View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3581_low_7 (Length: 340)

Name: NF3581_low_7
Description: NF3581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3581_low_7
NF3581_low_7
[»] chr4 (49 HSPs)
chr4 (76-222)||(38687910-38688060)
chr4 (223-326)||(18887839-18887942)
chr4 (76-222)||(5970278-5970428)
chr4 (76-222)||(31227270-31227420)
chr4 (76-222)||(2385194-2385344)
chr4 (76-222)||(36099486-36099636)
chr4 (81-222)||(39877402-39877547)
chr4 (76-222)||(4758776-4758926)
chr4 (76-222)||(23125645-23125795)
chr4 (76-216)||(6246613-6246757)
chr4 (85-190)||(31854387-31854492)
chr4 (76-222)||(19485571-19485721)
chr4 (94-190)||(47948974-47949070)
chr4 (76-222)||(53621327-53621477)
chr4 (91-190)||(2279559-2279658)
chr4 (67-186)||(20688455-20688574)
chr4 (76-190)||(35328974-35329088)
chr4 (76-190)||(18430252-18430368)
chr4 (76-222)||(580410-580560)
chr4 (76-222)||(18135310-18135462)
chr4 (91-190)||(56216269-56216368)
chr4 (76-190)||(55292111-55292225)
chr4 (93-190)||(21221152-21221249)
chr4 (75-190)||(52535949-52536064)
chr4 (76-190)||(2411839-2411953)
chr4 (76-196)||(38046638-38046759)
chr4 (76-222)||(49122520-49122669)
chr4 (76-223)||(44199971-44200122)
chr4 (77-188)||(21229262-21229373)
chr4 (85-179)||(32517778-32517873)
chr4 (71-190)||(53303771-53303890)
chr4 (86-222)||(3085882-3086021)
chr4 (76-190)||(15170882-15170996)
chr4 (114-190)||(7350243-7350319)
chr4 (114-222)||(39834273-39834385)
chr4 (114-222)||(51833011-51833123)
chr4 (85-178)||(29833273-29833366)
chr4 (74-219)||(54611976-54612115)
chr4 (114-191)||(4698657-4698734)
chr4 (144-225)||(27006501-27006586)
chr4 (114-190)||(4698660-4698736)
chr4 (119-171)||(43413584-43413636)
chr4 (76-132)||(44111838-44111894)
chr4 (73-129)||(50121433-50121489)
chr4 (76-132)||(53225737-53225793)
chr4 (153-188)||(20114096-20114131)
chr4 (83-132)||(52378763-52378812)
chr4 (76-120)||(19150657-19150701)
chr4 (76-132)||(48361051-48361107)
[»] chr7 (33 HSPs)
chr7 (76-222)||(5347722-5347871)
chr7 (76-225)||(20397811-20397964)
chr7 (69-222)||(12763228-12763385)
chr7 (76-190)||(3411367-3411481)
chr7 (76-190)||(30866280-30866394)
chr7 (76-190)||(34281668-34281782)
chr7 (76-222)||(23248667-23248817)
chr7 (76-190)||(12426529-12426643)
chr7 (76-190)||(29770357-29770471)
chr7 (76-222)||(5909470-5909620)
chr7 (90-222)||(19979506-19979643)
chr7 (76-190)||(7107665-7107779)
chr7 (73-222)||(7463448-7463602)
chr7 (73-222)||(10599311-10599465)
chr7 (76-190)||(12085023-12085137)
chr7 (76-190)||(32050079-32050193)
chr7 (76-222)||(35427658-35427808)
chr7 (76-183)||(15074659-15074767)
chr7 (85-171)||(6173990-6174074)
chr7 (91-190)||(17351486-17351584)
chr7 (104-225)||(46449805-46449930)
chr7 (107-190)||(46680859-46680942)
chr7 (107-190)||(26563956-26564039)
chr7 (72-174)||(10007627-10007729)
chr7 (91-148)||(36655436-36655493)
chr7 (76-132)||(2523863-2523919)
chr7 (76-222)||(12426529-12426679)
chr7 (76-132)||(13807241-13807297)
chr7 (74-108)||(9575507-9575541)
chr7 (76-132)||(12763228-12763284)
chr7 (107-175)||(22055760-22055828)
chr7 (197-225)||(31319396-31319424)
chr7 (76-132)||(41850595-41850651)
[»] chr8 (35 HSPs)
chr8 (76-222)||(2339289-2339439)
chr8 (76-222)||(34028382-34028532)
chr8 (76-222)||(41915593-41915743)
chr8 (76-222)||(40465237-40465388)
chr8 (76-218)||(22781885-22782031)
chr8 (76-222)||(29563657-29563807)
chr8 (76-222)||(33642457-33642607)
chr8 (76-222)||(2229069-2229219)
chr8 (76-222)||(30923920-30924070)
chr8 (76-221)||(32159033-32159182)
chr8 (91-190)||(43295077-43295176)
chr8 (76-190)||(25848002-25848116)
chr8 (76-190)||(43135079-43135193)
chr8 (71-190)||(3799710-3799829)
chr8 (91-190)||(40834171-40834270)
chr8 (82-222)||(11293192-11293336)
chr8 (73-222)||(45145868-45146017)
chr8 (73-190)||(34157696-34157813)
chr8 (76-196)||(25878171-25878291)
chr8 (86-190)||(37564640-37564744)
chr8 (79-190)||(41569098-41569209)
chr8 (84-190)||(7668226-7668332)
chr8 (76-190)||(27793232-27793346)
chr8 (76-190)||(42189838-42189952)
chr8 (76-190)||(42351197-42351311)
chr8 (91-219)||(12270070-12270202)
chr8 (85-222)||(33837579-33837721)
chr8 (91-190)||(8242258-8242357)
chr8 (91-190)||(29916563-29916661)
chr8 (76-177)||(16928840-16928941)
chr8 (119-190)||(24255913-24255984)
chr8 (76-132)||(14113302-14113358)
chr8 (76-174)||(1223122-1223220)
chr8 (76-132)||(24619051-24619106)
chr8 (76-120)||(35149773-35149817)
[»] scaffold0123 (1 HSPs)
scaffold0123 (85-224)||(29241-29384)
[»] scaffold0007 (1 HSPs)
scaffold0007 (76-227)||(77344-77498)
[»] chr2 (42 HSPs)
chr2 (76-222)||(40430665-40430815)
chr2 (76-222)||(13775710-13775860)
chr2 (76-222)||(29866081-29866231)
chr2 (76-222)||(42263469-42263619)
chr2 (76-222)||(16241266-16241416)
chr2 (76-222)||(20427000-20427150)
chr2 (91-190)||(2100052-2100151)
chr2 (76-217)||(7765793-7765938)
chr2 (76-190)||(43657924-43658038)
chr2 (76-222)||(6761464-6761614)
chr2 (76-222)||(25891943-25892093)
chr2 (76-222)||(41260024-41260174)
chr2 (76-190)||(11362997-11363111)
chr2 (76-190)||(32750341-32750455)
chr2 (85-190)||(32197411-32197516)
chr2 (73-222)||(45065576-45065729)
chr2 (76-222)||(11711323-11711473)
chr2 (91-190)||(1944548-1944647)
chr2 (76-190)||(18452604-18452717)
chr2 (76-223)||(44737282-44737432)
chr2 (91-190)||(32880942-32881041)
chr2 (75-190)||(38598491-38598606)
chr2 (76-190)||(41205489-41205603)
chr2 (85-190)||(42341653-42341758)
chr2 (76-222)||(4740709-4740859)
chr2 (119-190)||(30864717-30864788)
chr2 (76-154)||(20360515-20360593)
chr2 (91-222)||(3264921-3265052)
chr2 (107-194)||(22857834-22857921)
chr2 (103-188)||(33913188-33913273)
chr2 (85-222)||(39377835-39377971)
chr2 (91-148)||(42470925-42470982)
chr2 (76-180)||(9152424-9152528)
chr2 (157-225)||(39377911-39377983)
chr2 (71-132)||(25892037-25892098)
chr2 (153-190)||(27182110-27182147)
chr2 (157-190)||(27596729-27596762)
chr2 (153-190)||(27831652-27831689)
chr2 (75-132)||(36881531-36881588)
chr2 (162-194)||(12032662-12032694)
chr2 (76-132)||(41153204-41153260)
chr2 (114-190)||(44736816-44736892)
[»] chr6 (22 HSPs)
chr6 (69-222)||(7405443-7405600)
chr6 (76-189)||(31971029-31971142)
chr6 (76-222)||(24949630-24949780)
chr6 (76-190)||(885601-885715)
chr6 (92-222)||(390820-390954)
chr6 (76-222)||(17225242-17225392)
chr6 (76-222)||(6047795-6047945)
chr6 (76-190)||(33859525-33859639)
chr6 (91-222)||(766441-766576)
chr6 (76-222)||(6045680-6045830)
chr6 (76-190)||(8558913-8559026)
chr6 (71-222)||(13144203-13144358)
chr6 (91-190)||(30686579-30686678)
chr6 (76-215)||(14931264-14931402)
chr6 (114-190)||(6801588-6801664)
chr6 (91-213)||(34639054-34639180)
chr6 (114-190)||(36353-36429)
chr6 (130-222)||(22898852-22898948)
chr6 (131-222)||(22880917-22881012)
chr6 (76-131)||(862817-862872)
chr6 (76-132)||(6047889-6047945)
chr6 (76-132)||(7405443-7405499)
[»] chr5 (36 HSPs)
chr5 (82-222)||(7749917-7750061)
chr5 (76-222)||(903965-904115)
chr5 (76-222)||(31802957-31803107)
chr5 (71-190)||(37699774-37699893)
chr5 (76-190)||(41815220-41815334)
chr5 (91-222)||(41989563-41989698)
chr5 (76-222)||(13144879-13145029)
chr5 (76-222)||(36417046-36417196)
chr5 (76-225)||(9601592-9601745)
chr5 (76-222)||(23411164-23411314)
chr5 (76-222)||(25027693-25027843)
chr5 (91-190)||(6338329-6338428)
chr5 (76-225)||(7053644-7053796)
chr5 (76-225)||(26898187-26898340)
chr5 (76-190)||(29374205-29374319)
chr5 (91-196)||(2825889-2825994)
chr5 (91-190)||(41046863-41046962)
chr5 (91-223)||(18353222-18353358)
chr5 (91-222)||(15569345-15569480)
chr5 (71-190)||(1643379-1643498)
chr5 (93-222)||(7945836-7945969)
chr5 (91-190)||(20578669-20578768)
chr5 (76-190)||(36418984-36419098)
chr5 (79-190)||(21090378-21090489)
chr5 (91-222)||(21610315-21610450)
chr5 (78-227)||(2959240-2959393)
chr5 (78-227)||(2967709-2967862)
chr5 (76-190)||(1108318-1108432)
chr5 (85-190)||(42311818-42311923)
chr5 (91-190)||(16089100-16089200)
chr5 (103-190)||(6910747-6910834)
chr5 (93-190)||(14338850-14338947)
chr5 (119-222)||(38393797-38393904)
chr5 (161-190)||(7272241-7272270)
chr5 (76-132)||(13789825-13789881)
chr5 (76-132)||(38394427-38394483)
[»] scaffold0002 (1 HSPs)
scaffold0002 (76-222)||(492304-492454)
[»] chr1 (33 HSPs)
chr1 (76-222)||(28989271-28989421)
chr1 (73-222)||(9301915-9302068)
chr1 (76-190)||(28359070-28359184)
chr1 (76-222)||(2352308-2352458)
chr1 (76-222)||(2961103-2961253)
chr1 (73-222)||(26544996-26545149)
chr1 (70-190)||(23398115-23398235)
chr1 (76-222)||(29312438-29312588)
chr1 (79-190)||(40161175-40161286)
chr1 (76-190)||(1673971-1674085)
chr1 (86-222)||(14281589-14281729)
chr1 (91-222)||(26550301-26550436)
chr1 (76-222)||(10380389-10380539)
chr1 (76-222)||(38830482-38830632)
chr1 (76-190)||(10065254-10065368)
chr1 (85-190)||(15289808-15289913)
chr1 (76-222)||(9548671-9548821)
chr1 (71-190)||(7796084-7796203)
chr1 (75-220)||(45536161-45536310)
chr1 (76-190)||(6784694-6784808)
chr1 (85-190)||(33325368-33325473)
chr1 (91-190)||(24594933-24595031)
chr1 (76-190)||(26733820-26733934)
chr1 (74-222)||(34718890-34719035)
chr1 (76-190)||(30264773-30264887)
chr1 (76-196)||(24463318-24463438)
chr1 (76-190)||(46320156-46320262)
chr1 (142-190)||(23537386-23537434)
chr1 (76-167)||(44939124-44939215)
chr1 (74-132)||(29256691-29256749)
chr1 (76-132)||(5368863-5368919)
chr1 (76-132)||(26550380-26550436)
chr1 (76-132)||(50155391-50155447)
[»] chr3 (46 HSPs)
chr3 (78-222)||(19202251-19202399)
chr3 (79-222)||(14768097-14768244)
chr3 (76-222)||(26999020-26999170)
chr3 (76-222)||(29019734-29019884)
chr3 (76-222)||(40214899-40215049)
chr3 (91-190)||(335389-335488)
chr3 (76-217)||(6086900-6087045)
chr3 (76-190)||(9190063-9190177)
chr3 (76-190)||(23825184-23825298)
chr3 (76-220)||(25113348-25113496)
chr3 (76-227)||(10049662-10049817)
chr3 (76-222)||(9465070-9465220)
chr3 (76-222)||(18765257-18765407)
chr3 (76-190)||(40464557-40464671)
chr3 (76-220)||(49122945-49123093)
chr3 (79-222)||(9440130-9440277)
chr3 (73-190)||(21653340-21653457)
chr3 (77-190)||(25846511-25846624)
chr3 (76-222)||(28945655-28945805)
chr3 (76-222)||(47449915-47450065)
chr3 (76-224)||(379067-379222)
chr3 (77-222)||(28564935-28565084)
chr3 (76-190)||(1122310-1122424)
chr3 (76-190)||(51698113-51698227)
chr3 (98-190)||(52114045-52114137)
chr3 (85-222)||(8243690-8243831)
chr3 (76-191)||(44593200-44593315)
chr3 (76-222)||(42605826-42605976)
chr3 (71-190)||(42225556-42225675)
chr3 (91-222)||(13826111-13826246)
chr3 (73-190)||(22003831-22003948)
chr3 (73-190)||(22011348-22011465)
chr3 (76-169)||(26123046-26123139)
chr3 (108-190)||(8825766-8825848)
chr3 (76-189)||(39341371-39341487)
chr3 (93-190)||(3484367-3484460)
chr3 (114-178)||(42841636-42841700)
chr3 (137-190)||(40141934-40141987)
chr3 (114-190)||(55139208-55139284)
chr3 (131-190)||(16660334-16660395)
chr3 (114-190)||(8987766-8987842)
chr3 (108-190)||(48593173-48593255)
chr3 (76-132)||(21662885-21662941)
chr3 (76-132)||(53442000-53442056)
chr3 (160-189)||(19880888-19880917)
chr3 (76-120)||(51516957-51517001)
[»] scaffold2107 (1 HSPs)
scaffold2107 (76-190)||(478-592)
[»] scaffold0246 (1 HSPs)
scaffold0246 (76-190)||(15190-15303)
[»] scaffold0221 (1 HSPs)
scaffold0221 (76-222)||(11029-11179)
[»] scaffold0144 (1 HSPs)
scaffold0144 (76-190)||(38860-38974)
[»] scaffold0024 (1 HSPs)
scaffold0024 (76-222)||(35953-36103)
[»] scaffold0592 (1 HSPs)
scaffold0592 (76-190)||(414-528)
[»] scaffold0009 (1 HSPs)
scaffold0009 (85-174)||(3639-3728)
[»] scaffold0067 (1 HSPs)
scaffold0067 (79-222)||(5215-5362)


Alignment Details
Target: chr4 (Bit Score: 105; Significance: 2e-52; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 38687910 - 38688060
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38687910 tactccctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 38688009  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| |||||||||||||    
T  38688010 taatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 38688060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 223 - 326
Target Start/End: Original strand, 18887839 - 18887942
Alignment:
Q  223 gtagagataatgtaagcaatacaatagagaagacctcatccttaaaaatgtatgttctagctgaaaagatggaatacgatttagtttgtttgtcgtaatg 322  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18887839 gtagagataatgtaagcaatacaatagagaagacctcatccttaaaaatgtatgttctagctgaaaagatggaatacgatttagtttgtttgtcgtaatg 18887938  T
Q  323 atga 326  Q
    ||||    
T  18887939 atga 18887942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 5970278 - 5970428
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5970278 tactcccttcggtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 5970377  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||| |||||||| ||||||   |||| ||||||| |||||| ||||||    
T  5970378 taatgtgtctaaaaagtaaattgtctcttgtaaataggaccggaaggagta 5970428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 31227420 - 31227270
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31227420 tactcccttcggtcctatttacaagagaaagttgactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 31227321  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| |||||| ||||||    
T  31227320 taatgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagta 31227270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 2385194 - 2385344
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  2385194 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatt 2385293  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| ||| |||||||||    
T  2385294 taatgtatctaaaaattaaattgtctcttgtaaataggaccagagggagta 2385344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 36099636 - 36099486
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  36099636 tactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 36099537  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  36099536 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 36099486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 81 - 222
Target Start/End: Complemental strand, 39877547 - 39877402
Alignment:
Q  81 ccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatg 180  Q
    ||||| ||| |||||| ||||||||||||||| ||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  39877547 ccttccgtcctatttacaagagaaagttgactttttaggtacattgaataatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatg 39877448  T
Q  181 tatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    |||||||||| ||||   |||||| ||||||| |||||||||||||    
T  39877447 tatctaaaaagtaaatcgtttcttgtaaataggaccggagggagta 39877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 4758776 - 4758926
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||    
T  4758776 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaatcaaatacataaattatt 4758875  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  4758876 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 4758926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 23125795 - 23125645
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| | ||| |||||| |||||||||||||   |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  23125795 tactccctccagtcttatttacaagagaaagttgatattttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 23125696  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  23125695 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 23125645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 6246757 - 6246613
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||| |||||| || |||| | ||||||||||||||||||||||||||||||||    
T  6246757 tactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatatatgtatttggtcaagaacctaaaccaaatacataaattatt 6246658  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggag 216  Q
    ||||||||||||||| ||||||   |||| |||||||||||||||    
T  6246657 taatgtatctaaaaagtaaattgtctcttgtaaatagaaccggag 6246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 31854387 - 31854492
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| || ||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  31854387 cggtcctaattacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatc 31854486  T
Q  185 taaaaa 190  Q
    ||||||    
T  31854487 taaaaa 31854492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 19485721 - 19485571
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||| | |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  19485721 tactccctccggtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatt 19485622  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    |||||||| |||||| ||||   |||||| ||||||| || ||||||||||    
T  19485621 taatgtatttaaaaagtaaattgtttcttgtaaataggacaggagggagta 19485571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 94 - 190
Target Start/End: Complemental strand, 47949070 - 47948974
Alignment:
Q  94 ttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||||| | |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  47949070 ttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 47948974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 53621327 - 53621477
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  53621327 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatgaagaacctaaaccaaatacataaattatt 53621426  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  53621427 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 53621477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 2279658 - 2279559
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2279658 tatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatgtatctaaaaa 2279559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 186
