ||||||||||| ||| ||| |||  |||||||||    
T  39296695 tataaattttttattaaggtatcttagtcgtatcatatcctaaatttaaaaaattttgcatatccacatattcgtatcgtat 39296614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 109
Target Start/End: Complemental strand, 11755495 - 11755405
Alignment:
Q  21 ttattttcttcaagtgctttacatat--ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 109  Q
    |||||||||||||||  |||||||    |||||||||| ||||||   ||||||||||||||||||| ||||| |||||||||||||||||    
T  11755495 ttattttcttcaagtattttacatgcgcataagttttaatataaaaaatttgttaacgtatcttagcagtatcatatcctaaattttaaaa 11755405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 45 - 156
Target Start/End: Original strand, 14180468 - 14180579
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| |||||||||||||||||||| | || ||||  ||||||||||||| ||| | ||| | |||| |  ||| |||||||||    
T  14180468 atataaattttagtataaatattttgttaacgtatcttagcagcattgtattttaaattttaaaaaatttacatatccgcgtacccatattgtatcgtac 14180567  T
Q  145 ccgcacccgtat 156  Q
     || ||||||||    
T  14180568 acgtacccgtat 14180579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 9136471 - 9136405
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaat 111  Q
    |||||| |||||||||| || |||||||||||||| ||||  ||||| |||||| ||||||||||||    
T  9136471 atataaattttagtatatatattttgttaacgtattttagatgtatcatatcctgaattttaaaaat 9136405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 51 - 120
Target Start/End: Complemental strand, 24888518 - 24888449
Alignment:
Q  51 gttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||||||||||   |||||||||||||||  | ||||||||||||||||||| ||||  |||||||||    
T  24888518 gttttagtataaaaaatttgttaacgtatctcggtcgtatcgtatcctaaatttaaaaagatttgcgtat 24888449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 105
Target Start/End: Original strand, 32856224 - 32856309
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaatttt 105  Q
    ||||||| |||||||  ||||||||  |||||||||||| |||||    ||||||||||||||||| ||||||||||| ||||||||    
T  32856224 ttattttgttcaagtattttacatacatataagttttag-ataaaaaaattgttaacgtatcttagtcgtatcgtatcataaatttt 32856309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 139
Target Start/End: Complemental strand, 31332346 - 31332273
Alignment:
Q  66 ttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtat 139  Q
    |||||| || ||||||||| |||||| |||| ||||||||||||| || | |||| ||| |||||| |||||||    
T  31332346 ttttgtcaaagtatcttagtcgtatcttatcttaaattttaaaaaattcgtgtatccacatatctgaatcgtat 31332273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Original strand, 32425396 - 32425429
Alignment:
Q  63 attttttgttaacgtatcttagccgtatcgtatc 96  Q
    ||||||| ||||||||||||||||||||||||||    
T  32425396 attttttattaacgtatcttagccgtatcgtatc 32425429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 36484458 - 36484523
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 129  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||  |||||||    
T  36484458 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtatcgacgtatc 36484523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 11991101 - 11991173
Alignment:
Q  77 tatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgca 149  Q
    |||||||||| |||| |||| ||||||||||||||||  ||||| | | ||  ||||||||||| ||||||||    
T  11991101 tatcttagccatatcatatcttaaattttaaaaatttcacgtatccgcatacttgtatcgtatcatacccgca 11991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 58 - 114
Target Start/End: Original strand, 13422647 - 13422703
Alignment:
Q  58 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 114  Q
    ||||| |||||| ||||||||||  |||||||||||||| | | |||||||||||||    
T  13422647 tataatttttttattaacgtatcccagccgtatcgtatcttgatttttaaaaatttt 13422703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 7e-40; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 36467466 - 36467637
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaa 100  Q
    ||||||| |||||| ||||||||||||||||||||| ||||||||||||  ||||||||||||  |||||||||||||| ||||||||||||||||||||    
T  36467466 taatgaaaggtaataagtgcttattttcttcaagtgttttacatatatatattttagtataaaaattttgttaacgtattttagccgtatcgtatcctaa 36467565  T
Q  101 attttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttca 172  Q
    |||||  |||  ||| || | | |||| | ||||| ||||||||| ||| |||||||||||||||| |||||    
T  36467566 atttttgaaaaattgtgtctccgcgtacccgtatcatatcgtacctgcatccgtatctgtatctggacttca 36467637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 7018146 - 7018323
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatat--aagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || |||||||||||||||  |||||||| ||  |||||||||||||||  |||||||||||||||||||||||||||||||||    
T  7018146 taatgaagagtaatcaatgtttattttcttcaagtattttacatacatgtaagttttagtataaaaattttgttaacgtatcttagccgtatcgtatcct 7018245  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatagg 176  Q
    |||||| |||||  |   ||||||   || ||||||| |||||||||| |||||||||   |||| ||||||||||||    
T  7018246 aaatttaaaaaaaatcatgtattcgtatacctgtatcatatcgtacccacacccgtattaatatcagggcttcatagg 7018323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 40364016 - 40364107
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||||  ||||| ||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40364016 ttattttcttcaagtattttacgtacatataagttttagtataaattttttgttaacgtatcttagtcgtatcgtatcctaaattttaaaaa 40364107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 21 - 157
Target Start/End: Original strand, 35306432 - 35306570
Alignment:
Q  21 ttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    |||||||||||||||  |||||||  |||||| ||||||||| | ||||||||||||||||| || ||||||| |||||||||||| | ||| |||||||    
T  35306432 ttattttcttcaagtattttacatgcatataaattttagtattatttttttgttaacgtatcctaaccgtatcatatcctaaatttaataaaatttgcgt 35306531  T
Q  119 attcacgtatctgtatcgtatcgtacccgcacccgtatc 157  Q
    || |||||| | || |||||||||||| |||||||||||    
T  35306532 atccacgtacccgtctcgtatcgtacctgcacccgtatc 35306570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 40498828 - 40498928
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    |||||||||||||||  ||||||||  |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| |||    
T  40498828 ttattttcttcaagtattttacatacatataagttttagtataaatttttt-ttaacgtatcttagctgtatcgtatcctaaattttaaaaaatttccgt 40498926  T
Q  119 at 120  Q
    ||    
T  40498927 at 40498928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 26352920 - 26353070
Alignment:
Q  4 tgaagggtaattagtgcttattttcttcaagtgctttacat-atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaat 102  Q
    ||||| ||||| | |||||||||| |||||||  ||||||| |||||| ||||||||||||| ||||||||||||||||||||||||| ||||||| |||    
T  26352920 tgaagagtaatcaatgcttatttt-ttcaagtattttacatgatataaattttagtataaatattttgttaacgtatcttagccgtatggtatcctgaat 26353018  T
Q  103 tttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 155  Q
    ||| ||||||| | ||||||||||| ||||| | ||| ||| || ||||||||    
T  26353019 ttt-aaaatttcgtgtattcacgtacctgtagcatattgtatccccacccgta 26353070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 44 - 116
Target Start/End: Original strand, 8948347 - 8948419
Alignment:
Q  44 tatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 116  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||    
T  8948347 tatataagttttagtataaattttttgttaacgtatcttagttgtatcatatcctaaattttaaaatttttgc 8948419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 36925885 - 36925993
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| |||| ||||||||||||||||| || |||||||||| ||||| ||||||||||||   |||| | ||||||||||||||    
T  36925885 atataaattttagtataaatattttattaacgtatcttagccg-attgtatcctaaa-tttaataattttgcgtatctgcgtacccgtatcgtatcgtac 36925982  T
Q  145 ccgcacccgta 155  Q
    | |||||||||    
T  36925983 ctgcacccgta 36925993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 5591051 - 5591142
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||||  ||| ||||  |||||||||||||||||||||||| ||||| ||||||| ||| ||||||||||||||||| ||||    
T  5591051 ttattttcttcaagtaatttgcataaatataagttttagtataaattttttattaacatatcttaaccgcatcgtatcctaaatttttaaaa 5591142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 38595853 - 38595719
