View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3576_low_37 (Length: 298)

Name: NF3576_low_37
Description: NF3576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3576_low_37
NF3576_low_37
[»] chr7 (33 HSPs)
chr7 (20-288)||(327406-327674)
chr7 (20-198)||(620922-621100)
chr7 (200-288)||(282829-282917)
chr7 (20-192)||(528511-528683)
chr7 (218-264)||(10691314-10691360)
chr7 (202-260)||(24679100-24679158)
chr7 (197-264)||(7873504-7873571)
chr7 (198-265)||(29933524-29933591)
chr7 (245-288)||(282518-282561)
chr7 (221-264)||(10691641-10691684)
chr7 (201-264)||(43078055-43078118)
chr7 (201-264)||(43092032-43092095)
chr7 (198-259)||(21939331-21939392)
chr7 (218-263)||(42438029-42438074)
chr7 (212-264)||(7873883-7873935)
chr7 (202-264)||(29933190-29933252)
chr7 (218-263)||(26974246-26974291)
chr7 (218-263)||(42436845-42436890)
chr7 (196-264)||(46199047-46199115)
chr7 (220-259)||(9500159-9500198)
chr7 (221-260)||(30283425-30283464)
chr7 (218-268)||(30283714-30283763)
chr7 (222-264)||(34116118-34116160)
chr7 (218-263)||(1449999-1450044)
chr7 (218-263)||(18201370-18201415)
chr7 (222-263)||(30505134-30505175)
chr7 (222-263)||(40139549-40139590)
chr7 (222-263)||(40790923-40790964)
chr7 (221-257)||(5490523-5490559)
chr7 (221-257)||(5490924-5490960)
chr7 (212-260)||(9477143-9477191)
chr7 (224-260)||(9477446-9477482)
chr7 (196-260)||(26787922-26787986)
[»] chr4 (36 HSPs)
chr4 (198-288)||(41148161-41148251)
chr4 (197-288)||(53578883-53578974)
chr4 (201-283)||(41148533-41148615)
chr4 (202-264)||(53831152-53831214)
chr4 (221-263)||(1140618-1140660)
chr4 (213-263)||(30064013-30064063)
chr4 (218-263)||(6033865-6033910)
chr4 (218-263)||(31761855-31761900)
chr4 (199-264)||(47742228-47742293)
chr4 (201-260)||(3369846-3369905)
chr4 (197-264)||(13388156-13388222)
chr4 (221-263)||(1139175-1139217)
chr4 (202-268)||(5547613-5547679)
chr4 (221-263)||(14816860-14816902)
chr4 (218-263)||(8143049-8143094)
chr4 (212-264)||(5548005-5548057)
chr4 (200-264)||(30064352-30064416)
chr4 (196-264)||(35830297-35830365)
chr4 (212-264)||(47742596-47742648)
chr4 (224-263)||(31760788-31760827)
chr4 (220-259)||(37831610-37831649)
chr4 (220-263)||(40489229-40489272)
chr4 (196-263)||(44121040-44121107)
chr4 (199-258)||(53578602-53578661)
chr4 (222-268)||(3901695-3901740)
chr4 (218-255)||(6033904-6033941)
chr4 (218-263)||(7472437-7472482)
chr4 (218-263)||(8671999-8672044)
chr4 (218-255)||(15058836-15058873)
chr4 (218-263)||(29860833-29860878)
chr4 (222-263)||(35901805-35901846)
chr4 (218-263)||(44271442-44271487)
chr4 (218-259)||(53060426-53060467)
chr4 (226-263)||(53061801-53061838)
chr4 (200-260)||(21552913-21552973)
chr4 (212-264)||(33641861-33641913)
[»] chr8 (40 HSPs)
chr8 (201-286)||(755902-755987)
chr8 (200-288)||(756085-756173)
chr8 (200-288)||(2802976-2803064)
chr8 (197-288)||(6041084-6041174)
chr8 (197-288)||(6044716-6044806)
chr8 (212-288)||(4461684-4461760)
chr8 (224-288)||(26889619-26889683)
chr8 (218-288)||(6041425-6041495)
chr8 (218-288)||(6045062-6045132)
chr8 (201-288)||(11289275-11289361)
chr8 (218-264)||(45163712-45163758)
chr8 (218-263)||(23936295-23936340)
chr8 (196-264)||(1003797-1003864)
chr8 (196-288)||(2802642-2802734)
chr8 (212-264)||(17512107-17512159)
chr8 (212-264)||(35795583-35795635)
chr8 (195-260)||(45522447-45522512)
chr8 (246-288)||(11288996-11289038)
chr8 (198-288)||(14507930-14508020)
chr8 (218-263)||(45308470-45308515)
chr8 (212-264)||(14170432-14170484)
chr8 (218-254)||(18650947-18650983)
chr8 (212-264)||(23475634-23475686)
chr8 (198-260)||(9498905-9498967)
chr8 (196-250)||(26889287-26889341)
chr8 (218-263)||(5916909-5916954)
chr8 (218-263)||(12278851-12278896)
chr8 (218-263)||(20788050-20788095)
chr8 (212-264)||(1003468-1003520)
chr8 (221-257)||(34602033-34602069)
chr8 (212-264)||(35795227-35795279)
chr8 (225-259)||(12280358-12280392)
chr8 (198-260)||(29196618-29196680)
chr8 (218-263)||(8347567-8347612)
chr8 (218-263)||(31947870-31947915)
chr8 (218-263)||(45309574-45309619)
chr8 (221-257)||(27453145-27453181)
chr8 (221-257)||(27453534-27453570)
chr8 (212-260)||(29340778-29340826)
chr8 (199-259)||(41602868-41602928)
[»] chr5 (18 HSPs)
chr5 (200-288)||(42585984-42586072)
chr5 (201-285)||(42586318-42586402)
chr5 (199-264)||(6464327-6464392)
chr5 (200-264)||(20126436-20126500)
chr5 (199-264)||(36361030-36361095)
chr5 (198-263)||(38162589-38162654)
chr5 (221-264)||(20126670-20126713)
chr5 (218-264)||(36361413-36361459)
chr5 (218-255)||(26366085-26366122)
chr5 (218-263)||(38163668-38163713)
chr5 (224-260)||(42169422-42169458)
chr5 (197-256)||(2974894-2974953)
chr5 (201-251)||(128253-128303)
chr5 (199-260)||(20364679-20364740)
chr5 (218-263)||(38973344-38973388)
chr5 (222-263)||(38974930-38974971)
chr5 (223-255)||(7611095-7611127)
chr5 (204-260)||(34969153-34969209)
[»] chr1 (33 HSPs)
chr1 (212-288)||(12074966-12075042)
chr1 (201-286)||(12075244-12075328)
chr1 (202-288)||(2350064-2350150)
chr1 (212-283)||(23953083-23953154)
chr1 (200-267)||(3815045-3815112)
chr1 (203-260)||(37008218-37008275)
chr1 (212-264)||(40876997-40877049)
chr1 (218-263)||(7058376-7058421)
chr1 (212-264)||(46895792-46895844)
chr1 (220-263)||(3814778-3814821)
chr1 (222-263)||(50503721-50503762)
chr1 (218-263)||(51549393-51549438)
chr1 (235-291)||(23952730-23952786)
chr1 (196-264)||(41915774-41915842)
chr1 (196-264)||(46895431-46895499)
chr1 (225-264)||(15788433-15788472)
chr1 (221-263)||(50504803-50504845)
chr1 (213-263)||(50877809-50877859)
chr1 (218-263)||(41611257-41611302)
chr1 (222-263)||(51462200-51462241)
chr1 (196-268)||(366880-366952)
chr1 (200-260)||(367175-367235)
chr1 (221-264)||(6129618-6129661)
chr1 (220-258)||(4059540-4059578)
chr1 (202-264)||(7196676-7196738)
chr1 (218-259)||(4476198-4476239)
chr1 (218-263)||(49696918-49696963)
chr1 (200-264)||(7196963-7197027)
chr1 (219-263)||(11932919-11932963)
chr1 (201-265)||(39642199-39642263)
chr1 (212-264)||(40876710-40876762)
chr1 (224-264)||(43117277-43117317)
chr1 (222-258)||(48471883-48471919)
[»] chr2 (39 HSPs)
chr2 (202-286)||(4856709-4856792)
chr2 (201-286)||(8030125-8030210)
chr2 (200-264)||(14816049-14816113)
chr2 (218-263)||(11363898-11363943)
chr2 (218-263)||(21631834-21631879)
chr2 (218-263)||(28719333-28719378)
chr2 (196-260)||(35500347-35500411)
chr2 (213-264)||(17850486-17850537)
chr2 (202-264)||(14815698-14815760)
chr2 (218-263)||(52292-52337)
chr2 (222-263)||(16143687-16143728)
chr2 (201-264)||(12802456-12802519)
chr2 (222-264)||(8740440-8740482)
chr2 (197-259)||(20650365-20650427)
chr2 (201-255)||(36177351-36177405)
chr2 (218-263)||(10857355-10857400)
chr2 (218-263)||(14983953-14983998)
chr2 (218-263)||(23048306-23048351)
chr2 (218-263)||(23049817-23049862)
chr2 (222-263)||(23685842-23685883)
chr2 (218-263)||(32661687-32661732)
chr2 (218-263)||(36286406-36286451)
chr2 (218-263)||(44078542-44078587)
chr2 (223-263)||(16144923-16144963)
chr2 (199-263)||(28217125-28217189)
chr2 (196-258)||(4587854-4587916)
chr2 (197-255)||(14489471-14489529)
chr2 (197-263)||(21633320-21633386)
chr2 (221-263)||(23280883-23280925)
chr2 (222-264)||(39672673-39672715)
chr2 (225-263)||(43741754-43741792)
chr2 (218-263)||(2755202-2755247)
chr2 (202-259)||(15023095-15023152)
chr2 (202-259)||(16043282-16043339)
chr2 (222-263)||(28733236-28733277)
chr2 (213-250)||(29370727-29370764)
chr2 (194-259)||(34679347-34679412)
chr2 (222-263)||(43890120-43890161)
chr2 (226-263)||(44077094-44077131)
[»] chr6 (20 HSPs)
chr6 (222-278)||(2078186-2078242)
chr6 (218-263)||(28574559-28574604)
chr6 (218-263)||(11623175-11623220)
chr6 (218-263)||(12203908-12203953)
chr6 (237-287)||(6499786-6499836)
chr6 (222-264)||(10582150-10582192)
chr6 (201-263)||(22515972-22516034)
chr6 (218-259)||(2018574-2018615)
chr6 (221-263)||(29874456-29874498)
chr6 (222-263)||(22517486-22517527)
chr6 (201-249)||(9070136-9070184)
chr6 (201-249)||(12798726-12798774)
chr6 (220-263)||(4793829-4793872)
chr6 (212-255)||(7504883-7504926)
chr6 (224-255)||(29873066-29873097)
chr6 (222-263)||(2017192-2017233)
chr6 (218-263)||(2173872-2173917)
chr6 (218-263)||(4037054-4037099)
chr6 (202-255)||(30369784-30369837)
chr6 (196-260)||(12799048-12799112)
[»] chr3 (36 HSPs)
chr3 (202-264)||(53254963-53255025)
chr3 (200-264)||(53255276-53255340)
chr3 (218-263)||(51224942-51224987)
chr3 (212-264)||(37755189-37755241)
chr3 (218-260)||(2181331-2181373)
chr3 (218-260)||(17258186-17258228)
chr3 (218-263)||(17256584-17256629)
chr3 (218-263)||(32772033-32772078)
chr3 (218-263)||(36315805-36315850)
chr3 (218-263)||(40988614-40988659)
chr3 (196-260)||(3354941-3355005)
chr3 (212-276)||(6128492-6128555)
chr3 (201-264)||(32831480-32831543)
chr3 (196-263)||(54476037-54476104)
chr3 (222-264)||(51453561-51453603)
chr3 (218-263)||(10732400-10732445)
chr3 (222-263)||(32770671-32770712)
chr3 (218-263)||(33944862-33944907)
chr3 (218-259)||(50380171-50380212)
chr3 (218-263)||(50381559-50381604)
chr3 (222-263)||(51226503-51226544)
chr3 (218-263)||(55228059-55228104)
chr3 (219-263)||(5635365-5635409)
chr3 (224-263)||(5636660-5636699)
chr3 (253-288)||(8241230-8241265)
chr3 (196-263)||(46934240-46934307)
chr3 (201-255)||(12759502-12759556)
chr3 (220-258)||(34878547-34878585)
chr3 (197-259)||(36677519-36677581)
chr3 (197-259)||(36687601-36687663)
chr3 (203-252)||(32831161-32831210)
chr3 (225-262)||(33445802-33445839)
chr3 (218-259)||(40989655-40989696)
chr3 (224-257)||(44457445-44457478)
chr3 (230-263)||(49002754-49002787)
chr3 (218-259)||(54477326-54477367)
[»] scaffold0017 (2 HSPs)
scaffold0017 (212-284)||(27911-27983)
scaffold0017 (248-283)||(27563-27598)
[»] scaffold0854 (2 HSPs)
scaffold0854 (218-263)||(3380-3425)
scaffold0854 (218-263)||(1859-1904)
[»] scaffold0468 (1 HSPs)
scaffold0468 (197-264)||(10346-10413)
[»] scaffold0005 (1 HSPs)
scaffold0005 (221-263)||(22809-22851)
[»] scaffold0028 (2 HSPs)
scaffold0028 (218-263)||(32262-32307)
scaffold0028 (218-263)||(31995-32040)
[»] scaffold0097 (1 HSPs)
scaffold0097 (220-263)||(46918-46961)
[»] scaffold0419 (1 HSPs)
scaffold0419 (220-258)||(2979-3017)
[»] scaffold1301 (1 HSPs)
scaffold1301 (218-263)||(1300-1345)
[»] scaffold0354 (1 HSPs)
scaffold0354 (218-263)||(7362-7407)
[»] scaffold0286 (1 HSPs)
scaffold0286 (218-263)||(20124-20169)
[»] scaffold0019 (1 HSPs)
scaffold0019 (218-263)||(122582-122627)
[»] scaffold0016 (1 HSPs)
scaffold0016 (218-263)||(201246-201291)
[»] scaffold0725 (1 HSPs)
scaffold0725 (197-249)||(6698-6750)


Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 20 - 288
