View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3571_low_8 (Length: 357)
Name: NF3571_low_8
Description: NF3571
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3571_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 85 - 350
Target Start/End: Original strand, 28530186 - 28530451
Alignment:
| Q |
85 |
tggtcgatatgataacgggtaataacaataatccaaagaaagagtttggttttgcaaatgaaaacaacaatgattcaccaacagcatcaccaagaggtgt |
184 |
Q |
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| T |
28530186 |
tggtcgatatgataacgggtaataacaataatccaaagaaagagtttggttttgcaaatgaaaacaacaatgattcaccaacagcatcaccaagaggtgt |
28530285 |
T |
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| Q |
185 |
atttgaggtacctatttcagattccgacagcacggggagcagcaactacagcaatggaggtaaaccatcatcaccaggaggaggagatggagggcaccaa |
284 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28530286 |
atttgaggtacctatttcggattccgacagcacggggagcagcaactacagcaatggaggtaaaccatcatcaccaggaggaggagatggagggcaccaa |
28530385 |
T |
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| Q |
285 |
tggaaggctatgattgatgcattgaggtttaagtctgtgaggagattttctaccattcctttgctt |
350 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
28530386 |
tggaaggctatgattgatgcattgaggtttaagtctgtgaggagattttctagcattcctttgctt |
28530451 |
T |
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