View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3582_low_66 (Length: 299)

Name: NF3582_low_66
Description: NF3582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3582_low_66
NF3582_low_66
[»] chr1 (65 HSPs)
chr1 (1-284)||(37473108-37473391)
chr1 (11-122)||(17830025-17830136)
chr1 (22-128)||(41195293-41195399)
chr1 (11-128)||(14576741-14576858)
chr1 (31-127)||(33541816-33541912)
chr1 (11-130)||(14331652-14331771)
chr1 (37-131)||(38247316-38247409)
chr1 (52-123)||(47498962-47499033)
chr1 (15-122)||(51688576-51688683)
chr1 (11-129)||(3234111-3234229)
chr1 (33-127)||(5741528-5741622)
chr1 (21-130)||(1510407-1510516)
chr1 (52-124)||(5894282-5894354)
chr1 (35-130)||(17727207-17727302)
chr1 (11-65)||(27976523-27976577)
chr1 (11-121)||(30191863-30191973)
chr1 (32-126)||(41505554-41505648)
chr1 (1-123)||(43990118-43990243)
chr1 (33-127)||(5720847-5720941)
chr1 (20-130)||(44932029-44932139)
chr1 (11-120)||(29904633-29904741)
chr1 (38-100)||(24552455-24552517)
chr1 (11-72)||(49938653-49938714)
chr1 (72-124)||(27820479-27820531)
chr1 (28-109)||(31774146-31774223)
chr1 (20-99)||(18556821-18556900)
chr1 (52-127)||(22343954-22344029)
chr1 (28-116)||(23198364-23198448)
chr1 (72-123)||(24562452-24562503)
chr1 (11-120)||(37769748-37769851)
chr1 (93-130)||(473029-473066)
chr1 (33-118)||(42391241-42391326)
chr1 (11-56)||(47432033-47432078)
chr1 (85-130)||(51190720-51190765)
chr1 (32-124)||(2294982-2295065)
chr1 (84-128)||(34795565-34795609)
chr1 (84-124)||(45855730-45855770)
chr1 (92-123)||(3887760-3887791)
chr1 (33-109)||(25549085-25549157)
chr1 (54-121)||(27146369-27146436)
chr1 (72-127)||(33546599-33546654)
chr1 (83-122)||(38189656-38189695)
chr1 (21-112)||(43589506-43589597)
chr1 (28-122)||(1509623-1509717)
chr1 (54-124)||(1829075-1829145)
chr1 (33-123)||(5709432-5709522)
chr1 (11-81)||(16145060-16145130)
chr1 (52-122)||(30581683-30581753)
chr1 (73-127)||(43230894-43230948)
chr1 (92-122)||(46423151-46423181)
chr1 (11-56)||(30582036-30582081)
chr1 (92-121)||(39906524-39906553)
chr1 (55-124)||(45975569-45975638)
chr1 (52-120)||(7069183-7069251)
chr1 (72-124)||(9572247-9572299)
chr1 (72-123)||(10665960-10666014)
chr1 (23-87)||(14385863-14385927)
chr1 (18-50)||(15609035-15609067)
chr1 (92-120)||(27970432-27970460)
chr1 (84-128)||(37617563-37617607)
chr1 (21-57)||(38189695-38189731)
chr1 (21-65)||(42174785-42174829)
chr1 (91-127)||(45145130-45145166)
chr1 (52-104)||(49825095-49825147)
chr1 (84-128)||(49938613-49938657)
[»] chr8 (42 HSPs)
chr8 (11-128)||(1058162-1058279)
chr8 (34-130)||(14956406-14956502)
chr8 (20-131)||(36963442-36963553)
chr8 (11-123)||(12976086-12976195)
chr8 (32-122)||(38750229-38750319)
chr8 (22-119)||(9130409-9130506)
chr8 (11-127)||(35534699-35534813)
chr8 (22-127)||(41821425-41821528)
chr8 (20-121)||(29168149-29168250)
chr8 (20-123)||(32975930-32976033)
chr8 (20-99)||(42043442-42043521)
chr8 (33-116)||(40637407-40637486)
chr8 (11-64)||(12497319-12497372)
chr8 (20-101)||(38353242-38353322)
chr8 (52-124)||(26215375-26215447)
chr8 (72-128)||(29819029-29819085)
chr8 (66-130)||(40980993-40981057)