Target Start/End: Complemental strand, 327674 - 327406
Alignment:
Q  20 attgtgattgtggctcgcaccgatgcgcgccaagccctgtctcttgatgaggcactctataggtcaaggacatttgttgatgctggagctgatgttgttt 119  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  327674 attgtgattgtggctcgcaccgatgcgcgccaagccctgtctcttgatgaggcactctataggtcaaggacatttgctgatgctggagctgatgttgttt 327575  T
Q  120 ttatagacgcacttgcttccggacaagagatggaagctttttgtcaagtttctcctcttgttccaaaaatggtatgtttttaggcttaacaacagttgtg 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||    
T  327574 ttatagacgcacttgcttccagacaagagatggaagctttttgtcaagtttctcctcttgttccaaaaatggtatgtttttaggcttaatagcagttgtg 327475  T
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  327474 gccccctatgtttcaagaagttgcgattttggccccctaactaaaatgattcgattttggccccctatg 327406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 198
Target Start/End: Original strand, 620922 - 621100
Alignment:
Q  20 attgtgattgtggctcgcaccgatgcgcgccaagccctgtctcttgatgaggcactctataggtcaaggacatttgttgatgctggagctgatgttgttt 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  620922 attgtgattgtggctcgcaccgatgcgcgccaagccctgtctcttgatgaggcactctataggtcaagggcatttgctgatgctggagctgatgttgttt 621021  T
Q  120 ttatagacgcacttgcttccggacaagagatggaagctttttgtcaagtttctcctcttgttccaaaaatggtatgttt 198  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  621022 ttatagacgcacttgcttccagacaagagatggaagctttttgtcaagtttctcctcttgttccaaaaatggtatgttt 621100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 282917 - 282829
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  282917 taggcttaatagcagttttggcctcctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 282829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 192
Target Start/End: Original strand, 528511 - 528683
Alignment:
Q  20 attgtgattgtggctcgcaccgatgcgcgccaagccctgtctcttgatgaggcactctataggtcaaggacatttgttgatgctggagctgatgttgttt 119  Q
    ||||||||||||||||||| |||||| ||||||| | |||||||||| ||||||||    ||| ||| |   ||||  ||||||||||||||||||  ||    
T  528511 attgtgattgtggctcgcagcgatgcacgccaaggcgtgtctcttgaagaggcactggtgaggacaaagctttttgcagatgctggagctgatgtttgtt 528610  T
Q  120 ttatagacgcacttgcttccggacaagagatggaagctttttgtcaagtttctcctcttgttccaaaaatggt 192  Q
    ||||||| ||||||| ||| |   |||||||| ||||||||||||||||| |||||| |||||| ||| ||||    
T  528611 ttatagatgcacttggttctgttgaagagatgaaagctttttgtcaagttgctcctcgtgttcctaaactggt 528683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 10691314 - 10691360
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10691314 tggccccctatgtttcaagaagttgcgattttggccccctaactaaa 10691360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 202 - 260
Target Start/End: Complemental strand, 24679158 - 24679100
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||| ||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  24679158 ggcttaataacagttttggccccctatgtttcaagaaattgcgattttggccccctaac 24679100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 7873504 - 7873571
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||   ||||| || |||||||||||||||| |||||||||||||||||||||||||||    
T  7873504 ttttaggcttaattgcagttttgaccccctatgtttcaaggagttgcgattttggccccctaactaaa 7873571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 265
Target Start/End: Complemental strand, 29933591 - 29933524
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaa 265  Q
    ||||||||||| ||||||| || ||| |||||||| |||||||||||||||||||| |||||||||||    
T  29933591 tttaggcttaataacagttttgaccctctatgttttaagaagttgcgattttggcctcctaactaaaa 29933524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 288
Target Start/End: Original strand, 282518 - 282561
Alignment:
Q  245 attttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  282518 attttggccccctaactaaaataattcgattttggccccatatg 282561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 10691684 - 10691641
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  10691684 ccccctatgtttcaagaagttacgattttggccccctaactaaa 10691641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 43078118 - 43078055
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||| | ||| | ||||||||| |||||||||||||||||||||||||||||||| ||||    
T  43078118 aggcttaatagcagatttggccccctctgtttcaagaagttgcgattttggccccctaattaaa 43078055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 43092095 - 43092032
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||| | ||| | |||||||||||||||||||||||| | ||||||||||||||||||||    
T  43092095 aggcttaatagcagatttggccccctatgtttcaagaagttacaattttggccccctaactaaa 43092032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 21939392 - 21939331
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||||||| | ||||| |||||||||| || ||| ||||||||||||||||||||||||    
T  21939392 tttaggcttaatagcagttttggccccctaagtatcacgaagttgcgattttggccccctaa 21939331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 42438074 - 42438029
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  42438074 tggccctctatatttcaagaagttgcgattttggccccctaactaa 42438029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 7873935 - 7873883
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||||||||||||||||| ||| ||||||||| |||||||||||    
T  7873935 cagttttggccccctatgtttcaagaaattgtgattttggctccctaactaaa 7873883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 29933190 - 29933252
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||| | ||||| || || ||||||||||||||||||||||||||||||| |||| ||||    
T  29933190 ggcttaatagcagttttgacctcctatgtttcaagaagttgcgattttggccctctaattaaa 29933252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 26974246 - 26974291
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| ||||||||||||||||||||||| || |||||||    
T  26974246 tggccccctatatttcaagaagttgcgattttggctccttaactaa 26974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 42436845 - 42436890
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||    
T  42436845 tggccccctatgttttaagaagttacgattttggacccctaactaa 42436890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 46199047 - 46199115
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||| | ||||| || ||| |||| ||| |||||||||||||||||| ||||||| ||||    
T  46199047 tttttaggcttaatagcagttttgcccctctatattttaagaagttgcgattttggtcccctaaataaa 46199115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 259
Target Start/End: Complemental strand, 9500198 - 9500159
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  9500198 gccccctaagtttcaagaagttgcgattttggtcccctaa 9500159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 30283425 - 30283464
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||| |||||||||||||||||||||||||||||| ||||    
T  30283425 ccccttatgtttcaagaagttgcgattttggccccataac 30283464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 268
Target Start/End: Complemental strand, 30283763 - 30283714
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaaaataa 268  Q
    ||||||||||||| |||| |||||||||||||| |||||||| ||||||||    
T  30283763 tggccccctatgtatcaaaaagttgcgattttgaccccctaa-taaaataa 30283714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 34116160 - 34116118
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||| |||||||||||||||||||||  ||||||||||    
T  34116160 cccctatgtatcaagaagttgcgattttggcttcctaactaaa 34116118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 1449999 - 1450044
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||| |||||| ||||||| |||||||||||||||||||    
T  1449999 tggccacctatctttcaaaaagttgcaattttggccccctaactaa 1450044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 18201370 - 18201415
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| |||| |||| | |||||||||||||||||||||||||||    
T  18201370 tggcccactatctttctaaaagttgcgattttggccccctaactaa 18201415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 30505175 - 30505134
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  30505175 cccctatgtttcaagaagttgcgattttgtactcctaactaa 30505134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 40139549 - 40139590
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| |||| | |||||||||||||||||||||||||||    
T  40139549 cccctatctttctaaaagttgcgattttggccccctaactaa 40139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 40790964 - 40790923
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| |||| | |||||||||||||||||||||||||||    
T  40790964 cccctatctttccaaaagttgcgattttggccccctaactaa 40790923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 5490523 - 5490559
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccct 257  Q
    |||| |||||||||| |||||||||||||||||||||    
T  5490523 ccccttatgtttcaaaaagttgcgattttggccccct 5490559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 5490960 - 5490924
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccct 257  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  5490960 ccccctatgtttcaaaaagttgcaattttggccccct 5490924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 9477143 - 9477191
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||| ||||||||||||||| || ||||||||||||| ||||| ||||    
T  9477143 cagttttggccccctatgttttaaaaagttgcgattttagccccttaac 9477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 9477482 - 9477446
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||| || ||||||||||||||||||||||||    
T  9477482 cctatgttttaaaaagttgcgattttggccccctaac 9477446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 26787986 - 26787922
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||||||| |  |||| ||||||||||| |||||| |||||| |||||| ||| ||||||    
T  26787986 tttttaggcttaatagtagttttggccccctatatttcaaaaagttgtgatttttgcctcctaac 26787922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 41148161 - 41148251
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||||| | ||||| |||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  41148161 tttaggcttaatagcagttttggccccctatgtttcaagaagttccgattttagccccctaactaaaataattcgattttggccccctatg 41148251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 288
Target Start/End: Complemental strand, 53578974 - 53578883
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||||||||||| | | ||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||    
T  53578974 ttttaggcttaatagccgttttggccccctatgttttaagaagttgcgattttagccccttaactaaaataatttgattttggtcccctatg 53578883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 283
Target Start/End: Complemental strand, 41148615 - 41148533
