View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3572_low_23 (Length: 240)
Name: NF3572_low_23
Description: NF3572
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3572_low_23 |
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Alignment Details
Target: chr7 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Complemental strand, 46894485 - 46894252
Alignment:
| Q |
1 |
caagcaccctattgccattcaacccaatgctccagagccaatgctcacacgtgtcacacgtgtgtctcttctttcagacccggttgccataacaacacct |
100 |
Q |
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| T |
46894485 |
caagcaccctattgccattcaacccaatgctccagagccaatgctcacacatgtcacacgtgtgtctcttctttcagacccggttgccataacaacacct |
46894386 |
T |
|
| Q |
101 |
gtgggcttatgtccgcaaacccggtcactcaacaaacagctatgggtgaactggctcaagatgtcctcgctatctacgccattaacgggcctaagcccgg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
46894385 |
gtgggcttatgtccgcaaacccggtcactcaacaaacagctatgggtgaactggctcaagatgtcctcgctatctacgccattaatgggcctaagcccgg |
46894286 |
T |
|
| Q |
201 |
cccaatggttacaatccctcggttcctcttctct |
234 |
Q |
| |
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|||||||||||||||||||| ||||||||||||| |
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| T |
46894285 |
cccaatggttacaatccctcagttcctcttctct |
46894252 |
T |
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