View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3572_low_13 (Length: 294)

Name: NF3572_low_13
Description: NF3572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3572_low_13
NF3572_low_13
[»] scaffold0182 (1 HSPs)
scaffold0182 (219-294)||(26358-26433)
[»] chr7 (22 HSPs)
chr7 (219-294)||(29059832-29059907)
chr7 (221-294)||(8839322-8839395)
chr7 (221-294)||(31492130-31492203)
chr7 (186-287)||(28537424-28537524)
chr7 (221-294)||(13254142-13254215)
chr7 (219-290)||(46373704-46373775)
chr7 (219-294)||(19477288-19477363)
chr7 (231-294)||(2657887-2657950)
chr7 (219-294)||(21747079-21747153)
chr7 (217-292)||(24172236-24172313)
chr7 (234-294)||(27484103-27484163)
chr7 (220-283)||(40099312-40099375)
chr7 (235-294)||(40211980-40212039)
chr7 (235-284)||(4059748-4059797)
chr7 (172-287)||(20207531-20207649)
chr7 (240-291)||(12142656-12142707)
chr7 (219-264)||(14545000-14545045)
chr7 (221-294)||(23933692-23933765)
chr7 (235-284)||(31717920-31717969)
chr7 (235-287)||(7265368-7265420)
chr7 (219-279)||(11486783-11486843)
chr7 (33-65)||(42841850-42841882)
[»] chr4 (24 HSPs)
chr4 (219-294)||(14854632-14854707)
chr4 (219-294)||(31307105-31307180)
chr4 (219-293)||(46016177-46016251)
chr4 (186-294)||(38766116-38766227)
chr4 (219-294)||(45994549-45994624)
chr4 (219-293)||(46250594-46250668)
chr4 (226-291)||(9012300-9012365)
chr4 (238-294)||(11140484-11140540)
chr4 (219-294)||(35972370-35972445)
chr4 (220-294)||(38844208-38844282)
chr4 (235-284)||(17135133-17135182)
chr4 (219-284)||(51626345-51626410)
chr4 (242-294)||(13686628-13686680)
chr4 (235-286)||(13948647-13948698)
chr4 (235-291)||(56447177-56447233)
chr4 (223-294)||(22189431-22189502)
chr4 (219-294)||(35334137-35334212)
chr4 (221-291)||(32005187-32005262)
chr4 (240-285)||(51853733-51853778)
chr4 (235-294)||(47023429-47023488)
chr4 (217-271)||(28408537-28408591)
chr4 (235-271)||(3649101-3649137)
chr4 (236-288)||(14042862-14042914)
chr4 (234-294)||(45695862-45695922)
[»] chr2 (23 HSPs)
chr2 (219-294)||(5394424-5394498)
chr2 (226-294)||(44732619-44732687)
chr2 (219-290)||(7157529-7157600)
chr2 (219-294)||(12133269-12133344)
chr2 (219-294)||(42745155-42745230)
chr2 (220-294)||(18105402-18105476)
chr2 (220-285)||(9438176-9438241)
chr2 (221-294)||(31579270-31579343)
chr2 (89-145)||(7157618-7157674)
chr2 (238-294)||(37568785-37568841)
chr2 (219-294)||(993781-993855)
chr2 (238-294)||(17627586-17627642)
chr2 (235-294)||(17672658-17672717)
chr2 (226-289)||(38373038-38373101)
chr2 (217-292)||(38743767-38743842)
chr2 (219-290)||(44752233-44752304)
chr2 (234-283)||(39401123-39401172)
chr2 (235-283)||(17658500-17658548)
chr2 (227-279)||(17981540-17981592)
chr2 (243-283)||(38463993-38464033)
chr2 (34-65)||(13754182-13754213)
chr2 (35-63)||(14288658-14288686)
chr2 (242-294)||(18952294-18952346)
[»] chr8 (18 HSPs)
chr8 (221-294)||(15682956-15683029)
chr8 (219-294)||(19715765-19715840)
chr8 (219-291)||(4125063-4125135)
chr8 (219-294)||(30936031-30936106)
chr8 (220-294)||(13468785-13468859)
chr8 (234-294)||(2743960-2744020)
chr8 (219-294)||(12958124-12958199)
chr8 (219-294)||(30056040-30056115)
chr8 (235-294)||(36994555-36994614)
chr8 (219-270)||(7839292-7839343)
chr8 (220-284)||(28377695-28377759)
chr8 (235-286)||(8878150-8878201)
chr8 (235-294)||(16701434-16701493)
chr8 (235-294)||(44639010-44639069)
chr8 (66-96)||(31760002-31760032)
chr8 (221-294)||(4321545-4321618)
chr8 (34-62)||(8672724-8672752)
chr8 (237-285)||(24988530-24988578)
[»] chr5 (11 HSPs)
chr5 (220-294)||(10591954-10592028)
chr5 (217-294)||(31113361-31113438)
chr5 (219-280)||(5123537-5123598)
chr5 (219-294)||(2798354-2798429)
chr5 (236-294)||(18909357-18909415)
chr5 (219-287)||(2804521-2804589)
chr5 (236-287)||(30785042-30785093)
chr5 (219-287)||(22188037-22188103)
chr5 (236-284)||(12682672-12682720)
chr5 (34-63)||(6754158-6754187)
chr5 (231-291)||(28023494-28023554)
[»] chr6 (12 HSPs)
chr6 (221-294)||(12411175-12411248)
chr6 (227-290)||(21910236-21910299)
chr6 (219-288)||(12836936-12837005)
chr6 (236-294)||(28099270-28099328)
chr6 (219-282)||(31412161-31412224)
chr6 (241-287)||(423689-423735)
chr6 (234-294)||(31107547-31107607)
chr6 (259-294)||(21029062-21029097)
chr6 (95-137)||(13692625-13692667)
chr6 (234-284)||(25084071-25084121)
chr6 (236-294)||(29185320-29185378)
chr6 (34-63)||(12732404-12732433)
[»] chr3 (15 HSPs)
chr3 (185-280)||(20861289-20861387)
chr3 (226-294)||(30996011-30996079)
chr3 (234-294)||(48204365-48204425)
chr3 (228-294)||(27763748-27763814)
chr3 (219-285)||(38088671-38088737)
chr3 (221-285)||(48211001-48211065)
chr3 (186-284)||(55123134-55123235)
chr3 (240-285)||(22755680-22755725)
chr3 (221-294)||(25224726-25224799)
chr3 (219-291)||(38331158-38331230)
chr3 (227-294)||(40294639-40294706)
chr3 (219-287)||(15283106-15283173)
chr3 (220-293)||(11767138-11767211)
chr3 (229-287)||(42514638-42514698)
chr3 (95-131)||(31126481-31126517)
[»] chr1 (20 HSPs)
chr1 (219-294)||(9781028-9781103)
chr1 (219-287)||(22022154-22022222)
chr1 (221-294)||(45806263-45806336)
chr1 (235-291)||(24801411-24801467)
chr1 (235-287)||(32883625-32883677)
chr1 (219-285)||(12035585-12035652)
chr1 (235-285)||(7242862-7242912)
chr1 (221-287)||(39547405-39547471)
chr1 (234-294)||(16756109-16756169)
chr1 (230-294)||(18428191-18428255)
chr1 (219-283)||(36806649-36806713)
chr1 (241-284)||(29124782-29124825)
chr1 (235-287)||(31733746-31733798)
chr1 (235-287)||(40019275-40019327)
chr1 (219-287)||(46864125-46864193)
chr1 (243-294)||(17600561-17600612)
chr1 (235-294)||(25655319-25655378)
chr1 (235-286)||(36982390-36982441)
chr1 (235-284)||(35692522-35692571)
chr1 (35-63)||(8464237-8464265)
[»] scaffold0009 (2 HSPs)
scaffold0009 (186-251)||(27228-27296)
scaffold0009 (246-294)||(32330-32378)
[»] scaffold0189 (1 HSPs)
scaffold0189 (221-294)||(10979-11052)