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccc 283  Q
    |||||||| | ||||| ||||||||||| ||| ||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  41148615 aggcttaatagcagttttggccccctatattttaagaagttgtgattttggtcccctaactaaaataatttgattttggcccc 41148533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 53831152 - 53831214
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||| | ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||    
T  53831152 ggcttaatagcagttttggccccctatgttttaagaagttgcgattttggtcccctaactaaa 53831214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 1140660 - 1140618
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  1140660 ccccctatgtttcaagaagttgcgattttggacccctaactaa 1140618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 213 - 263
Target Start/End: Original strand, 30064013 - 30064063
Alignment:
Q  213 agttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||    
T  30064013 agttttggccccctatgttttaagaagttgcgattttggtcccctaactaa 30064063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 6033910 - 6033865
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||    
T  6033910 tggccccatatgtttcaagaagttgcgattttggccctctaactaa 6033865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 31761900 - 31761855
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||    
T  31761900 tggccccctatatttcaagaagttacgattttggccccctaactaa 31761855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 47742228 - 47742293
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| |||| | ||||| || || ||||||||||| |||||||||||||||||||||||||||||    
T  47742228 ttaggtttaatagcagttttgtccacctatgtttcaggaagttgcgattttggccccctaactaaa 47742293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 260
Target Start/End: Original strand, 3369846 - 3369905
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||| | ||||| | |||||||| || |||||||||||||||||||||||||||||    
T  3369846 aggcttaatatcagtttttgccccctaagtatcaagaagttgcgattttggccccctaac 3369905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 13388156 - 13388222
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||   ||||| ||||||||||||||||||||||| | |||||||| ||||||||||||    
T  13388156 ttttaggcttaattgcagttttggccccctatgtttcaagaagtagagattttgg-cccctaactaaa 13388222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 1139175 - 1139217
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  1139175 ccccctatggttcaagaagttgcgatttttgccccctaactaa 1139217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 268
Target Start/End: Original strand, 5547613 - 5547679
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataa 268  Q
    ||||||| | ||||| |||||| || | ||||||||||||| |||||||||| ||||||||||||||    
T  5547613 ggcttaatagcagttttggccctctgtatttcaagaagttgagattttggcctcctaactaaaataa 5547679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 14816902 - 14816860
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  14816902 ccccctatgtttctagaagttgcgattttggacccctaactaa 14816860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 8143049 - 8143094
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||||||| |||||||||||||||||| |||||||||||    
T  8143049 tggcctcctatgttttaagaagttgcgattttggacccctaactaa 8143094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 5548057 - 5548005
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||| ||||||||| |||||||||||||||||||| ||||| ||||    
T  5548057 cagttttggcctcctatgttttaagaagttgcgattttggcctcctaattaaa 5548005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 30064416 - 30064352
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||| |  |||| |||| ||||| |||| ||||||||||||||||||| |||||||||||    
T  30064416 taggcttaatagtagttttggctccctaagttttaagaagttgcgattttggctccctaactaaa 30064352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 35830365 - 35830297
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||| | ||||| ||||| ||||| ||||||||||||| |||||| | ||||||| ||||    
T  35830365 tttttaggcttaatagcagttttggcctcctatatttcaagaagttgtgatttttgtcccctaaataaa 35830297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 47742648 - 47742596
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| || |||||||||||| |||||||| ||||||| ||||||||||||||    
T  47742648 cagttttgaccccctatgttttaagaagttacgattttagccccctaactaaa 47742596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 263
Target Start/End: Original strand, 31760788 - 31760827
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||| ||||||||| ||||||||||||||||||||    
T  31760788 cctatgttttaagaagttgtgattttggccccctaactaa 31760827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 259
Target Start/End: Original strand, 37831610 - 37831649
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  37831610 gccccctaagttttaagaagttgcgattttggccccctaa 37831649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 40489229 - 40489272
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||| |||| | |||||||||||||||||||||||||||    
T  40489229 gccccctatctttctaaaagttgcgattttggccccctaactaa 40489272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 44121107 - 44121040
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||  ||| || ||||||||||| |||  | |||||||||||||| ||||||||||||    
T  44121107 tttttaggcttaattacacttttggccccctatcttttcaaaagttgcgattttgaccccctaactaa 44121040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 53578602 - 53578661
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggcccccta 258  Q
    |||||||||| ||||||| ||||| | ||||||| ||| ||| |||||||||||||||||    
T  53578602 ttaggcttaataacagttttggcctcttatgttttaagcagtcgcgattttggcccccta 53578661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Complemental strand, 3901740 - 3901695
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaaataa 268  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||    
T  3901740 cccctatgttttaagaagttgcgattttagccccctaa-taaaataa 3901695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 6033941 - 6033904
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    ||||||||||| ||| ||||||||||||||||||||||    
T  6033941 tggccccctatattttaagaagttgcgattttggcccc 6033904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 7472482 - 7472437
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||| ||||||||||||    
T  7472482 tggccccctatctttctaaaagttgcgattttgaccccctaactaa 7472437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 8672044 - 8671999
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| |||||||||||||||||||||||| | || ||||||||    
T  8672044 tggccccttatgtttcaagaagttgcgattttagacctctaactaa 8671999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 255
Target Start/End: Original strand, 15058836 - 15058873
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    |||||||||||||||||| | |||||||||||||||||    
T  15058836 tggccccctatgtttcaaaatgttgcgattttggcccc 15058873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 29860878 - 29860833
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||| || |||| | |||||||||||||||||||||||||||    
T  29860878 tggccccccatctttccaaaagttgcgattttggccccctaactaa 29860833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 35901846 - 35901805
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||| | |||||||||||||||| ||||||||||    
T  35901846 cccctatgtttctaaaagttgcgattttggctccctaactaa 35901805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 44271442 - 44271487
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||||| |||||| |||||||| |||||||||||    
T  44271442 tggccccctatatttcaataagttgtgattttggtcccctaactaa 44271487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 53060426 - 53060467
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||| ||||||| |||||| |||||||||||||||||||    
T  53060426 tggccccttatgttttaagaaggtgcgattttggccccctaa 53060467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Complemental strand, 53061838 - 53061801
Alignment:
Q  226 tatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| ||||||||||||||||| ||||||||||||    
T  53061838 tatgttttaagaagttgcgattttgaccccctaactaa 53061801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 21552973 - 21552913
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||| | ||||| ||||  |||||||||||||||||| |||||||| ||| |||||    
T  21552973 taggcttaatagcagttttggcaacctatgtttcaagaagttacgattttgaccctctaac 21552913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 33641861 - 33641913
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||| ||||||| ||||| ||||||||||| || ||||||||||    
T  33641861 cagttttggccccttatgttttaagaaattgcgattttgacctcctaactaaa 33641913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 1e-31; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 755902 - 755987
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccccta 286  Q
    |||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  755902 aggcttaatagcagttttggccctctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccccta 755987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 756173 - 756085
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||| | ||||| |||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  756173 taggcttaatagcagttttggctccctatgttttaagaagttgcgattttggccctctaactaaaataattcgattttggccccctatg 756085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 200 - 288
Target Start/End: Complemental strand, 2803064 - 2802976
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||| | ||||| ||  |||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2803064 taggcttaatagcagttttgatcccctatgtttacagaagttgcaattttggccccctaactaaaataattcgattttggccccctatg 2802976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 6041084 - 6041174
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  6041084 tttttggcttaataacagttttggccccctatgtttcaagaagttacgatttt-gacccataattaaaataattcgattttggccccctatg 6041174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 288
Target Start/End: Original strand, 6044716 - 6044806
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||| ||||||| ||||||| |||||||||||||||||||||||| ||||||| | ||| ||| ||||||||||||||||||||||||||||    
T  6044716 tttttggcttaataacagttttggccccctatgtttcaagaagttacgatttt-gacccataattaaaataattcgattttggccccctatg 6044806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 4461684 - 4461760