chr8 (28-116)||(10628183-10628267)
chr8 (22-129)||(15180406-15180512)
chr8 (93-128)||(18133551-18133586)
chr8 (28-127)||(28763239-28763338)
chr8 (53-124)||(34236041-34236112)
chr8 (11-72)||(11861728-11861789)
chr8 (52-121)||(41475179-41475248)
chr8 (52-100)||(40859837-40859885)
chr8 (52-122)||(2840239-2840310)
chr8 (52-122)||(2844926-2844997)
chr8 (72-119)||(9956951-9956998)
chr8 (13-72)||(30251539-30251598)
chr8 (58-123)||(900821-900887)
chr8 (11-81)||(10758344-10758414)
chr8 (11-65)||(25930642-25930696)
chr8 (92-122)||(27752433-27752463)
chr8 (58-123)||(37353373-37353439)
chr8 (11-72)||(16825625-16825686)
chr8 (74-129)||(4389817-4389873)
chr8 (52-120)||(5404500-5404568)
chr8 (92-124)||(22790509-22790541)
chr8 (33-81)||(27028751-27028799)
chr8 (96-128)||(31716392-31716424)
chr8 (61-128)||(41589555-41589625)
chr8 (28-64)||(42051982-42052018)
[»] chr3 (51 HSPs)
chr3 (11-131)||(30956714-30956834)
chr3 (11-131)||(30972526-30972646)
chr3 (17-127)||(20880343-20880453)
chr3 (11-127)||(35959544-35959660)
chr3 (42-129)||(31365391-31365478)
chr3 (32-131)||(53789570-53789669)
chr3 (20-128)||(24684920-24685028)
chr3 (20-121)||(1508677-1508779)
chr3 (29-123)||(944363-944459)
chr3 (11-127)||(20170389-20170505)
chr3 (14-121)||(2719341-2719448)
chr3 (21-131)||(19983642-19983752)
chr3 (52-122)||(34235195-34235265)
chr3 (11-109)||(46778315-46778413)
chr3 (20-105)||(12862344-12862429)
chr3 (35-116)||(28795944-28796025)
chr3 (32-124)||(3845671-3845763)
chr3 (60-128)||(34034036-34034104)
chr3 (72-124)||(46886836-46886888)
chr3 (62-130)||(47132240-47132308)
chr3 (28-116)||(12833871-12833955)
chr3 (11-122)||(36631139-36631250)
chr3 (52-122)||(402660-402730)
chr3 (11-109)||(29520567-29520664)
chr3 (30-112)||(39980610-39980692)
chr3 (28-109)||(7814244-7814321)
chr3 (85-124)||(849551-849590)
chr3 (56-131)||(20257422-20257497)
chr3 (11-65)||(583974-584028)
chr3 (11-109)||(5331178-5331275)
chr3 (37-99)||(30443658-30443720)
chr3 (44-125)||(139794-139875)
chr3 (38-131)||(466062-466157)
chr3 (52-124)||(31403237-31403309)
chr3 (92-128)||(39602337-39602373)
chr3 (52-103)||(40665329-40665380)
chr3 (11-65)||(7301266-7301320)
chr3 (20-58)||(10704670-10704708)
chr3 (20-70)||(18405929-18405979)
chr3 (72-122)||(20003433-20003483)
chr3 (50-124)||(26990607-26990681)
chr3 (54-124)||(29002961-29003031)
chr3 (88-125)||(10704708-10704745)
chr3 (54-107)||(23815949-23816002)
chr3 (93-121)||(24085485-24085513)
chr3 (72-116)||(28240213-28240257)
chr3 (72-120)||(34610945-34610993)
chr3 (58-122)||(35328288-35328351)
chr3 (84-120)||(36507241-36507277)
chr3 (15-79)||(37689147-37689211)
chr3 (40-127)||(42800032-42800117)
[»] chr2 (54 HSPs)
chr2 (11-124)||(41407170-41407283)
chr2 (14-131)||(42659242-42659359)
chr2 (33-127)||(1633656-1633750)
chr2 (11-117)||(32592463-32592569)
chr2 (11-131)||(15305518-15305639)
chr2 (32-131)||(12795654-12795753)
chr2 (13-115)||(3311922-3312024)
chr2 (54-124)||(39659639-39659709)
chr2 (54-122)||(2416194-2416262)
chr2 (38-130)||(11863794-11863886)
chr2 (11-126)||(15757747-15757869)
chr2 (22-128)||(33319912-33320025)
chr2 (32-126)||(23974599-23974693)
