View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3576_low_32 (Length: 309)
Name: NF3576_low_32
Description: NF3576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3576_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 15 - 293
Target Start/End: Complemental strand, 27429406 - 27429120
Alignment:
| Q |
15 |
ggtgtctgtattaatgtggtgaggttttcaggttttgttgttttggggtgagtgggaatgtggggtttagtgcaataagcaaaaagttgatggagatagt |
114 |
Q |
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| T |
27429406 |
ggtgtctgtattaatgtggtgaggttttcaggttttgttgttttggggtgagtgggaatgtggggtttagtccaataagcaaaaagttgatggagatagt |
27429307 |
T |
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| Q |
115 |
taatttgtgaatgttgtgagatatatcctatttacagcattcaaaatacaatggccacacactcctgatcctcatgaataatgattacttacctttatat |
214 |
Q |
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| T |
27429306 |
taatttgtgaatgttgtgagatatatcctatttacagcattcaaaatacaatggccacacactcctgatcctcatgaataatgattacttacctttatat |
27429207 |
T |
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| Q |
215 |
ataaagagagaaaataaagcatct--------ctttttgggttgtaaatgtttgaaagtgttatttgagtcgatacattgaaatgag |
293 |
Q |
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| T |
27429206 |
ataaagagagaaaataaagcatctctatttaactttttgggttgtcaatgtttgaaagtgttatttgagtcgatacattgaaatgag |
27429120 |
T |
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