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||| ||||||| |||||||||| || |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4461684 cagttttggccccttatgtttcaaaaatttgcgattttggtcccctaactaaaataattcgattttgaccccctatg 4461760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 224 - 288
Target Start/End: Complemental strand, 26889683 - 26889619
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  26889683 cctatgttttaagaagttgcgattttgaccccctaactaaaataatttgattttggccccctatg 26889619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 6041495 - 6041425
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  6041495 tggccccctatgtttatagaagttgcgattttgatcccctaactaaaataattcgattttgaccccctatg 6041425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 288
Target Start/End: Complemental strand, 6045132 - 6045062
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||||||||||||||  ||||||||||||||||  |||||||||||||||||||||||||| |||||||||    
T  6045132 tggccccctatgtttatagaagttgcgattttgatcccctaactaaaataattcgattttgaccccctatg 6045062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 11289361 - 11289275
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||||||| | ||| | |||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||| |||||    
T  11289361 aggcttaatagcagctttggccccctatgtttcaagaagttgcgattctgg-tccctaacttaaataattcgattttggcccactatg 11289275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 45163758 - 45163712
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  45163758 tggccccctatgtttcaagaagttgcgattttggccccctaactaaa 45163712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 23936295 - 23936340
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23936295 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 23936340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 1003864 - 1003797
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||| |||||||||||    
T  1003864 tttttaggcttaataacagttttg-ccccctatgtttcaagaagttgcaattttggctccctaactaaa 1003797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Original strand, 2802642 - 2802734
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    |||||||| |||| | ||||| || |||||||||| | |||||||||||||||||| ||| ||||||||||||||| |||||| |||| ||||    
T  2802642 tttttaggtttaatagcagttttgaccccctatgtattaagaagttgcgattttggacccataactaaaataattcaattttgaccccatatg 2802734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 17512107 - 17512159
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||    
T  17512107 cagttttggccccctatatttcaagaagttgcgattttggccccctaactaaa 17512159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 35795635 - 35795583
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  35795635 cagttttggccccctatgtttcaagaagttgtgattttggccccctaactaaa 35795583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 45522512 - 45522447
Alignment:
Q  195 gtttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||||||||| | ||||| || |||||||||||| |||||||||||||||| ||||||||||    
T  45522512 gtttttaggcttaaaagcagttttgaccccctatgttttaagaagttgcgattttagccccctaac 45522447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 288
Target Start/End: Original strand, 11288996 - 11289038
Alignment:
Q  246 ttttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  11288996 ttttggccccctaactaaaataatttgattttggccccctatg 11289038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 14508020 - 14507930
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||||| | ||||| |||||||||||  ||  ||  ||||||||||| ||| ||||||||||||||||||||||||| ||| ||||    
T  14508020 tttaggcttaatatcagttttggccccctataattacagttgttgcgattttagcctcctaactaaaataattcgattttggtcccttatg 14507930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 45308470 - 45308515
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||||||||||||||  |||||||||||    
T  45308470 tggccccctatgtttcaagaagttgcgattttgaacccctaactaa 45308515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 14170432 - 14170484
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| || |||||||||||| |||||||||||||||||||||||||| ||||    
T  14170432 cagttttgaccccctatgttttaagaagttgcgattttggccccctaattaaa 14170484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 254
Target Start/End: Original strand, 18650947 - 18650983
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccc 254  Q
    |||||||||||||||||||||||||||||||||||||    
T  18650947 tggccccctatgtttcaagaagttgcgattttggccc 18650983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 23475634 - 23475686
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||||||||||||||||||||| ||||||| |||| ||||||||    
T  23475634 cagttttggccccctatgtttcaagaagttgtgattttgaccccttaactaaa 23475686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 260
Target Start/End: Original strand, 9498905 - 9498967
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||||| ||||||| |||||||||| || ||| ||||||||||||||| |||| ||||    
T  9498905 tttaggcttaataacagttttggccccctaagtatcaggaagttgcgattttgaccccataac 9498967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 250
Target Start/End: Original strand, 26889287 - 26889341
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttg 250  Q
    ||||||||||||| | ||||| |||||||||||||||| ||||||||| ||||||    
T  26889287 tttttaggcttaatagcagttttggccccctatgtttccagaagttgcaattttg 26889341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 5916954 - 5916909
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||    
T  5916954 tggccctctatgttttaagaagttgcgatttttgccccctaactaa 5916909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 12278851 - 12278896
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  12278851 tggccccctatgttttaagaagttgcgattttggatccctaactaa 12278896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 20788050 - 20788095
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||||    
T  20788050 tggccccctatgtttcaataagttgcaattttggccctctaactaa 20788095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 1003468 - 1003520
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||| ||||| ||| |||||||||||||||||||||| ||||||||    
T  1003468 cagttttggcctcctatattttaagaagttgcgattttggccccataactaaa 1003520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 34602033 - 34602069
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccct 257  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34602033 ccccctatgtttcaaaaagttgcgattttggccccct 34602069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 35795227 - 35795279
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| |||||||||||||||||| ||||||| |||||| ||||||| |||||    
T  35795227 cagttttggccccctatgtttcaaaaagttgcaattttgaccccctagctaaa 35795279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 259
Target Start/End: Complemental strand, 12280392 - 12280358
Alignment:
Q  225 ctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||| ||||||||||||||||||||||||||    
T  12280392 ctatgttttaagaagttgcgattttggccccctaa 12280358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 29196680 - 29196618
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||| |||| ||||||| ||||||||||| ||| |||||||||||||| ||| || |||||    
T  29196680 tttaggtttaataacagttttggccccctatattttaagaagttgcgattatggtcctctaac 29196618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 8347567 - 8347612
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||||||| ||||||||| |||||||| |||||||||||    
T  8347567 tggcctcctatgttttaagaagttgtgattttggacccctaactaa 8347612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 31947870 - 31947915
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||    
T  31947870 tggccccctatcttttcaaaagttgcgattttggccccctaactaa 31947915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 45309619 - 45309574
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| |||| |||||||||||||| |||||||||| ||||||||    
T  45309619 tggccctctatatttcaagaagttgcaattttggccctctaactaa 45309574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Original strand, 27453145 - 27453181
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccct 257  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  27453145 ccccctatgtttcaaaaagttgcgaatttggccccct 27453181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 257
Target Start/End: Complemental strand, 27453570 - 27453534
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccct 257  Q
    ||||||||||||||| |||||| ||||||||||||||    
T  27453570 ccccctatgtttcaaaaagttgtgattttggccccct 27453534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 260
Target Start/End: Original strand, 29340778 - 29340826
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||| ||||||||||||||| || || |||||||||||||||| ||||    
T  29340778 cagttttggccccctatgtttaaataatttgcgattttggccccttaac 29340826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 259
Target Start/End: Complemental strand, 41602928 - 41602868
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||||| | ||||| | |||||||| ||||||| ||||||||||||| ||| |||||    
T  41602928 ttaggcttaatagcagttttagccccctaagtttcaaaaagttgcgattttagcctcctaa 41602868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 200 - 288
Target Start/End: Original strand, 42585984 - 42586072
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  42585984 taggcttaatagcagttttggccccctatgtttcaagaagttgcgattttgaccccctaactaaaataattcgatttcggccccctatg 42586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 285
Target Start/End: Complemental strand, 42586402 - 42586318
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccct 285  Q
    |||||||| | ||||| |||||||| ||||||  |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  42586402 aggcttaatagcagttttggccccccatgtttacagaagttgcgattttggccccctaactaaaataatttgattttggccccct 42586318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 6464392 - 6464327
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6464392 ttaggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaa 6464327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 20126436 - 20126500
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||| |  |||| ||||||||||||||||||||||||| ||||||| |||||||||||||    
T  20126436 taggcttaataggagttttggccccctatgtttcaagaagttgtgattttgaccccctaactaaa 20126500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 36361030 - 36361095
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||   ||||| ||| |||||||||||||||||||||||||||||  ||||||||||||    
T  36361030 ttaggcttaattgcagttttggtcccctatgtttcaagaagttgcgattttgatcccctaactaaa 36361095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 38162589 - 38162654
Alignment:
Q  198 tttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||   || || ||||||||||||||||||||||||| |||||||| |||||||||||    
T  38162589 tttaggcttaattgcacttttggccccctatgtttcaagaagttgtgattttggacccctaactaa 38162654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 20126713 - 20126670
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||||| ||||||||||||||||| |||||||||||||    
T  20126713 ccccctatgttttaagaagttgcgattttgaccccctaactaaa 20126670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 36361459 - 36361413
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||| ||| |||||||||||||||||||||| ||||||||    
T  36361459 tggccccctatattttaagaagttgcgattttggccccttaactaaa 36361413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 255
Target Start/End: Complemental strand, 26366122 - 26366085
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  26366122 tggccccctatgtttcaagaagttgtgattttggcccc 26366085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 38163713 - 38163668
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||| ||| ||||||||||||||||||||||||||||||    
T  38163713 tggcctcctatattttaagaagttgcgattttggccccctaactaa 38163668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 260
Target Start/End: Complemental strand, 42169458 - 42169422
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||||||||||||||||||||| ||||||||||    
T  42169458 cctatgtttcaagaagttgcgattttagccccctaac 42169422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 197 - 256
Target Start/End: Complemental strand, 2974953 - 2974894
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccc 256  Q
    |||||||||||| | ||||| | ||||||||  ||||| |||||||||||||||||||||    
T  2974953 ttttaggcttaatagcagtttttgccccctaactttcacgaagttgcgattttggccccc 2974894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 128253 - 128303
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttgg 251  Q
    |||||||| | ||||| || ||||||||||||||||||||||| |||||||    
T  128253 aggcttaatagcagttttgaccccctatgtttcaagaagttgcaattttgg 128303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 199 - 260
Target Start/End: Original strand, 20364679 - 20364740
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||||| | ||||| || ||||||| || ||| ||||||||||||||| |||||||||    
T  20364679 ttaggcttaatagcagttttgtccccctaagtatcaggaagttgcgattttgaccccctaac 20364740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 38973344 - 38973388
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||||    
T  38973344 tggccccctatgttttaagaaattg-gattttggccccctaactaa 38973388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 38974971 - 38974930
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||||||||||| ||||| |||||||||||    
T  38974971 cccctatgttttaagaagttgcgaatttggacccctaactaa 38974930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 223 - 255
Target Start/End: Original strand, 7611095 - 7611127
Alignment:
Q  223 ccctatgtttcaagaagttgcgattttggcccc 255  Q
    |||||||||| ||||||||||||||||||||||    
T  7611095 ccctatgttttaagaagttgcgattttggcccc 7611127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 260
Target Start/End: Complemental strand, 34969209 - 34969153
Alignment:
Q  204 cttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||| || |||| |||||| |||||||| |||||||||||||||||| ||| ||||    
T  34969209 cttaataagagttttggccctctatgttttaagaagttgcgattttggacccataac 34969153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 212 - 288
Target Start/End: Original strand, 12074966 - 12075042
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||| |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12074966 cagttttggctccctatgtttcaagaagttgcgattttgaccccctaactaaaataattcgattttggccccctatg 12075042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 286
Target Start/End: Complemental strand, 12075328 - 12075244
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccccta 286  Q
    |||||||| | ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  12075328 aggcttaatagcagttttggccccctatgtttacagaagttgcgattttggccccctaactaaaataattcga-tttggcccccta 12075244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 202 - 288
Target Start/End: Complemental strand, 2350150 - 2350064
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccctatg 288  Q
    ||||||| ||||||| ||| || |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||    
T  2350150 ggcttaataacagttttggtcctctatgttttaagaagttgcgattttgaccccctaactaaaataattcgattttgactccctatg 2350064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 212 - 283
Target Start/End: Complemental strand, 23953154 - 23953083
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccc 283  Q
    ||||| ||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||    
T  23953154 cagttttggccccctatgtttcaagaagttgcgattttgacccctaaactaaaataatttgattttggcccc 23953083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 267
Target Start/End: Complemental strand, 3815112 - 3815045
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaata 267  Q
    ||||||||| | ||||| ||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  3815112 taggcttaatagcagttttgaacccctatgtttcaagaagttgcgattttggccccctaactaaaata 3815045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 203 - 260
Target Start/End: Original strand, 37008218 - 37008275
Alignment:
Q  203 gcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37008218 gcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaac 37008275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 40877049 - 40876997
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  40877049 cagttttggccccctatgttccaagaagttgcgattttggccccctaactaaa 40876997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 7058421 - 7058376
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  7058421 tggccccctatgtttcaagaagttgcgattttggacccctaactaa 7058376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 46895844 - 46895792
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  46895844 cagttttggccccctatgtttcaagaagttgcgattttgaccccataactaaa 46895792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 3814778 - 3814821
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  3814778 gccccctatgtttcaagaagttgtgattttggccccctaactaa 3814821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 50503721 - 50503762
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| ||||||||||||||||||||||||||||||    
T  50503721 cccctatgttttaagaagttgcgattttggccccctaactaa 50503762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 51549438 - 51549393
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||| ||||||||||||||||||||||| |||||||||||    
T  51549438 tggccccctaagtttcaagaagttgcgattttggacccctaactaa 51549393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 235 - 291
Target Start/End: Original strand, 23952730 - 23952786
Alignment:
Q  235 agaagttgcgattttggccccctaactaaaataattcgattttggccccctatgctt 291  Q
    ||||||||| |||||| ||| |||||||||||||||||||||||| ||| |||||||    
T  23952730 agaagttgcaattttgaccctctaactaaaataattcgattttggtcccttatgctt 23952786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 41915842 - 41915774
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||| | ||||| ||| ||||||| |||||||||||||||||||||  ||||||| ||||    
T  41915842 tttttaggcttaatagcagttttggtcccctatatttcaagaagttgcgattttgatcccctaaataaa 41915774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 264
Target Start/End: Original strand, 46895431 - 46895499
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||| | ||||| ||||||||||| |||||||||||||||||||||  || |||||||||    
T  46895431 ttttttggcttaatagcagttttggccccctatatttcaagaagttgcgattttgatcctctaactaaa 46895499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 225 - 264
Target Start/End: Original strand, 15788433 - 15788472
Alignment:
Q  225 ctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  15788433 ctatgtttcaagaagttgcgatattggccccctaactaaa 15788472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 50504845 - 50504803
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||| |||||||||||||||||| |||||||||||    
T  50504845 ccccctatgttttaagaagttgcgattttggacccctaactaa 50504803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 50877859 - 50877809
Alignment:
Q  213 agttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||| ||||| ||||||||| ||||||||||||| ||||||||||||||||    
T  50877859 agttctggccacctatgttttaagaagttgcgatattggccccctaactaa 50877809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 41611257 - 41611302
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  41611257 tggccccctatttttccaaaagttgcgattttggccccctaactaa 41611302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 51462200 - 51462241
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||||||||||| || ||||||||    
T  51462200 cccctatgtttcaagaagttgcgattttggacctctaactaa 51462241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 268
Target Start/End: Original strand, 366880 - 366952
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataa 268  Q
    |||| |||||||| | ||||| ||||||||||||||| ||||||||  ||||||  ||||||||| |||||||    
T  366880 ttttaaggcttaatagcagttttggccccctatgttttaagaagttatgattttaaccccctaaccaaaataa 366952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 260
Target Start/End: Complemental strand, 367235 - 367175
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||| | ||||| ||  ||||||| |||||||| ||||||||||||||||||||||    
T  367235 taggcttaatagcagttttgatcccctatatttcaagaggttgcgattttggccccctaac 367175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 221 - 264
Target Start/End: Complemental strand, 6129661 - 6129618
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||    
T  6129661 ccccctatgttttaagatgttgcgatttttgccccctaactaaa 6129618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 4059540 - 4059578
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggcccccta 258  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  4059540 gccccctatgtttcaaaatgttgcgattttggcccccta 4059578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 7196676 - 7196738
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||| | ||||| || ||| |||| ||||||||||||||||||||||||  |||||||||    
T  7196676 ggcttaatagcagttttgaccctctatatttcaagaagttgcgattttggcctgctaactaaa 7196738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 4476239 - 4476198
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||| |||| ||| ||||||||||||||||||||||||||    
