View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3582_high_138 (Length: 216)

Name: NF3582_high_138
Description: NF3582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3582_high_138
NF3582_high_138
[»] chr6 (3 HSPs)
chr6 (1-199)||(32313428-32313626)
chr6 (87-164)||(32299373-32299450)
chr6 (25-108)||(9107299-9107381)
[»] chr4 (6 HSPs)
chr4 (33-108)||(53381530-53381605)
chr4 (30-108)||(3144587-3144664)
chr4 (36-109)||(35157924-35157996)
chr4 (3-108)||(22234819-22234923)
chr4 (30-108)||(24343554-24343632)
chr4 (36-108)||(10133756-10133828)
[»] chr2 (3 HSPs)
chr2 (36-109)||(18840952-18841024)
chr2 (58-108)||(18622671-18622721)
chr2 (30-108)||(37419796-37419873)
[»] chr1 (4 HSPs)
chr1 (3-108)||(9828070-9828174)
chr1 (30-108)||(32899932-32900010)
chr1 (37-78)||(24176325-24176366)
chr1 (25-109)||(47989545-47989628)
[»] chr8 (4 HSPs)
chr8 (25-108)||(29510233-29510315)
chr8 (36-108)||(14513108-14513180)
chr8 (25-108)||(22652024-22652106)
chr8 (17-76)||(29447484-29447542)
[»] chr3 (4 HSPs)
chr3 (1-107)||(37077382-37077488)
chr3 (36-108)||(52369834-52369906)
chr3 (66-108)||(49651716-49651758)
chr3 (8-109)||(8039763-8039863)
[»] chr7 (4 HSPs)
chr7 (36-108)||(598256-598327)
chr7 (60-109)||(6490787-6490836)
chr7 (59-107)||(7197238-7197286)
chr7 (36-108)||(21880200-21880271)
[»] scaffold0652 (1 HSPs)
scaffold0652 (36-107)||(403-473)
[»] scaffold0003 (1 HSPs)
scaffold0003 (25-108)||(241642-241724)
[»] chr5 (4 HSPs)
chr5 (60-108)||(14873593-14873641)
chr5 (48-108)||(17393305-17393365)
chr5 (60-108)||(17593663-17593711)
chr5 (36-108)||(43564929-43565000)


Alignment Details
Target: chr6 (Bit Score: 191; Significance: 1e-104; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 32313428 - 32313626
Alignment:
Q  1 taacatgattcaatgcaattttatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtg 100  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32313428 taacatgattcaatgcaattatatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtg 32313527  T
Q  101 cttcatagtatgccgtagacattttcgacgagacaagcctactggatacaaaagttgctgatacgcttacaggtccaaagattaagtttgtgacatatt 199  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32313528 cttcatagtatgccgtagacattttcgacaagacaagcctactggatacaaaagttgctgatacgcttacaggtccaaagattaagtttgtgacatatt 32313626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 87 - 164
Target Start/End: Original strand, 32299373 - 32299450
Alignment:
Q  87 gagaaatgtccgtgcttcatagtatgccgtagacattttcgacgagacaagcctactggatacaaaagttgctgatac 164  Q
    |||||||||| |||||||||| ||| ||  || |||||||||||| ||||| |||||| || ||||||||||||||||    
T  32299373 gagaaatgtctgtgcttcatactataccacaggcattttcgacgaaacaagtctactgaatgcaaaagttgctgatac 32299450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 9107381 - 9107299
Alignment:
Q  25 gtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||| ||||||||||||||||| |||||  |||| ||||| |||||||||||||| ||| ||||| | || |||||||||||||    
T  9107381 gtgtcggtgtcgtgtcggtgtcggacaca-acgtgtgtccgacaccgggacacacctaatccgaggagtgcccgtgcttcatag 9107299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 108
Target Start/End: Complemental strand, 53381605 - 53381530
Alignment:
Q  33 gtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||||||||||||| ||||||||||  | ||| |||||||||||||| ||| ||||| | ||||||||||||||||    
T  53381605 gtcgtgtcggtgtcggacactgacgcgtatccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 53381530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 30 - 108
Target Start/End: Complemental strand, 3144664 - 3144587
Alignment:
Q  30 ggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||||||||||||||||||||||  |||  |||||||||| | ||||||| ||| ||||||| ||||||||||||||||    
T  3144664 ggtgtcgtgtcggtgtcagacaccaacgcgtgtccaacac-gagacacacctaatccgagaagtgtccgtgcttcatag 3144587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 35157996 - 35157924
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatagt 109  Q
    ||||||||||| ||||| |||  |||||||||||||| |||| ||||| ||||||| |||||||||||||||||    
T  35157996 gtgtcggtgtctgacac-gacacatgtccaacaccggaacacgcttaatccgagaagtgtccgtgcttcatagt 35157924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 22234923 - 22234819
Alignment:
Q  3 acatgattcaatgcaattttatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgct 102  Q
    |||| ||||| || |||| ||||||| ||||||||||||||||| ||||| |||   ||||| ||||| |||||||  ||| ||||||| ||| ||||||    
T  22234923 acataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacac-gacacgtgtccgacaccaggacacagctaatccgagaagtgttcgtgct 22234825  T
Q  103 tcatag 108  Q
    ||||||    
T  22234824 tcatag 22234819  T