Alignment:
Q  18 tgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 115  Q
    |||||||| |||||||||  |||||| | |||  ||||||||||||||  |||||| || |||||||| ||||||||||||||||| |||||||| || |    
T  38595853 tgcttattatcttcaagtattttacacacatatgagttttagtataaaaattttgtcaatgtatcttaaccgtatcgtatcctaaa-tttaaaaagttcg 38595755  T
Q  116 cgtattcacgtatctgtatcgtatcgtacccgcacc 151  Q
    ||||| | |||| |  |||| |||||||||||||||    
T  38595754 cgtatccgcgtacccatatcatatcgtacccgcacc 38595719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 52 - 140
Target Start/End: Complemental strand, 43344642 - 43344555
Alignment:
Q  52 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatc 140  Q
    ||||||||||||| |||||||| ||||||||||  ||||||||  |||| |||||||||||| |||||||| | |||||||||||||||    
T  43344642 ttttagtataaatattttgttagcgtatcttagttgtatcgtagtctaa-ttttaaaaatttcgcgtattcgcatatctgtatcgtatc 43344555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 14749645 - 14749718
Alignment:
Q  46 tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    ||||| |||||||||||||  ||| |||||||||||||  ||||||||||||| |||||||||||||||||||||    
T  14749645 tataaattttagtataaataatttcttaacgtatcttactcgtatcgtatcct-aattttaaaaattttgcgtat 14749718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41324216 - 41324324
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||||||||| | || ||||||| |||||||  ||||||||  |||||||||||  |||   ||||| ||||||||||||| ||||||| ||||||    
T  41324216 taatgaagggtaatcaatgtttattttgttcaagtattttacatacatataagttttatcata---ttttttttaacgtatcttaaccgtatcatatcct 41324312  T
Q  99 aaattttaaaaa 110  Q
    ||||||||||||    
T  41324313 aaattttaaaaa 41324324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 21 - 163
Target Start/End: Original strand, 17329059 - 17329207
Alignment:
Q  21 ttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    |||||||||||||||  || ||||| |  ||||||||||||||||   |||||||||||||||  || |||||||||||||||||| ||||| || | ||    
T  17329059 ttattttcttcaagtatttcacatacaaataagttttagtataaaaaatttgttaacgtatctcggctgtatcgtatcctaaatttaaaaaaattcgtgt 17329158  T
Q  119 attc----acgtatctgtatcgtatcgtacccgcacccgtatctgtatc 163  Q
    || |     |||| | ||||||||||||||||||||  |||||||||||    
T  17329159 atccgcgtgcgtacccgtatcgtatcgtacccgcacttgtatctgtatc 17329207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 30382610 - 30382465
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatata--agttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||| ||| ||||||| | ||||||||||||| ||  |||||| | |||  ||||||| |||||   |||||| ||||||| ||||||||||||||| ||    
T  30382610 taataaagagtaattaatacttattttcttcatgtaatttacacacatatgagttttaatataataattttgtcaacgtattttagccgtatcgtattct 30382511  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacc 145  Q
    ||||||||||||  | | |||| |||||| | |||||||||||||||    
T  30382510 aaattttaaaaa-atcgtgtatccacgtacccgtatcgtatcgtacc 30382465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 155
Target Start/End: Original strand, 3353485 - 3353595
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| |||||| |||||| |||| || || ||||||||  ||||| |||||| |||||||| | ||| |||||| ||| || | |||||||| |||||    
T  3353485 atataaattttagcataaatattttctttacatatcttagttgtatcatatcctgaattttaatattttcgcgtatccacatacccgtatcgtaccgtac 3353584  T
Q  145 ccgcacccgta 155  Q
    |||||| ||||    
T  3353585 ccgcactcgta 3353595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 11562071 - 11561978
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcg 92  Q
    |||||||||||||| | ||||||||||||||||||  |||| ||  |||||||| |||||||| |  |||||||||  ||||||| ||||||||    
T  11562071 taatgaagggtaatcaatgcttattttcttcaagtattttatatacatataagtgttagtatacaaattttgttaatatatcttaaccgtatcg 11561978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 11458169 - 11458280
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    ||||||||||| |||||||    ||||||| |||| |||| ||||||||||| | |||||| ||| ||||||||||| || |||  |||||||||| |||    
T  11458169 atataagtttttgtataaaaaaattgttaatgtattttagtcgtatcgtatcttcaatttt-aaatttttgcgtatttacttattcgtatcgtatcatac 11458267  T
Q  145 ccgcacccgtatc 157  Q
    || ||| ||||||    
T  11458268 ccacactcgtatc 11458280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 38141972 - 38142082
Alignment:
Q  47 ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtaccc 146  Q
    |||||||||| |||||||||||  |||||||||| || | ||||| |||||||||||| |||||        | ||||||||| |||| ||||| |||||    
T  38141972 ataagttttattataaattttta-ttaacgtatcctaacggtatcatatcctaaatttaaaaaaa-------aatcacgtatccgtattgtatcttaccc 38142063  T
Q  147 gcacccgtatctgtatctg 165  Q
    ||||||||||| |||||||    
T  38142064 gcacccgtatccgtatctg 38142082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 37272711 - 37272614
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagcc-gtatcgtat 95  Q
    |||||||| ||||| | || | ||||| |||||||  ||||||||  ||||| ||||  |||||||||||||||||||||||||| || |||||||||    
T  37272711 taatgaagagtaatcaatgttcatttttttcaagtattttacatacatataaatttttatataaattttttgttaacgtatcttaacctgtatcgtat 37272614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 6e-34; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 10443754 - 10443930
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||||||| | | ||||||||||||||||||  |||| |||  ||||||||||||||| ||  ||| |||||| |||| |||||||||||||||||    
T  10443754 taatgaagggtagtcaatgcttattttcttcaagtattttatatacatataagttttagtatgaaaatttcgttaacttatcatagccgtatcgtatcct 10443853  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||| ||||| |   ||||| | |||| ||||||||||||||||||||||||||||  ||||| |||||||||||    
T  10443854 aaatttaaaaaaatccacgtatccgcgtacctgtatcgtatcgtacccgcacccgtattcgtatccgggcttcatag 10443930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 22790906 - 22790805
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| | |||||  ||||||||||||||    
T  22790906 atataaattttagtataaatattttgttaaagtatcttagccatatcgtatcct-aattttaaaaattttgcgtatccgcgtattcgtatcgtatcgtac 22790808  T
Q  145 ccg 147  Q
    |||    
T  22790807 ccg 22790805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 41827994 - 41828152
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||||| |||| |||||||||||||  ||||||||  ||||||||||| |||||||||||  ||||| |||||||  |||||||||||||    
T  41827994 taatgaagagtaattaatgctaattttcttcaagtattttacatacatataagttttattataaattttta-ttaacttatcttaatcgtatcgtatcct 41828092  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatc 163  Q
    |||||| ||||| |||| |||| | |||| |     |||||||||||||||||||||||||||||    
T  41828093 aaatttaaaaaaatttgtgtatccgcgtacc-----cgtatcgtacccgcacccgtatctgtatc 41828152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 31513428 - 31513254
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || | |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || |||||| ||||| |    
T  31513428 taatgaagagtaatcaatgttaattttcttcaagtattttacatacatataagttttattataaattttt-gttaacgtatcataaccgtattgtatctt 31513330  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcata 174  Q
    |||||||||||| || ||||||   |||| |||||||||||| ||| |||||  |||||||||||  |||||||||    
T  31513329 aaattttaaaaaattcgcgtatctgcgtacctgtatcgtatcatactcgcacttgtatctgtatcgaggcttcata 31513254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 45 - 116
Target Start/End: Original strand, 31183818 - 31183889
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 116  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31183818 atataaattttagaataaatattttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 31183889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 50709816 - 50709917
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||||| | |||| | |||| | ||||||||||||||    
T  50709816 atataaattttagtataaatattttattaacgtatcttagccgtatcgtatcct-aattttaaaaatttcgtgtatccgcgtacccgtatcgtatcgtac 50709914  T
Q  145 ccg 147  Q
    |||    
T  50709915 ccg 50709917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 176
Target Start/End: Original strand, 2137127 - 2137300
Alignment:
Q  4 tgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 101  Q