chr2 (11-116)||(13325447-13325552)
chr2 (55-120)||(26626759-26626824)
chr2 (38-124)||(41293346-41293434)
chr2 (28-96)||(26201925-26201993)
chr2 (11-122)||(38010283-38010394)
chr2 (33-116)||(5599164-5599243)
chr2 (11-96)||(41241220-41241305)
chr2 (11-64)||(41812178-41812231)
chr2 (83-128)||(41812234-41812279)
chr2 (11-120)||(41851408-41851517)
chr2 (11-96)||(42868549-42868634)
chr2 (11-123)||(12464561-12464673)
chr2 (52-124)||(19608744-19608816)
chr2 (52-124)||(28792329-28792401)
chr2 (11-99)||(31561841-31561929)
chr2 (73-124)||(4606860-4606911)
chr2 (20-65)||(45229440-45229485)
chr2 (92-124)||(7043881-7043913)
chr2 (54-122)||(9395011-9395079)
chr2 (52-124)||(26143760-26143831)
chr2 (52-124)||(40682492-40682564)
chr2 (86-122)||(40835435-40835471)
chr2 (73-124)||(41880642-41880694)
chr2 (92-123)||(9174694-9174725)
chr2 (32-122)||(31744237-31744325)
chr2 (83-122)||(40279082-40279121)
chr2 (67-122)||(43570297-43570352)
chr2 (66-120)||(27695730-27695784)
chr2 (92-126)||(43036507-43036541)
chr2 (11-48)||(4026762-4026799)
chr2 (39-92)||(12037971-12038024)
chr2 (11-80)||(22971606-22971674)
chr2 (38-127)||(28330414-28330502)
chr2 (54-130)||(39567775-39567852)
chr2 (55-124)||(42457827-42457896)
chr2 (13-77)||(10258592-10258656)
chr2 (11-51)||(10619303-10619343)
chr2 (76-124)||(12194821-12194869)
chr2 (92-128)||(21827947-21827983)
chr2 (55-123)||(36534668-36534736)
chr2 (92-120)||(41449791-41449819)
[»] chr7 (51 HSPs)
chr7 (23-123)||(21568728-21568828)
chr7 (13-131)||(5947023-5947137)
chr7 (11-132)||(46078008-46078129)
chr7 (36-127)||(45263959-45264050)
chr7 (20-131)||(4970885-4970996)
chr7 (32-128)||(9210493-9210589)
chr7 (11-127)||(33128623-33128739)
chr7 (52-119)||(33552940-33553007)
chr7 (12-127)||(38500007-38500122)
chr7 (72-129)||(27863846-27863903)
chr7 (20-124)||(23989581-23989685)
chr7 (11-103)||(45806565-45806657)
chr7 (43-128)||(3308372-3308457)
chr7 (11-72)||(33266572-33266633)
chr7 (22-122)||(18865149-18865249)
chr7 (52-124)||(33672957-33673029)
chr7 (4-128)||(40252188-40252301)
chr7 (38-124)||(46280374-46280460)
chr7 (11-127)||(119775-119892)
chr7 (84-123)||(11619347-11619386)
chr7 (92-127)||(40377997-40378032)
chr7 (11-126)||(45004633-45004748)
chr7 (55-122)||(47795838-47795905)
chr7 (11-120)||(28900760-28900870)
chr7 (52-130)||(39393695-39393772)
chr7 (20-70)||(48140139-48140189)
chr7 (20-61)||(31247666-31247707)
chr7 (20-64)||(420289-420333)
chr7 (92-124)||(28210324-28210356)
chr7 (11-128)||(30571019-30571128)
chr7 (11-59)||(45806414-45806462)
chr7 (72-124)||(46139821-46139873)
chr7 (52-130)||(7612331-7612410)
chr7 (65-116)||(17248434-17248485)
chr7 (37-72)||(17983715-17983750)
chr7 (11-70)||(20526369-20526428)
chr7 (52-115)||(21619295-21619358)
chr7 (11-126)||(34464301-34464415)
chr7 (32-123)||(38138588-38138679)
chr7 (17-127)||(40196243-40196350)
chr7 (13-107)||(20428353-20428447)
chr7 (52-122)||(20881755-20881825)
chr7 (84-122)||(22296366-22296404)
chr7 (11-48)||(28613622-28613659)
chr7 (11-52)||(39279704-39279745)
chr7 (97-130)||(45593411-45593444)
chr7 (92-124)||(7512313-7512345)
chr7 (28-60)||(31247633-31247665)