Target Start/End: Complemental strand, 20688574 - 20688455
Alignment:
Q  67 cttgtttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaataca 166  Q
    ||||| || |||| ||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  20688574 cttgtgtaatactacctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaataca 20688475  T
Q  167 taaattatttaatgtatcta 186  Q
    ||||||||| ||||||||||    
T  20688474 taaattattcaatgtatcta 20688455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 35329088 - 35328974
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| | |||| ||||||||| | ||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  35329088 tactccctccggtcctgtttacaagagaaaggtcactttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 35328989  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  35328988 taatgtatctaaaaa 35328974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 18430252 - 18430368
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactcttt--agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatta 173  Q
    ||||||||  |||| |||||| |||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  18430252 tactccctctggtcctatttacaagagaaagttgactctttttaaatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatta 18430351  T
Q  174 tttaatgtatctaaaaa 190  Q
    |||||||||||||||||    
T  18430352 tttaatgtatctaaaaa 18430368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 580410 - 580560
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || |||||| |||||||| |||||| ||||||||| |||||||||||| ||||| |||||| ||||||||||||||||||||||||||    
T  580410 tactccctccgatcctatttacaagagaaaattgactttttagatacgttgaataatgtatgtatccagtcaaaaacctaaaccaaatacataaattatt 580509  T
Q  176 taatgtatct-aaaaataaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||| |||||||||||   |||| ||||||| |||||||| ||||    
T  580510 taatgtatctaaaaaataaattgtctcttgtaaataggaccggaggtagta 580560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 18135310 - 18135462
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactcttt--agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatta 173  Q
    ||||||||  |||| |||||| |||||||||||||||||||  | ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  18135310 tactccctctggtcctatttacaagagaaagttgactctttttaaatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatta 18135409  T
Q  174 tttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    || |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  18135410 ttcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 18135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 56216368 - 56216269
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||| | ||||||||||||||||||||||||||||||||||||    
T  56216368 tatttataagagaaagttgactttttagatacattgaataatgtatgtatttagttaagaatccaaaccaaatacataaattatttaatgtatctaaaaa 56216269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 55292111 - 55292225
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||||| |||||| ||||||||||||||||||||||  ||||||||| |||||||||| |||||||||||||||||    
T  55292111 tacttcctccggtcctatttacaagagaaatttgactttttagatacattgaataatgtatatatctagtcgagaacctaaatcaaatacataaattatt 55292210  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  55292211 taatgtatctaaaaa 55292225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 21221249 - 21221152
Alignment:
Q  93 tttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||| | ||| ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21221249 tttataagagaaagatcactttttagatacattgaataatatatgtatctagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaa 21221152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 75 - 190
Target Start/End: Original strand, 52535949 - 52536064
Alignment:
Q  75 ttactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattat 174  Q
    ||||||||| || || ||||||||||| |||||| ||| |||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||    
T  52535949 ttactccctccgatcttatttataagaaaaagttaactttttagatacattgaataatgtatgtatctagttaaaaacctaaatcaaatacataaattat 52536048  T
Q  175 ttaatgtatctaaaaa 190  Q
    ||||||||| ||||||    
T  52536049 ttaatgtatataaaaa 52536064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 2411839 - 2411953
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||  | |||||||||||||| | ||| |||| ||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  2411839 tactccctccggttctgtttataagagaaagatcactttttaaatacattgaataatgtatgtatctagtcaagaatctaaactaaatacataaattatt 2411938  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  2411939 taatgtatctaaaaa 2411953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 38046759 - 38046638
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||||||||| || ||||||||||| |||||||| | |||||||||||||||||||||| |||| ||||||| || |||||||||||||||||||||||    
T  38046759 tactcccttcgatcgtatttataagataaagttgattttttagatacattgaataatgtatgtatttagtcaaaaatctaaaccaaatacataaattatt 38046660  T
Q  176 taatgtatct-aaaaataaatt 196  Q
    | || ||||| |||||||||||    
T  38046659 ttatatatctgaaaaataaatt 38046638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 49122520 - 49122669
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||  |||||| |||||| |||||||| |||||| ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  49122520 tactccctccggttctatttacaagagacagttgactttttaga-acattgaataatgtatgtatctagttaagaacctaaaccaaatatataaattatt 49122618  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  49122619 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 49122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 76 - 223
Target Start/End: Original strand, 44199971 - 44200122
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||  |||||| ||||||||||||| | ||| |||| |||||||||||||  |||||||||| ||| |||||||||||||||||||||||    
T  44199971 tactccctccggttctatttacaagagaaagttgatttttttgatatattgaataatgtatatatctagtcaggaatctaaaccaaatacataaattatt 44200070  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtag 223  Q
    || |||||||||||| ||||||   |||| ||||||  ||||||||||||||    
T  44200071 tagtgtatctaaaaagtaaattgtctcttgtaaataagaccggagggagtag 44200122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 77 - 188
Target Start/End: Complemental strand, 21229373 - 21229262
Alignment:
Q  77 actcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattattt 176  Q
    |||| |||||||| | | ||||||| |||| | | | |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  21229373 actctcttcggtcctgtctataagataaagatcattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattattt 21229274  T
Q  177 aatgtatctaaa 188  Q
    ||||||| ||||    
T  21229273 aatgtatttaaa 21229262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 85 - 179
Target Start/End: Original strand, 32517778 - 32517873
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacat-aaattatttaat 179  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||||| ||||||||| ||||||||||||    
T  32517778 cggtcctatttataagagaaagttgactttttagatacattgaataatatatgtatctagtcaagaatctaaatcaaatacataaaattatttaat 32517873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 53303890 - 53303771
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    |||| |||||||| ||||  |||||| |||||||| | |  | |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  53303890 tttactactccctccggtgctatttacaagagaaaatggtttttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaa 53303791  T
Q  171 ttatttaatgtatctaaaaa 190  Q
    ||||||| ||||||||||||    
T  53303790 ttatttagtgtatctaaaaa 53303771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 3085882 - 3086021
Alignment:
Q  86 ggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 185  Q
    |||| |||||| ||||||||  | ||| |||||| ||||||||||||||| |||| ||||||| ||| ||||||||||||||||||||||||||||||||    
T  3085882 ggtcctatttacaagagaaaaataactttttaga-acattgaataatgtatgtatttagtcaataacataaaccaaatacataaattatttaatgtatct 3085980  T
Q  186 -aaaaataaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||   |||| ||||||| |||||||||||||    
T  3085981 aaaaaataaattgtctcttgtaaataggaccggagggagta 3086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 15170882 - 15170996
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||| |||||||||||||| || ||| ||| |||||||| |||| |||||||||||||||||    
T  15170882 tactccctccggtcttatttacaagagaaaattgactttttaaatacattgaataatatatgtaactaatcaagaacataaatcaaatacataaattatt 15170981  T
Q  176 taatgtatctaaaaa 190  Q
     ||||||||||||||    
T  15170982 caatgtatctaaaaa 15170996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 7350243 - 7350319
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||| ||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7350243 tttaaatatattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 7350319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 39834385 - 39834273
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta-aaaataaatt---tcttataaataga 209  Q
    |||| ||||||||||||||||| ||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||||   |||| ||||||      
T  39834385 tttaaatacattgaataatgtatgtatctaatcaagaacctaaacaaaatatataaattatttaatgtatctaaaaaataaattgtctcttgtaaataag 39834286  T
Q  210 accggagggagta 222  Q
    |||||||||||||    
T  39834285 accggagggagta 39834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 114 - 222
Target Start/End: Complemental strand, 51833123 - 51833011
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatcta-aaaataaatt---tcttataaataga 209  Q
    |||||||||| |||||||||||  ||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||   |||| |||||||     
T  51833123 tttagatacaatgaataatgtatatatttattcaagaacctaaaccaaatacataaattatttaatgtatctaaaaaataaattgtctcttgtaaatagg 51833024  T
Q  210 accggagggagta 222  Q
    |||||| ||||||    
T  51833023 accggatggagta 51833011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 85 - 178
Target Start/End: Original strand, 29833273 - 29833366
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||| |||||| |||| ||| |||||| ||||||||||||||| ||| || |||| |||||||||||||||| ||||||||||||||||||||    
T  29833273 cggtcctatttacaagataaaattgactttttagatacattgaagaatatatgtatttagtcaagaacctaaatcaaatacataaattatttaa 29833366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 219
Target Start/End: Complemental strand, 54612115 - 54611976
Alignment:
Q  74 attactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatta 173  Q
    |||||| ||| || || |||||||||||||||||||||  |||| ||||||||||||||||| |||| |||           ||||||||||||||||||    
T  54612115 attacttcctccgatcttatttataagagaaagttgaccttttaaatacattgaataatgtatgtatttagc----------aaccaaatacataaatta 54612026  T
Q  174 tttaatgtatctaaaaa-taaatt---tcttataaatagaaccggaggga 219  Q
    ||||||||||||||||| ||||||   |||||||||||||||||||||||    
T  54612025 tttaatgtatctaaaaagtaaattgtgtcttataaatagaaccggaggga 54611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 191
Target Start/End: Complemental strand, 4698734 - 4698657
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaat 191  Q
    ||||||||||||||||||| || |||| | ||| |||| |||||||| |||||||||||||| |||||||||||||||    
T  4698734 tttagatacattgaataatttatgtatatggtctagaatctaaaccagatacataaattattcaatgtatctaaaaat 4698657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 144 - 225
Target Start/End: Complemental strand, 27006586 - 27006501
Alignment:
Q  144 gtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagta 225  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||   |||| ||||||| || |||||||||||||    
T  27006586 gtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggactggagggagtagta 27006501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 4698660 - 4698736
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||||||| || |||||| ||  |||  ||| |||| |||||||||||||| ||||||||||||||    
T  4698660 tttagatacattgaataatttatgtatctggtttagattctagaccatatacataaattattcaatgtatctaaaaa 4698736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 43413584 - 43413636
Alignment:
Q  119 atacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaat 171  Q
    ||||||||||||||||| |||| |||||| ||| |||||||| ||||||||||    
T  43413584 atacattgaataatgtatgtatgtagtcatgaatctaaaccagatacataaat 43413636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 44111894 - 44111838
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  44111894 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaat 44111838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 50121433 - 50121489
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaat 129  Q
    ||||||||||||||||| ||||||||||| ||| |||||| |||||||  |||||||    
T  50121433 tattactcccttcggtcttatttataagaaaaatttgactttttagatttattgaat 50121489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 53225793 - 53225737
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| ||| |||||| ||||||| |||||||||||    
T  53225793 tactccctccggtcctatttataagaaaaaattgactttttagattcattgaataat 53225737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 153 - 188
Target Start/End: Complemental strand, 20114131 - 20114096
Alignment:
Q  153 ctaaaccaaatacataaattatttaatgtatctaaa 188  Q
    ||||||||||||||||||||||| ||||||||||||    
T  20114131 ctaaaccaaatacataaattattcaatgtatctaaa 20114096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 52378812 - 52378763
Alignment:
Q  83 ttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    ||||||||||||||||||  |||  |||||||||||||| ||||||||||    
T  52378812 ttcggtcatatttataagcaaaaaatgactctttagatatattgaataat 52378763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 19150657 - 19150701
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagat 120  Q
    |||||||| ||||| ||||||||||| |||||||||| |||||||    
T  19150657 tactccctacggtcctatttataagaaaaagttgactttttagat 19150701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 48361051 - 48361107
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| ||| |||||| ||||||| |||||| ||||    
T  48361051 tactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaat 48361107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 8e-52; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 5347722 - 5347871
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  5347722 tactccctccggtcctatttataagagaaagttgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 5347821  T
Q  176 taatgtatctaaaaataaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  5347822 taatgtatctaaaagtaaattgtctcttgtaaataggaccggagggagta 5347871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 20397964 - 20397811
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||||||    
T  20397964 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaacaaaatacataaattatt 20397865  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagta 225  Q
    ||||||||||||||| ||||||   |||||||||||| ||||||||||||||||    
T  20397864 taatgtatctaaaaattaaattgtctcttataaataggaccggagggagtagta 20397811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 69 - 222
Target Start/End: Complemental strand, 12763385 - 12763228
Alignment:
Q  69 tgtttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacata 168  Q
    |||||| |||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12763385 tgtttaatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacata 12763286  T
Q  169 aattatttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||||||||||||| ||||||   |||| ||||||| |||| ||||||||    
T  12763285 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaagggagta 12763228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 3411481 - 3411367
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || ||||||||||||||| |||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  3411481 tactccctccgatcctatttataagagaaatttgactttttagatacattgaataatgtatgtacctagtcaagaacctaaaccaaatacataaattatt 3411382  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  3411381 taatgtatctaaaaa 3411367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 30866394 - 30866280
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  30866394 tactccctccggtcttatttacaagagaaagttgattttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 30866295  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  30866294 taatgtatctaaaaa 30866280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 34281668 - 34281782
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  34281668 tactccctccggtcctatttacaagagaaagttgactttttacatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 34281767  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  34281768 taatgtatctaaaaa 34281782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 23248667 - 23248817
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||| |||||||||| ||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  23248667 tactccctccggtcctatttacaagataaagttgactttttagatacattgaataatatatgtatttagtcaagaacctaaaccaaatacataaattatt 23248766  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  23248767 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 23248817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 12426529 - 12426643
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||| ||||||||||||| |||||||||    
T  12426529 tactccctccggtcttatttataagagaaagttaattttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacgtaaattatt 12426628  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  12426629 taatgtatctaaaaa 12426643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 29770471 - 29770357