T  4476239 tggccctctatattttaagaagttgcgattttggccccctaa 4476198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 49696963 - 49696918
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||| |||||| | ||| |||||||    
T  49696963 tggccccctatgtttcaagaagttgtgattttagacccttaactaa 49696918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 7197027 - 7196963
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||| | |||||  | |||| ||||||| ||||||||||||||||| | |||||||||||    
T  7197027 taggcttaatagcagtttcgaccccttatgttttaagaagttgcgattttgactccctaactaaa 7196963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 263
Target Start/End: Complemental strand, 11932963 - 11932919
Alignment:
Q  219 ggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||| |||||||||||||||||||| |||| || |||||||||||    
T  11932963 ggcctcctatgtttcaagaagttgcaatttgggacccctaactaa 11932919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 265
Target Start/End: Original strand, 39642199 - 39642263
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaa 265  Q
    |||||||| | ||||| | ||||||||  ||||| ||||||||||||||||||| |||| |||||    
T  39642199 aggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggccctctaaataaaa 39642263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 264
Target Start/End: Original strand, 40876710 - 40876762
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| || |||||||| ||||||||||||| |||||| ||| ||||||||||    
T  40876710 cagttttgaccccctatatttcaagaagttgtgattttagccacctaactaaa 40876762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 264
Target Start/End: Original strand, 43117277 - 43117317
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||||||||||||||||||||||| || |||| ||||    
T  43117277 cctatgtttcaagaagttgcgattttggtcctctaaataaa 43117317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 48471883 - 48471919
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggcccccta 258  Q
    |||||||||||||| | ||||||||||||||||||||    
T  48471883 cccctatgtttcaaaatgttgcgattttggcccccta 48471919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 8e-24; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 202 - 286
Target Start/End: Original strand, 4856709 - 4856792
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccccta 286  Q
    ||||||| | ||||| ||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  4856709 ggcttaatagcagttttggccccttatgtttcaagaagttgcgatttt-gacccctaactaaaataattcgattttggcccccta 4856792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 8030125 - 8030210
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggcccccta 286  Q
    |||||||| | ||||| |||||||||||||||  ||||||||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  8030125 aggcttaatagcagttttggccccctatgtttacagaagttgcaattttggtcccctaactaaaataattcgattatggcccccta 8030210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 14816113 - 14816049
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  14816113 taggcttaatagcagttttggccccctatgtttcaagaagttgcgattttggccccctaactaaa 14816049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 11363898 - 11363943
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  11363898 tggccccctatgtttcaagaagttgcgattttggctccctaactaa 11363943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 21631834 - 21631879
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  21631834 tggccccctatgtttcatgaagttgcgattttggccccctaactaa 21631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 28719333 - 28719378
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  28719333 tggccccctatgttttaagaagttgcgattttggccccctaactaa 28719378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 35500411 - 35500347
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||||||| |  |||| |||  ||||||||||||||||||||||||||||||||||||||    
T  35500411 tttttaggcttaatagtagttttggggccctatgtttcaagaagttgcgattttggccccctaac 35500347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 264
Target Start/End: Complemental strand, 17850537 - 17850486
Alignment:
Q  213 agttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  17850537 agttttggccccctatgttttaagaagttgcgattttggcctcctaactaaa 17850486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 14815698 - 14815760
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||| | ||||| ||||||||||||||||||||||||||| |||||| ||| ||||||||    
T  14815698 ggcttaatagcagttttggccccctatgtttcaagaagttgcggttttggtcccttaactaaa 14815760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 52337 - 52292
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||    
T  52337 tggccccctatgttttaagaatttgcgattttggccccctaactaa 52292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 16143687 - 16143728
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  16143687 cccctatatttcaagaagttgcgattttggccccctaactaa 16143728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 12802519 - 12802456
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||| | ||||| |||| ||||||||||||||||||||||||||||| |  |||||||||    
T  12802519 aggcttaatagcagttttggctccctatgtttcaagaagttgcgattttggtcttctaactaaa 12802456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 8740482 - 8740440
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  8740482 cccctatgtttcaagaagttgcgattttgaccccttaactaaa 8740440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 20650365 - 20650427
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||||| | | ||||| | |||||||| |||||||||||||| ||||||||||||||||    
T  20650365 ttttaggcttcatagcagttttagccccctaagtttcaagaagttgagattttggccccctaa 20650427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 255
Target Start/End: Complemental strand, 36177405 - 36177351
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    |||||||| ||||||| | ||||| || |||||||||||||||||||||||||||    
T  36177405 aggcttaataacagttttagccccttaagtttcaagaagttgcgattttggcccc 36177351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 10857355 - 10857400
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  10857355 tggccccctatctttccaaaagttgcgattttggccccctaactaa 10857400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 14983998 - 14983953
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||||    
T  14983998 tggccccgtatgttttaagaagttgcgattttggtcccctaactaa 14983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 23048306 - 23048351
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  23048306 tggccccttatattttaagaagttgcgattttggccccctaactaa 23048351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 23049862 - 23049817
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| ||||||||||||||||||||||||||| || ||||||||    
T  23049862 tggccctctatgtttcaagaagttgcgattttggacctctaactaa 23049817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 23685842 - 23685883
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||  ||||||||||||    
T  23685842 cccctatgtttcaagaagttgcgattttttccccctaactaa 23685883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 32661732 - 32661687
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  32661732 tggccccctatctttccaaaagttgcgattttggccccctaactaa 32661687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 36286451 - 36286406
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  36286451 tggccccctatctttccaaaagttgcgattttggccccctaactaa 36286406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 44078587 - 44078542
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  44078587 tggccccctatgttttaagaagttgcgattttggttccctaactaa 44078542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 223 - 263
Target Start/End: Complemental strand, 16144963 - 16144923
Alignment:
Q  223 ccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||| ||||||||||||||||||||| ||||||||    
T  16144963 ccctatgttttaagaagttgcgattttggccctctaactaa 16144923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 263
Target Start/End: Complemental strand, 28217189 - 28217125
Alignment:
Q  199 ttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||  ||| || |||| |||||| |||| | |||||||||||||||||||||||||||    
T  28217189 ttaggcttaattacacttttggctccctatctttctaaaagttgcgattttggccccctaactaa 28217125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 258
Target Start/End: Original strand, 4587854 - 4587916
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggcccccta 258  Q
    |||||||||| |||| || || | |||||||| ||||||| | ||||||||||||||||||||    
T  4587854 tttttaggctaaacaccacttttcgccccctaagtttcaaaatgttgcgattttggcccccta 4587916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 255
Target Start/End: Complemental strand, 14489529 - 14489471
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    |||||||||||| | ||||| | ||||||||  ||||| ||||||||||||||||||||    
T  14489529 ttttaggcttaatagcagttttcgccccctaactttcacgaagttgcgattttggcccc 14489471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 263
Target Start/End: Complemental strand, 21633386 - 21633320
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||   || || ||||||||||||||| |||||||||| | ||||| |||||||||||    
T  21633386 ttttaggcttaattgcacttttggccccctatgttttaagaagttgcaactttggacccctaactaa 21633320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 23280925 - 23280883
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||| |||| | |||||||||||||||||||||||||||    
T  23280925 ccccctatctttctaaaagttgcgattttggccccctaactaa 23280883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 39672715 - 39672673
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||||||||||||| |||||||| ||| ||||||||    
T  39672715 cccctatgtttcaagaagttgtgattttggtcccataactaaa 39672673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 263
Target Start/End: Complemental strand, 43741792 - 43741754
Alignment:
Q  225 ctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  43741792 ctatgtttcaagaagttgcgattttgatcccctaactaa 43741754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 2755247 - 2755202
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||    
T  2755247 tggccccctatcttttcaaaagttgcgattttggccccctaactaa 2755202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 15023152 - 15023095
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||| | ||||| ||||||||||  ||||||||||||| ||||||| ||||||||    
T  15023152 ggcttaatagcagttttggccccctaactttcaagaagttgtgattttgaccccctaa 15023095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 259
Target Start/End: Complemental strand, 16043339 - 16043282