Alignment Details
Target: scaffold0182 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 26433 - 26358
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  26433 ccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 26358  T

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Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 29059907 - 29059832
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  29059907 ccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 29059832  T

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Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 8839322 - 8839395
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8839322 aaataggcggcagattctccctaagagttttaacgctgctgcatgcccaaggctggattcgaacccaggacctt 8839395  T

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Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 31492203 - 31492130
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  31492203 aaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 31492130  T

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Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 186 - 287
Target Start/End: Complemental strand, 28537524 - 28537424
Alignment:
Q  186 caactgcgaagactaattcctcgagcatcacatccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    |||||||| |||||||| |||| |||||   | |||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  28537524 caactgcggagactaatccctcaagcatgg-acccaaatgggcggcaggctctccctaagagttttaacgttgttgcatgcccaaggctggattcgaacc 28537426  T
Q  286 ca 287  Q
    ||    
T  28537425 ca 28537424  T

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Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 13254142 - 13254215
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||||||    
T  13254142 aaatgggcggcaggctctccctaagagtttcaacgctgctgcatgcctaaggctggattcgaactcaggacctt 13254215  T

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Target: chr7; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 46373775 - 46373704
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccagga 290  Q
    |||||||||||||| |||||||||| |||||||||||||| || ||||||||| ||||||||||||||||||    
T  46373775 ccaaataggcggcaagctctccctacgagttttaacgatgttgtatgcccaagactggattcgaacccagga 46373704  T

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Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 19477288 - 19477363
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| | ||||| |||||||||||||||||||||  || ||||||||||||||||||||| ||||||| |||||    
T  19477288 ccaaatggccggcaagctctccctaagagttttaacactgttgcatgcccaaggctggattcaaacccagaacctt 19477363  T

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Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 294
Target Start/End: Original strand, 2657887 - 2657950
Alignment:
Q  231 caggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||| |||||||||||||| ||||||||||||||||||| ||| |||| |||| ||||    
T  2657887 caggctctccttaagagttttaacgttgctgcatgcccaaggctgtatttgaactcagggcctt 2657950  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 21747079 - 21747153
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| || || |||||||||||||||||||||||| ||| ||||||| || |||||||||| ||||||||||||    
T  21747079 ccaaatgggtggtaggctctccctaagagttttaacgctgcagcatgcctaaagctggattcg-acccaggacctt 21747153  T

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Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 24172313 - 24172236
Alignment:
Q  217 atccaaataggcggcaggctctccctaagag--ttttaacgatgctgcatgcccaaggctggattcgaacccaggacc 292  Q
    |||||| | ||||||| |||||| |||||||  |||||||| || ||||||||||||| |||||||||||||||||||    
T  24172313 atccaagtgggcggcaagctctcactaagagagttttaacgttgttgcatgcccaaggttggattcgaacccaggacc 24172236  T

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Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 27484103 - 27484163
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||||  ||| |||||||||    
T  27484103 gctctccccaagagttttaacgctgctgcatgcccatggctggatttaaactcaggacctt 27484163  T

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Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 283
Target Start/End: Original strand, 40099312 - 40099375
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaa 283  Q
    ||||| ||||||| |||||||||||||||||||| | ||||||||  |||| ||||||||||||    
T  40099312 caaatgggcggcaagctctccctaagagttttaatgctgctgcatatccaaagctggattcgaa 40099375  T

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Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 40212039 - 40211980
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||||||||||| || |||||||||||| ||||||| ||||||| ||||||    
T  40212039 ctcttcctaagagttttaacgttgttgcatgcccaagactggatttgaacccatgacctt 40211980  T

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Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 4059748 - 4059797
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    ||||| |||||||||||||||||| ||||||| |||||||| ||||||||    
T  4059748 ctctctctaagagttttaacgatgttgcatgctcaaggctgtattcgaac 4059797  T