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| ||||||||||  |||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  29770471 tactccatccggtcctatttataagttaaagttgactttttagatacattgaataatgcatgtatctagtcaagaacctaaaccaaatacataaattatt 29770372  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  29770371 taatgtatctaaaaa 29770357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 5909470 - 5909620
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| |||||||| |||||  |||||||||||| |||||||||  ||| ||||||||||||||||||||||||||||||||||    
T  5909470 tactcccttcggtcctatttacaagagaaaattgaccttttagatacattcaataatgtatatatttagtcaagaacctaaaccaaatacataaattatt 5909569  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  5909570 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 5909620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 90 - 222
Target Start/End: Original strand, 19979506 - 19979643
Alignment:
Q  90 atatttataagagaaagttgactcttt-agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 188  Q
    ||||||||||||||||||| ||| ||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  19979506 atatttataagagaaagttaacttttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 19979605  T
Q  189 aa-taaa---tttcttataaatagaaccggagggagta 222  Q
    || ||||   ||| || ||||| |||||||||||||||    
T  19979606 aagtaaattgtttattgtaaatggaaccggagggagta 19979643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 7107779 - 7107665
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||    
T  7107779 tactacctccggtcctatttacaagagaaagttgactttttagatacattgaataatttatgtatctagtcaaaaatctaaaccaaatacataaattatt 7107680  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  7107679 taatgtatctaaaaa 7107665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 7463602 - 7463448
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactcttt-agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaat 171  Q
    |||||||||||  |||| ||||||||||||||| |||||| ||| ||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||    
T  7463602 tattactccctctggtcctatttataagagaaaattgacttttttagatacattgaataatgtatgtatctaatcaagaatctaaaccaaatacataaat 7463503  T
Q  172 tatttaatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||| |||||||| |||||| ||||   |||||| ||||||| |||||||||||||    
T  7463502 tatgtaatgtatttaaaaagtaaattgtttcttgtaaataggaccggagggagta 7463448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 73 - 222
Target Start/End: Original strand, 10599311 - 10599465
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactcttt-agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaat 171  Q
    ||||||||| ||||||| |||||| |||| |||||||||| ||| ||||||||||||||||||| ||||||||||||  |||||||||||||||||||||    
T  10599311 tattactcctttcggtcctatttacaagataaagttgacttttttagatacattgaataatgtatgtatctagtcaaacacctaaaccaaatacataaat 10599410  T
Q  172 tatttaatgtatct-aaaaataaatt---tcttataaatagaaccggagggagta 222  Q
    ||||  |||||||| |||||||||||   |||| ||||||| | |||||||||||    
T  10599411 tattgtatgtatctaaaaaataaattgtctcttgtaaataggatcggagggagta 10599465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 12085023 - 12085137
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| |||||| |||||||| |||||| |||||||||||||||||||||| ||||  | ||||||||||||| |||||||||||||||||    
T  12085023 tactccatccggtcctatttacaagagaaaattgactgtttagatacattgaataatgtatgtattaaatcaagaacctaaatcaaatacataaattatt 12085122  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  12085123 taatgtatctaaaaa 12085137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 32050079 - 32050193
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||  ||||||||||||||| |||| | |||||||| ||||||||||||| ||||||| ||||||||||| |||||||||||||||||||    
T  32050079 tactccctccggttctatttataagagaaaattgattttttagatatattgaataatgtatgtatctactcaagaacctacaccaaatacataaattatt 32050178  T
Q  176 taatgtatctaaaaa 190  Q
    |||| ||||||||||    
T  32050179 taatatatctaaaaa 32050193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 35427658 - 35427808
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| ||||||||||| ||| ||||   |||| ||||||| ||||||||| |||| ||||||| ||| ||||||||||||||||||||||    
T  35427658 tactccctccggtcctatttataagataaaattgatcttttaaatacattcaataatgtatgtatatagtcaaaaacataaaccaaatacataaattatt 35427757  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  35427758 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 35427808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 183
Target Start/End: Complemental strand, 15074767 - 15074659
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactcttt-agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattat 174  Q
    |||||||||||||| | |||| ||||||||| | | ||||| |||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||    
T  15074767 tactcccttcggtcctgtttacaagagaaagatcattcttttagatacatcgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattat 15074668  T
Q  175 ttaatgtat 183  Q
    |||||||||    
T  15074667 ttaatgtat 15074659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 85 - 171
Target Start/End: Complemental strand, 6174074 - 6173990
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaat 171  Q
    ||||| ||||||||||||||  |||  | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  6174074 cggtcctatttataagagaa--ttgtttttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaat 6173990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 17351486 - 17351584
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||| ||||||||||| |  |||||||||||||||||| || ||||||| ||||||| |||||  ||||||||||||||||||| |||||||||||    
T  17351486 tatttataggagaaagttgatttgttagatacattgaataatttatgtatctactcaagaatctaaa-taaatacataaattatttaacgtatctaaaaa 17351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 46449805 - 46449930
Alignment:
Q  104 aagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa-taaatt---tct 199  Q
    ||||||||| ||||||||||||||||||| || |||| || | || || |||||||||||| |||||||||||||||||| |||||| | ||||   |||    
T  46449805 aagttgactttttagatacattgaataatttatgtatttaattaaaaatctaaaccaaatatataaattatttaatgtatttaaaaaattaattgtctct 46449904  T
Q  200 tataaatagaaccggagggagtagta 225  Q
    | ||||||||| ||||||||||||||    
T  46449905 tgtaaatagaatcggagggagtagta 46449930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 190
Target Start/End: Original strand, 46680859 - 46680942
Alignment:
Q  107 ttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| |||||| |||||||| ||||||  ||||||||||||||| |||| |||||| |||||||||||||||||||||||||    
T  46680859 ttgactttttagacacattgaagaatgtatatatctagtcaagaacttaaatcaaatatataaattatttaatgtatctaaaaa 46680942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 190
Target Start/End: Complemental strand, 26564039 - 26563956
Alignment:
Q  107 ttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| || |||||||||||||||| ||||||||| ||| |||| ||||||||||||||||| ||||| ||| ||||||||||    
T  26564039 ttgacttttcagatacattgaataatttacgtatctggtctagaatctaaaccaaatacataatttattcaatatatctaaaaa 26563956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 72 - 174
Target Start/End: Complemental strand, 10007729 - 10007627
Alignment:
Q  72 ttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaat 171  Q
    |||||||||||| ||||| ||||||||||| |||||||||| ||||||| ||||| |||||  | |||||| ||  ||||  || ||||||||||||| |    
T  10007729 ttattactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatt 10007630  T
Q  172 tat 174  Q
    |||    
T  10007629 tat 10007627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Complemental strand, 36655493 - 36655436
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaa 148  Q
    |||||| |||||||| |||| | ||||||||||||||| |||||| ||||||||||||    
T  36655493 tatttacaagagaaaattgaatttttagatacattgaacaatgtatgtatctagtcaa 36655436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 2523919 - 2523863
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  2523919 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 2523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 12426679 - 12426529
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||| |||| ||| |||||||||||| |||||| ||||||| | ||  |||  ||  || | ||||||| ||||||    
T  12426679 tacttcctccggtcttatttacaagagacagtttactttttagatacattaaataatttacgtatttggtttagattcttgactagatacatacattatt 12426580  T
Q  176 taatgtatctaaaaa--taaatt--tcttataaatagaaccggagggagta 222  Q
     ||||||||||||||  ||| ||  |||||||||||  |||||||||||||    
T  12426579 caatgtatctaaaaaattaactttctcttataaataagaccggagggagta 12426529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 13807241 - 13807297
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  13807241 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaat 13807297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 108
Target Start/End: Complemental strand, 9575541 - 9575507
Alignment:
Q  74 attactcccttcggtcatatttataagagaaagtt 108  Q
    |||||||||||||||| ||||||||||||||||||    
T  9575541 attactcccttcggtcctatttataagagaaagtt 9575507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 12763228 - 12763284
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||||||||| |||||| |||||| | || ||| |||||||||||| ||||||    
T  12763228 tactcccttcggtcctatttacaagagacaatttactttttagatacattaaataat 12763284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 22055760 - 22055828
Alignment:
Q  107 ttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| |||||||| |||||||||| || ||||  ||| |||||  ||||||||||| ||||||||||    
T  22055760 ttgactttttagatatattgaataatttatgtattcagtaaagaatttaaaccaaataaataaattatt 22055828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 197 - 225
Target Start/End: Complemental strand, 31319424 - 31319396
Alignment:
Q  197 tcttataaatagaaccggagggagtagta 225  Q
    |||||||||||||||||||||||||||||    
T  31319424 tcttataaatagaaccggagggagtagta 31319396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 41850595 - 41850651
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| |||||| | | ||||||| |||||||||||    
T  41850595 tactccctacggtcttatttataagaaaaagttaattttttagattcattgaataat 41850651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 101; Significance: 5e-50; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 2339439 - 2339289
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2339439 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 2339340  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  2339339 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 2339289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 34028532 - 34028382
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||  |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34028532 tactccctccggtcctatttacaagagaaagttgaccttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 34028433  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   || ||| ||||||| |||||||||||||    
T  34028432 taatgtatctaaaaagtaaattgttacttgtaaataggaccggagggagta 34028382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 41915743 - 41915593
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  41915743 tactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaataatctaaaccaaatacataaattatt 41915644  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||||||||||| |||||||||||||    
T  41915643 taatgtatctaaaaattaaattgtctcttataaataggaccggagggagta 41915593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 40465237 - 40465388
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || |||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40465237 tactccctccgatcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 40465336  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatag-aaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||||||||||| | ||||||||||||    
T  40465337 taatgtatctaaaaagtaaattttctcttataaatagtatccggagggagta 40465388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 218
Target Start/End: Complemental strand, 22782031 - 22781885
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||||||||||||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22782031 tacttcctccggtcctatttataagagaaagttgattttttggatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 22781932  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggaggg 218  Q
    ||||||||||||||| ||||   |||||| ||||||| |||||||||    
T  22781931 taatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggg 22781885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 29563807 - 29563657
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  29563807 tacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagttaagaacctaaaccaaatacataaattatt 29563708  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  29563707 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 29563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 33642607 - 33642457
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| |||||| ||||||||||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  33642607 tactccatccggtcttatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatt 33642508  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  33642507 taatgtatctaaaaagtaaattatctcttgtaaataggaccggagggagta 33642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 2229069 - 2229219
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2229069 tactccctccggtcctatttacaagagacagttgactttttagatacaatgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 2229168  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  2229169 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 30923920 - 30924070
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  30923920 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatt 30924019  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   | |||||||||| |||||||| ||||    
T  30924020 taatgtatctaaaaagtaaattgtcttttataaataggaccggaggtagta 30924070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 76 - 221
Target Start/End: Original strand, 32159033 - 32159182
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| |||||||| |||||| |||||||||||| ||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  32159033 tactcccttcggtcctatttacaagagaaatttgactttttagatacattaaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatt 32159132  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagt 221  Q
    ||||||||||||||| ||||||   |||| ||||||| | ||||||||||    
T  32159133 taatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagt 32159182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 43295077 - 43295176
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  43295077 tatttataagagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaa 43295176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 25848116 - 25848002
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  25848116 tactacctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 25848017  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  25848016 taatgtatctaaaaa 25848002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 43135193 - 43135079
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  43135193 tacttcctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 43135094  T
Q  176 taatgtatctaaaaa 190  Q
     ||||||||||||||    
T  43135093 caatgtatctaaaaa 43135079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 3799710 - 3799829
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    |||| |||||||| |||||  |||||||||||||||| | || |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  3799710 tttaatactccctccggtcccatttataagagaaagtcggctttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaa 3799809  T
Q  171 ttatttaatgtatctaaaaa 190  Q
    ||||||||||||| ||||||    
T  3799810 ttatttaatgtatttaaaaa 3799829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 40834270 - 40834171
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||| ||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40834270 tatttataagagaaaattgtctttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 40834171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 82 - 222
Target Start/End: Original strand, 11293192 - 11293336
Alignment:
Q  82 cttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgt 181  Q
    |||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||||    
T  11293192 cttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccatttacataaatgatttaatgt 11293291  T
Q  182 atctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    || |||||| ||||||   |||| ||||||| |||||||| ||||    
T  11293292 atttaaaaagtaaattgtctcttgtaaataggaccggaggaagta 11293336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 45146017 - 45145868
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| |||    ||||||||||||||||||| |||||||||    
T  45146017 tattactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgta----gtcaagaacctaaaccaaaaacataaatt 45145922  T
Q  173 atttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  45145921 atttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 45145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 34157813 - 34157696
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||||||| ||||| |||||| |||||||| |||| | ||| ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||    
T  34157813 tattactccctccggtcctatttacaagagaaatttgaatttttggatacatcgaataatgtatgtatttagtcaagaacctaaaccaaatacataaatt 34157714  T