chr7 (72-116)||(39967805-39967849)
chr7 (92-128)||(46407074-46407110)
chr7 (54-122)||(47177517-47177585)
[»] chr5 (49 HSPs)
chr5 (11-127)||(3735579-3735695)
chr5 (13-128)||(32372489-32372604)
chr5 (11-122)||(12554334-12554445)
chr5 (38-121)||(7319126-7319209)
chr5 (32-128)||(7706085-7706184)
chr5 (11-122)||(24030490-24030601)
chr5 (11-128)||(12857793-12857910)
chr5 (21-130)||(25461853-25461962)
chr5 (20-129)||(16458075-16458188)
chr5 (55-119)||(19460508-19460572)
chr5 (15-123)||(40426632-40426743)
chr5 (52-130)||(9202867-9202945)
chr5 (20-122)||(10639825-10639926)
chr5 (57-126)||(16938001-16938070)
chr5 (20-125)||(32941339-32941443)
chr5 (11-56)||(35445992-35446037)
chr5 (38-131)||(40439070-40439162)
chr5 (20-124)||(31051767-31051871)
chr5 (21-128)||(25460957-25461064)
chr5 (52-123)||(28776855-28776926)
chr5 (52-111)||(39105356-39105415)
chr5 (21-119)||(25461744-25461842)
chr5 (11-72)||(42500313-42500374)
chr5 (52-122)||(6096427-6096494)
chr5 (11-123)||(13697847-13697959)
chr5 (38-122)||(26005353-26005437)
chr5 (32-112)||(34669836-34669916)
chr5 (59-124)||(32703574-32703639)
chr5 (20-67)||(3932782-3932830)
chr5 (52-120)||(34736645-34736713)
chr5 (48-100)||(42646548-42646600)
chr5 (52-122)||(10771997-10772068)
chr5 (92-123)||(12433539-12433570)
chr5 (84-122)||(3520302-3520340)
chr5 (32-126)||(32009857-32009951)
chr5 (52-125)||(42573898-42573972)
chr5 (52-113)||(7984868-7984929)
chr5 (28-65)||(15015779-15015816)
chr5 (20-65)||(29925769-29925814)
chr5 (60-124)||(34590355-34590420)
chr5 (20-65)||(36227723-36227768)
chr5 (52-116)||(465841-465905)
chr5 (52-120)||(1465138-1465206)
chr5 (72-116)||(10502557-10502601)
chr5 (20-80)||(12857435-12857494)
chr5 (41-113)||(35299617-35299689)
chr5 (84-124)||(37112398-37112438)
chr5 (92-124)||(42100198-42100230)
chr5 (84-124)||(42228030-42228070)
[»] chr6 (27 HSPs)
chr6 (11-129)||(24626159-24626277)
chr6 (23-131)||(34430578-34430686)
chr6 (22-127)||(6538383-6538488)
chr6 (21-128)||(30926405-30926510)
chr6 (11-106)||(18076083-18076178)
chr6 (13-130)||(8147568-8147682)
chr6 (24-123)||(26550304-26550404)
chr6 (20-124)||(35070727-35070833)
chr6 (52-130)||(264244-264322)
chr6 (52-124)||(35069431-35069503)
chr6 (69-120)||(10645465-10645516)
chr6 (22-65)||(30536657-30536700)
chr6 (57-119)||(9632785-9632847)
chr6 (11-65)||(30536406-30536460)
chr6 (74-123)||(14929604-14929653)
chr6 (11-116)||(33943147-33943251)
chr6 (32-128)||(19411592-19411688)
chr6 (20-67)||(9763390-9763437)
chr6 (30-65)||(14164050-14164085)
chr6 (20-123)||(29754176-29754279)
chr6 (36-107)||(32014162-32014233)
chr6 (11-65)||(18690422-18690476)
chr6 (53-130)||(847931-848008)
chr6 (32-81)||(6909982-6910031)
chr6 (55-124)||(23063650-23063719)
chr6 (20-65)||(31623488-31623533)
chr6 (72-124)||(658584-658636)
[»] chr4 (49 HSPs)
chr4 (12-130)||(17204001-17204119)
chr4 (11-127)||(43505824-43505938)
chr4 (11-130)||(50681177-50681296)
chr4 (15-123)||(19494784-19494892)
chr4 (11-106)||(31851343-31851436)
chr4 (11-99)||(41336655-41336742)
chr4 (11-123)||(25904298-25904414)
chr4 (28-131)||(45935325-45935421)
chr4 (52-124)||(35571951-35572022)
