View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3580_low_3 (Length: 232)
Name: NF3580_low_3
Description: NF3580
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3580_low_3 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 12023972 - 12024203
Alignment:
| Q |
1 |
cgtacagttaaaaacaaacaatgattccaaggatcctaaagaacaacaaccttaacaaaagatttccatgactaattgacatcatccacaagattatgta |
100 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12023972 |
cgtaaagttaaaaacaaacaatgattccaaggatcctaaagaacaacaaccttaacaaaagatttccatgactaattgacatcatccacaagattatgta |
12024071 |
T |
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| Q |
101 |
aaacaaacggccatgaaaagcatcactcagttacttacggactcagcagcactcaaccaaaatctaaacatgtagaaaacattgataataaataacagag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
12024072 |
aaacaaacggccatgaaaagcatcactcagttacttatggactcagcagcactcaaccaaaatctaaacatgtagaaaacatcgataataaataacagag |
12024171 |
T |
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| Q |
201 |
taaacgttatattttgtctggtgatgtgtcaa |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
12024172 |
taaacgttatattttgtctggtgatgtgtcaa |
12024203 |
T |
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