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Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 287
Target Start/End: Complemental strand, 20207649 - 20207531
Alignment:
Q  172 gtatcatctgtgtacaactgcgaagactaattcctcgagcatcaca---tccaaataggcggcaggctctccctaagagttttaacgatgctgcatgccc 268  Q
    ||||| ||||||  |||||||| |||||||| ||||||||||   |   |||||||  |||||| ||||||| |||||||||||||| || | ||||||     
T  20207649 gtatcctctgtgcgcaactgcggagactaatccctcgagcattgtaggatccaaatgcgcggcaagctctccttaagagttttaacgttgttacatgcct 20207550  T
Q  269 aaggctggattcgaaccca 287  Q
    ||||||| ||| |||||||    
T  20207549 aaggctgaattagaaccca 20207531  T

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Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 12142707 - 12142656
Alignment:
Q  240 cctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    |||||||||||||||||||||||||||||| | | | ||||||||| |||||    
T  12142707 cctaagagttttaacgatgctgcatgcccatgaccgaattcgaaccaaggac 12142656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 264
Target Start/End: Complemental strand, 14545045 - 14545000
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcat 264  Q
    |||||| | |||||||||||||||||||||||||||  ||||||||    
T  14545045 ccaaatggacggcaggctctccctaagagttttaacactgctgcat 14545000  T

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Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 23933692 - 23933765
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||  |||||||||| |||||||| | |  |||| || |||| ||||||||||||||||||||||    
T  23933692 aaatgggcggcaaactctccctaaaagttttaatgctcttgcaagctcaagactggattcgaacccaggacctt 23933765  T

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Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Original strand, 31717920 - 31717969
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    |||| |||||||||||||||| ||||||||| | |||| |||||||||||    
T  31717920 ctcttcctaagagttttaacgttgctgcatgtctaaggttggattcgaac 31717969  T

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Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 7265368 - 7265420
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||||||||||||||||   |||||||||||||| || ||| ||||||||    
T  7265368 ctctccctaagagttttaacatcgctgcatgcccaagactagatccgaaccca 7265420  T

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Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 11486783 - 11486843
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggatt 279  Q
    |||||| ||||||| ||||| | |||||||||||||   | ||||||||||||||||||||    
T  11486783 ccaaatgggcggcaagctcttcttaagagttttaacacagatgcatgcccaaggctggatt 11486843  T

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Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 65
Target Start/End: Original strand, 42841850 - 42841882
Alignment:
Q  33 tttactacttccgttcctttttaattgtcactt 65  Q
    |||||||| ||||||||||||||||||||||||    
T  42841850 tttactacatccgttcctttttaattgtcactt 42841882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 5e-28; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 14854707 - 14854632
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14854707 ccaaatgggcggcaagctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccagaacctt 14854632  T

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Target: chr4; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 31307105 - 31307180
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  31307105 ccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 31307180  T

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Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 219 - 293
Target Start/End: Complemental strand, 46016251 - 46016177
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacct 293  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  46016251 ccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacct 46016177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 186 - 294
Target Start/End: Complemental strand, 38766227 - 38766116
Alignment:
Q  186 caactgcgaagactaattcctcgagcatc---acatccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcga 282  Q
    |||||||| |||||||| ||||||||||    | | |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |    
T  38766227 caactgcggagactaatccctcgagcattgtgagacccaaatgggcggcagactctccctaagagttttaacgctgctgcatgcccaaggctggattcaa 38766128  T
Q  283 acccaggacctt 294  Q
    ||||||||||||    
T  38766127 acccaggacctt 38766116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 45994624 - 45994549
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||| ||||||||||||||||||||||||| || |||||||||||||||||||||||| ||||||||||    
T  45994624 ccaaatgggcgtcaggctctccctaagagttttaacgttgttgcatgcccaaggctggattcgaatccaggacctt 45994549  T