chr4 (14-128)||(24169126-24169240)
chr4 (33-125)||(18814960-18815051)
chr4 (14-128)||(29912814-29912928)
chr4 (52-130)||(50662851-50662929)
chr4 (17-72)||(33587048-33587103)
chr4 (52-130)||(3155476-3155554)
chr4 (52-130)||(22539166-22539244)
chr4 (52-122)||(44863081-44863151)
chr4 (11-128)||(54069505-54069623)
chr4 (11-80)||(15177290-15177359)
chr4 (12-81)||(22030116-22030184)
chr4 (28-109)||(1242380-1242457)
chr4 (11-126)||(44797759-44797868)
chr4 (20-130)||(15173397-15173506)
chr4 (20-58)||(20109515-20109553)
chr4 (55-124)||(26520351-26520421)
chr4 (67-128)||(27027-27088)
chr4 (20-65)||(31076483-31076528)
chr4 (11-72)||(42404086-42404147)
chr4 (52-124)||(1203236-1203303)
chr4 (84-124)||(4212811-4212851)
chr4 (4-64)||(13216285-13216345)
chr4 (84-124)||(27330186-27330226)
chr4 (28-128)||(46592315-46592415)
chr4 (74-122)||(47119086-47119134)
chr4 (52-122)||(2987069-2987140)
chr4 (55-122)||(11389407-11389474)
chr4 (92-131)||(34430832-34430871)
chr4 (11-77)||(3070061-3070127)
chr4 (32-105)||(16200090-16200164)
chr4 (86-128)||(20108904-20108946)
chr4 (86-128)||(39603594-39603636)
chr4 (92-122)||(49202527-49202557)
chr4 (93-122)||(25885756-25885785)
chr4 (52-124)||(30066885-30066958)
chr4 (92-133)||(34213737-34213778)
chr4 (92-120)||(22030092-22030120)
chr4 (92-124)||(23319727-23319759)
chr4 (52-124)||(35571747-35571818)
chr4 (92-128)||(39011215-39011251)
[»] scaffold0018 (1 HSPs)
scaffold0018 (11-130)||(157970-158089)
[»] scaffold0012 (1 HSPs)
scaffold0012 (20-116)||(207678-207774)
[»] scaffold0050 (1 HSPs)
scaffold0050 (57-122)||(58475-58540)


Alignment Details
Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 284
Target Start/End: Complemental strand, 37473391 - 37473108
Alignment:
Q  1 cataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37473391 cataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 37473292  T
Q  101 aaataagttgtttatccaaacaggcccttaacatttgtttcatgcttctgcaataaggcctttattttctgagccatatggagttattaccctacaccta 200  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37473291 aaataagttgtttatccaaacaggcccttaacatttgtttcaggcttctgcaataaggtctttattttctgagccatatggagttattaccctacaccta 37473192  T
Q  201 aatatttattaattactaccttggttttatgctccccgttgctttgatgtgatcttgttggaggatgatttttcttgatgtgat 284  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37473191 aatatttattaattactaccttggttttatgctccccgttgctttgatgtgatcttgttggaggatgatttttcttgatgtgat 37473108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 17830136 - 17830025
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||||||  ||||||  |||||||| | ||| ||||    
T  17830136 ttaactttattttatcatttgctataaaaatagcttatgtaatcgtatagataagtgcttatcatgataagtgcttgtgatataagctgaagatatgttg 17830037  T
Q  111 tttatccaaaca 122  Q
    ||||||||||||    
T  17830036 tttatccaaaca 17830025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 41195293 - 41195399
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||||||| |||||||||||| |||||||| |||||||||||| | || ||| ||||||  ||||||| |||||||||||||||||| |||||||||||    
T  41195293 ttatcatttactataaaaatagtttatgtaaacttatacataagcgattatcaggataagcgcttgtgctataagctgcaaataagttatttatccaaac 41195392  T
