View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3582_high_10 (Length: 568)
Name: NF3582_high_10
Description: NF3582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3582_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 365; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 365; E-Value: 0
Query Start/End: Original strand, 17 - 456
Target Start/End: Complemental strand, 21163359 - 21162922
Alignment:
| Q |
17 |
ataaaataatattgtaaaatataagggacaaagagcattttctttgccttttatccaccactaccaaagggtaaaatgtaatatcaccactatttcgtgg |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
21163359 |
ataaaataatattgtaaaatataagggacaaagagcattttctttgccttttatccaccactaccaaagggtaaaatgtaatatcaccactatttcgggg |
21163260 |
T |
|
| Q |
117 |
aaaactctttgatgcacgtttatgatatggacacaacaacaatctcaagttcatctatgaagtttatttnnnnnnnnnnnnttaatggaagaattaattt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||||||||||| |
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| T |
21163259 |
aaaactctttgatgcacgtttatgatatggacacaacaacaatctcaagttcctctatgaagtttatttaaaaaagaaaaattaatagaagaattaattt |
21163160 |
T |
|
| Q |
217 |
tgacttatggaaaatgtaagtgaaggatgtgttggtagaattaagattacaccagggtttgattaatgcatgagcattgattaggatttgtttaaggtgt |
316 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | |
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| T |
21163159 |
tgacttatggaaaatgtaagtgaagaatgtgttggtagaattaagattacaccagggtttgattaaggcatgagcattgattaggatttgtttaaggttt |
21163060 |
T |
|
| Q |
317 |
gtagtgagatcatattgatggttgaaaaactttctggaaacattaaagttgcataataagattttagcttgattttcgacatatggaaattcttataggg |
416 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
21163059 |
gtagtgagatcatattgatggttgaaaaactttctgcaaacattaaagttgcataataagattttagcttgattttcgacatatggaaattct--taggg |
21162962 |
T |
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| Q |
417 |
tgttttagcttgattttagctgtgattcttttgaactata |
456 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |
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| T |
21162961 |
tgttttagcttgattttagctgtgattcttttgaactata |
21162922 |
T |
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