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Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 24343554 - 24343632
Alignment:
Q  30 ggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||||||||| ||||| ||||  ||||| |||||||||||| | ||  | ||| | ||||||||||||||||    
T  24343554 ggtgtcgtgtcggtgtccgacaccgacgcgtgtccgacaccgggacacgcctattctgaggagtgtccgtgcttcatag 24343632  T

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Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 10133756 - 10133828
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||||||||||||||  ||||| ||||| |||||||| ||| | ||| || || | ||||||||||    
T  10133756 gtgtcggtgtcagacactgacgcgtgtccgacaccaggacacacctaatctgaggaacgttcatgcttcatag 10133828  T

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Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 109
Target Start/End: Complemental strand, 18841024 - 18840952
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatagt 109  Q
    ||||||||||||||||| |||  |||||| |||||||||||||| ||| ||||| | |||||||||||||||||    
T  18841024 gtgtcggtgtcagacac-gacacatgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatagt 18840952  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 18622671 - 18622721
Alignment:
Q  58 tatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||| |||||||||||||||||| ||||| | ||||||||||||||||    
T  18622671 tatgtcctacaccgggacacacttaatccgaggagtgtccgtgcttcatag 18622721  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 37419796 - 37419873
Alignment:
Q  30 ggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||||||||| ||||| || |  ||||| |||||||||||| | ||| ||||| | ||||||||||||||||    
T  37419796 ggtgtcgtgtcggtgtcggacac-gatgcgtgtccgacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000001; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 9828070 - 9828174
Alignment:
Q  3 acatgattcaatgcaattttatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgct 102  Q
    |||| ||||| || |||||||||||| ||||||||||| ||||||||||| |||   ||||| ||||||||||||   ||| ||||| | ||||||||||    
T  9828070 acataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacac-gacacgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgct 9828168  T
Q  103 tcatag 108  Q
    ||||||    
T  9828169 tcatag 9828174  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 108
Target Start/End: Original strand, 32899932 - 32900010
Alignment:
Q  30 ggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||| ||||||||||| ||||| |||| |||||  |||||||||||| | ||| ||||| | ||||| ||||||||||    
T  32899932 ggtgttgtgtcggtgtcggacaccgacgcatgtcggacaccgggacacccctaatccgaggattgtccttgcttcatag 32900010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 78
Target Start/End: Complemental strand, 24176366 - 24176325
Alignment:
Q  37 tgtcggtgtcagacactgacgtatgtccaacaccgggacaca 78  Q
    |||||||||| ||||| |||| ||||||||||||||||||||    
T  24176366 tgtcggtgtcggacaccgacgaatgtccaacaccgggacaca 24176325  T

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Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 47989545 - 47989628
Alignment:
Q  25 gtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatagt 109  Q
    |||| ||||||||||||||||| ||||| |||  |||||  ||| |||||||| | ||| ||||| | |||||||||||||||||    
T  47989545 gtgtcggtgtcgtgtcggtgtcggacac-gacacatgtctgacatcgggacacgcctaatccgaggagtgtccgtgcttcatagt 47989628  T

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Target: chr8 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 29510315 - 29510233
Alignment:
Q  25 gtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||| ||||| ||||||||||| ||||| ||||  ||||| |||||||||||||| ||| ||||| | ||||||||||||||||    
T  29510315 gtgtcggtgtagtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Complemental strand, 14513180 - 14513108
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||||||||| |||| |||||| ||||||| |||||| ||| || |||| |||| ||| |||||||    
T  14513180 gtgtcggtgtcagacaccgacgcatgtccgacaccggaacacacctaatccaagaattgtctgtgattcatag 14513108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 22652024 - 22652106
Alignment:
Q  25 gtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||| ||||||||||||||||| ||||| ||| | ||||| ||||||||||||   ||| ||||| | ||||||||||||||||    
T  22652024 gtgtcggtgtcgtgtcggtgtcggacac-gacatgtgtccgacaccgggacacgtctaatccgaggagtgtccgtgcttcatag 22652106  T

