View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3582_high_129 (Length: 227)
Name: NF3582_high_129
Description: NF3582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3582_high_129 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 6 - 227
Target Start/End: Complemental strand, 26971318 - 26971089
Alignment:
| Q |
6 |
actggtagcttataaacatttttcaacactataatttaggaaactcgtatgaaagtctacttattctattttggaaacatcttcaagcacttataattag |
105 |
Q |
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| T |
26971318 |
actggtagcttataaacatttttcaacactataatttaggaaactcgtatgaaagtctacttattctatttttgaaacatcttcaagcacttataattag |
26971219 |
T |
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| Q |
106 |
agaagtattagaatgactgtactgtattcaagctttttgatttaaggttaatagtattctgtacttcattatatccctcttcaaataattttttgacaga |
205 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||| |
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| T |
26971218 |
agaagtattagaatgactgtactgtattcaagctttttgatttaatgttaatagtattctgtacttcattatatccctcttcaaataactttttgccaga |
26971119 |
T |
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| Q |
206 |
--------agtacattagtttttatagtat |
227 |
Q |
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|||||||||||||||||||||| |
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| T |
26971118 |
caaatattagtacattagtttttatagtat |
26971089 |
T |
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