    ||||| ||||||| |||||||||| |||||||  |||||||  |||||| ||| || |||||| ||||||||||||||||||| ||||| ||||||||||    
T  2137127 tgaagagtaattaatgcttatttt-ttcaagtattttacatgcatataaattt-agcataaatattttgttaacgtatcttagtcgtattgtatcctaaa 2137224  T
Q  102 ttttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta-tctgtatctgggcttcatagg 176  Q
    | | ||||| |||||||||   |||| | |||||||||||||| | |||||||| | |||||||| ||||||||||    
T  2137225 tataaaaaaatttgcgtatctgcgtaccagtatcgtatcgtactcacacccgtactatgtatctgagcttcatagg 2137300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 11767560 - 11767469
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||||  ||||||||  |||| |||||||||||||  |||||||||||||||||| ||||||||||||||||||||| ||||    
T  11767560 ttattttcttcaagtattttacatacatatatgttttagtataaaaattttgttaacgtatcttaaccgtatcgtatcctaaattttgaaaa 11767469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 45 - 169
Target Start/End: Original strand, 17116623 - 17116746
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||||||| | |||||||||| |||||||||||| || |||||||||||| ||||||| ||||| || |||||| | |||| | ||||||||| ||||    
T  17116623 atataagtttaattataaatttt-tgttaacgtatcctaaccgtatcgtatcttaaatttaaaaaaattcgcgtatccgcgtacccgtatcgtattgtac 17116721  T
Q  145 ccgcacccgtatctgtatctgggct 169  Q
    |||||||| |||| ||||| |||||    
T  17116722 ccgcacccatatccgtatcggggct 17116746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 55 - 174
Target Start/End: Original strand, 13558703 - 13558821
Alignment:
Q  55 tagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgt 154  Q
    |||||||||||||||||| ||||||||||||| ||| |||||||||||||  |||| |   ||||| |||||| ||||||||||||||||| |||||| |    
T  13558703 tagtataaattttttgttcacgtatcttagccatattgtatcctaaatttggaaaa-tccacgtatccacgtacctgtatcgtatcgtacctgcaccctt 13558801  T
Q  155 atctgtatctgggcttcata 174  Q
    ||| ||||  ||||||||||    
T  13558802 atccgtattcgggcttcata 13558821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 46594041 - 46593940
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| |||||||||||||||||| | |||||||||||| |||||||||||||| |||||| |  ||| |  |||||||||||||    
T  46594041 atataaattttagtataaatattttgttaacgtatcttaactgtatcgtatcct-aattttaaaaatttcgcgtatccgtgtacccatatcgtatcgtac 46593943  T
Q  145 ccg 147  Q
    |||    
T  46593942 ccg 46593940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 138
Target Start/End: Original strand, 30193732 - 30193824
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgta 138  Q
    |||||| ||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||| ||| ||||| |||||| | ||||||||    
T  30193732 atataaattttagtataaatattttgttaatgtatcttagccctatcgtatcct-aattttaaaaaatttacgtatccacgtacccgtatcgta 30193824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 4967030 - 4967120
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    ||||||| |||||||| ||||||||  ||||||||||||||||| |||||| |||||||||| |||  ||||||||||||||||||||||||    
T  4967030 ttatttttttcaagtgttttacatacatataagttttagtataattttttt-ttaacgtatcctagttgtatcgtatcctaaattttaaaaa 4967120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25294437 - 25294327
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || | |||||||| ||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  25294437 taatgaagagtaatcaatgttaattttcttgaagtattttacatacatataagttttattataaattttt-gttaacgtatcataaccgtatcgtatcct 25294339  T
Q  99 aaattttaaaaa 110  Q
    ||||||||||||    
T  25294338 aaattttaaaaa 25294327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 17936193 - 17936092
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| ||  |||||||||||||||||||| |||||||| |||||||||||||||| ||||  ||||| |  |||||||||| ||    
T  17936193 atataaattttagtataaatattaggttaacgtatcttagccgtaccgtatcct-aattttaaaaattttgtgtatctacgtaccaatatcgtatcgcac 17936095  T
Q  145 ccg 147  Q
    |||    
T  17936094 ccg 17936092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 4972827 - 4972762
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||||||||  ||||||||||||||| |||  ||||||||||||||||||||||||    
T  4972827 atataagttttagtataaaaattttgttaacgtatcctagttgtatcgtatcctaaattttaaaaa 4972762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49899482 - 49899593
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || |||||||||| ||||  ||||| ||  ||||||||||||||||||| ||| ||||| |||||||| |  |||||||||||    
T  49899482 taatgaagagtaatcaatgtttattttctttaagtattttacttacatataagttttagtataaatatttggttaatgtatcttaactttatcgtatcct 49899581  T
Q  99 aaattttaaaaa 110  Q
    ||||||||||||    
T  49899582 aaattttaaaaa 49899593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 9380451 - 9380384
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 112  Q
    |||||||||||| |||||||||||||||||||||||| || | |||| ||| ||||||||||||||||    
T  9380451 atataagttttaatataaattttttgttaacgtatctaagtcatatcatattctaaattttaaaaatt 9380384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 13644144 - 13644180
Alignment:
Q  46 tataagttttagtataaattttttgttaacgtatctt 82  Q
    |||||||||||||||||||||||||||||||||||||    
T  13644144 tataagttttagtataaattttttgttaacgtatctt 13644180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 67 - 155
Target Start/End: Complemental strand, 51898581 - 51898494
Alignment:
Q  67 tttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 155  Q
    |||||||||| |||||| ||||||| ||||||||||||| |||||||  ||||| || |||   |||| ||||||||||||||||||||    
T  51898581 tttgttaacgaatcttaaccgtatcatatcctaaatttt-aaaatttcacgtatccatgtactcgtattgtatcgtacccgcacccgta 51898494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 155
Target Start/End: Original strand, 29488948 - 29489047
Alignment:
Q  56 agtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 155  Q
    ||||||||| |||||||||||| |  |||||||||| |||| | |||||||||||||| | ||||   ||||  ||||| ||||||||||||||| ||||    
T  29488948 agtataaatattttgttaacgtgttctagccgtatcatatcatgaattttaaaaatttagtgtatatgcgtacttgtattgtatcgtacccgcactcgta 29489047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 14287365 - 14287448
Alignment:
Q  22 tattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattt 104  Q
    ||||||||||||||  |||||||| |  |||||||| ||||||| ||||||||||||| |||| ||| ||||||||| |||||||    
T  14287365 tattttcttcaagtattttacatacaaataagttttggtataaaatttttgttaacgtgtcttggcc-tatcgtatcttaaattt 14287448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 80
Target Start/End: Complemental strand, 38682716 - 38682637
Alignment:
Q  3 atgaagggtaattagtgcttattttcttcaagtgctttacatatat--aagttttagtataaattttttgttaacgtatc 80  Q
    |||||| ||||| | || |||||||||||||||  |||||||||||  |||||||| |||| | ||||||||||||||||    
T  38682716 atgaagagtaatcaatgtttattttcttcaagtattttacatatatttaagttttattatagaatttttgttaacgtatc 38682637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 42603286 - 42603219
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 112  Q
    |||||||||||| ||||||   ||| |||| ||||||||  |||| ||||||||||||||||||||||    
T  42603286 atataagttttattataaacaatttattaatgtatcttaatcgtagcgtatcctaaattttaaaaatt 42603219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 35160468 - 35160505
Alignment:
Q  46 tataagttttagtataaattttttgttaacgtatctta 83  Q
    ||||||||||| ||||||||||||||| ||||||||||    
T  35160468 tataagttttattataaattttttgtttacgtatctta 35160505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 28658485 - 28658429
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||    
T  28658485 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtat 28658429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 38949178 - 38949234
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| ||||||||||  |||||||||||||| ||| |||| |||||||| |||||    
T  38949178 ttttttattaacgtatcccagccgtatcgtatcttaatttttgaaaattttccgtat 38949234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 52 - 156
Target Start/End: Original strand, 46285771 - 46285874
Alignment:
Q  52 ttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacc 151  Q
    ||||| ||||||| ||||||||||||||||||  | |||||||| ||  ||||||||||| | | |||| | |||| |||||||||| |||| || || |    
T  46285771 ttttaatataaatattttgttaacgtatcttaagcatatcgtat-cttgattttaaaaatctcgtgtatccgcgtacctgtatcgtaccgtatccacatc 46285869  T