Q  173 atttaatgtatctaaaaa 190  Q
    ||||||||||||||||||    
T  34157713 atttaatgtatctaaaaa 34157696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 196
Target Start/End: Original strand, 25878171 - 25878291
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| | ||| ||||||||||||||| |||||| |||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||     
T  25878171 tactccctccagtcctatttataagagaaaattgactttttaaatacattgaagaatgtatgtatctagtcaagaacctaaatcaaatacataaattata 25878270  T
Q  176 taatgtatctaaaaataaatt 196  Q
    |||||||||||||| ||||||    
T  25878271 taatgtatctaaaagtaaatt 25878291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 86 - 190
Target Start/End: Original strand, 37564640 - 37564744
Alignment:
Q  86 ggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 185  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||| |    
T  37564640 ggtcctatttataagagaaagttgactttttaaatacattgaataatgtatgcatctagttaagaacctaaaccaaatacataaattatttaatgtattt 37564739  T
Q  186 aaaaa 190  Q
    |||||    
T  37564740 aaaaa 37564744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 41569098 - 41569209
Alignment:
Q  79 tcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||| ||||| |||||| ||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||    
T  41569098 tccctccggtcctatttacaagagaaagttgattttttagatatattgaataatgtatgtatctagtcaagaacctcaaccaaatacataaattatttaa 41569197  T
Q  179 tgtatctaaaaa 190  Q
    | ||||||||||    
T  41569198 tatatctaaaaa 41569209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 84 - 190
Target Start/End: Complemental strand, 7668332 - 7668226
Alignment:
Q  84 tcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtat 183  Q
    |||||| |||||| |||||||| ||| || |||| ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  7668332 tcggtcctatttacaagagaaaattgtctttttaaatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatttaatgtat 7668233  T
Q  184 ctaaaaa 190  Q
    |||||||    
T  7668232 ctaaaaa 7668226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 27793346 - 27793232
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||| ||| |||||||||  ||||| ||||||||||||||||||||||||||||||||    
T  27793346 tactccctccggtcctatttacaagagaaagttgactttttagatatattcaataatgtatatatctggtcaagaacctaaaccaaatacataaattatt 27793247  T
Q  176 taatgtatctaaaaa 190  Q
    ||||| |||||||||    
T  27793246 taatgcatctaaaaa 27793232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 42189952 - 42189838
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| |||||||| || |||||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42189952 tactccttccggtcctatttatatgataaagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaattatt 42189853  T
Q  176 taatgtatctaaaaa 190  Q
    |||| ||| ||||||    
T  42189852 taatatatttaaaaa 42189838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 42351197 - 42351311
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||| ||||||| |||||||||||| |||||| || ||||||||||||||||||||| |||||| ||||||||||    
T  42351197 tactccctccggtcttatttacaagagaatgttgactttttagatacattaaataatatatgtatctagtcaagaacctaaatcaaatatataaattatt 42351296  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  42351297 taatgtatctaaaaa 42351311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 91 - 219
Target Start/End: Original strand, 12270070 - 12270202
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| ||||||||||| ||||||| ||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12270070 tatttacaagagaaagttgactttttagatacatcgaataatatatatatttagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 12270169  T
Q  191 -taaatt---tcttataaatagaaccggaggga 219  Q
     ||||||   |||| ||||||| ||||||||||    
T  12270170 gtaaattgtctcttgtaaataggaccggaggga 12270202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 33837721 - 33837579
Alignment:
Q  85 cggtcatatttataagagaaagttgactcttt-agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtat 183  Q
    ||||| |||||| ||||||||||||| | ||| | |||||||||||||| || ||||||||||||||| |||||| |||| |||||||||||||||||||    
T  33837721 cggtcctatttacaagagaaagttgatttttttaaatacattgaataatttatgtatctagtcaagaatctaaactaaatgcataaattatttaatgtat 33837622  T
Q  184 ctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||| ||||||   |||| |||||||||||||||||||||    
T  33837621 ctaaaaagtaaattgtctcttgtaaatagaaccggagggagta 33837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 8242357 - 8242258
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||| ||||| |||| | |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||    
T  8242357 tatttataaaagaaatttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaatcatttaatgtatttaaaaa 8242258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 29916661 - 29916563
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||  |||||| |||| |||||||||||| |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29916661 tatttataagagaagattgactttttatatacattgaatattgta-gtatttagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 29916563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 16928840 - 16928941
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| | ||| |||||| ||||||| ||||||  |||||||| |||||||||| || ||||||| ||||||| |||||||||||||||||||||||    
T  16928840 tactccctccagtcctatttacaagagaatgttgacattttagataaattgaataatttatgtatctactcaagaatctaaaccaaatacataaattatt 16928939  T
Q  176 ta 177  Q
    ||    
T  16928940 ta 16928941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 24255913 - 24255984
Alignment:
Q  119 atacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||| ||||||||| ||| |||| ||||||||||||||||  ||||| ||| ||| ||||||    
T  24255913 atacattgaataatttacgtatctggtctagaatctaaaccaaatacatactttattcaatttatttaaaaa 24255984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 14113358 - 14113302
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||||||||||||||| ||||  |||  ||||| |||||||||||||||||||    
T  14113358 tactcccttcggtcatatttctaagtaaaaaatgactttttagatacattgaataat 14113302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 1223122 - 1223220
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattat 174  Q
    |||||||| ||||||||||||||||| |||  ||||| ||||||| |||||  ||||  | |||||| ||||| ||  || ||||||||||||| ||||    
T  1223122 tactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatttat 1223220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 24619106 - 24619051
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| |||||||||||||||||  ||||||||| ||||||| |||||| ||||    
T  24619106 tactccctccggtcatatttataagaacaagttgact-tttagattcattgagtaat 24619051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 35149817 - 35149773
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagat 120  Q
    |||||||||||||| ||||||||||| |||||||| | |||||||    
T  35149817 tactcccttcggtcctatttataagaaaaagttgattttttagat 35149773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 85 - 224
Target Start/End: Complemental strand, 29384 - 29241
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29384 cggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 29285  T
Q  185 taaaaa-taaa---tttcttataaatagaaccggagggagtagt 224  Q
    |||||| ||||   |||||| ||||||| |||||||||||||||    
T  29284 taaaaagtaaattgtttcttgtaaataggaccggagggagtagt 29241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 227
Target Start/End: Original strand, 77344 - 77498
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||||||||||||||||||| || |||||||||||||||| || |||| |||||||||| |||||||||||||||||||||||    
T  77344 tactccctccggtcctatttataagagaaagttgacttttcagatacattgaataatttatgtatgtagtcaagaatctaaaccaaatacataaattatt 77443  T
Q  176 taatgtatctaaaaataaatt---tcttataaatagaaccggagggagtagtaga 227  Q
    |||||||||||||||| ||||   |||||||||||| ||||||||||||| ||||    
T  77444 taatgtatctaaaaattaattgtctcttataaataggaccggagggagtattaga 77498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 40430665 - 40430815
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||||||||| || ||||||||||||||| |||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40430665 tactcccttcgatcctatttataagagaaaattgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 40430764  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||||||||||| ||||||| |||||    
T  40430765 taatgtatctaaaaagtaaattgtctcttataaataggaccggagagagta 40430815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 13775860 - 13775710
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  13775860 tactccctccggtcctatttataagagaaagttgactttttagatacattaaataatgtatgtatctagtcaaaaacctaaaccaaatacataaattatt 13775761  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||| |||||||||| ||||||   |||| ||||||| |||||||||||||    
T  13775760 taatatatctaaaaagtaaattatctcttgtaaataggaccggagggagta 13775710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 29866231 - 29866081
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||| |||||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  29866231 tactccctccggtcctatttacaagataaagttgactttttaggtacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 29866132  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  29866131 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 29866081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 42263469 - 42263619
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  42263469 tactccctccggtcctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 42263568  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| || ||||||||||    
T  42263569 taatgtatctaaaaagtaaattgtttcttgtaaataggactggagggagta 42263619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 16241266 - 16241416
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  16241266 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 16241365  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  16241366 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 16241416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 20427150 - 20427000
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||||||  |||| ||||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  20427150 tactccctctggtcttatttataagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatt 20427051  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||| |||||||||| ||||||   |||| ||||||| |||||||||||||    
T  20427050 taatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 20427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 2100151 - 2100052
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2100151 tatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 2100052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 7765793 - 7765938
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||    
T  7765793 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataatttatt 7765892  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagg 217  Q
    ||||||||||||||| ||||||   |||||||||||| ||| ||||    
T  7765893 taatgtatctaaaaagtaaattgtctcttataaataggaccagagg 7765938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 43657924 - 43658038
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||| | |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  43657924 tactccctccggacttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaacctaaaccaaatacataaattatt 43658023  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  43658024 taatgtatctaaaaa 43658038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 6761614 - 6761464
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  6761614 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatt 6761515  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  6761514 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 6761464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 25891943 - 25892093
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || ||||||||||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  25891943 tactccctccgatcctatttataagagacagttgactttttagataaattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 25892042  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  25892043 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 25892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 41260174 - 41260024
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||||||| |||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  41260174 tacttcctccggtcctatttacaagagaaagtcgactttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 41260075  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||| ||||| ||||||   |||| ||||||| |||||||||||||    
T  41260074 taatgtatcaaaaaagtaaattgtctcttgtaaataggaccggagggagta 41260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 11362997 - 11363111
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || |||||| ||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  11362997 tactccctccgatcttatttacaagagaaagttgactttttagatgcattgaataatgtatctatctagtcaagaacctaaaccaaatacataaattatt 11363096  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  11363097 taatgtatctaaaaa 11363111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 32750341 - 32750455
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||     
T  32750341 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaatcaaatacataaattatg 32750440  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  32750441 taatgtatctaaaaa 32750455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 32197516 - 32197411
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| ||||||||||||| | |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||    
T  32197516 cggtcctatttacaagagaaagttgattttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatc 32197417  T
Q  185 taaaaa 190  Q
    ||||||    
T  32197416 taaaaa 32197411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 73 - 222
Target Start/End: Original strand, 45065576 - 45065729
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||||| | | ||| ||||||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||| |||||  |||||||||||||    
T  45065576 tattactccttccagtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatctagtctagaatctaaattaaatacataaatt 45065675  T
Q  173 atttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||||||||| ||||||   |||| |||||||||| ||||||||||    
T  45065676 atttaatgtatctaaaaagtaaattgtctcttgtaaatagaactggagggagta 45065729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 11711323 - 11711473
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| ||||||| ||||||  | ||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||    
T  11711323 tactccattcggtcctatttacgaaagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaagtcaaatacataaattatt 11711422  T
Q  176 taatgtatc-taaaaataaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||| ||||| ||||||   |||| ||||||| |||||||||||||    
T  11711423 taatgtatcttaaaagtaaattgtctcttgtaaataggaccggagggagta 11711473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 1944548 - 1944647
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| || |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||||||    
T  1944548 tatttacaaaagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaattcatatattatttaatgtatctaaaaa 1944647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 18452717 - 18452604
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| |||||| |||||||| |||| ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  18452717 tactcccttcggtcctatttacaagagacagttgacttttta-atatattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatt 18452619  T
Q  176 taatgtatctaaaaa 190  Q
     ||||||||||||||    
T  18452618 caatgtatctaaaaa 18452604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 76 - 223
Target Start/End: Original strand, 44737282 - 44737432
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||    
T  44737282 tactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaatct-aaccaaatacataaattatt 44737380  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtag 223  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| |||||    
T  44737381 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtag 44737432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 32881041 - 32880942
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| |||| |||||||||| |||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  32881041 tatttacaagataaagttgactttttagatatattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaa 32880942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 38598606 - 38598491
Alignment:
Q  75 ttactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattat 174  Q
    ||||| ||| ||||| |||||| || |||||||| ||| ||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  38598606 ttacttcctccggtcctatttacaaaagaaagtttactttttagatacattgaataatatatgtatctggtcaagaacctaaaccaaatacataaattat 38598507  T
Q  175 ttaatgtatctaaaaa 190  Q
    ||||| ||| ||||||    
T  38598506 ttaatatatataaaaa 38598491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 41205489 - 41205603
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||||||||| |||||||||||||||||||| | |||||||| |||||||||| || ||||||||| || ||  ||||||||||||||||||||||    
T  41205489 tacttccttcggtcttatttataagagaaagttgattttttagatatattgaataatttatgtatctagtaaaaaatataaaccaaatacataaattatt 41205588  T
Q  176 taatgtatctaaaaa 190  Q
    |||| ||||||||||    
T  41205589 taatatatctaaaaa 41205603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 42341758 - 42341653
