View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3572_high_28 (Length: 206)
Name: NF3572_high_28
Description: NF3572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3572_high_28 |
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Alignment Details
Target: chr4 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 44166580 - 44166777
Alignment:
| Q |
1 |
gaaccactgcacaccaaatcagataccacagccaaacacaatatagactttgtgtgaccacgtagagcacctatgactatcaaattaccattttcacctt |
100 |
Q |
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| T |
44166580 |
gaaccactgcacaccaaatcagaaaccacagccaaacacaatatagactttgtgtgaccacgtagagcacctatgactatcaaattaccattttcacctt |
44166679 |
T |
|
| Q |
101 |
tttcagataccaatattgatctatcacatgcaccggaatacaaaaccgaaccgtcactgttaagagccaatgcattaatcccagatctgtgctcctcc |
198 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
44166680 |
tttcagataccaatattgatctatcacatgcaccggaatacaaaaccgaaccgtcactgttaagagccaatgcattaatcccagatctgtgcttctcc |
44166777 |
T |
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