Q  152 cgtat 156  Q
    |||||    
T  46285870 cgtat 46285874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 175
Target Start/End: Complemental strand, 19721486 - 19721333
Alignment:
Q  23 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || || ||||||||||||||||||||||| |  ||||||    
T  19721486 attttcttcaagtattttacatacatataagttttattataaattttt-gttaacgtatcctaaccatatcgtatcctaaattttaaaaaatccgcgtat 19721388  T
Q  121 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
     | |||| |  |||||||||||||||||||||||||||||||| | |||||||||    
T  19721387 ccgcgtacccatatcgtatcgtacccgcacccgtatctgtatcggagcttcatag 19721333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 53586595 - 53586716
Alignment:
Q  23 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||||||||||  ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| || ||||||    
T  53586595 attttcttcaagtattttacataaatataagttttagtataaattttttgttaacgtatcttagccgtatcgtat-ctaaattttgaaaaattcgcgtat 53586693  T
Q  121 tcacgtatctgtatcgtatcgta 143  Q
     |||||| | |||||||||||||    
T  53586694 ccacgtacccgtatcgtatcgta 53586716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 6008400 - 6008537
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 108  Q
    |||||| || |||||||||||||||  ||||||||  ||||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||| ||    
T  6008400 taattaatgtttattttcttcaagtattttacatacatataagttttaatataaattttttgtttaagtatcttagccgtatcgtatcctaaattttgaa 6008499  T
Q  109 aattttgcgtattcacgtatctgtatcgtatcgtaccc 146  Q
    |  ||  ||||| | | |||||||||||||||||||||    
T  6008500 atattcacgtatccgcatatctgtatcgtatcgtaccc 6008537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 45 - 146
Target Start/End: Complemental strand, 34072778 - 34072678
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||| ||||||  ||||||| ||||||||| ||||    
T  34072778 atataaattttagtataaatattttgttaacgtatcttagccgtatcgtatcct-agttttaaaaatttcgcgtatctacgtatccgtatcgtattgtac 34072680  T
Q  145 cc 146  Q
    ||    
T  34072679 cc 34072678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 40217887 - 40217995
Alignment:
Q  4 tgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 101  Q
    ||||| ||||| | || |||||||||||||||  |||| |||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  40217887 tgaagagtaatcaatgtttattttcttcaagtattttatatacatataagttttagtataaatattttgttaacgtatcttagccgtatcgtatcctaaa 40217986  T
Q  102 ttttaaaaa 110  Q
    ||| |||||    
T  40217987 tttcaaaaa 40217995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 122
Target Start/End: Complemental strand, 22198669 - 22198549
Alignment:
Q  4 tgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 101  Q
    ||||| ||||| | |||||||||| |||||||  |||||||  |||||||||||||||||||| ||||||||||| |||||||||||||| | |||| ||    
T  22198669 tgaagagtaataaatgcttatttttttcaagtattttacatgtatataagttttagtataaatattttgttaacgcatcttagccgtatcttgtcctgaa 22198570  T
Q  102 ttttaaaaattttgcgtattc 122  Q
    ||||||||| || ||||||||    
T  22198569 ttttaaaaacttcgcgtattc 22198549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 38947638 - 38947541
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgta 143  Q
    |||||| ||||||||||||| |||||||||| ||||||| |||||||||||||| ||||||||||||||||| ||| | |||| | |||||||||||||    
T  38947638 atataaattttagtataaatattttgttaacatatcttaaccgtatcgtatcct-aattttaaaaattttgcatatccgcgtacccgtatcgtatcgta 38947541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 2295694 - 2295850
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||||| || | |||||||||||||  |||| |||  ||||||||| | ||||| ||||||||||||||||| || ||||||||||||||    
T  2295694 taatgaagagtaattaatgttgattttcttcaagtattttatatacatataagttt-attataa-ttttttgttaacgtatcctaaccgtatcgtatcct 2295791  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatc 157  Q
    |||||| |||||  | | |||| | |||| | |||||||||| |||| |||||||||||    
T  2295792 aaatttaaaaaaaatcgtgtatccgcgtacccgtatcgtatcttacctgcacccgtatc 2295850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 47922805 - 47922699
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatat--aagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | |||||||||||||||| |  |||| ||| ||  | |||||| ||||||||||||||||||||||| || ||||||||||| ||    
T  47922805 taatgaagagtaatcaatgcttattttcttcaaatattttagatacatgtatgttttattataaattttttgttaacgtatcatatccgtatcgtattct 47922706  T
Q  99 aaatttt 105  Q
    |||||||    
T  47922705 aaatttt 47922699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 54163162 - 54163089
Alignment:
Q  44 tatataagtttta--gtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg 115  Q
    |||||||||||||  |||||||||||||||||| ||||||||||  ||||||||||||| ||||| ||||||||    
T  54163162 tatataagttttatagtataaattttttgttaaagtatcttagctatatcgtatcctaagttttataaattttg 54163089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 127
Target Start/End: Original strand, 42399349 - 42399426
Alignment:
Q  50 agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 127  Q
    ||||||||| ||||  ||||||| ||||||||||| ||||||||||||||||||  |||||||| |||||| ||||||    
T  42399349 agttttagtttaaaaattttgttgacgtatcttagtcgtatcgtatcctaaattaaaaaaatttagcgtatccacgta 42399426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 47724635 - 47724571
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||| |||||||||||||  ||||||||||||| |||||||||||||||||| |||||||||||    
T  47724635 atataaattttagtataaataatttgttaacgtatattagccgtatcgtatcct-aattttaaaaa 47724571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 58 - 116
Target Start/End: Original strand, 6332305 - 6332363
Alignment:
Q  58 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 116  Q
    ||||||| |||||||||| | |||||||||||| |||||||||||||||||| ||||||    
T  6332305 tataaatattttgttaacttttcttagccgtattgtatcctaaattttaaaatttttgc 6332363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 22588325 - 22588405
Alignment:
Q  2 aatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatc 80  Q
    ||||||| ||||| | || |||||||||||||||  |||| |||  ||||||||||||||||| |||||||||||||||||    
T  22588325 aatgaagagtaatcaatgtttattttcttcaagtattttatatacatataagttttagtataatttttttgttaacgtatc 22588405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 25059166 - 25059081
Alignment:
Q  21 ttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaatttta 106  Q
    |||||||||||||||  |||||||| |||   ||||||||||| ||||||||||| |||||||  ||||| |||| ||||||||||    
T  25059166 ttattttcttcaagtattttacatacatataatttagtataaaatttttgttaacatatcttaatcgtattgtattctaaatttta 25059081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 49195925 - 49196010
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgca 149  Q
    |||||||||||  ||||||||||||||||||||||||||||| ||||  ||   |||||| |||| ||| ||||||||||| ||||    
T  49195925 ttttttgttaatatatcttagccgtatcgtatcctaaatttttaaaaacttatatattcatgtatatgtttcgtatcgtactcgca 49196010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7208324 - 7208217
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaatttttt-gttaacgtatcttagccgtatcgtatcc 97  Q
    |||||||| ||||| | || ||||||||||||| |  ||||||||  |||||||||||| |||| |||||| ||||| ||||| || |||||||||||||    
T  7208324 taatgaagagtaatcaatgtttattttcttcaaatattttacatacatataagttttaggataattttttttgttaatgtatcctaaccgtatcgtatcc 7208225  T
Q  98 taaatttt 105  Q
    ||| ||||    
T  7208224 taattttt 7208217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 28101807 - 28101696
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||| ||| ||||| | ||||||||||||||||||  ||| |||  ||||||||||||| || |   ||||| ||| ||||||||| |||||||||||||    
T  28101807 taataaagagtaatcaatgcttattttcttcaagtattttgcatgcatataagttttaggattacaattttggtaatgtatcttagtcgtatcgtatcct 28101708  T
Q  99 aaattttaaaaa 110  Q
    ||||| ||||||    
T  28101707 aaattgtaaaaa 28101696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 80
Target Start/End: Original strand, 1052556 - 1052591
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatc 80  Q
    ||||||||||||||||||||||||||||||||||||    
T  1052556 atataagttttagtataaattttttgttaacgtatc 1052591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 2242683 - 2242523