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| |||||||| |||| | |||| ||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||     
T  42341758 cggtcctatttacaagagaaaattgattttttaaatacattgaataatgtatgtatctaatcaagaatctaaaccaaatacataaattatttaatgtatt 42341659  T
Q  185 taaaaa 190  Q
    ||||||    
T  42341658 taaaaa 42341653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 4740859 - 4740709
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| |||||| ||||||||||| ||| |||| ||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||||||    
T  4740859 tactccttccggtcttatttacaagagaaagttaactttttaaatacattgaataatgtatgtatctaatcaagaacctataccaaatatataaattatt 4740760  T
Q  176 taatgtatctaaaaa--taa--atttcttataaatagaaccggagggagta 222  Q
    |||| ||| ||||||  |||   |||||| ||||||| |||||||||||||    
T  4740759 taatatatataaaaagttaattgtttcttgtaaataggaccggagggagta 4740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 30864717 - 30864788
Alignment:
Q  119 atacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30864717 atacattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 30864788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 20360593 - 20360515
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacct 154  Q
    |||||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  20360593 tactccctccggttctatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacct 20360515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 3265052 - 3264921
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||| || ||||| | |||||||||||||||||||||| |||| ||||||||||| ||||||||    |||||||||||||||||||||||||    
T  3265052 tatttataagataatgttgattttttagatacattgaataatgtatgtatttagtcaagaacttaaaccaa----ataaattatttaatgtatctaaaaa 3264957  T
Q  191 -taaatt---tcttataaatagaaccggagggagta 222  Q
     ||||||   |||| ||||||||| |||| ||||||    
T  3264956 gtaaattgtctcttgtaaatagaatcggaaggagta 3264921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 107 - 194
Target Start/End: Original strand, 22857834 - 22857921
Alignment:
Q  107 ttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaataaa 194  Q
    |||||| ||||||||||||||||||| || ||||||  || |||| ||||||||||||||||||||||| | ||||||||||||||||    
T  22857834 ttgactttttagatacattgaataatttatgtatctgatctagaatctaaaccaaatacataaattattcattgtatctaaaaataaa 22857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 33913273 - 33913188
Alignment:
Q  103 aaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaa 188  Q
    |||||||| | |||| ||| ||| ||||| ||| |||||||||| |||| ||||||||||||||||||||||||||| ||||||||    
T  33913273 aaagttgattttttaaatatattaaataacgtatgtatctagtcgagaatctaaaccaaatacataaattatttaatatatctaaa 33913188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 85 - 222
Target Start/End: Complemental strand, 39377971 - 39377835
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| |||||| | || ||| |||||||||||  |||||| || |||| | |||||     ||||||||||||||||||||||| |||||||    
T  39377971 cggtcctatttacaagagacaatttactttttagatacatcaaataatttatgtatttggtcaa-----taaaccaaatacataaattatttgatgtatc 39377877  T
Q  185 taaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||| ||||||   |||| ||||||| |||||||||||||    
T  39377876 taaaaagtaaattgtctcttgtaaataggaccggagggagta 39377835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 42470925 - 42470982
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaa 148  Q
    ||||||||| |||||||||| | | ||||||||||||||||||||  |||||||||||    
T  42470925 tatttataaaagaaagttgattttgtagatacattgaataatgtatatatctagtcaa 42470982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 180
Target Start/End: Complemental strand, 9152528 - 9152424
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||| | | |||||| ||||||| |||||| ||||  | |||||||||| | ||  || ||||||||||| |||||||    
T  9152528 tactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatt 9152429  T
Q  176 taatg 180  Q
    |||||    
T  9152428 taatg 9152424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 39377911 - 39377983
Alignment:
Q  157 accaaatacataaattatttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagta 225  Q
    |||||||||||||||||||| ||||||||||||| ||||||   |||| ||||||| |||||| | |||||||    
T  39377911 accaaatacataaattatttgatgtatctaaaaagtaaattgtctcttgtaaataggaccggaagaagtagta 39377983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 25892098 - 25892037
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    ||||||||| ||| ||||| |||||| |||||| | || ||| |||||||||||||||||||    
T  25892098 tttattactacctccggtcctatttacaagagacaatttactttttagatacattgaataat 25892037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 27182147 - 27182110
Alignment:
Q  153 ctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  27182147 ctaaaccaaatacataaattattcaatgtatctgaaaa 27182110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 190
Target Start/End: Original strand, 27596729 - 27596762
Alignment:
Q  157 accaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||||||| ||||||||||||||    
T  27596729 accaaatacataaattattcaatgtatctaaaaa 27596762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Complemental strand, 27831689 - 27831652
Alignment:
Q  153 ctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||||||||||| ||||||||| ||||    
T  27831689 ctaaaccaaatacataaattattcaatgtatctgaaaa 27831652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 132
Target Start/End: Original strand, 36881531 - 36881588
Alignment:
Q  75 ttactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    ||||||||| ||||  ||||||||||| ||| |||||| |||||||||||||| ||||    
T  36881531 ttactccctccggttctatttataagaaaaatttgactttttagatacattgagtaat 36881588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 162 - 194
Target Start/End: Complemental strand, 12032694 - 12032662
Alignment:
Q  162 atacataaattatttaatgtatctaaaaataaa 194  Q
    |||||| ||||||||||||||||||||||||||    
T  12032694 atacattaattatttaatgtatctaaaaataaa 12032662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 41153260 - 41153204
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| || || ||||||||||| |||||||||| ||||||| |||||| ||||    
T  41153260 tactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaat 41153204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 44736816 - 44736892
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||| ||||| |||| || | |||||| | |||| |||| |||||||||||| |||| ||| |||||||||||    
T  44736816 tttagatatattgattaatttatgcatctagactagaatctaagccaaatacataatttatctaacgtatctaaaaa 44736892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 5e-47; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 69 - 222
Target Start/End: Complemental strand, 7405600 - 7405443
Alignment:
Q  69 tgtttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacata 168  Q
    |||||| |||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  7405600 tgtttaatactccctccggtcttatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacata 7405501  T
Q  169 aattatttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||||||||||||| ||||||   |||| ||||||| |||| ||||||||    
T  7405500 aattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccgaagggagta 7405443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 31971029 - 31971142
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31971029 tactccctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 31971128  T
Q  176 taatgtatctaaaa 189  Q
    ||||||||||||||    
T  31971129 taatgtatctaaaa 31971142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 24949630 - 24949780
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  24949630 tactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatt 24949729  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  24949730 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 24949780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 885601 - 885715
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  885601 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 885700  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  885701 taatgtatctaaaaa 885715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 92 - 222
Target Start/End: Original strand, 390820 - 390954
Alignment:
Q  92 atttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa- 190  Q
    |||||||||| |||||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  390820 atttataagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaag 390919  T
Q  191 taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||   |||| ||||||| |||||||||||||    
T  390920 taaattgtctcttgtaaataggaccggagggagta 390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 17225242 - 17225392
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||| ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  17225242 tactccctccggtcttatttacaagtgaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatatataaattatt 17225341  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| | |||||||||||    
T  17225342 taatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 17225392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 6047795 - 6047945
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| || |||||||| ||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  6047795 tactccctccggtcctatttacaacagaaagttaactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatt 6047894  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||  |||||||||||||    
T  6047895 taatgtatctaaaaagtaaattatctcttgtaaatatgaccggagggagta 6047945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 33859639 - 33859525
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||| ||| ||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  33859639 tactccctccggtcctatttacaagagaaagttaactttttagatacatcgaataatgtatgtatctagtcaagaaactaaaccaaatacataaattatt 33859540  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  33859539 taatgtatctaaaaa 33859525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 766441 - 766576
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct-aaaa 189  Q
    ||||||||||||||||| || | |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  766441 tatttataagagaaagtcgattttttagatacattgaataatgtatgtatttagtcaataacctaaaccaaatacataaattatttaatgtatctaaaaa 766540  T
Q  190 ataaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||   |||| ||||||| |||||||||||||    
T  766541 ataaattatctcttgtaaataggaccggagggagta 766576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 6045680 - 6045830
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||| || ||||| |||||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||    
T  6045680 tactctctccggtcctatttataagagaaagttgaccttttagatacattgaataatctatgtatctagtcaagaatctaaatcaaatacataaattatt 6045779  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||| |||||||||| ||||||   |||| ||||||| |||||||||||||    
T  6045780 taatctatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 6045830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 8558913 - 8559026
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| | ||| |||||| |||||||| |||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  8558913 tactccctccagtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaacctaaaccaaatacataaattatt 8559012  T
Q  176 taatgtatctaaaaa 190  Q
    | |||||||||||||    
T  8559013 t-atgtatctaaaaa 8559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 71 - 222
Target Start/End: Original strand, 13144203 - 13144358
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    |||| ||||||||||| || |||||| || | |||||||||| |||||||||||| ||| ||||| ||||| |||||||||||||||| |||||||||||    
T  13144203 tttagtactcccttcgatcctatttacaaaataaagttgactttttagatacattcaattatgtatgtatcaagtcaagaacctaaacaaaatacataaa 13144302  T
Q  171 ttatttaatgtatctaaaaa-taa---atttcttataaatagaaccggagggagta 222  Q
    |||||||||||||||||||| |||   || |||| ||||||||| |||||||||||    
T  13144303 ttatttaatgtatctaaaaagtaatctatctcttgtaaatagaatcggagggagta 13144358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 30686678 - 30686579
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| |||||||| |||||| |||| ||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  30686678 tatttacaagagaaaattgactttttaaatacattgaataatgtatgtatctagtcaaaaacctaaacgaaatacataaattatttaatgtatctaaaaa 30686579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 14931402 - 14931264
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| |||||||||||| |||||| | |||||| |||||||||||||||||||||| |||||     || ||||||||||||||||||||||||||    
T  14931402 tactccctccggtcatatttacaagagacaattgactttttagatacattgaataatgtatgtatc-----aaaaacctaaaccaaatacataaattatt 14931308  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccgga 215  Q
    ||||||||||||||| ||||||   |||||||||||| ||||||    
T  14931307 taatgtatctaaaaagtaaattgtctcttataaataggaccgga 14931264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 6801588 - 6801664
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6801588 tttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacatgaattatttaatgtatctaaaaa 6801664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 91 - 213
Target Start/End: Original strand, 34639054 - 34639180
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| |||||| |||||||| |||||||||||  ||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||    
T  34639054 tatttacaagagacagttgactttttagatacatgcaataatgtatgtatctagtcaagaacctaaaccaaatacataaatttttcaatgtatctaaaaa 34639153  T
Q  191 -taaatt---tcttataaatagaaccg 213  Q
     ||||||   |||||||||||| ||||    
T  34639154 gtaaattgtctcttataaataggaccg 34639180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 36353 - 36429
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||| |||||||||| ||  ||||||||||| || ||||||||||||||||||||||||||| ||||||||||    
T  36353 tttagatatattgaataatttatatatctagtcaaaaatctaaaccaaatacataaattatttaatatatctaaaaa 36429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 22898948 - 22898852
Alignment:
Q  130 aatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  22898948 aatgtatgtatatagtcaagaacctaaaccaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 22898852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 222
Target Start/End: Complemental strand, 22881012 - 22880917
Alignment:
Q  131 atgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||| |||| ||||||||||||||||| ||||| |||||||||| |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  22881012 atgtatgtatatagtcaagaacctaaactaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 22880917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 131
Target Start/End: Original strand, 862817 - 862872
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataa 131  Q
    |||||||| ||||||||||||||||  ||| |||||| ||||| ||||||||||||    
T  862817 tactccctccggtcatatttataagcaaaaattgactttttaggtacattgaataa 862872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 6047945 - 6047889
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| |||||||||||| |||||| | || ||| |||||||||||| ||||||    
T  6047945 tactccctccggtcatatttacaagagataatttactttttagatacattaaataat 6047889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 7405443 - 7405499
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||||||||| |||||| |||||| | || ||| |||||||||||| ||||||    
T  7405443 tactcccttcggtcctatttacaagagacaatttactttttagatacattaaataat 7405499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 82 - 222
Target Start/End: Complemental strand, 7750061 - 7749917
Alignment:
Q  82 cttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgt 181  Q
    |||||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  7750061 cttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatttaatgt 7749962  T
Q  182 atctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||| ||||||   |||| ||||||| |||||||||||||    
T  7749961 atctaaaaattaaattgtctcttgtaaataggaccggagggagta 7749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 903965 - 904115
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  903965 tactccctccggtcctatttacaagagaaagttgactttttagatatattgaataatgtgtgtatctagtcaagaacctaaaccaaatacataaattatt 904064  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   ||| || |||||||||||||||||||||    
T  904065 taatgtatctaaaaagtaaattgtttattgtaaatagaaccggagggagta 904115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 31802957 - 31803107
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  31802957 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatatatctagtcaataacctaaaccaaatacataaattatt 31803056  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| |||||||||||||    
T  31803057 taatgtatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 31803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 37699774 - 37699893
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    ||||||||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  37699774 tttattactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaa 37699873  T
Q  171 ttatttaatgtatctaaaaa 190  Q
    ||||| ||||||||||||||    
T  37699874 ttattcaatgtatctaaaaa 37699893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 41815334 - 41815220
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  41815334 tactcccttcggtcctatttacaagagaaagttgactttttagatacattgaataatgtacgtatttagtcaagaacctgaaccaaatacataaattatt 41815235  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||| ||||||    