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Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 29447484 - 29447542
Alignment:
Q  17 aattttatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggaca 76  Q
    |||| ||||||| ||||||||||||||||||||||| ||| | ||||| |||||||||||    
T  29447484 aattatatgtgttggtgtcgtgtcggtgtcagacac-gacatgtgtccgacaccgggaca 29447542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000008; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 37077382 - 37077488
Alignment:
Q  1 taacatgattcaatgcaattttatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtg 100  Q
    |||||| |||||||| |||  |||||||   |||| ||||||||||  |||| |||| |||||| |||| ||||||||| ||| || || ||||||||||    
T  37077382 taacataattcaatggaatcatatgtgtcattgtcatgtcggtgtcgtacacggacgcatgtccgacacggggacacacctaatccaaggaatgtccgtg 37077481  T
Q  101 cttcata 107  Q
    |||||||    
T  37077482 cttcata 37077488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 52369834 - 52369906
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||||||| || ||||| ||||  |||||||||||||||||||| ||  ||||| | ||||||||||||||||    
T  52369834 gtgtcggtatcggacaccgacgcgtgtccaacaccgggacacacctattccgaggagtgtccgtgcttcatag 52369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 66 - 108
Target Start/End: Complemental strand, 49651758 - 49651716
Alignment:
Q  66 acaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||    
T  49651758 acaccgggacacacctaatccgagaagtgtccgtgcttcatag 49651716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 8039863 - 8039763
Alignment:
Q  8 attcaatgcaattttatgtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcata 107  Q
    ||||| || |||| ||||||| ||||||||||||||||| |||| |||   |||||| |||||||||||| ||||| ||||  | | || ||||||||||    
T  8039863 attcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggaca-tgagacatgtccgacaccgggacacgcttaatccgaagagtatctgtgcttcata 8039765  T
Q  108 gt 109  Q
    ||    
T  8039764 gt 8039763  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 598256 - 598327
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||||||||| |||   ||||| |||||||||||| | ||| ||||||| ||||||||||||||||    
T  598256 gtgtcggtgtcagacac-gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

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Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 60 - 109
Target Start/End: Original strand, 6490787 - 6490836
Alignment:
Q  60 tgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatagt 109  Q
    ||||| |||||||||||| ||||| ||||| | |||||||||||||||||    
T  6490787 tgtccgacaccgggacacgcttaatccgaggagtgtccgtgcttcatagt 6490836  T

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Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 7197286 - 7197238
Alignment:
Q  59 atgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcata 107  Q
    |||||| ||||||||| || ||||  |||||||||||||||||||||||    
T  7197286 atgtccgacaccgggatactcttattccgagaaatgtccgtgcttcata 7197238  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 21880200 - 21880271
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||| ||||| |||  |||||| ||||| |||||| | ||| ||||||| ||||||||||||||||    
T  21880200 gtgtcggtgtcggacac-gacacatgtccgacaccaggacacgcctaatccgagaagtgtccgtgcttcatag 21880271  T

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Target: scaffold0652 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 473 - 403
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcata 107  Q
    ||||||||||| ||||| ||||  ||||| |||||||||||||| ||| ||||| | |||||||||||||||    
T  473 gtgtcggtgtcggacac-gacgcgtgtccgacaccgggacacacctaatccgaggagtgtccgtgcttcata 403  T

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Target: scaffold0003 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 108
Target Start/End: Original strand, 241642 - 241724
Alignment:
Q  25 gtgtgggtgtcgtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||| |||||||||| |||||| ||||| |||   ||||| |||||||||||| | ||| ||||||| ||||||||||||||||    
T  241642 gtgtcggtgtcgtgttggtgtcggacac-gacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 241724  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000003; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 14873593 - 14873641
Alignment:
Q  60 tgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||||||||||||||||| | ||| ||||| | ||||||||||||||||    
T  14873593 tgtccaacaccgggacacgcctaatccgaggagtgtccgtgcttcatag 14873641  T

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Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 108
Target Start/End: Complemental strand, 17393365 - 17393305
Alignment:
Q  48 gacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||| ||||| ||||| |||||||||||| | ||| ||||| ||||| ||||||||||||    
T  17393365 gacaccgacgtgtgtccgacaccgggacactcgtaatccgaggaatgttcgtgcttcatag 17393305  T

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Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 108
Target Start/End: Complemental strand, 17593711 - 17593663
Alignment:
Q  60 tgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    |||||||||||||||||| ||||| ||||| | ||||||| ||||||||    
T  17593711 tgtccaacaccgggacacgcttaatccgaggagtgtccgtacttcatag 17593663  T

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Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 108
Target Start/End: Original strand, 43564929 - 43565000
Alignment:
Q  36 gtgtcggtgtcagacactgacgtatgtccaacaccgggacacacttaacccgagaaatgtccgtgcttcatag 108  Q
    ||||||||||| ||||| ||| | ||||| || ||||||||| | ||| ||||||| ||||||||||||||||    
T  43564929 gtgtcggtgtcggacac-gacatgtgtccgacgccgggacacgcctaatccgagaagtgtccgtgcttcatag 43565000  T

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