Q  122 aggccct 128  Q
    |||||||    
T  41195393 aggccct 41195399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 14576741 - 14576858
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| ||| ||||  ||||||||||  | |||||||| |||||||||| ||||||||||| ||||||| |||||||| ||||||| ||    
T  14576741 ttaactttattttatcctttactatggaaatagcttacatgagcttataaataagtgcttatcatgataagagcttgtgctataagctggaaataagatg 14576840  T
Q  111 tttatccaaacaggccct 128  Q
    ||||||| ||||||||||    
T  14576841 tttatcccaacaggccct 14576858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 31 - 127
Target Start/End: Original strand, 33541816 - 33541912
Alignment:
Q  31 gctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||||||| |||||  ||||||||||||||| |||| |||||||||  |||||||| |||| ||||||||||||||||||||||||| |||||    
T  33541816 gctataaaaatatcttattcaagcttatacataagcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaaactggccc 33541912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 14331771 - 14331652
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| | | || || ||||||||||||| ||||||||||||||||||| |||||| |||  ||||||| ||||||| |||||||| ||    
T  14331771 ttaactttattttatcttgttctgtagaaatagcttatgttagcttatacataagtgcttatcatgagaagcgcttgtgctataagcttcaaataagctg 14331672  T
Q  111 tttatccaaacaggccctta 130  Q
    |||||| ||||||| |||||    
T  14331671 tttatctaaacagggcctta 14331652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 131
Target Start/End: Complemental strand, 38247409 - 38247316
Alignment:
Q  37 aaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    |||| ||||||||| ||||||||||||||||| | ||||||||||  ||||||| ||||||||||||| || |||||||||||||||||||||||    
T  38247409 aaaacagcttatgtgagcttatacataagtgcatatcatgataagtgcttgtgctataagctgcaaat-agctgtttatccaaacaggcccttaa 38247316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 47498962 - 47499033
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    |||||||||| ||| |||| |||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  47498962 agcttatacacaagcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaaacag 47499033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 15 - 122
Target Start/End: Complemental strand, 51688683 - 51688576
Alignment:
Q  15 ctttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttta 114  Q
    |||| ||||||| ||| ||| | |||||||| ||||||||||||| ||||   ||| |||||||||| |||||| | |||||||||||||||||||||||    
T  51688683 ctttattttatcttttcctacataaatagctcatgtaagcttatatataaacacttatcatgataagcacttgtactataagctgcaaataagttgttta 51688584  T
Q  115 tccaaaca 122  Q
    ||||||||    
T  51688583 tccaaaca 51688576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 129
Target Start/End: Original strand, 3234111 - 3234229
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| |||||||||| |||||||| || |||||||||| | ||||||| ||||| |||| ||||||||||  ||||||| ||||| |||||| |||||     
T  3234111 ttaacgttgttttatcttttgctatgaatatagcttatgcacgcttatatataagcgcttatcatgataagcgcttgtgctataagttgcaaacaagtta 3234210  T
Q  111 tttatccaaacaggccctt 129  Q
     ||||||||||| ||||||    