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Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 293
Target Start/End: Original strand, 46250594 - 46250668
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacct 293  Q
    |||||| ||||||||||| ||| |||||||||||||  ||||||||||||||| ||||||||||||| |||||||    
T  46250594 ccaaatgggcggcaggctttccataagagttttaacactgctgcatgcccaagactggattcgaacctaggacct 46250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 9012365 - 9012300
Alignment:
Q  226 ggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    ||||||| ||||||||||||||||| |||  |||||||||||||||||| ||||||||||||||||    
T  9012365 ggcggcaagctctccctaagagtttgaacactgctgcatgcccaaggctagattcgaacccaggac 9012300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 11140540 - 11140484
Alignment:
Q  238 tccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||    
T  11140540 tccctaagagttttaaagctgctgcatgcccaaggctggattcgaaaccaggacctt 11140484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 35972445 - 35972370
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||||  |||||||||| |||||||||| ||||| ||||||| ||||||||||||||||| ||||||    
T  35972445 ccaaatgggcggcaaactctccctaatagttttaacgctgctgtatgcccatggctggattcgaacccaagacctt 35972370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 38844208 - 38844282
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||| |||||||| |||| |||||||||||||||| || ||||||||||| ||||||||||||| || ||||||    
T  38844208 caaatgggcggcagactcttcctaagagttttaacgctgttgcatgcccaaagctggattcgaactcatgacctt 38844282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 17135182 - 17135133
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  17135182 ctctccctaagagttttaacgctgctgcatgcacaaggctggattcgaac 17135133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 51626345 - 51626410
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    |||||| | |||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  51626345 ccaaatggacggcagactctccctaaaagttttaacactgctgcatgcccaaggctggattcgaac 51626410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 13686680 - 13686628
Alignment:
Q  242 taagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  13686680 taagagttttaacgctgctgcacgcccaaggatggattcgaacccaggacctt 13686628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 13948647 - 13948698
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccc 286  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||||||    
T  13948647 ctctccctaagagttttaacactgctgcatacccaaggctggattcgaaccc 13948698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 56447177 - 56447233
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    ||||||||||||||||||||  |||||||||||||  |||||||||||||| |||||    
T  56447177 ctctccctaagagttttaacactgctgcatgcccatagctggattcgaacctaggac 56447233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 223 - 294
Target Start/End: Original strand, 22189431 - 22189502
Alignment:
Q  223 ataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||||  |||| |||||||||||||| | |||||||||| ||||| ||||||||||| | |||||||    
T  22189431 ataggcggcaatctctacctaagagttttaatgttgctgcatgcacaaggttggattcgaactctggacctt 22189502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 35334137 - 35334212
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||| | ||||| ||||||||||||||  ||||||||||||||||||| || |||||| || |||||    
T  35334137 ccaaatgggcggcggactctctctaagagttttaactctgctgcatgcccaaggctgaatacgaaccaagaacctt 35334212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Original strand, 32005187 - 32005262
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaac---gatgc--tgcatgcccaaggctggattcgaacccaggac 291  Q
    ||||||||||||| ||||||||||||||||||||   |||||  ||||||||||| |||| |||||||| ||||||    
T  32005187 aaataggcggcagactctccctaagagttttaacactgatgcaatgcatgcccaaagctgaattcgaactcaggac 32005262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 51853778 - 51853733
Alignment:
Q  240 cctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    |||||||||||||| || |||||||||||||||||| |||||||||    
T  51853778 cctaagagttttaaggaagctgcatgcccaaggctgaattcgaacc 51853733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 47023488 - 47023429
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||||||||||||||  || |||||||| ||| ||||||| ||||| ||||||||    
T  47023488 ctctccctaagagttttaactttgttgcatgcctaagtctggattggaaccaaggacctt 47023429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 28408591 - 28408537
Alignment:
Q  217 atccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaag 271  Q
    |||||||| |||||||  |||||| ||||| |||||||||||||||| |||||||    
T  28408591 atccaaatgggcggcaaactctccataagaattttaacgatgctgcacgcccaag 28408537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 235 - 271
Target Start/End: Original strand, 3649101 - 3649137
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaag 271  Q
    ||||||||||||||||||||| || ||||||||||||    
T  3649101 ctctccctaagagttttaacgttgttgcatgcccaag 3649137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 288
Target Start/End: Complemental strand, 14042914 - 14042862
Alignment:
Q  236 tctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccag 288  Q
    |||||| |||||||| ||||  |||||||||||||| || |||||||||||||    
T  14042914 tctccccaagagtttaaacgcggctgcatgcccaagacttgattcgaacccag 14042862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 45695862 - 45695922
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||| ||| | |||||||| |||| ||||| ||||| ||||||| |||||||||||||    
T  45695862 gctctccttaaaaattttaacgctgctacatgctcaaggttggattcaaacccaggacctt 45695922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 5e-28; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 5394498 - 5394424
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5394498 ccaaatgggcggcaggctctccctaagagttttaac-atgctgcatgcccaaggctggattcgaacccaggacctt 5394424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 226 - 294
Target Start/End: Original strand, 44732619 - 44732687
Alignment:
Q  226 ggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  44732619 ggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 44732687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 7157600 - 7157529
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccagga 290  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||    
T  7157600 ccaaataggcggcaggctctccctaagagttttaacgttgctgcatgcccaaggctagattcgaacctagga 7157529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 12133269 - 12133344
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| | |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  12133269 ccaaatggacggcaggctctccctaagagttttaacgttgctgcatgtccaaggctggattcgaacccatgacctt 12133344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 42745155 - 42745230
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||| |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||    
T  42745155 ccaaataggcagcagactctccctaagagttttaacattgctgcatgcccaaggctggattcgaacccaagacctt 42745230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 18105402 - 18105476
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||| ||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||||    
T  18105402 caaatgggcggcaggctctccataagaattttaacgttgttgcatgcccaaggctggattcgaacccaggacctt 18105476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 285
Target Start/End: Original strand, 9438176 - 9438241
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    ||||| ||||||||| ||| |||||||||||||||  |||||||||||||||||||||||||||||    
T  9438176 caaatgggcggcaggttcttcctaagagttttaaccctgctgcatgcccaaggctggattcgaacc 9438241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 31579270 - 31579343
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||| |||||||||| |||||||||  || |||||||||||||||||||||||||||| ||||||    
T  31579270 aaatgggcggcagactctccctaaaagttttaacactgttgcatgcccaaggctggattcgaacccaagacctt 31579343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 7157674 - 7157618
Alignment:
Q  89 atttgctaaaaaatagcagataattgataagttagattatagcagatgaatttataa 145  Q
    ||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||    
T  7157674 atttgctaaaaaataacagatagttgataagttagattatagcggatgaatttataa 7157618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 294
Target Start/End: Original strand, 37568785 - 37568841
Alignment:
Q  238 tccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  37568785 tccctaagagttttaacactgctgcatgcctaaggctggattcgaacccaggacctt 37568841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 993855 - 993781
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||||||| | ||||||||||||||||| || |||||||||||||||| || ||||||||||||||||||    
T  993855 ccaaatgggcggcaagttctccctaagagtttta-cgctgctgcatgcccaaggttgaattcgaacccaggacctt 993781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 17627642 - 17627586
Alignment:
Q  238 tccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||| |||||||| || ||||||||||||||||||||||||| |||||||||    
T  17627642 tccctaagaattttaacgttgttgcatgcccaaggctggattcgaactcaggacctt 17627586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 17672717 - 17672658
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||| |||||||| || ||||||||||||| ||||||||||| |||||||||    
T  17672717 ctctccctaagaattttaacgttgttgcatgcccaaggttggattcgaactcaggacctt 17672658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 226 - 289
Target Start/End: Original strand, 38373038 - 38373101
Alignment:
Q  226 ggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccagg 289  Q
    ||||||| ||||| ||||||||||||| || ||||||||||  |||| ||||||||||||||||    
T  38373038 ggcggcaagctcttcctaagagttttaccgctgctgcatgcataaggttggattcgaacccagg 38373101  T

