View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3582_low_52 (Length: 355)
Name: NF3582_low_52
Description: NF3582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3582_low_52 |
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Alignment Details
Target: chr7 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 15 - 338
Target Start/End: Original strand, 34886626 - 34886948
Alignment:
| Q |
15 |
tatccaaaactataatgggaaatttgttaagggtttcatgtgtaagtttgatcaggaaatgctcttgttgcataattaaagggataaatcttactcctgt |
114 |
Q |
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| T |
34886626 |
tatccgaaactataatgggaaatttgttaagggtttcatgtgtaagcttggtcaggaaatgctcttgttgcataattaaagggataaatcttactcctgt |
34886725 |
T |
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| Q |
115 |
cattcttgaaacaaattccatgtatcccatcaatatgatctagaatcatcgtacttccacattttacctcacacatcttctctgagaggtcatatgcctc |
214 |
Q |
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| T |
34886726 |
cattcttgaaacaaattccatgtatcc-atcaatatgatctagaatcatcgtacttccacattttacctcacacatcttctctgagaggtcatatgcctc |
34886824 |
T |
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| Q |
215 |
atcaacctcacgagattgactttttatataaatcgtattcaccatcccgagtttgactctgtatataaatcatattcactgttaaccaaaacatttgtgt |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
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| T |
34886825 |
atcaacctcacgagattgactttttatataaatcgtattcaccatcccgagtttgactttgtatataaatcatattcaccgttaaccaaaacatttgtgt |
34886924 |
T |
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| Q |
315 |
tgacactcgcattaagggtaggac |
338 |
Q |
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| T |
34886925 |
tgacactcgcattaagggtaggac |
34886948 |
T |
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