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||||| ||||| | ||||||||  ||||| |||||| |||||||||||||||||    
T  16043339 ggcttaacagcagttttcgccccctaactttcacgaagttacgattttggccccctaa 16043282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 28733277 - 28733236
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| || ||||||||||||||||||| |||||||    
T  28733277 cccctatgttttaaaaagttgcgattttggccccttaactaa 28733236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 213 - 250
Target Start/End: Original strand, 29370727 - 29370764
Alignment:
Q  213 agttgtggccccctatgtttcaagaagttgcgattttg 250  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  29370727 agttttggccccctatgttttaagaagttgcgattttg 29370764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 194 - 259
Target Start/End: Complemental strand, 34679412 - 34679347
Alignment:
Q  194 tgtttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||| ||||||| | ||||| | ||||||||  ||||| ||||||| ||||||||||||||||    
T  34679412 tgttttttggcttaatagcagtttttgccccctaactttcacgaagttgtgattttggccccctaa 34679347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 43890120 - 43890161
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||||||||||||||||| ||| |||||||    
T  43890120 cccctatgtttgaagaagttgcgattttggtcccttaactaa 43890161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 263
Target Start/End: Original strand, 44077094 - 44077131
Alignment:
Q  226 tatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||| |||||||| |||||||||||    
T  44077094 tatgtttcaagaagttgtgattttggacccctaactaa 44077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 2e-21; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 278
Target Start/End: Original strand, 2078186 - 2078242
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttg 278  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2078186 cccctatgtttcaagaagttgcgattttgaccccctaactaaaataattcgattttg 2078242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 28574604 - 28574559
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28574604 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 28574559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 11623175 - 11623220
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  11623175 tggccctctatgtttcaagaagttgcgattttggccccctaactaa 11623220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 12203908 - 12203953
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  12203908 tggccccctatgtttcaagaagttgcgattttgaccccctaactaa 12203953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 6499786 - 6499836
Alignment:
Q  237 aagttgcgattttggccccctaactaaaataattcgattttggccccctat 287  Q
    ||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  6499786 aagttgcgattttggtcccctaactaaaataattcgattttgatcccctat 6499836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 10582192 - 10582150
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||| |||||||||||||||||||||||||||||||||||    
T  10582192 cccctatatttcaagaagttgcgattttggccccctaactaaa 10582150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 263
Target Start/End: Original strand, 22515972 - 22516034
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||  ||| || ||| |||||||||||||||||||||||||||||| |||||||||||    
T  22515972 aggcttaattacacttttggtcccctatgtttcaagaagttgcgattttggacccctaactaa 22516034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 2018615 - 2018574
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  2018615 tggccccttatgtttcaagaagttgcgattttggccccctaa 2018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Complemental strand, 29874498 - 29874456
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  29874498 ccccctatgtttcaagaagttgcgatttttgacccctaactaa 29874456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 22517527 - 22517486
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||| |||||||| ||||||||||||    
T  22517527 cccctatgtttcaagaagttacgattttgaccccctaactaa 22517486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 9070184 - 9070136
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgatttt 249  Q
    |||||||| | || || ||||||||||||||||||||||||||||||||    
T  9070184 aggcttaatagcatttttggccccctatgtttcaagaagttgcgatttt 9070136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 12798726 - 12798774
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgatttt 249  Q
    |||||||| | ||||| ||||||||||| ||||||||||||||||||||    
T  12798726 aggcttaatagcagttttggccccctatatttcaagaagttgcgatttt 12798774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Complemental strand, 4793872 - 4793829
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||| |||||||||||| |||||||||||||| |||||||||||    
T  4793872 gcccactatgtttcaagcagttgcgattttggacccctaactaa 4793829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 212 - 255
Target Start/End: Complemental strand, 7504926 - 7504883
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    ||||| ||||||||||| |||||||||||||| |||||||||||    
T  7504926 cagttttggccccctatatttcaagaagttgcaattttggcccc 7504883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 255
Target Start/End: Original strand, 29873066 - 29873097
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggcccc 255  Q
    ||||||||||||||||||||||||||||||||    
T  29873066 cctatgtttcaagaagttgcgattttggcccc 29873097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 2017192 - 2017233
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| |||||||||||||| |||||||| |||||||||||    
T  2017192 cccctaagtttcaagaagttgtgattttggacccctaactaa 2017233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 2173917 - 2173872
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||| ||||||||| | |||| |||||    
T  2173917 tggccccctatgtttcaagaagtagcgattttgactcccttactaa 2173872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 4037054 - 4037099
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||    
T  4037054 tggccccctatcttttcaaaagttgcgattttggccccctaactaa 4037099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 255
Target Start/End: Original strand, 30369784 - 30369837
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    ||||||| | ||||| ||||||| ||||||| ||||||||||||||||| ||||    
T  30369784 ggcttaatagcagttttggccccttatgttttaagaagttgcgattttgtcccc 30369837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 12799112 - 12799048
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||| |||| | ||||| | |||| |||| |||||||||||||||||||||| | ||||||    
T  12799112 tttttaggtttaatagcagttttagccctctatatttcaagaagttgcgattttggtcacctaac 12799048  T

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Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 53254963 - 53255025
Alignment:
Q  202 ggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  53254963 ggcttaataacagttttggccccctatgtttcaagaagttgcgattttggccctctaactaaa 53255025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 53255340 - 53255276
Alignment:
Q  200 taggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||| | ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  53255340 taggcttaatagcagttttggcctcctatgttttaagaagttgcgattttggccccctaactaaa 53255276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 51224942 - 51224987
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  51224942 tggcctcctatgtttcaagaagttgcgattttggccccctaactaa 51224987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 212 - 264
Target Start/End: Complemental strand, 37755241 - 37755189
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||    
T  37755241 cagttttggccccctatgtttcatgaagttgcgattttagccccctaactaaa 37755189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 2181331 - 2181373
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  2181331 tggccccctatgtttcaagaagttgcgattttggacccctaac 2181373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 260
Target Start/End: Complemental strand, 17258228 - 17258186
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  17258228 tggccccctatgtttcaagaagttgcgattttggacccctaac 17258186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 17256584 - 17256629
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  17256584 tggccccctatatttcaagaagttgcaattttggccccctaactaa 17256629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 32772078 - 32772033
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||    
T  32772078 tggccccctatgtttcaagaagttgtgattttggtcccctaactaa 32772033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 36315805 - 36315850
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||    
T  36315805 tggcccactatgtttcaagaagttgcgattttggacccctaactaa 36315850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 40988614 - 40988659
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||    
T  40988614 tggctccctatgtttcaagaagttgcgattttggtcccctaactaa 40988659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 196 - 260
Target Start/End: Complemental strand, 3355005 - 3354941
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaac 260  Q
    ||||||||||||| | ||| | |||||||||| || |||||||||||||||||||| ||||||||    
T  3355005 tttttaggcttaatagcagatttggccccctaagtatcaagaagttgcgattttggtcccctaac 3354941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 6128555 - 6128492
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattt 276  Q
    ||||| |||||| |||| ||| ||||||||||||||||| |||| ||||||||||||||||||||    
T  6128555 cagttttggcccactatattttaagaagttgcgattttgacccc-taactaaaataattcgattt 6128492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 32831543 - 32831480
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||||||| || |||| ||||||||||||||| || ||||||| ||||||| ||||||||||||    
T  32831543 aggcttaataatagttttggccccctatgtttaaaaaagttgcaattttggtcccctaactaaa 32831480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 263
Target Start/End: Original strand, 54476037 - 54476104
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||   || || ||||||||||| ||| ||||||||||||||||| ||||||||||||    
T  54476037 tttttaggcttaattgcacttttggccccctatattttaagaagttgcgattttgaccccctaactaa 54476104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 264
Target Start/End: Original strand, 51453561 - 51453603
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    ||||||||||| ||||||||||||||||| |||||||||||||    
T  51453561 cccctatgttttaagaagttgcgattttgaccccctaactaaa 51453603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 10732445 - 10732400