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Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 38743842 - 38743767
Alignment:
Q  217 atccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacc 292  Q
    ||||||||  |||||| |||||||| || |||||||||| ||||||||||||||| || ||||| ||| |||||||    
T  38743842 atccaaatgagcggcaagctctccccaaaagttttaacgttgctgcatgcccaagactagattcaaactcaggacc 38743767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 290
Target Start/End: Original strand, 44752233 - 44752304
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccagga 290  Q
    |||||| || |||| |||||||| ||||||||||||| || |||||||||||| || |||||||||| ||||    
T  44752233 ccaaattggtggcaagctctcccaaagagttttaacgttgttgcatgcccaagacttgattcgaacctagga 44752304  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 283
Target Start/End: Original strand, 39401123 - 39401172
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaa 283  Q
    ||||||||||| |||||||| ||| ||||||||||||||||| |||||||    
T  39401123 gctctccctaaaagttttaatgatactgcatgcccaaggctgaattcgaa 39401172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 283
Target Start/End: Complemental strand, 17658548 - 17658500
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaa 283  Q
    |||||||||||| |||||||| || ||||||||||||||| ||||||||    
T  17658548 ctctccctaagaattttaacgttgttgcatgcccaaggctagattcgaa 17658500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 279
Target Start/End: Complemental strand, 17981592 - 17981540
Alignment:
Q  227 gcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggatt 279  Q
    |||||| |||||||||||||||||||| | || |||||||||||| |||||||    
T  17981592 gcggcaagctctccctaagagttttaatgttgttgcatgcccaagactggatt 17981540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 38464033 - 38463993
Alignment:
Q  243 aagagttttaacgatgctgcatgcccaaggctggattcgaa 283  Q
    ||||||||||||| || ||||||||||||||||||||||||    
T  38464033 aagagttttaacggtgttgcatgcccaaggctggattcgaa 38463993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 65
Target Start/End: Complemental strand, 13754213 - 13754182
Alignment:
Q  34 ttactacttccgttcctttttaattgtcactt 65  Q
    ||||||||||||||||||||||||||||||||    
T  13754213 ttactacttccgttcctttttaattgtcactt 13754182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Complemental strand, 14288686 - 14288658
Alignment:
Q  35 tactacttccgttcctttttaattgtcac 63  Q
    |||||||||||||||||||||||||||||    
T  14288686 tactacttccgttcctttttaattgtcac 14288658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 294
Target Start/End: Complemental strand, 18952346 - 18952294
Alignment:
Q  242 taagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||| | ||||||||||| || | ||||||||||| |||||||||    
T  18952346 taagagttttaatgttgctgcatgcctaaagttggattcgaactcaggacctt 18952294  T

