View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3576_low_53 (Length: 247)
Name: NF3576_low_53
Description: NF3576
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3576_low_53 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 6057010 - 6057239
Alignment:
| Q |
18 |
aaatgtacttacaatttttgttgaagacaaaacaaaaaggaattatgaacaaatcattaactaaaagtatgaatctctttactttcaaactaggctaaat |
117 |
Q |
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| T |
6057010 |
aaatgtacttacaatttttgttgaagacaaaacaaaaaggaattatgaacaaatcattaactaaaagtatgaatctctttactttcaaactaggctaaat |
6057109 |
T |
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| Q |
118 |
aaactacactcaaataatagtttttattttgcaagataatgaagtaatcaagactgcaagagcataacaattaccagttgacaatagtagttcatgaaat |
217 |
Q |
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| T |
6057110 |
aaactacactcaaataatagtttttattttgcaagataatgaagtaatcaagactgcaagagcataacaattaccagttgacaatagtagttcatgaaat |
6057209 |
T |
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| Q |
218 |
ccttttatgatcaacatcaatgtcccttat |
247 |
Q |
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| T |
6057210 |
ccttttatgatcaacatcaatgtcccttat |
6057239 |
T |
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