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| |||||||||||||||||||||||| | |||||||||||    
T  10732445 tggccccttatgtttcaagaagttgcgattttcgacccctaactaa 10732400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Original strand, 32770671 - 32770712
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||||||||||| | |||||||||    
T  32770671 cccctatgtttcaagaagttgcgattttggactcctaactaa 32770712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 33944907 - 33944862
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||| ||||||||||||||||||||||||||  |||||||||||    
T  33944907 tggccctctatgtttcaagaagttgcgattttgaacccctaactaa 33944862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 259
Target Start/End: Original strand, 50380171 - 50380212
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||| |||||||| ||||||||||||||||||||||||||    
T  50380171 tggccctctatgttttaagaagttgcgattttggccccctaa 50380212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 50381604 - 50381559
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||||    
T  50381604 tggctccctatgtttcaagaagttgcgattttggacccttaactaa 50381559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 222 - 263
Target Start/End: Complemental strand, 51226544 - 51226503
Alignment:
Q  222 cccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||||||||||||||||| |||||||||||    
T  51226544 cccctatgttttaagaagttgcgattttggacccctaactaa 51226503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 55228104 - 55228059
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| ||| |||||||||||||||||| |||||||||||    
T  55228104 tggccccctatattttaagaagttgcgattttggacccctaactaa 55228059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 263
Target Start/End: Original strand, 5635365 - 5635409
Alignment:
Q  219 ggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||    
T  5635365 ggccccctatgtttcaagatgttgtcattttggccccctaactaa 5635409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 263
Target Start/End: Complemental strand, 5636699 - 5636660
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  5636699 cctatgtttcaagaagttgcgattttggacctctaactaa 5636660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 253 - 288
Target Start/End: Complemental strand, 8241265 - 8241230
Alignment:
Q  253 cccctaactaaaataattcgattttggccccctatg 288  Q
    |||||||||||||||||||||||| |||||||||||    
T  8241265 cccctaactaaaataattcgatttcggccccctatg 8241230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 196 - 263
Target Start/End: Complemental strand, 46934307 - 46934240
Alignment:
Q  196 tttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||   || || ||||||||||| |||| | ||||||||||| |||||||||||||||    
T  46934307 tttttaggcttaattgcacttttggccccctatctttccaaaagttgcgattatggccccctaactaa 46934240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 201 - 255
Target Start/End: Original strand, 12759502 - 12759556
Alignment:
Q  201 aggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggcccc 255  Q
    |||||||| ||||||| | ||||||||  ||||||||| ||||||||||||||||    
T  12759502 aggcttaataacagtttttgccccctaactttcaagaaattgcgattttggcccc 12759556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 34878547 - 34878585
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggcccccta 258  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  34878547 gccccctatgtttcaaaatgttgcgattttggcccccta 34878585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 36677519 - 36677581
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||||||| ||||||| | |||| |||  ||||| ||||||||||||||||| ||||||    
T  36677519 ttttaggcttaataacagttttcgcccgctaactttcacgaagttgcgattttggctccctaa 36677581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 259
Target Start/End: Original strand, 36687601 - 36687663
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    |||||||||||| ||||||| | |||| |||  ||||| ||||||||||||||||| ||||||    
T  36687601 ttttaggcttaataacagttttcgcccgctaactttcacgaagttgcgattttggctccctaa 36687663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 252
Target Start/End: Original strand, 32831161 - 32831210
Alignment:
Q  203 gcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggc 252  Q
    |||||| | ||||| |||||||||||||||||||||||| | ||||||||    
T  32831161 gcttaatagcagttttggccccctatgtttcaagaagttacaattttggc 32831210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 33445802 - 33445839
Alignment:
Q  225 ctatgtttcaagaagttgcgattttggccccctaacta 262  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  33445802 ctatgtttcaagaagttgcgattgtggacccctaacta 33445839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 40989696 - 40989655
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||||||||||||||||||||| || ||||| |||||||    
T  40989696 tggccccctatgtttcaagaagttgtgagtttggacccctaa 40989655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 257
Target Start/End: Complemental strand, 44457478 - 44457445
Alignment:
Q  224 cctatgtttcaagaagttgcgattttggccccct 257  Q
    |||||||||||| |||||||||||||||||||||    
T  44457478 cctatgtttcaaaaagttgcgattttggccccct 44457445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 230 - 263
Target Start/End: Complemental strand, 49002787 - 49002754
Alignment:
Q  230 tttcaagaagttgcgattttggccccctaactaa 263  Q
    |||||||||||||||||||||| |||||||||||    
T  49002787 tttcaagaagttgcgattttggacccctaactaa 49002754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 54477367 - 54477326
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaa 259  Q
    ||||||||||||||| ||||||||| |||||||||| |||||    
T  54477367 tggccccctatgttttaagaagttgtgattttggcctcctaa 54477326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 284
Target Start/End: Complemental strand, 27983 - 27911
Alignment:
Q  212 cagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaaataattcgattttggccccc 284  Q
    ||||| || |||| |||||||  ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  27983 cagttttgaccccatatgtttacagaagttgcgattttggacccctaactaaaataattcgattatggccccc 27911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 248 - 283
Target Start/End: Original strand, 27563 - 27598
Alignment:
Q  248 ttggccccctaactaaaataattcgattttggcccc 283  Q
    ||||||| ||||||||||||||||||||||||||||    
T  27563 ttggccctctaactaaaataattcgattttggcccc 27598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 3425 - 3380
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  3425 tggcctcctatgttttaagaagttgcgattttggccccctaactaa 3380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 1859 - 1904
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||||||    
T  1859 tggcctcctatgtttcaagaagttgagattttggatccctaactaa 1904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 10346 - 10413
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgattttggccccctaactaaa 264  Q
    |||| ||||||| | ||||| ||||| ||||||||| ||||| |||| ||||||||||||||||||||    
T  10346 tttttggcttaatagcagttttggcctcctatgttttaagaaattgcaattttggccccctaactaaa 10413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 263
Target Start/End: Original strand, 22809 - 22851
Alignment:
Q  221 ccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||| ||||||||||||||||| |||||||||||    
T  22809 ccccctatgtttctagaagttgcgattttggacccctaactaa 22851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 32307 - 32262
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||||||||||||||||    
T  32307 tggccccctatctttccaaaagttgcgattttggccccctaactaa 32262  T

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Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 31995 - 32040
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | ||||||| |||||||||||||||||||    
T  31995 tggccccctatctttccaaaagttgcaattttggccccctaactaa 32040  T

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Target: scaffold0097 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 263
Target Start/End: Original strand, 46918 - 46961
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||| |||||| ||||||||||||| |||||||||||||    
T  46918 gccccctatctttcaaaaagttgcgattttagccccctaactaa 46961  T

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Target: scaffold0419 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 2979 - 3017
Alignment:
Q  220 gccccctatgtttcaagaagttgcgattttggcccccta 258  Q
    |||||||||||||||| | ||||||||||||||||||||    
T  2979 gccccctatgtttcaaaatgttgcgattttggcccccta 3017  T

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Target: scaffold1301 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1301
Description:

Target: scaffold1301; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 1345 - 1300
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||| ||| |||| | |||||||||||||||||||||||||||    
T  1345 tggccccttatctttccaaaagttgcgattttggccccctaactaa 1300  T

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Target: scaffold0354 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 7362 - 7407
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | |||||||||||||| ||||||||||||    
T  7362 tggccccctatctttctaaaagttgcgattttgtccccctaactaa 7407  T

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Target: scaffold0286 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Original strand, 20124 - 20169
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||||||||||||||| ||||||||| | |||| |||||    
T  20124 tggccccctatgtttcaagaagtagcgattttgactcccttactaa 20169  T

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Target: scaffold0019 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 122627 - 122582
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| |||| | ||||||||||||||||| |||||||||    
T  122627 tggccccctatctttccaaaagttgcgattttggcctcctaactaa 122582  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 263
Target Start/End: Complemental strand, 201291 - 201246
Alignment:
Q  218 tggccccctatgtttcaagaagttgcgattttggccccctaactaa 263  Q
    ||||||||||| ||  |||||||||||||||| |||||||||||||    
T  201291 tggccccctatattataagaagttgcgattttagccccctaactaa 201246  T

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Target: scaffold0725 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 6750 - 6698
Alignment:
Q  197 ttttaggcttaacaacagttgtggccccctatgtttcaagaagttgcgatttt 249  Q
    |||||||||||| | ||||| | |||||||| ||||||| |||||||||||||    
T  6750 ttttaggcttaatagcagttttagccccctaagtttcaacaagttgcgatttt 6698  T

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