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| |||||  ||| | |||||||||||||  ||||||||  ||||||||||| |||||||||||  |||| ||||| || | |||| |||||||    
T  2242683 taatgaagagtaatcggtgttaattttcttcaagtattttacatacatataagttttattataaatttttc-ttaatgtatcataac-gtattgtatcct 2242586  T
Q  99 aaattttaaaaattttgcgtattcacgta-----tctgtatcgtatcgtacccgcacccgtat 156  Q
    |||||||||||| |||| |||| ||| ||     | |||||||||||||||||| | ||||||    
T  2242585 aaattttaaaaaatttgtgtatccacatacccgttttgtatcgtatcgtacccgtatccgtat 2242523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 45774347 - 45774500
Alignment:
Q  23 attttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||||| ||||  ||||||||||  ||||| ||| ||||| ||||| ||||| ||||| || ||||| |||||||||||||| || || ||   ||||    
T  45774347 attttcttgaagtattttacatatagataagtattattataagttttt-gttaatgtatcctaaccgtaccgtatcctaaatttaaagaaattcatgtat 45774445  T
Q  121 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
     | |||| | ||||||| |  ||| |||||||||||||||||| |||||||||||    
T  45774446 ccgcgtagccgtatcgtttgatactcgcacccgtatctgtatcggggcttcatag 45774500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 15476522 - 15476442
Alignment:
Q  24 ttttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaatt 103  Q
    ||||||||||||  ||||||||  ||||| ||||| ||||||||||| ||||||||||| || |||||| ||||||||||||    
T  15476522 ttttcttcaagtattttacatacatataaattttattataaattttt-gttaacgtatcctaaccgtattgtatcctaaatt 15476442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 44746772 - 44746866
Alignment:
Q  55 tagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgca 149  Q
    |||||||||| |||||||||||| | ||||  ||| | |||||| ||||||||||||||  | | ||| ||||||||||||||| | ||||||||    
T  44746772 tagtataaatattttgttaacgtgttttagtggtaccatatcctgaattttaaaaatttcactttttctcgtatctgtatcgtaacttacccgca 44746866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 44987611 - 44987678
Alignment:
Q  18 tgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatctta 83  Q
    ||||||||||||||||||  |||||||  |||||||||||||||||    ||||||||||||||||||    
T  44987611 tgcttattttcttcaagtattttacatgaatataagttttagtatatgaattttgttaacgtatctta 44987678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 45662010 - 45662073
Alignment:
Q  23 attttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttag 84  Q
    ||||||||||| |  |||||||  |||||||||||||||||||  |||||||||||||||||||    
T  45662010 attttcttcaaatattttacatgcatataagttttagtataaaaattttgttaacgtatcttag 45662073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 48 - 79
Target Start/End: Original strand, 1052522 - 1052553
Alignment:
Q  48 taagttttagtataaattttttgttaacgtat 79  Q
    ||||||||||||||||||||||||||||||||    
T  1052522 taagttttagtataaattttttgttaacgtat 1052553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 43770348 - 43770273
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| ||||||||||||| || ||||||| ||||||| ||||||  ||| || |||||||| ||||| ||||||    
T  43770348 atataaattttagtataaatattatgttaacatatcttaaccgtattatattctgaattttaagaatttcgcgtat 43770273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 109
Target Start/End: Original strand, 4776091 - 4776184
Alignment:
Q  18 tgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 109  Q
    ||||||||||  ||||||  ||||||||  ||||||||||| ||||||  | || ||||||||| ||||| | ||||||| |||||||||||||    
T  4776091 tgcttatttttatcaagtattttacatacatataagttttaatataaaaatattattaacgtattttagctgcatcgtattctaaattttaaaa 4776184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 25204377 - 25204311
Alignment:
Q  44 tatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    ||||||| |||||||||||| ||||| | || ||||||||  |||||||||| ||||||||| ||||    
T  25204377 tatataaattttagtataaaatttttatcaatgtatcttactcgtatcgtattctaaatttttaaaa 25204311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 9656245 - 9656188
Alignment:
Q  50 agttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaa 107  Q
    |||||||  ||||||||||||||||||||||||| || ||| | ||| ||||||||||    
T  9656245 agttttatcataaattttttgttaacgtatcttaaccatattgaatcttaaattttaa 9656188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Original strand, 24784965 - 24785030
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 129  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||  |||||||    
T  24784965 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtatcaacgtatc 24785030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 24823301 - 24823236
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 129  Q
    |||||| ||||||||||| |||||||||||||| | | |||| |||||||| |||||  |||||||    
T  24823301 ttttttattaacgtatctcagccgtatcgtatcttgatttttgaaaattttccgtatcaacgtatc 24823236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 42630079 - 42630014
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 129  Q
    |||||| ||||||||||| |||||||||||||| ||| |||| ||| |||| |||||  |||||||    
T  42630079 ttttttattaacgtatctcagccgtatcgtatcttaatttttgaaatttttccgtatcgacgtatc 42630014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Original strand, 49470782 - 49470838
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| ||||||||||| |||||||||||||| ||| |||| ||| |||| |||||    
T  49470782 ttttttattaacgtatctcagccgtatcgtatcttaatttttgaaatttttccgtat 49470838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 53018349 - 53018290
Alignment:
Q  23 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatc 80  Q
    |||||||||||||  ||||||||  ||||||||||| ||||| ||||||| |||||||||    
T  53018349 attttcttcaagtattttacatacatataagttttattataatttttttggtaacgtatc 53018290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 45 - 162
Target Start/End: Original strand, 8486307 - 8486423
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||||||||||||||||    |||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||| ||    
T  8486307 atataagttttagtataaa-aaattgttatcgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtatccacgtacccgtatcgtatcgcac 8486405  T
Q  145 ccgcacccgtatctgtat 162  Q
    ||||||| ||||| ||||    
T  8486406 ccgcacctgtatcagtat 8486423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 21 - 175
Target Start/End: Original strand, 7435026 - 7435183
Alignment:
Q  21 ttattttcttcaagtgctttacatatata--agttttagtataaa-ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcg 117  Q
    |||||||||||||||  |||||||| |||  |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| |||| || | |    
T  7435026 ttattttcttcaagtattttacatacatagaagttttagtataaaattttttgttaacgtatcttactcgtatcgtatcctaaattttgaaaaattcgtg 7435125  T
Q  118 tattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    ||||   ||| |  ||||||||||||||||||||| |||||||||  |||||||||||    
T  7435126 tatttgtgtacccctatcgtatcgtacccgcacccatatctgtattcgggcttcatag 7435183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 21 - 110
Target Start/End: Complemental strand, 2988044 - 2987953
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||||  ||||||||  |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  2988044 ttattttcttcaagtattttacatacatataaggtttagtataatgtttttgttaacgtatcttagccgtatcgtatcctaaattttgaaaa 2987953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 23 - 176
Target Start/End: Complemental strand, 2032130 - 2031977
Alignment:
Q  23 attttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||| ||||| ||   |||||||||||||||||| ||||| || ||||||    
T  2032130 attttcttcaagtattttacatacatataagttttattataaattttt-gttaatgtatcctaattgtatcgtatcctaaatttaaaaaaatt-gcgtat 2032033  T
Q  121 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatagg 176  Q
     | | ||   || |||||||||||||||||||||||| ||||  ||||||||||||    
T  2032032 ccgcatactcgtttcgtatcgtacccgcacccgtatccgtattggggcttcatagg 2031977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 10229652 - 10229743
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    ||||||| |||||||  ||||||||  |||| ||||||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||    
T  10229652 ttattttgttcaagtattttacatacatatatgttttagtataaattttttattaacgtatcttagttgtatcgtatcctaaattttgaaaa 10229743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30928570 - 30928680
