View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3572_high_8 (Length: 346)
Name: NF3572_high_8
Description: NF3572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3572_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 327; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 4 - 330
Target Start/End: Original strand, 46894707 - 46895033
Alignment:
| Q |
4 |
agagagaaatgagtagaaaatgaaggatggaaatagaagccatgttggtgtgtatagaaagatgtgttgagttgatcaagttagtgaattacactatata |
103 |
Q |
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| T |
46894707 |
agagagaaatgagtagaaaatgaaggatggaaatagaagccatgttggtgtgtatagaaagatgtgttgagttgatcaagttagtgaattacactatata |
46894806 |
T |
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| Q |
104 |
tagagagggaccgtttttaataagcggcagagattgtgacattattttggaagtgtttgatggttatgaatttccagaataatgttgggatggattgatg |
203 |
Q |
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| T |
46894807 |
tagagagggaccgtttttaataagcggcagagattgtgacattattttggaagtgtttgatggttatgaatttccagaataatgttgggatggattgatg |
46894906 |
T |
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| Q |
204 |
aacttgagattaataagaaaacaaactggtggtgagtgtgaggggttgagggttacttggcagctaagaggaaaagcttagttgcatggtgtgcagtttt |
303 |
Q |
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| T |
46894907 |
aacttgagattaataagaaaacaaactggtggtgagtgtgaggggttgagggttacttggcagctaagaggaaaagcttagttgcatggtgtgcagtttt |
46895006 |
T |
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| Q |
304 |
catttgttttatgtaatgtaaaggaaa |
330 |
Q |
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| T |
46895007 |
catttgttttatgtaatgtaaaggaaa |
46895033 |
T |
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