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Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 15683029 - 15682956
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  15683029 aaatgggcggcaggctctccctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggacctt 15682956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 19715765 - 19715840
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19715765 ccaaatgggcggcaagctctccctgagagttttaacgctgctgcatgcccaaggctggattcgaacccaggacctt 19715840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 4125063 - 4125135
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||    
T  4125063 ccaaatgggcggcaggctctccctaagagttttaacagtgctgcatgcccaaggcttgattcgaacccaggac 4125135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 30936106 - 30936031
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||  |||||||||||||||| |||||||||    
T  30936106 ccaaatgggcggcaggctctccctaagagttttaacgttgctgcatgcttaaggctggattcgaactcaggacctt 30936031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 13468785 - 13468859
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||| |||||||| ||||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  13468785 caaatgggcggcagactctctctaagagttttaacgctgctacatgcccaaggctggattcgaacccaggacctt 13468859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 2744020 - 2743960
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  2744020 gctctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 2743960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 12958124 - 12958199
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| ||||||    
T  12958124 ccaaatgggcgacaggctctccctaagagttttaacgctgctgcatgcccaatgctggattcaaacccatgacctt 12958199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 30056040 - 30056115
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| | |||||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||| ||||||    
T  30056040 ccaaatggacggcaggctctccctaagagttttaatgctgctgcatgcctaaggctggatttgaacccatgacctt 30056115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 36994555 - 36994614
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  36994555 ctctccttaagagttttaacgctgctgcatgtccaaggctggattcgaacccaggacctt 36994614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 7839292 - 7839343
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaa 270  Q
    |||||| ||||||| |||||||||||||||||||| | ||||||||||||||    
T  7839292 ccaaatgggcggcatgctctccctaagagttttaaagctgctgcatgcccaa 7839343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 220 - 284
Target Start/End: Complemental strand, 28377759 - 28377695
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    ||||||| |||||  |||||||||||| |||||| | ||||||||||| || |||||||||||||    
T  28377759 caaatagacggcaaactctccctaagaattttaatgttgctgcatgcctaatgctggattcgaac 28377695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 286
Target Start/End: Original strand, 8878150 - 8878201
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccc 286  Q
    |||| |||||||||||||||| || |||||||| || |||||||||||||||    
T  8878150 ctcttcctaagagttttaacgttgttgcatgcctaaagctggattcgaaccc 8878201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 16701434 - 16701493
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||||||| ||||| | | ||| ||| |||||||||||||||||||||| |||||    
T  16701434 ctctccctaagaggtttaaagctactgtatgtccaaggctggattcgaacccagaacctt 16701493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 294
Target Start/End: Complemental strand, 44639069 - 44639010
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||||||||||||||| || ||||||| ||||| ||||||| ||  |||||||||    
T  44639069 ctctccctaagagttttaacgttgttgcatgctcaaggttggattcaaattcaggacctt 44639010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 96
Target Start/End: Complemental strand, 31760032 - 31760002
Alignment:
Q  66 aattaaaaaggaacggagggagtatttgcta 96  Q
    |||||||||||||||||||||||||||||||    
T  31760032 aattaaaaaggaacggagggagtatttgcta 31760002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 4321545 - 4321618
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| || || |||||||||||||||||||||| |  |||||| | ||| |||||||| ||||||| |||||    
T  4321545 aaatagacgacaagctctccctaagagttttaacgttattgcatgtctaagactggattcaaacccagaacctt 4321618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 62
Target Start/End: Complemental strand, 8672752 - 8672724
Alignment:
Q  34 ttactacttccgttcctttttaattgtca 62  Q
    |||||||||||||||||||||||||||||    
T  8672752 ttactacttccgttcctttttaattgtca 8672724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 237 - 285
Target Start/End: Complemental strand, 24988578 - 24988530
Alignment:
Q  237 ctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    ||||| |||||||||| |  |||||||||||||||||||||||| ||||    
T  24988578 ctccccaagagttttagcactgctgcatgcccaaggctggattcaaacc 24988530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 5e-25; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 294
Target Start/End: Complemental strand, 10592028 - 10591954
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||| |||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  10592028 caaatgggcggcagactctccctaagagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 10591954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 294
Target Start/End: Complemental strand, 31113438 - 31113361
Alignment:
Q  217 atccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||| ||||||||| || |||||    
T  31113438 atccaaatgggcggtaggctctccctaagagttttaacactgctgcatgcccaaggctgaattcgaacctagaacctt 31113361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 280
Target Start/End: Original strand, 5123537 - 5123598
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattc 280  Q
    |||||| |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||    
T  5123537 ccaaatgggcggcaggctctccctaagagttttaacactgctgcatgcccaaggctgaattc 5123598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 2798354 - 2798429
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||||| | ||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||| |||||    
T  2798354 ccaaatgggcggtaagctctccctaaaagttttaacgctgctgcatgctcaaggttggattcgaacccagaacctt 2798429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 294
Target Start/End: Original strand, 18909357 - 18909415
Alignment:
Q  236 tctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||||||  |||||||| |||||||||||||||||||| ||||||||    
T  18909357 tctccctaagagttttaacactgctgcatacccaaggctggattcgaacctaggacctt 18909415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 2804521 - 2804589
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    |||||| ||||| | ||||||||||| |||||||||| |||||||||| ||||| ||||||||||||||    
T  2804521 ccaaatgggcggtaagctctccctaaaagttttaacgctgctgcatgctcaaggttggattcgaaccca 2804589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 236 - 287
Target Start/End: Original strand, 30785042 - 30785093
Alignment:
Q  236 tctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    |||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  30785042 tctccctaagagttttaacgttgctgcatgtccaaagctggattcgaaccca 30785093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 22188037 - 22188103
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||||||||||| ||||||  ||||||||||||| || || |||||||||||||||||| ||||||    
T  22188037 ccaaataggcggcagactctcc--aagagttttaacgctgttgtatgcccaaggctggattcaaaccca 22188103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 236 - 284
Target Start/End: Complemental strand, 12682720 - 12682672
Alignment:
Q  236 tctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    |||||| ||||||||||||| || ||||||| |||||||||||||||||    
T  12682720 tctcccgaagagttttaacgttgttgcatgctcaaggctggattcgaac 12682672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 63
Target Start/End: Original strand, 6754158 - 6754187
Alignment:
Q  34 ttactacttccgttcctttttaattgtcac 63  Q
    ||||||||||||||||||||||||||||||    
T  6754158 ttactacttccgttcctttttaattgtcac 6754187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 231 - 291
Target Start/End: Original strand, 28023494 - 28023554
Alignment:
Q  231 caggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    |||||||||||||| |||||||||  | ||  ||||| |||||||||||||||| ||||||    
T  28023494 caggctctccctaaaagttttaacactactatatgcctaaggctggattcgaactcaggac 28023554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 12411248 - 12411175
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  12411248 aaatgggcggcagactcttcctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaggacctt 12411175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 227 - 290
Target Start/End: Complemental strand, 21910299 - 21910236
Alignment:
Q  227 gcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccagga 290  Q
    ||||||| ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||    
T  21910299 gcggcagactctctctaagagttttaacgatgttgcatgcccaaggctggattcgaacccagga 21910236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 12836936 - 12837005
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccag 288  Q
    |||||| ||||||  |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  12836936 ccaaatgggcggcgagctctccctaagagttttaacgctgctgcatgcctaaggctggattcgaacccag 12837005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 28099328 - 28099270
Alignment:
Q  236 tctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28099328 tctccctaaaagttttaacactgctgcatgcccaaggctggattcgaacccaggacctt 28099270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 282
Target Start/End: Complemental strand, 31412224 - 31412161
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcga 282  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||| |||||| |||| ||||||    
T  31412224 ccaaatgggcggcagactctccctaagagttttaacactgctgcacgcccaaagctgaattcga 31412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 287
Target Start/End: Complemental strand, 423735 - 423689
Alignment:
Q  241 ctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||||    
T  423735 ctaagagttttaacgctgcagcatgcccaaggctggattcaaaccca 423689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 31107547 - 31107607
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||| ||||||||||||| || |||||| |||| ||||||||||||| ||| |||||    
T  31107547 gctctcccaaagagttttaacgctgttgcatgtccaatgctggattcgaactcagaacctt 31107607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 259 - 294