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatat--ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||||||||| | || |||||||||||||||  |||||||||  ||||||||||||||||| |||||| |||| ||| ||||| |||| ||||| |    
T  30928570 taatgaagggtaatcaatgtttattttcttcaagtattttacatatatataagttttagtataaaatttttgataacctattttagctgtatagtatcat 30928669  T
Q  99 aaattttaaaa 109  Q
    |||||| ||||    
T  30928670 aaatttaaaaa 30928680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 46 - 175
Target Start/End: Complemental strand, 22297113 - 22296979
Alignment:
Q  46 tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattt------taaaaattttgcgtattcacgtatctgtatcgtat 139  Q
    |||||||||||||||||||||||||||||||||||||| | |||   ||||||||||||       |||||| |||||||| |||||| || ||||||||    
T  22297113 tataagttttagtataaattttttgttaacgtatctta-cggtagaatatcctaaatttaaaaaaaaaaaatattgcgtatccacgtacctatatcgtat 22297015  T
Q  140 cgtacccgcacccgtatctgtatctgggcttcatag 175  Q
     ||| ||||| ||||| ||||||| | |||||||||    
T  22297014 ggtatccgcatccgtacctgtatccgagcttcatag 22296979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 1929255 - 1929336
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 127  Q
    |||||| |||||||||||||  ||||||||||||||||| |  ||||||||||| |||||||||||||| |||||||| ||||    
T  1929255 atataaattttagtataaataatttgttaacgtatcttaactatatcgtatcct-aattttaaaaatttcgcgtattcgcgta 1929336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 138
Target Start/End: Complemental strand, 17533203 - 17533111
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgta 138  Q
    |||||| ||||||||||||| |||||| ||||| ||||| |||||||||||||| |||||||||| ||| || ||| | |||| | ||||||||    
T  17533203 atataaattttagtataaatattttgtcaacgtttcttaaccgtatcgtatcct-aattttaaaattttcgcatatccgcgtacccgtatcgta 17533111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 12283529 - 12283466
Alignment:
Q  47 ataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||||||   ||||||| | ||| ||||||||||| ||||||||||||| ||||    
T  12283529 ataagttttagtataaaaactttgttagcatattttagccgtatcatatcctaaatttttaaaa 12283466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 19099849 - 19099674
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| |||||  ||| | |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  19099849 taatgaagagtaatcggtgttaattttcttcaagtattttacatacatataagttttactataaattttt-gttaacgtatcataaccgtatcgtatcct 19099751  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||||||||| || ||||||  ||||| | |||||||||| || || |||||||||| |||||  ||||||||||    
T  19099750 aaattttaaaaaattcgcgtatctacgtacccgtatcgtatcatatccacacccgtatccgtatcaaggcttcatag 19099674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 2627884 - 2627766
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 108  Q
    |||||| || |||||||||| ||||  ||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||    
T  2627884 taattaatgtttattttcttgaagtattttacatacatataagttttagtataaaatttttgttaacgtatcttaaccgtatcgtatcctaaattttaaa 2627785  T
Q  109 aattttgcgtattcacgta 127  Q
    || |||| |||| ||||||    
T  2627784 aaatttgtgtatccacgta 2627766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 163
Target Start/End: Original strand, 8229486 - 8229640
Alignment:
Q  11 taattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaa 108  Q
    |||||| || |||||||||||||||  ||||||||  ||||||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  8229486 taattaatgtttattttcttcaagtattttacatacatataagttttaatataaattttttattaacgtatcttagtcgtatcgtatcctaaattttaaa 8229585  T
Q  109 aattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatc 163  Q
    ||  | ||||||   |||| |  ||||||||| ||| ||||| |||||| |||||    
T  8229586 aaaatcgcgtatatccgtacccatatcgtatcatactcgcactcgtatccgtatc 8229640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 171
Target Start/End: Complemental strand, 31113776 - 31113624
Alignment:
Q  21 ttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    |||||||||||||||  ||| |||| |  |||||||||||||||| |||||||||||||||||  | ||||||||||||||||||| ||||| || | ||    
T  31113776 ttattttcttcaagtattttccatacaaataagttttagtataaaatttttgttaacgtatctcggacgtatcgtatcctaaatttaaaaaaattcgtgt 31113677  T
Q  119 attcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttc 171  Q
    || | |||| |  ||| |||||||||| |||||| |||| ||||| |||||||    
T  31113676 atccgcgtacccatattgtatcgtacctgcacccatatccgtatccgggcttc 31113624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 147
Target Start/End: Complemental strand, 34764581 - 34764452
Alignment:
Q  21 ttattttcttcaagtgctttaca----tatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgc 116  Q
    |||||||||||||||  ||||||    ||||||||||||||||||||  ||| ||||||||||||||| ||||||||||| |||||||| |||| || ||    
T  34764581 ttattttcttcaagtattttacacatatatataagttttagtataaaaattt-gttaacgtatcttagacgtatcgtatcttaaattttgaaaaattcgc 34764483  T
Q  117 gtattcacgtatctgtatcgtatcgtacccg 147  Q
    |||| |||||||| |||||||| | ||||||    
T  34764482 gtatccacgtatccgtatcgtaccttacccg 34764452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 21 - 176
Target Start/End: Complemental strand, 13407096 - 13406942
Alignment:
Q  21 ttattttcttcaagtgctttacatatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    ||||||||||||| |  ||||||||||||||| ||||||||||   || ||| |||||||||||| |||| ||||||||||  ||||||| || || |||    
T  13407096 ttattttcttcaaatattttacatatataagtcttagtataaaaaattcgttgacgtatcttagctgtattgtatcctaaa-gttaaaaaattcgcatat 13406998  T
Q  121 tcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatagg 176  Q
     |||||| | ||||| ||||||| |||||| |||| | |||||||| |||||||||    
T  13406997 ccacgtacccgtatcctatcgtatccgcactcgtacccgtatctggacttcatagg 13406942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 45 - 147
Target Start/End: Complemental strand, 39730641 - 39730539
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||||||||| |||||| ||||||||||| |||| ||   ||||||||||||||||||||||||  |  ||||||| |||| ||||||||||||||||    
T  39730641 atataagttttattataaaatttttgttaacatatcataattgtatcgtatcctaaattttaaaaaaatcacgtattcgcgtacctgtatcgtatcgtac 39730542  T
Q  145 ccg 147  Q
    |||    
T  39730541 ccg 39730539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 7057333 - 7057435
Alignment:
Q  5 gaagggtaattagtgcttattttcttcaa-gtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa 101  Q
    |||| ||||| | |||||||||||||||| ||  ||||||||  ||||| |||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  7057333 gaagagtaatcaatgcttattttcttcaaagtattttacatacatataaattttagtataaaatttttgctaacgtatcttaaccgtatcgtatcctaaa 7057432  T
Q  102 ttt 104  Q
    |||    
T  7057433 ttt 7057435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 175
Target Start/End: Original strand, 39935983 - 39936114
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttg-cgtattcacgtatctgtatcgtatcgta 143  Q
    |||| ||||||||||||||   ||||| ||||||||||||| ||||||||||||||||||||||||  ||  ||||| | ||||   ||||| |||||||    
T  39935983 atatgagttttagtataaaaagtttgtcaacgtatcttagctgtatcgtatcctaaattttaaaaaaattcacgtatccgcgtactcgtatcatatcgta 39936082  T
Q  144 cccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||||||||||  ||| | |||||||||||    
T  39936083 cccgcacccgtattcgtacccgggcttcatag 39936114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 48 - 150
Target Start/End: Original strand, 26565191 - 26565293
Alignment:
Q  48 taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccg 147  Q
    ||||||||||||| || ||||||||||||||||||| | ||||||||||||||||||| |||| || | |||| |  ||||| |||| ||||| ||||||    
T  26565191 taagttttagtattaaatttttgttaacgtatcttaactgtatcgtatcctaaatttttaaaaattcgtgtatccgtgtatccgtattgtatcttacccg 26565290  T
Q  148 cac 150  Q
    |||    
T  26565291 cac 26565293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 45 - 135
Target Start/End: Original strand, 39329756 - 39329845
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatc 135  Q
    |||||||||||||||||||  | |||||||||||| |||||||||||||||| |||| |||| |||||||| |||| | | ||||||||||    
T  39329756 atataagttttagtataaaaatcttgttaacgtattttagccgtatcgtatcttaaa-tttataaattttgtgtatccgcatatctgtatc 39329845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 16755826 - 16755761