T  41815234 taatgtatttaaaaa 41815220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 41989698 - 41989563
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41989698 tatttaaaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 41989599  T
Q  191 -taaatt---tcttataaatagaaccggagggagta 222  Q
     ||||||   |||| ||||||| |||||||| ||||    
T  41989598 gtaaattgtctcttgtaaataggaccggaggaagta 41989563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 13145029 - 13144879
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  13145029 tactccctccggtcctatttacaagagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 13144930  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  13144929 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 13144879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 36417046 - 36417196
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  36417046 tactccctccggtcctatttacaagagaaatttgactttttaaatacattgaataatgtatgtatctagtcaagaacctaatccaaatacataaattatt 36417145  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||||||||||| ||| |||||||||    
T  36417146 taatgtatctaaaaagtaaattgtttcttataaataggaccagagggagta 36417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 225
Target Start/End: Original strand, 9601592 - 9601745
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||| || |||||||||||||||||||||||    
T  9601592 tactccttccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccaaatacataaattatt 9601691  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagta 225  Q
    | ||||||||||||| ||||||   |||| ||||||| ||||||||||||||||    
T  9601692 tgatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtagta 9601745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 23411314 - 23411164
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  23411314 tactccctccggtcttatttacaagagaaaattgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatt 23411215  T
Q  176 taatgtatctaaaaataaatt----tcttataaatagaaccggagggagta 222  Q
    |||||||||||||||  ||||    |||||||||||  |||||||||||||    
T  23411214 taatgtatctaaaaagtaatttgtatcttataaatatgaccggagggagta 23411164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 25027843 - 25027693
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  25027843 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatacataaattatt 25027744  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  25027743 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 25027693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 6338329 - 6338428
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||| ||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  6338329 tatttataagaggaagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 6338428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 7053796 - 7053644
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||| ||||||| |||| ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||    
T  7053796 tactccctccggtcctatttacaagagaa-gttgactttttaaatacattgaataatgtatgtatctagtcaagagcctaaatcaaatacataaattatt 7053698  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagta 225  Q
    ||||||||||||||| ||||||   |||| ||||||| ||||||||||||||||    
T  7053697 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagtagta 7053644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 76 - 225
Target Start/End: Complemental strand, 26898340 - 26898187
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  26898340 tactccctccggtcctatttacaagagaaagttgactttttagatgcattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 26898241  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagta 225  Q
    |||||||| |||||| ||||||   |||| ||||||| || | |||||||||||    
T  26898240 taatgtatttaaaaagtaaattgtctcttgtaaataggactgaagggagtagta 26898187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 29374319 - 29374205
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  29374319 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctcgtcaagaacctaaaccaaatacataaattatt 29374220  T
Q  176 taatgtatctaaaaa 190  Q
     ||||||||||||||    
T  29374219 caatgtatctaaaaa 29374205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 196
Target Start/End: Complemental strand, 2825994 - 2825889
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| |||||||| |||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  2825994 tatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagttaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 2825895  T
Q  191 taaatt 196  Q
     |||||    
T  2825894 aaaatt 2825889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 91 - 190
Target Start/End: Complemental strand, 41046962 - 41046863
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||||||||| | ||||||||||||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41046962 tatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatgtatctaaaaa 41046863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 91 - 223
Target Start/End: Original strand, 18353222 - 18353358
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||| | |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18353222 tatttacaagagaaagttgattttttacatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaaaa 18353321  T
Q  191 -taaa---tttcttataaatagaaccggagggagtag 223  Q
     ||||   |||||| ||||||| | ||||||||||||    
T  18353322 gtaaattgtttcttgtaaataggatcggagggagtag 18353358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 15569345 - 15569480
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  15569345 tatttacaagagaaagttgactttttagatacattgaataatgtatatatctaatcaagaacataaaccaaatacataaattatttaatgtatctaaaaa 15569444  T
Q  191 -taaatt---tcttataaatagaaccggagggagta 222  Q
     ||||||   |||| ||||||| |||||||| ||||    
T  15569445 gtaaattgtctcttgtaaataggaccggaggaagta 15569480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 190
Target Start/End: Complemental strand, 1643498 - 1643379
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    |||| |||||||| ||||| ||||||||||||| |||||||| |||||||||||| ||||||||| ||||||||||||||| ||||| ||||||||||||    
T  1643498 tttaatactccctccggtcctatttataagagacagttgactttttagatacattcaataatgtatgtatctagtcaagaatctaaatcaaatacataaa 1643399  T
Q  171 ttatttaatgtatctaaaaa 190  Q
    || || ||||||||||||||    
T  1643398 tttttcaatgtatctaaaaa 1643379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 93 - 222
Target Start/End: Complemental strand, 7945969 - 7945836
Alignment:
Q  93 tttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa-t 191  Q
    |||| ||||||||| | ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |    
T  7945969 tttacaagagaaagatcactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatatataaattatttaatgtatctaaaaagt 7945870  T
Q  192 aaa---tttcttataaatagaaccggagggagta 222  Q
    |||   |||||| ||||||| |||||||||||||    
T  7945869 aaattgtttcttgtaaataggaccggagggagta 7945836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 20578669 - 20578768
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||||||||||| ||||||||||||||||||| ||  ||||||||||| |||||||||||||||||||||||||||||||||| ||||||    
T  20578669 tatttataagagaaagttgactttttagatacattgaataatatatctatctagtcaataacctaaaccaaatacataaattatttaatgtatataaaaa 20578768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 36418984 - 36419098
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||| |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  36418984 tactccctccggtcctatttacaagataaagttgatttttttgatacattgaataatgtatgtatctagtcaagaacctaaactaaatacataaattatt 36419083  T
Q  176 taatgtatctaaaaa 190  Q
    | |||||||||||||    
T  36419084 ttatgtatctaaaaa 36419098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 21090378 - 21090489
Alignment:
Q  79 tcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||| ||||| |||||| |||||||| || ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||    
T  21090378 tccctccggtcctatttacaagagaaaattaactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacatacattatttaa 21090477  T
Q  179 tgtatctaaaaa 190  Q
    ||||| ||||||    
T  21090478 tgtatttaaaaa 21090489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 21610315 - 21610450
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| |||| |||||| ||| ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  21610315 tatttacaagataaagttaactttttagatacattgaataatgtatatatttagtcaagaacctaaaccaaatacataaattatttaatgtatataaaaa 21610414  T
Q  191 --taa--atttcttataaatagaaccggagggagta 222  Q
      |||   |||||| ||||||| |||||||||||||    
T  21610415 gttaattgtttcttgtaaataggaccggagggagta 21610450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 2959240 - 2959393
Alignment:
Q  78 ctcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattattta 177  Q
    |||||| ||||| |||||| |||||||| |||||| ||||||||||||||| ||||||  ||||||||||||||  |||| |||||||||| ||||||||    
T  2959240 ctccctccggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatatatctagtcaagaatttaaatcaaatacatatattattta 2959339  T
Q  178 atgtatctaaaaa-taaa---tttcttataaatagaaccggagggagtagtaga 227  Q
    ||||||||||||| ||||   |||||| ||||||| |||||| |||||| ||||    
T  2959340 atgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtattaga 2959393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 78 - 227
Target Start/End: Original strand, 2967709 - 2967862
Alignment:
Q  78 ctcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattattta 177  Q
    |||||| ||||| |||||| |||||||| |||||| ||||||||||||||| ||||||  ||||||||||||||  |||| |||||||||| ||||||||    
T  2967709 ctccctccggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatatatctagtcaagaatttaaatcaaatacatatattattta 2967808  T
Q  178 atgtatctaaaaa-taaa---tttcttataaatagaaccggagggagtagtaga 227  Q
    ||||||||||||| ||||   |||||| ||||||| |||||| |||||| ||||    
T  2967809 atgtatctaaaaagtaaattgtttcttgtaaataggaccggatggagtattaga 2967862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 1108432 - 1108318
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| ||||||  ||| ||||||||   ||||||| |||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  1108432 tactccctccggtcctatttacgagataaagttgatcttttagatgcattgaataatgtatgtatctagtcaagaacctaaactaaatacataaattatt 1108333  T
Q  176 taatgtatctaaaaa 190  Q
    | |||||||||||||    
T  1108332 ttatgtatctaaaaa 1108318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 85 - 190
Target Start/End: Original strand, 42311818 - 42311923
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| |||| ||| |||||| |||| ||||||||||||||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||    
T  42311818 cggtcctatttacaagaaaaaattgactttttaaatacattgaataatgtatgtatttagtcaaaaacttaaaccaaatacataaattatttaatgtatc 42311917  T
Q  185 taaaaa 190  Q
    ||||||    
T  42311918 taaaaa 42311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 16089100 - 16089200
Alignment:
Q  91 tatttataagagaaagttgactcttt-agatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaa 189  Q
    ||||||||||| |||||||| | ||| || |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  16089100 tatttataagataaagttgatttttttaggtacattgaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatttaatatatctaaaa 16089199  T
Q  190 a 190  Q
    |    
T  16089200 a 16089200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 6910834 - 6910747
Alignment:
Q  103 aaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||| |||||||| ||||||||||||| | ||||||||||||| ||||| ||||||||||||||||||||||||||||||||    
T  6910834 aaagttgactttttagatatattgaataatgtatgcatctagtcaagaatctaaatcaaatacataaattatttaatgtatctaaaaa 6910747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 14338947 - 14338850
Alignment:
Q  93 tttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||| |||||||| || ||| ||||||||||||||||||| || ||||||| |||||||  |||||||||||||||||||||||||| ||||||||||    
T  14338947 tttacaagagaaatttaactttttagatacattgaataatttatgtatctattcaagaatttaaaccaaatacataaattatttaatttatctaaaaa 14338850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 222
Target Start/End: Original strand, 38393797 - 38393904
Alignment:
Q  119 atacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa-taaa---tttcttataaatagaaccgg 214  Q
    |||||||||||||| || |||| |||||||||| ||||| ||||| ||||||||||| ||| ||| |||||| | ||   |||||| |||||||||||||    
T  38393797 atacattgaataatttatgtatatagtcaagaatctaaatcaaattcataaattattcaatatatttaaaaagtcaattgtttcttgtaaatagaaccgg 38393896  T
Q  215 agggagta 222  Q
    ||| ||||    
T  38393897 aggaagta 38393904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 161 - 190
Target Start/End: Complemental strand, 7272270 - 7272241
Alignment:
Q  161 aatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||||||||||||||||||||    
T  7272270 aatacataaattatttaatgtatctaaaaa 7272241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 13789881 - 13789825
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||  ||||||||||| |||||||||| || |||| |||||||||||    
T  13789881 tactccctccggttctatttataagaaaaagttgacttttcagattcattgaataat 13789825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 38394427 - 38394483
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| || || ||||||||||| ||| |||||| ||||||| |||||||||||    
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcattgaataat 38394483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 492304 - 492454
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||||||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  492304 tactccctccggtcctatttataagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 492403  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| || ||||||||||    
T  492404 taatgtatctaaaaagtaaattgtttcttgtaaataggactggagggagta 492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 28989421 - 28989271
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28989421 tactccctccggtcttatttacaagagaaagttgacttattagatacattgaataatgtacgtatctagtcaagaatctaaaccaaatacataaattatt 28989322  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| |||| ||||||||    
T  28989321 taatgtatctaaaaagtaaattgtttcttgtaaataggaccgaagggagta 28989271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 222
Target Start/End: Original strand, 9301915 - 9302068
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||||||| ||||| |||||| |||||| |||| ||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  9301915 tattactccctccggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaatt 9302014  T
Q  173 atttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||||||||| ||||||   |||||||||||| |||||||| ||||    
T  9302015 atttaatgtatctaaaaagtaaattgtctcttataaataggaccggaggtagta 9302068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 28359070 - 28359184
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||||||||||||||||| | ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||    
T  28359070 tactcccttcggtcctatttataagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaaccaaaaccaaatacataaattatt 28359169  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  28359170 taatgtatctaaaaa 28359184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 2352458 - 2352308
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2352458 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 2352359  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||| |||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  2352358 taatatatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 2352308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 2961103 - 2961253
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  2961103 tactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatt 2961202  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| ||| |||||||||    
T  2961203 taatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 2961253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 73 - 222
Target Start/End: Complemental strand, 26545149 - 26544996
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||| ||| ||||| |||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  26545149 tattacttcctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaatt 26545050  T
Q  173 atttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||| ||||||||| ||||||   | ||||||||||||| || |||||||    
T  26545049 atttaatgaatctaaaaagtaaattgtattttataaatagaactggtgggagta 26544996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 70 - 190
Target Start/End: Complemental strand, 23398235 - 23398115
Alignment:
Q  70 gtttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataa 169  Q
    |||||||||||||| ||||| |||||| || ||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23398235 gtttattactccctccggtcctatttacaatagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataa 23398136  T
Q  170 attatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||    
T  23398135 attattcaatgtatctaaaaa 23398115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 29312588 - 29312438
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| || |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  29312588 tacttcctccggtcctatttacaacagaaagttgactttttaaatacattgaataatgtacgtatctagtcaagaacctaaatcaaatacataaattatt 29312489  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  29312488 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 29312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 79 - 190
Target Start/End: Original strand, 40161175 - 40161286