Target Start/End: Original strand, 21029062 - 21029097
Alignment:
Q  259 ctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21029062 ctgcatgcccaaggctggattcgaacccaagacctt 21029097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 13692667 - 13692625
Alignment:
Q  95 taaaaaatagcagataattgataagttagattatagcagatga 137  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||    
T  13692667 taaaaaatagcggataattgataagttagtttatagcggatga 13692625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 25084121 - 25084071
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    |||||||||||||||||||||  ||||||||| ||||| ||| ||||||||    
T  25084121 gctctccctaagagttttaacattgctgcatgtccaagactgaattcgaac 25084071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 294
Target Start/End: Complemental strand, 29185378 - 29185320
Alignment:
Q  236 tctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||||||| || |||||| | || |||||||||||||| || |||||    
T  29185378 tctccctaagagttttaacgttgatgcatgtctaatgctggattcgaacctagaacctt 29185320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 63
Target Start/End: Complemental strand, 12732433 - 12732404
Alignment:
Q  34 ttactacttccgttcctttttaattgtcac 63  Q
    ||||||||||||||||||||||||||||||    
T  12732433 ttactacttccgttcctttttaattgtcac 12732404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 53; Significance: 2e-21; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 185 - 280
Target Start/End: Complemental strand, 20861387 - 20861289
Alignment:
Q  185 acaactgcgaagactaattcctcgagcatcac---atccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattc 280  Q
    ||||||||| |||||||| |||||||||| |    | |||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||||    
T  20861387 acaactgcggagactaatccctcgagcattatggaacccaaatgggcggcaggctctccctaagagttttaacgctgctgcatgcccaatgctggattc 20861289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 226 - 294
Target Start/End: Original strand, 30996011 - 30996079
Alignment:
Q  226 ggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||| ||||||||||||||||||||| || |||||||||||||  ||||||||||||||||||||    
T  30996011 ggcggcagactctccctaagagttttaacgctgttgcatgcccaaggtcggattcgaacccaggacctt 30996079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 48204365 - 48204425
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  48204365 gctctccctaagggttttaacgttgctgcatgcccaaggctggattcgaacccaagacctt 48204425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 228 - 294
Target Start/End: Complemental strand, 27763814 - 27763748
Alignment:
Q  228 cggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||||||||||||||||||||  || || ||||||||||||||||||||||||||||||||    
T  27763814 cggcagactctccctaagagttttaacactgttgtatgcccaaggctggattcgaacccaggacctt 27763748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 38088737 - 38088671
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    |||||||||||||| | |||||||||||||||||||| | |||||||||||| ||||||||||||||    
T  38088737 ccaaataggcggcaagttctccctaagagttttaacgctactgcatgcccaaagctggattcgaacc 38088671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 221 - 285
Target Start/End: Original strand, 48211001 - 48211065
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    |||||| ||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||||||    
T  48211001 aaatagacggcaagctctccataagagttttaacgttgctgcatgctcaaggctggattcgaacc 48211065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 186 - 284
Target Start/End: Complemental strand, 55123235 - 55123134
Alignment:
Q  186 caactgcgaagactaattcctcgagcatc---acatccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcga 282  Q
    ||||||||||||||||| ||||||||||    | | |||||| ||  ||| ||||||||||||| |||||||| ||||||||  ||||||||||||||||    
T  55123235 caactgcgaagactaatccctcgagcattgtgagacccaaatgggtagcaagctctccctaagaattttaacgctgctgcatttccaaggctggattcga 55123136  T
Q  283 ac 284  Q
    ||    
T  55123135 ac 55123134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 285
Target Start/End: Complemental strand, 22755725 - 22755680
Alignment:
Q  240 cctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    |||||||||||||| | |||||||||||||||||||||||||||||    
T  22755725 cctaagagttttaatgctgctgcatgcccaaggctggattcgaacc 22755680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 25224799 - 25224726
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| ||||||| | ||||| |||||||||||||| |||||||| |||||  || |||||||||||||||||||    
T  25224799 aaatgggcggcaagttctccttaagagttttaacgctgctgcattcccaaaacttgattcgaacccaggacctt 25224726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 38331230 - 38331158
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||| ||| | ||||||| ||| ||||||    
T  38331230 ccaaatgggcggcaagctctctctaagagttttaacgctgctgcatgctcaaagttggattcaaactcaggac 38331158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 294
Target Start/End: Complemental strand, 40294706 - 40294639
Alignment:
Q  227 gcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| ||| |||||||||||||||||  || |||||  |||||||||||||||||| |||||||||    
T  40294706 gcggcaagctttccctaagagttttaacattgttgcatatccaaggctggattcgaactcaggacctt 40294639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 15283173 - 15283106
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    |||||| |||||||  || ||| |||||||||||| ||||||||||||||| | |||||||||||||||    
T  15283173 ccaaatgggcggcaatctttccataagagttttaa-gatgctgcatgcccatgactggattcgaaccca 15283106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 293
Target Start/End: Complemental strand, 11767211 - 11767138
Alignment:
Q  220 caaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacct 293  Q
    ||||| ||||||| || ||  |||||||||||||   || ||||||||||||| | ||||||||||||||||||    
T  11767211 caaatgggcggcaagcacttgctaagagttttaatattgttgcatgcccaaggatagattcgaacccaggacct 11767138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 42514698 - 42514638
Alignment:
Q  229 ggcaggctctccctaagagttttaa--cgatgctgcatgcccaaggctggattcgaaccca 287  Q
    |||| ||||||||||||||||||||  || || ||||||||||| | ||||||||||||||    
T  42514698 ggcaagctctccctaagagttttaacgcgctgatgcatgcccaaagttggattcgaaccca 42514638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 95 - 131
Target Start/End: Complemental strand, 31126517 - 31126481
Alignment:
Q  95 taaaaaatagcagataattgataagttagattatagc 131  Q
    |||||||||||| |||||||||||||||| |||||||    
T  31126517 taaaaaatagcaaataattgataagttagcttatagc 31126481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 9781028 - 9781103
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||| |||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||||||    
T  9781028 ccaaatgggcggccgactctccctaagagttttaacgctgctgcatgcccaaggctggattcgaactcaagacctt 9781103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 22022222 - 22022154
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    |||||| || |||| | |||||||||||||||||| | |||||||||||||||||||||||||||||||    
T  22022222 ccaaatgggtggcaagttctccctaagagttttaatgctgctgcatgcccaaggctggattcgaaccca 22022154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 45806336 - 45806263
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||| | ||||||||||||||||||||   ||||||||||||||| ||| |||||||| |||||||||    
T  45806336 aaataggcggtatgctctccctaagagttttaaaactgctgcatgcccaagactgaattcgaactcaggacctt 45806263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 291
Target Start/End: Complemental strand, 24801467 - 24801411
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggac 291  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||||||||| |||||    
T  24801467 ctctccctaagagttttaacagtgctgcatgcctaaggctggattcgaaccaaggac 24801411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 32883625 - 32883677
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  32883625 ctctccctaagagttttaacgctgctgcatgtccaatgctggattcgaaccca 32883677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 285
Target Start/End: Complemental strand, 12035652 - 12035585
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagtttt-aacgatgctgcatgcccaaggctggattcgaacc 285  Q
    |||||| |||||||| ||||||||||||||||| ||| ||| |||||||| |||||||||||||||||    
T  12035652 ccaaatgggcggcagactctccctaagagtttttaacaatgttgcatgccaaaggctggattcgaacc 12035585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 235 - 285
Target Start/End: Original strand, 7242862 - 7242912
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacc 285  Q
    ||||||||||||||||||||| ||||||||| ||||| |||||||||||||    
T  7242862 ctctccctaagagttttaacgttgctgcatgtccaagactggattcgaacc 7242912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 39547405 - 39547471
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||||||||| ||| ||||||||||||| ||  |||||||||| |||| |||||||||||||||    
T  39547405 aaataggcggcagactccccctaagagttttgacactgctgcatgctcaagactggattcgaaccca 39547471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 16756169 - 16756109
Alignment:
Q  234 gctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||||||||| | |||||||||||| |||| |||| ||||||| |||||    
T  16756169 gctctccctaagagttttaacgcttctgcatgcccaatgctgaattcaaacccagaacctt 16756109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 230 - 294
Target Start/End: Original strand, 18428191 - 18428255
Alignment:
Q  230 gcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||||| |||||||||  |||||||||||||||| |||||||||| |||| |||||    
T  18428191 gcagactctccctaaaagttttaacactgctgcatgcccaaggttggattcgaatccagaacctt 18428255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 36806713 - 36806649
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaa 283  Q
    |||||| |||||||| | ||||||||||||||||||| | ||| ||||||||||||| |||||||    
T  36806713 ccaaatgggcggcagacactccctaagagttttaacgctactgtatgcccaaggctgaattcgaa 36806649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 29124825 - 29124782
Alignment:
Q  241 ctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    ||||||||||||||| |||||||||||||| |||||||||||||    
T  29124825 ctaagagttttaacgctgctgcatgcccaatgctggattcgaac 29124782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Original strand, 31733746 - 31733798
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||||||||||||||||  ||||||||||| || |||| |||||||||||    
T  31733746 ctctccctaagagttttaactctgctgcatgcctaatgctgaattcgaaccca 31733798  T