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||| ||||||||||||||||||||||||||||||||   ||||||||||  ||||||||||||    
T  16755826 atataaattttagtataaattttttgttaacgtatcttaattgtatcgtatctcaaattttaaaaa 16755761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 45 - 174
Target Start/End: Complemental strand, 32076286 - 32076157
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||| ||||||||||||| |||||| | |||||||||||| |||||| |||||||||||| ||||| |    |||| |   |||  |||||||||| |||    
T  32076286 atatgagttttagtataatttttttttcaacgtatcttagtcgtatcatatcctaaatttaaaaaaatacatgtatccgtatattcgtatcgtatcatac 32076187  T
Q  145 ccgcacccgtatctgtatctgggcttcata 174  Q
    ||||| |||||||| |||| ||||||||||    
T  32076186 ccgcatccgtatctatatccgggcttcata 32076157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 36906955 - 36907067
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||||  | |||||||||||||||   |||||||  |||||| ||||||||||||   ||||||||||||||||||||||||  | ||||    
T  36906955 taatgaagagtaattgatccttattttcttcaagaattttacatgcatataaattttagtataaaaaatttgttaacgtatcttagccgtat--tgtcct 36907052  T
Q  99 aaattttaaaaattt 113  Q
    ||||||| |||||||    
T  36907053 aaatttttaaaattt 36907067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 27925799 - 27925912
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||||||| | | |||||||||| |||||||  ||||||||  ||||||||||| | ||||   ||||||||||||||||||| || |||||| ||    
T  27925799 taatgaagggtagtcaatgcttatttttttcaagtattttacatacatataagttttattgtaaaaaatttgttaacgtatcttagcagtgtcgtattct 27925898  T
Q  99 aaattttaaaaatt 112  Q
     ||||| |||||||    
T  27925899 caatttaaaaaatt 27925912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 45 - 113
Target Start/End: Original strand, 7732574 - 7732641
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattt 113  Q
    |||||| ||||||||||||| |||| ||||| ||| ||| |||||||||||||| ||||||||||||||    
T  7732574 atataaattttagtataaatatttt-ttaacatatattaaccgtatcgtatcctgaattttaaaaattt 7732641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8802611 - 8802512
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | |||||||||| || || |  |||||||  |||||||||||||||||| |||||||||||||||| |||   ||||||||||||    
T  8802611 taatgaagagtaataaatgcttattttttttaaatattttacatgtatataagttttagtataatttttttgttaacgtattttatttgtatcgtatcct 8802512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 29230804 - 29230720
Alignment:
Q  91 cgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||||||||||| ||||| || |||||| | |||| | |||| ||||| ||||||||||| ||| |||| | |||||||||||    
T  29230804 cgtatcctaaatttaaaaaaattcgcgtatccgcgtacccgtattgtatcatacccgcacccatatttgtaacggggcttcatag 29230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Complemental strand, 18001587 - 18001525
Alignment:
Q  58 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    ||||| |||||| |||||||||| ||||||||||||||| | | ||||||||| ||| |||||    
T  18001587 tataatttttttattaacgtatcctagccgtatcgtatcttgatttttaaaaaatttccgtat 18001525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 29230879 - 29230799
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatc 80  Q
    |||||||| ||||| | || | |||||||||||||  ||||||||  ||||||||||| ||||||| |||||||||||||||    
T  29230879 taatgaagagtaatcaatgttaattttcttcaagtattttacatacatataagttttattataaat-ttttgttaacgtatc 29230799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 120
Target Start/End: Original strand, 42455124 - 42455182
Alignment:
Q  62 aattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||||| |||| |||||| ||||| |||||||| |||||||||||| |||| |||||    
T  42455124 aattttttattaaagtatctcagccgcatcgtatcttaaattttaaaatttttccgtat 42455182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 26794076 - 26794011
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatc 129  Q
    |||||| ||||||||||  |||||||||||||| | | |||||||| |||| |||||| |||||||    
T  26794076 ttttttattaacgtatcccagccgtatcgtatcttgatttttaaaatttttccgtattgacgtatc 26794011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Complemental strand, 31210603 - 31210550
Alignment:
Q  51 gttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattt 104  Q
    |||||| ||||||||||||||||| |||||| ||   |||||||||||||||||    
T  31210603 gttttactataaattttttgttaatgtatctaagatatatcgtatcctaaattt 31210550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 9e-30; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 40837306 - 40837408
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||  |||| || |||| ||||||||||||||    
T  40837306 atataagttttagtataaattttttgttaatgtatcttaaccgtatcgtatcctaaatttaaaaaaatttgtatatttacatatccgtatcgtatcgtac 40837405  T
Q  145 ccg 147  Q
    |||    
T  40837406 ccg 40837408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 42040258 - 42040084
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | || | |||||||||||||  ||||||||  ||||||||||| ||||||||||| ||||||||||| || ||||||||||||||    
T  42040258 taatgaagagtaatcaatgttaattttcttcaagta-tttacatacatataagttttattataaattttt-gttaacgtatcctaaccgtatcgtatcct 42040161  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||| ||||| | ||| ||| | | || | ||||||||||| ||||||||||||||| |||||  ||||||||||    
T  42040160 aaatttaaaaaaatatgcatatccgcatacccgtatcgtatcgcacccgcacccgtatccgtatcgtggcttcatag 42040084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 43728247 - 43728423
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||| ||| ||||| |||| |||||||||| ||||  || |||||  |||||| |||||||||||   ||||| |||||||| |||||||||||||| ||    
T  43728247 taattaagagtaatcagtgtttattttctttaagtatttcacatacatataagatttagtataaaaaatttgtcaacgtatcctagccgtatcgtattct 43728346  T
Q  99 aaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    |||||| ||||| || |||||| |||||| | ||||| |||| |||| |||| |||||||||||| |||||||||||    
T  43728347 aaatttaaaaaaattcgcgtatccacgtacccgtatcatatcctacctgcactcgtatctgtatccgggcttcatag 43728423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 45 - 143
Target Start/End: Complemental strand, 43495641 - 43495543
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgta 143  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||  |||| ||||||||||||| | ||||||||| | || ||||||| |||||||    
T  43495641 atataagttttagtataaaatttttgttaacgtatcttaaccgtattatatcttaaattttaaaaagtctgcgtattcgcatacctgtatcatatcgta 43495543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 175
Target Start/End: Complemental strand, 25310792 - 25310636
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgt 118  Q
    ||||||||||||| |  ||||||||  |||||||||||||||||  ||||||||||||||||||| | |||||||||||||||||| ||||| || | ||    
T  25310792 ttattttcttcaaatattttacatacatataagttttagtataatatttttgttaacgtatcttaactgtatcgtatcctaaatttaaaaaaattcgagt 25310693  T
Q  119 attcacgtatctgtatcgtatcgtacccgcacccgtatctgtatctgggcttcatag 175  Q
    || |  ||  |  |||||||||||||| |||||| ||||  |||| |||||||||||    
T  25310692 atccgtgtgcccatatcgtatcgtaccggcacccatatcattatccgggcttcatag 25310636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 22542737 - 22542585
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatatat-aagttttagtataaattttttgttaacgtatcttagccgtatcgtatccta 99  Q
    |||||||| ||||| | || |||||||||||||||  |||| ||| || |||||||| |||| |||||||||||| ||||||||||| |||||||| |||    
T  22542737 taatgaagagtaatcaatgtttattttcttcaagtattttatatacattaagttttattatatattttttgttaatgtatcttagccatatcgtattcta 22542638  T
Q  100 aattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 155  Q
    ||||| ||||  ||  ||||  | |||||| |||||||||||||||||||||||||    
T  22542637 aatttaaaaatattcacgta--ctcgtatc-gtatcgtatcgtacccgcacccgta 22542585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 48138805 - 48138904
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||| ||||||||||||| ||||||||| |||||||||||||||||| |||  |||||||||| ||| ||||||  ||||| | ||||||||||||||    
T  48138805 atataaattttagtataaatattttgttaatgtatcttagccgtatcgtttcc-gaattttaaaattttcgcgtatctacgtacccgtatcgtatcgtac 48138903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 120
Target Start/End: Complemental strand, 9229387 - 9229313