Alignment:
Q  79 tcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    |||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||    
T  40161175 tcccttcggtcatatttacaagagaaaattgactttttaaatacattgaataatgtatgtatccagtcaaaaacctaaaccaaatacataaattatttaa 40161274  T
Q  179 tgtatctaaaaa 190  Q
    ||||||||||||    
T  40161275 tgtatctaaaaa 40161286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 1673971 - 1674085
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| ||||||||||||||| | |||||||||| |||||| || |||| ||||||||||||||||||||||||||||||||||    
T  1673971 tactcccttcggtcctatttacaagagaaagttgactttctagatacattaaataatatatgtatttagtcaagaacctaaaccaaatacataaattatt 1674070  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  1674071 taatgtatctaaaaa 1674085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 86 - 222
Target Start/End: Complemental strand, 14281729 - 14281589
Alignment:
Q  86 ggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 185  Q
    |||| |||||| |||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14281729 ggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgtatct 14281630  T
Q  186 aaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||| ||||||   |||| ||||||| |||||||| ||||    
T  14281629 aaaaagtaaattgtctcttgtaaataggaccggaggtagta 14281589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 26550301 - 26550436
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||    
T  26550301 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagttaagaacctaaagcaaatacataaattatttaatgtttctaaaaa 26550400  T
Q  191 -taaatt---tcttataaatagaaccggagggagta 222  Q
     ||||||   |||||||||||  |||||||||||||    
T  26550401 gtaaattgtctcttataaatatgaccggagggagta 26550436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 10380389 - 10380539
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||| |||||||| |||||| |||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  10380389 tacttcctccggtcctatttacaagagaaaattgactttttagatacattcaataatgtatgtatctagtcatgaacctaaaccaaatacataaattatt 10380488  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| ||| |||||||||    
T  10380489 taatgtatctaaaaagtaaattgtctcttgtaaataggaccagagggagta 10380539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 38830632 - 38830482
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||| |||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  38830632 tactccctccggtcctatttacaagagacagttgactttttaaatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatt 38830533  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  38830532 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 38830482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 10065254 - 10065368
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||| | |||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||    
T  10065254 tactccctccggtcctatttacaagagaaaattgattttttagatacattgaataatgtatgtatctcgtcaagaacctaaatcaaatacataaattatt 10065353  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  10065354 taatgtatctaaaaa 10065368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 15289913 - 15289808
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  15289913 cggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtacctagtcaataacctaaaccaaatatataaattatttaatgtatc 15289814  T
Q  185 taaaaa 190  Q
    ||||||    
T  15289813 taaaaa 15289808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 9548821 - 9548671
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| ||||||||||||||| |||||  ||||||| ||||||||||||| |||||||||||||||||    
T  9548821 tactccctccggtcctatttacaagagaaaattgactttttagatacattgaagaatgtgtgtatctaatcaagaacctaaatcaaatacataaattatt 9548722  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||   |||||| ||||||| |||||||| ||||    
T  9548721 taatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggaagta 9548671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 7796084 - 7796203
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    |||| |||||||| ||||| |||||| |||||||| | | || |||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||    
T  7796084 tttactactccctccggtcctatttacaagagaaaatagtctttttagatacattgaataatgtatgtatttagtcaagaatctaaaccaaatacataaa 7796183  T
Q  171 ttatttaatgtatctaaaaa 190  Q
    ||||||||||||||||||||    
T  7796184 ttatttaatgtatctaaaaa 7796203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 75 - 220
Target Start/End: Original strand, 45536161 - 45536310
Alignment:
Q  75 ttactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattat 174  Q
    ||||||||| ||||  |||||| |||||||| |||||| |||||||||||| |||||||||  |||| ||||||||||||||||||||||||||||||||    
T  45536161 ttactccctccggttttatttacaagagaaaattgactttttagatacattcaataatgtatttatcaagtcaagaacctaaaccaaatacataaattat 45536260  T
Q  175 ttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggag 220  Q
    || ||||||||||||| ||||||   |||| ||||||| |||||||||||    
T  45536261 ttgatgtatctaaaaagtaaattatctcttgtaaataggaccggagggag 45536310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 6784808 - 6784694
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||||||||| ||||||||| |||||||||| | |||||||||||||||||||||| ||||||| |||||||||| || |||||| ||||||||||    
T  6784808 tacttccttcggtcctatttataatagaaagttgattttttagatacattgaataatgtatgtatctaatcaagaacctgaatcaaatatataaattatt 6784709  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  6784708 taatgtatctaaaaa 6784694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 33325473 - 33325368
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||| || |||||||| |||||||||||||||||||||||    
T  33325473 cggtcctatttacaagaaaaagttgactttttagatacattgaataatgtatgtatctagtcaaaaatctaaaccagatacataaattatttaatgtatc 33325374  T
Q  185 taaaaa 190  Q
    ||||||    
T  33325373 taaaaa 33325368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 24594933 - 24595031
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||| | |||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24594933 tatttataaaataaagttgactttttagat-cattgaattatgtatgtatctagtcaagaacctaaaccaaatatataaattatttaatgtatctaaaaa 24595031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 26733934 - 26733820
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||| |||||||| |||||||||||||||||||||| | |||||| | | |||||| || |||||||||||||||  ||||||||||||||| ||||||    
T  26733934 tactctcttcggtcctatttataagagaaagttgactttatagataaaataaataatttatgtatctagtcaagaatataaaccaaatacatagattatt 26733835  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  26733834 taatgtatctaaaaa 26733820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 74 - 222
Target Start/End: Complemental strand, 34719035 - 34718890
Alignment:
Q  74 attactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatta 173  Q
    |||||||||| ||||| |||||| || |||||||| ||| ||||||||       |||||||||||||||||||| || |||||||||||||||||||||    
T  34719035 attactccctccggtcctatttacaaaagaaagttaactttttagata-------taatgtacgtatctagtcaaaaatctaaaccaaatacataaatta 34718943  T
Q  174 tttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  34718942 tttaatgtatctaaaaattaaattgtctcttgtaaataggaccggagggagta 34718890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 30264773 - 30264887
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || ||||||  |||||||||||| |  || ||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||    
T  30264773 tactccctccgatcctatttacgagagaaagttgatttgttggatacattgaataatatatgtatctagtcaagaacctaaaccaaatatataaattatt 30264872  T
Q  176 taatgtatctaaaaa 190  Q
    |||| ||||||||||    
T  30264873 taatatatctaaaaa 30264887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 76 - 196
Target Start/End: Complemental strand, 24463438 - 24463318
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||||||||||||||||||| || | |||||||| | |||| || |||| ||||||||| |||| |  |||||||| ||||||||||| ||||||||||    
T  24463438 tactcccttcggtcatatttacaataaaaagttgattttttaaattcattcaataatgtatgtatttgatcaagaacataaaccaaatatataaattatt 24463339  T
Q  176 taatgtatctaaaaataaatt 196  Q
    |||| ||||||||||||||||    
T  24463338 taatatatctaaaaataaatt 24463318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 46320156 - 46320262
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || |||||||||||||| ||||||| |||||||   ||||||||| || ||||||||||||     ||||||||||||||||||||||    
T  46320156 tactccctccgatcttatttataagagaaggttgactttttagat---ttgaataatatatgtatctagtcaa-----taaaccaaatacataaattatt 46320247  T
Q  176 taatgtatctaaaaa 190  Q
    | |||||||||||||    
T  46320248 tgatgtatctaaaaa 46320262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 23537386 - 23537434
Alignment:
Q  142 tagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  23537386 tagtcaagaacctaaaccaaatacataaattatttaatttatctaaaaa 23537434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 76 - 167
Target Start/End: Complemental strand, 44939215 - 44939124
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacat 167  Q
    |||| |||||| |||||||||||||||||| |||| | ||||||| |||||| ||||  | ||||||| || ||||  || |||||||||||    
T  44939215 tacttccttcgatcatatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacat 44939124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 132
Target Start/End: Complemental strand, 29256749 - 29256691
Alignment:
Q  74 attactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||| ||| ||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  29256749 attacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 29256691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 5368919 - 5368863
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||||||||||||||  ||| || ||| ||||||| |||||||||||    
T  5368919 tactccctccggtcatatttataagcaaaaattaactttttagatgcattgaataat 5368863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 26550436 - 26550380
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||||||||||||||||| | || ||| |||||| ||||| ||||||    
T  26550436 tactccctccggtcatatttataagagacaatttactttttagaaacattaaataat 26550380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 50155447 - 50155391
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||| ||| ||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  50155447 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 50155391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 5e-44; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 78 - 222
Target Start/End: Original strand, 19202251 - 19202399
Alignment:
Q  78 ctcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattattta 177  Q
    |||||| ||||| |||||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  19202251 ctccctccggtcctatttacaagagaaagttgactttttagatacattgaataaggtatgtatctagtcaagaacctaaaccaaatacataaattattta 19202350  T
Q  178 atgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||||||||||| ||||   ||| || ||||||| |||||||||||||    
T  19202351 atgtatctaaaaagtaaattgttttttgtaaataggaccggagggagta 19202399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 14768244 - 14768097
Alignment:
Q  79 tcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||| ||||| |||||| ||||||||||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  14768244 tccctccggtcctatttacaagagaaagttgattttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatttaa 14768145  T
Q  179 tgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  14768144 tgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 14768097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 26999170 - 26999020
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  26999170 tactccctccggtcctatttacaagagacatttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 26999071  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  26999070 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 26999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 29019884 - 29019734
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||| ||| |||||| |||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||    
T  29019884 tactcccttcagtcctatttacaagagaaaattgactttttagatacattgaataatatatgtatctagtcaagaacctaaaccaaatacataaattatt 29019785  T
Q  176 taatgtatctaaaa-ataaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||  ||||||   |||| ||||||| |||||||||||||    
T  29019784 taatgtatctaaaatgtaaattgtctcttgtaaataggaccggagggagta 29019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 40214899 - 40215049
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||    
T  40214899 tactccctccggtcctatttacaagagaaagttgactttttagatacattggataatgtatgtatctagtcaagaatctaaatcaaatacataaattatt 40214998  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||| ||   |||||||||||| |||||||||||||    
T  40214999 taatgtatctaaaaagtaacttgtctcttataaataggaccggagggagta 40215049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 91 - 190
Target Start/End: Original strand, 335389 - 335488
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  335389 tatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 335488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 6086900 - 6087045
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6086900 tactccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 6086999  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagg 217  Q
     |||||||||||||| ||||||   |||| ||||||| ||||||||    
T  6087000 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 6087045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 9190177 - 9190063
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||    
T  9190177 tactcccttcgatcctatttataagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatttaaaccaaatacataaattatt 9190078  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||| ||||    
T  9190077 taatgtatcttaaaa 9190063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 23825298 - 23825184
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || ||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  23825298 tactccctccgatcatatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattatt 23825199  T
Q  176 taatgtatctaaaaa 190  Q
    | |||||||||||||    
T  23825198 tgatgtatctaaaaa 23825184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 220
Target Start/End: Original strand, 25113348 - 25113496
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| ||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| || |||||||||||||||||||||||||||||||    
T  25113348 tacttcctccggtcctatttataagagaaagttgactttttagatacattgaataatgtatgtatttaatcaagaacctaaaccaaatacataaattatt 25113447  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggag 220  Q
    ||||||||| ||||| ||||||   |||| ||||||| |||||||||||    
T  25113448 taatgtatcgaaaaagtaaattgtctcttgtaaataggaccggagggag 25113496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 76 - 227
Target Start/End: Complemental strand, 10049817 - 10049662
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| | |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  10049817 tactccctccggtcctatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 10049718  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagtaga 227  Q
     |||||||||||||| ||||||   |||| ||||||| |||||||| |||| ||||    
T  10049717 caatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtattaga 10049662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 9465070 - 9465220
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||| || ||||| |||||| |||| |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  9465070 tactctctccggtcctatttacaagataaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaatcaaatacataaattatt 9465169  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    | ||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  9465170 ttatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9465220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 18765257 - 18765407
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||| ||| |||||||||||| ||||||||||||| | |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  18765257 tacttcctccggtcatatttacaagagaaagttgattttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattatt 18765356  T
Q  176 taatgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    ||||| ||||||||| ||||   |||||| ||||||| |||||| ||||||    
T  18765357 taatgcatctaaaaagtaaattgtttcttgtaaataggaccggaaggagta 18765407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 40464671 - 40464557
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| ||||||||||| |||||||| | |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40464671 tactccctccggtcctatttataagataaagttgattttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 40464572  T
Q  176 taatgtatctaaaaa 190  Q
    |||| ||||||||||    
T  40464571 taatttatctaaaaa 40464557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 49123093 - 49122945
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||||||  |||| |||||||| || ||| |||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  49123093 tactccctagggtcctatttataggataaatttgactttttagatacattgaataatgtatgtatctagtcaagagcctaaaccaaatacataaattatt 49122994  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggag 220  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||    
T  49122993 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggag 49122945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 79 - 222
Target Start/End: Original strand, 9440130 - 9440277
Alignment:
Q  79 tcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||| ||||| |||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||    
T  9440130 tccctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattattcaa 9440229  T
Q  179 tgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||||||||| ||||||   |||| ||||||| |||||||| ||||    
T  9440230 tgtatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 9440277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 73 - 190
Target Start/End: Original strand, 21653340 - 21653457
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||||||| ||||| |||||| |||||||| |||| | ||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||    
T  21653340 tattactccctccggtcctatttacaagagaaatttgattttttagatacattgaataatgtatatatctagtcaagaacctaaaccaaatgcataaatt 21653439  T
Q  173 atttaatgtatctaaaaa 190  Q
    ||||||||||||||||||    
T  21653440 atttaatgtatctaaaaa 21653457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 77 - 190
Target Start/End: Original strand, 25846511 - 25846624
Alignment:
Q  77 actcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattattt 176  Q
    ||||||| ||||| ||||||||| ||| |||||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25846511 actccctccggtcctatttataaaagacagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattt 25846610  T
Q  177 aatgtatctaaaaa 190  Q
    ||||||| ||||||    
T  25846611 aatgtatttaaaaa 25846624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 28945805 - 28945655
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||||||| ||| ||||||||| || |||||| |||||||||||||||||||||||||||||    
T  28945805 tactccctccggtcctatttacaagagaaaattgactttttagatatattcaataatgtatgtttctagttaagaacctaaaccaaatacataaattatt 28945706  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  28945705 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 28945655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 47450065 - 47449915
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||| | ||||| |||||| || |||||||||| | |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47450065 tactccttccggtcctatttacaatagaaagttgagtttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 47449966  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| | |||||||||||    
T  47449965 taatgtatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 47449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 76 - 224
Target Start/End: Complemental strand, 379222 - 379067
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaac---ctaaaccaaatacataaatt 172  Q
    |||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||| |   ||||||||||||||||||||    
T  379222 tactccttccggtcctatttataagagaaagttgactttttagatacattgaataatttatgtatctagtcaagatcaatctaaaccaaatacataaatt 379123  T
Q  173 atttaatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagtagt 224  Q
    |||||||||||||||||| | ||||   |||| ||||||| |||||||||||||||    
T  379122 atttaatgtatctaaaaaattaattgtctcttgtaaataggaccggagggagtagt 379067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 28564935 - 28565084
Alignment:
Q  77 actcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattattt 176  Q
    ||||||| ||||| |||||| |||||||| |||||| |||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  28564935 actccctccggtcctatttacaagagaaaattgactttttatatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattattt 28565034  T
Q  177 aatgtatct-aaaaataaatt---tcttataaatagaaccggagggagta 222  Q
    |||| |||| |||||||||||   |||| ||||||| |||| ||||||||    
T  28565035 aatgcatctaaaaaataaattgtctcttgtaaataggaccgaagggagta 28565084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 1122424 - 1122310
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||| |||||||| |||||| |||||||| |||||| ||||||||||||||| |||||| |||||||||||||||||||||  ||||||||||||||||    
T  1122424 tactcacttcggtcctatttacaagagaaaattgactttttagatacattgaagaatgtatgtatctagtcaagaacctaaaataaatacataaattatt 1122325  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  1122324 taatgtatctaaaaa 1122310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 76 - 190
Target Start/End: Original strand, 51698113 - 51698227
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| |||||||||||| ||||||||| ||||||||| | |||| ||||||||||||||||||||||    
T  51698113 tactccctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagtaatgaacataaaccaaatacataaattatt 51698212  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  51698213 taatgtatctaaaaa 51698227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 98 - 190
Target Start/End: Original strand, 52114045 - 52114137
Alignment:
Q  98 aagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||||||||| | |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  52114045 aagagaaagttgattttttagatacattgaataatgtatgtatctagtaaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 52114137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 8243690 - 8243831
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 184  Q
    ||||| |||||| |||||| | |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  8243690 cggtcttatttacaagagacaattgactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatacataaattattcaatgtatc 8243789  T
Q  185 taaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    |||||| ||||||   |||| ||||||| |||||||| ||||    
T  8243790 taaaaagtaaattgtctcttgtaaataggaccggaggtagta 8243831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 76 - 191
Target Start/End: Original strand, 44593200 - 44593315
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||||||||| |||||| |||| |||||||||| |||| |||||||||||||| || ||||||| |||| ||| ||||||||||||||||||||||    
T  44593200 tactcccttcggtcttatttacaagaaaaagttgactttttaaatacattgaataatatatgtatctaatcaaaaacttaaaccaaatacataaattatt 44593299  T
Q  176 taatgtatctaaaaat 191  Q
    ||||||||||||||||    
T  44593300 taatgtatctaaaaat 44593315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 76 - 222
Target Start/End: Original strand, 42605826 - 42605976
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| | ||| |||||| |||| |||||||| | |||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||||||    
T  42605826 tactccctccagtcctatttacaagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacttaaactaaatacataaattatt 42605925  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    | ||||||||||||| ||||||   |||| ||| ||| |||||||||||||    
T  42605926 ttatgtatctaaaaagtaaattgtctcttgtaagtaggaccggagggagta 42605976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 190
Target Start/End: Original strand, 42225556 - 42225675
Alignment:
Q  71 tttattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaa 170  Q
    ||||||||||||| |||||  ||||| |||| ||| || | | |||||||||||||||||||||| |||||||||||| ||||||||| |||||||||||    
T  42225556 tttattactccctccggtcccatttacaagaaaaaattaattttttagatacattgaataatgtatgtatctagtcaataacctaaactaaatacataaa 42225655  T
Q  171 ttatttaatgtatctaaaaa 190  Q
    |||||||||||||| |||||    
T  42225656 ttatttaatgtatcaaaaaa 42225675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 222
Target Start/End: Complemental strand, 13826246 - 13826111
Alignment:
Q  91 tatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||| |||| |||||||||||||||| ||||| ||||||||||||||||||  ||||||    
T  13826246 tatttacaagagaaagttgactttttagatacattgaagaatgtatgtatttagtcaagaacctaaatcaaattcataaattatttaatgtaaataaaaa 13826147  T
Q  191 -taaa---tttcttataaatagaaccggagggagta 222  Q
     ||||   |||||| ||||||| |||||| ||||||    
T  13826146 gtaaatcgtttcttgtaaataggaccggaaggagta 13826111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 22003948 - 22003831
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||| ||| ||||| ||||||||| ||||| |||||| ||||||||||||||||||| || ||||||||| ||||| |||||| ||||| |||||||    
T  22003948 tattacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatt 22003849  T
Q  173 atttaatgtatctaaaaa 190  Q
    ||| ||||||||||||||    
T  22003848 attcaatgtatctaaaaa 22003831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 73 - 190
Target Start/End: Complemental strand, 22011465 - 22011348
Alignment:
Q  73 tattactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    ||||||| ||| ||||| ||||||||| ||||| |||||| ||||||||||||||||||| || ||||||||| ||||| |||||| ||||| |||||||    
T  22011465 tattacttcctccggtcctatttataacagaaaattgactttttagatacattgaataatttatgtatctagtaaagaatctaaactaaatatataaatt 22011366  T
Q  173 atttaatgtatctaaaaa 190  Q
    ||| ||||||||||||||    
T  22011365 attcaatgtatctaaaaa 22011348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 76 - 169
Target Start/End: Complemental strand, 26123139 - 26123046
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataa 169  Q
    |||||||| ||||| |||||| ||||||||| ||||| |||||||||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  26123139 tactccctccggtcctatttacaagagaaagatgactttttagatacattgaataatgtatgtatctagtcaaaaacctaaaccaaatgcataa 26123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 8825848 - 8825766
Alignment:
Q  108 tgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||| ||||||| ||||||||||| || |||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  8825848 tgactttttagatgcattgaataatatatgtatctagtcaagaacttaaaccaaatacataaattatttaatatatctaaaaa 8825766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 39341371 - 39341487
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattg---aataatgtacgtatctagtcaagaacctaaaccaaatacataaatt 172  Q
    |||||||| ||||| |||||| |||||||| |||||| ||||||||||||    ||||||||| ||||||||||||||| ||||| |||||| |||||||    
T  39341371 tactccctccggtcctatttacaagagaaaattgactttttagatacattattaaataatgtatgtatctagtcaagaatctaaatcaaatatataaatt 39341470  T
Q  173 atttaatgtatctaaaa 189  Q
    ||||||| |||||||||    
T  39341471 atttaatatatctaaaa 39341487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 93 - 190
Target Start/End: Complemental strand, 3484460 - 3484367
Alignment:
Q  93 tttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||| |||||||||| | |||||||| |||||||||| ||||||     ||||||| |||||||||||||||||| |||||||||||||||||||    
T  3484460 tttataaaagaaagttgattttttagatatattgaataatttacgtac----tcaagaatctaaaccaaatacataaactatttaatgtatctaaaaa 3484367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 178
Target Start/End: Original strand, 42841636 - 42841700
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||||||||||||||||||||  |||||||| ||||| |||||| |||||||||||||||||||    
T  42841636 tttagatacattgaataatgtatatatctagttaagaatctaaactaaatacataaattatttaa 42841700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 137 - 190
Target Start/End: Original strand, 40141934 - 40141987
Alignment:
Q  137 gtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  40141934 gtatttagtcaagaatttaaaccaaatacataaattatttaatgtatctaaaaa 40141987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 55139284 - 55139208
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    |||||||| |||||||||| || |||| | ||||||||  |||| ||||||||||||||||| ||||||||||||||    
T  55139284 tttagatatattgaataatttatgtatttggtcaagaatttaaaacaaatacataaattattcaatgtatctaaaaa 55139208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 16660334 - 16660395
Alignment:
Q  131 atgtacgtatctagtcaagaacctaaaccaaatacataaa--ttatttaatgtatctaaaaa 190  Q
    ||||| |||| ||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  16660334 atgtatgtatttagtcaacaacctaaaccaaatacataaattttatttaatgtatctaaaaa 16660395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 114 - 190
Target Start/End: Original strand, 8987766 - 8987842
Alignment:
Q  114 tttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||||| ||||||||||  || |||| | ||| ||||  |||||||||||||||||||||| ||||||||||||||    
T  8987766 tttagatgcattgaataacttatgtatttggtctagaatttaaaccaaatacataaattattgaatgtatctaaaaa 8987842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 48593173 - 48593255
Alignment:
Q  108 tgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 190  Q
    ||||| |||||||||||||||||||  | |||||  ||| ||||  || ||||||||||||||||||| |||| |||||||||    
T  48593173 tgactttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaa 48593255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Original strand, 21662885 - 21662941
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| |||||||||| ||||||| |||||| ||||    
T  21662885 tactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaat 21662941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 132
Target Start/End: Complemental strand, 53442056 - 53442000
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataat 132  Q
    |||||||| ||||| ||||||||||| |||||||||| |||| || |||||||||||    
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataat 53442000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 160 - 189
Target Start/End: Complemental strand, 19880917 - 19880888
Alignment:
Q  160 aaatacataaattatttaatgtatctaaaa 189  Q
    ||||||||||||||||||||||||||||||    
T  19880917 aaatacataaattatttaatgtatctaaaa 19880888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 76 - 120
Target Start/End: Original strand, 51516957 - 51517001
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagat 120  Q
    |||||||| ||||| ||||||||||| |||||||||| |||||||    
T  51516957 tactccctccggtcctatttataagaaaaagttgactttttagat 51517001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 592 - 478
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  592 tactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacctaaacgaaatacataaattatt 493  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  492 taatgtatctaaaaa 478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 15303 - 15190
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    ||||| |||||||| |||||| ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15303 tactctcttcggtcctatttacaagagaaagttaactttttagatacattgaataatgtacgtat-tagtcaagaacctaaaccaaatacataaattatt 15205  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  15204 taatgtatctaaaaa 15190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 85; Significance: 2e-40; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 11179 - 11029
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| ||||||||||||||| ||||||||||||||||||| || ||||||| |||||||| ||||||||||||||||||||||    
T  11179 tactccctccggtcctatttacaagagaaagttgactttttagatacattgaataatatatgtatctaatcaagaacttaaaccaaatacataaattatt 11080  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| |||| || |||||||||||||    
T  11079 taatgtatctaaaaagtaaattgtctcttgtaaaaaggaccggagggagta 11029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 38974 - 38860
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||| |||||||  |||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  38974 tactccctccggtcctatttacaagagacagttgacattttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatt 38875  T
Q  176 taatgtatctaaaaa 190  Q
    |||||||||||||||    
T  38874 taatgtatctaaaaa 38860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 76 - 222
Target Start/End: Complemental strand, 36103 - 35953
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| ||||| |||||| |||||||| |||||| ||||||| |||| ||||||| | ||||||||| |||||||||||| ||||||||||||||||    
T  36103 tactccctccggtcctatttacaagagaaaattgactttttagatgcattcaataatgcatgtatctagttaagaacctaaacaaaatacataaattatt 36004  T
Q  176 taatgtatctaaaaa-taaatt---tcttataaatagaaccggagggagta 222  Q
    ||||||||||||||| ||||||   |||| ||||||| |||||||||||||    
T  36003 taatgtatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 35953  T

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Target: scaffold0592 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 76 - 190
Target Start/End: Complemental strand, 528 - 414
Alignment:
Q  76 tactcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatt 175  Q
    |||||||| || || |||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||    
T  528 tactccctccgatcctatttacaagagaaggttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccatatatataaattatt 429  T
Q  176 taatgtatctaaaaa 190  Q
    |||| ||||||||||    
T  428 taatatatctaaaaa 414  T

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Target: scaffold0009 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 85 - 174
Target Start/End: Original strand, 3639 - 3728
Alignment:
Q  85 cggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattat 174  Q
    ||||| ||||||||| |||||||||||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  3639 cggtcctatttataaaagaaagttgactttttagatacattgaataatgtatgtatttagtcaagaacctaaaccaaatacataaattat 3728  T

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Target: scaffold0067 (Bit Score: 62; Significance: 9e-27; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 79 - 222
Target Start/End: Complemental strand, 5362 - 5215
Alignment:
Q  79 tcccttcggtcatatttataagagaaagttgactctttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaa 178  Q
    ||||||||||  |||||| |||||||| || ||| |||||||| |||||||||| || |||| ||||||||||||||||||||||| |||||||||||||    
T  5362 tcccttcggttctatttacaagagaaaattaactttttagataaattgaataatatatgtatttagtcaagaacctaaaccaaatatataaattatttaa 5263  T
Q  179 tgtatctaaaaa-taaa---tttcttataaatagaaccggagggagta 222  Q
    | |||  ||||| ||||   |||||| |||||||||| ||||||||||    
T  5262 tatattaaaaaagtaaattgtttcttgtaaatagaactggagggagta 5215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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