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Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 287
Target Start/End: Complemental strand, 40019327 - 40019275
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    ||||||| ||||||||||||| ||||||||  ||||||||| |||||||||||    
T  40019327 ctctccccaagagttttaacgttgctgcatatccaaggctgaattcgaaccca 40019275  T

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Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 46864193 - 46864125
Alignment:
Q  219 ccaaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccca 287  Q
    |||||| | ||||| | ||||||||||| |||||||| | |||||||||||| |||||||| |||||||    
T  46864193 ccaaatggacggcaagttctccctaagaattttaacgctactgcatgcccaaagctggatttgaaccca 46864125  T

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Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 243 - 294
Target Start/End: Original strand, 17600561 - 17600612
Alignment:
Q  243 aagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||||||||| ||||||| |||||||| |||| |||||| ||||||    
T  17600561 aagagttttaacgatgttgcatgctcaaggctgaattctaacccaagacctt 17600612  T

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Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 294
Target Start/End: Original strand, 25655319 - 25655378
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    ||||| ||||||||||||||| |||||||||||||| | |  |||||||||||| |||||    
T  25655319 ctctctctaagagttttaacgttgctgcatgcccaatgttaaattcgaacccagaacctt 25655378  T

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Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 286
Target Start/End: Complemental strand, 36982441 - 36982390
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaaccc 286  Q
    ||||||||||||||||||||| || |||||| | ||||||| ||||||||||    
T  36982441 ctctccctaagagttttaacgttgttgcatgtctaaggctgaattcgaaccc 36982390  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 284
Target Start/End: Complemental strand, 35692571 - 35692522
Alignment:
Q  235 ctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaac 284  Q
    |||||||||||||||||||||  | ||||||||||| | |||||||||||    
T  35692571 ctctccctaagagttttaacgtcgttgcatgcccaatgttggattcgaac 35692522  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 35 - 63
Target Start/End: Original strand, 8464237 - 8464265
Alignment:
Q  35 tactacttccgttcctttttaattgtcac 63  Q
    |||||||||||||||||||||||||||||    
T  8464237 tactacttccgttcctttttaattgtcac 8464265  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 251
Target Start/End: Original strand, 27228 - 27296
Alignment:
Q  186 caactgcgaagactaattcctcgagcatc---acatccaaataggcggcaggctctccctaagagtttt 251  Q
    ||||||||||||||||| |||||||||||   | |||||||| ||||||| ||||||||||||||||||    
T  27228 caactgcgaagactaatccctcgagcatcgtgagatccaaatgggcggcaagctctccctaagagtttt 27296  T

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Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 294
Target Start/End: Original strand, 32330 - 32378
Alignment:
Q  246 agttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||||||||| |||||||| ||||||  ||||||||||||||| |||||    
T  32330 agttttaacgctgctgcatacccaagattggattcgaacccagaacctt 32378  T

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Target: scaffold0189 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 11052 - 10979
Alignment:
Q  221 aaataggcggcaggctctccctaagagttttaacgatgctgcatgcccaaggctggattcgaacccaggacctt 294  Q
    |||| |||||||  |||||| |||||||||||||  || |||||||||||   |||||||||||| ||||||||    
T  11052 aaatgggcggcaaactctccgtaagagttttaacattgttgcatgcccaaaaatggattcgaacctaggacctt 10979  T

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