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    |||||| |||||||||||||  |||||||||||||||||||||||||||||| | |||||||||||||| ||||||    
T  9229387 atataaattttagtataaataatttgttaacgtatcttagccgtatcgtatcat-aattttaaaaatttcgcgtat 9229313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 43 - 113
Target Start/End: Complemental strand, 44797947 - 44797877
Alignment:
Q  43 atatataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattt 113  Q
    |||||||| |||||||| |||| |||||||||||||||||||  |||| ||||||||||||||||||||||    
T  44797947 atatataaattttagtagaaatattttgttaacgtatcttagatgtatggtatcctaaattttaaaaattt 44797877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 109
Target Start/End: Original strand, 48153236 - 48153326
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaa 109  Q
    |||||| ||||||||  ||||||||  ||||| |||||||||||| ||||||||||| ||| || |||||||| |||||||||||||||||    
T  48153236 ttatttacttcaagtattttacatacatataaattttagtataaaatttttgttaacatattttggccgtatcatatcctaaattttaaaa 48153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 66 - 155
Target Start/End: Complemental strand, 46191996 - 46191908
Alignment:
Q  66 ttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccgcacccgta 155  Q
    |||||||||||||||||||  |||| ||||||||| |||||||||||| | |||| | | ||||  ||||||||||||||||||| ||||    
T  46191996 ttttgttaacgtatcttagttgtattgtatcctaa-ttttaaaaatttcgtgtatccgcatatccatatcgtatcgtacccgcactcgta 46191908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 155
Target Start/End: Original strand, 47278293 - 47278400
Alignment:
Q  48 taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccg 147  Q
    |||||||||||| |||||||||||||||||||| |||| | ||  | ||||||||||||||| || |  |||| |   ||| |||||| ||||||||| |    
T  47278293 taagttttagtagaaattttttgttaacgtatcgtagcagcattatctcctaaattttaaaatttctatgtatccgtatatttgtatcatatcgtaccag 47278392  T
Q  148 cacccgta 155  Q
    ||||||||    
T  47278393 cacccgta 47278400  T

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Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 45492493 - 45492597
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||| ||||| | ||  ||||||||||||||  |||||||| |  |||||||| |||||||||||||||||| || |||| ||| ||||||| |||    
T  45492493 taatgaagagtaatcaatgtatattttcttcaagtattttacatacaaataagttttggtataaattttttgttaaagtgtcttggcc-tatcgtaccct 45492591  T
Q  99 aaattt 104  Q
    ||||||    
T  45492592 aaattt 45492597  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 112
Target Start/End: Original strand, 24699962 - 24700028
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 112  Q
    |||||| ||||||||||||| |||| ||||||||||||   |||||| |||||| |||||||||||||    
T  24699962 atataaattttagtataaatatttttttaacgtatcttgaacgtatcatatcct-aattttaaaaatt 24700028  T

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Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 114
Target Start/End: Original strand, 3393522 - 3393572
Alignment:
Q  64 ttttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatttt 114  Q
    ||||||||| | |||||  |||||||||||||||| |||||||||||||||    
T  3393522 ttttttgttgaagtatcacagccgtatcgtatcctgaattttaaaaatttt 3393572  T

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Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 21180325 - 21180387
Alignment:
Q  58 tataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtat 120  Q
    ||||| |||||| ||||||| ||| |||||||||||||| |||||||| ||| |||| |||||    
T  21180325 tataatttttttattaacgtttctcagccgtatcgtatcttaaattttgaaagttttccgtat 21180387  T

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Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 110
Target Start/End: Complemental strand, 45648008 - 45647920
Alignment:
Q  23 attttcttcaagtgctttacatata--taagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaa 110  Q
    |||||||||||||  ||||||||||  ||||||||| ||||||||||| ||| | ||||| || | ||| |||||||||||||| |||||    
T  45648008 attttcttcaagtattttacatatagataagttttattataaattttt-gttcatgtatcctaactgtaccgtatcctaaatttaaaaaa 45647920  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47843568 - 47843504
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacat--atataagttttagtataaa 63  Q
    |||||||||||||| | || |||||||||||||||  |||||||  |||||||||||| ||||||    
T  47843568 taatgaagggtaatcaatgtttattttcttcaagtattttacatacatataagttttattataaa 47843504  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 23 - 92
Target Start/End: Original strand, 7858214 - 7858285
Alignment:
Q  23 attttcttcaagtgctttacat--atataagttttagtataaattttttgttaacgtatcttagccgtatcg 92  Q
    |||||||||||||  |||||||  |||||||||||| ||||||   ||||||||||||||| |||| |||||    
T  7858214 attttcttcaagtattttacatgcatataagttttaatataaaagatttgttaacgtatctaagccatatcg 7858285  T

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Target: scaffold0015 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38370 - 38249
Alignment:
Q  1 taatgaagggtaattagtgcttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcct 98  Q
    |||||||||||||| | || |||||||||||||||  ||||||||  ||||||||||| ||||||   ||||||||||||||||||||||||  ||||||    
T  38370 taatgaagggtaatcaatgtttattttcttcaagtattttacatacatataagttttaatataaaaaatttgttaacgtatcttagccgtattttatcct 38271  T
Q  99 aaattttaaaaattttgcgtat 120  Q
     ||||| ||||| || ||||||    
T  38270 taatttaaaaaaattcgcgtat 38249  T

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Target: scaffold0027 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 150
Target Start/End: Original strand, 8997 - 9102
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgtatctgtatcgtatcgtac 144  Q
    |||||||||||| ||||||  ||||||||| |||| ||| || |||||||||||||||||||||||||| || ||||  ||||||| |||| ||| |||     
T  8997 atataagttttaatataaaaattttgttaatgtatattaaccttatcgtatcctaaattttaaaaatttcgcatatttgcgtatctatatcttatagtat 9096  T
Q  145 ccgcac 150  Q
    ||||||    
T  9097 ccgcac 9102  T

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Target: scaffold0495 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 6367 - 6459
Alignment:
Q  21 ttattttcttcaagtgctttacata--tataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaatt 112  Q
    ||||||| |||||||  ||||||||  |||| ||||||||||||||||||  ||||||||||||||  ||||||||||||||||||| ||||||    
T  6367 ttattttgttcaagtattttacatacatatatgttttagtataaattttta-ttaacgtatcttagttgtatcgtatcctaaattttgaaaatt 6459  T

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Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 45 - 127
Target Start/End: Original strand, 53892 - 53973
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaattttaaaaattttgcgtattcacgta 127  Q
    |||||| |||||||||||||  |||||| || ||||||| |||||||||||||| ||||| ||||| ||||||||||| ||||    
T  53892 atataaattttagtataaataatttgttgacatatcttaaccgtatcgtatcct-aatttaaaaaaatttgcgtattcgcgta 53973  T

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Target: scaffold0464 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 155
Target Start/End: Complemental strand, 5917 - 5813
Alignment:
Q  49 aagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaa-attttaaaaattttgcgtattcacgtatctgtatcgtatcgtacccg 147  Q
    ||||||||||||||| ||||||||| | |||||||||| |||||||| |||| |||||| ||   ||| |||| |||||| | ||||| |||||||||||    
T  5917 aagttttagtataaaatttttgttaccatatcttagccatatcgtattctaagattttagaa---ttgtgtatccacgtacccgtatcatatcgtacccg 5821  T
Q  148 cacccgta 155  Q
    ||| ||||    
T  5820 cactcgta 5813  T

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Target: scaffold0565 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 157
Target Start/End: Original strand, 8274 - 8388
Alignment:
Q  45 atataagttttagtataaattttttgttaacgtatcttagccgtatcgtatcctaaa---ttttaaaaattttgcgtattcacgtatctgtatcgtatcg 141  Q
    |||||| ||||| |||||||||| ||||||||||||||| |||||||||||| ||||   |   |||||    | |||| | |||||| |||||||||||    
T  8274 atataacttttattataaatttt-tgttaacgtatcttaaccgtatcgtatcttaaaccctaaaaaaaaaaacgtgtatccgcgtatccgtatcgtatcg 8372  T
Q  142 tacccgcacccgtatc 157  Q
    ||||||||||||||||    
T  8373 tacccgcacccgtatc 8388  T

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