T  3234211 gttatccaaacaagccctt 3234229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 5741622 - 5741528
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||||||||||||||| |||||||||||| |||| |||||||| |  ||||||| ||||||  |||||||| | |||||||||||||||||    
T  5741622 tataaaaatagcttatgtaaacttatacataagcgcttatcatgataggtgcttgtgctataagccacaaataagatatttatccaaacaggccc 5741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 1510407 - 1510516
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||| |||| | |||||||||||| || ||||||||| |||||||||| ||| ||||||  ||||||| ||||| | |||||||| ||||||||||||    
T  1510407 tttatcttttgttttaaaaatagcttttgcaagcttatatataagtgcttatcaagataagcgcttgtgctataagatacaaataagctgtttatccaaa 1510506  T
Q  121 caggccctta 130  Q
    |||| |||||    
T  1510507 caggtcctta 1510516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 5894282 - 5894354
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||| |||| |||||||||| |||||||| ||||||| |||||||| ||||||||||||||||    
T  5894282 agcttatacataagcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaaacagg 5894354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 35 - 130
Target Start/End: Original strand, 17727207 - 17727302
Alignment:
Q  35 taaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||||||||||||| || ||||||  |||| |||| || |||||||  ||||||| ||||||| || ||||||||||||||||||||||||||||    
T  17727207 taaaaatagcttatgcaaccttatatctaagcgcttatcttgataagtgcttgtgctataagctacacataagttgtttatccaaacaggccctta 17727302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 27976577 - 27976523
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    |||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  27976577 ttaactttgttcaatcatttgctataaaaatagcttatgtaagcttatacataag 27976523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 121
Target Start/End: Complemental strand, 30191973 - 30191863
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||  |||||||||||||||||||| |||  |||||||| |||||||| |||| ||||| |||| ||| ||||| || ||||||| |     
T  30191973 ttaactttattttattttttgctataaaaatagcttaggtatacttatacacaagtgcttatcataataagcacttctgctataagttgtaaataagcta 30191874  T
Q  111 tttatccaaac 121  Q
    |||||||||||    
T  30191873 tttatccaaac 30191863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 41505648 - 41505554
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 126  Q
    |||||||||||||||||||||||  || ||||||  ||| |||| |||||   |||||| |||||||||||||||| ||||||||||||||||||    
T  41505648 ctataaaaatagcttatgtaagccaatgcataagcacttatcatcataagcgtttgtgctataagctgcaaataagctgtttatccaaacaggcc 41505554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43990243 - 43990118
Alignment:
Q  1 cataaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtg---cttgtcatgataagaacttgtgcaataagc 97  Q
    ||||||| | ||||||||||||||||| |||| |||||||||| |||||| ||||||||||||||||    || |||||| ||   ||||||| |||| |    
T  43990243 cataaacaatttaactttgttttatcacttgccataaaaatagtttatgtgagcttatacataagtgtttattatcatgacaaacgcttgtgctataaac 43990144  T
Q  98 tgcaaataagttgtttatccaaacag 123  Q
    |||||||| | | |||||||||||||    
T  43990143 tgcaaatacgctatttatccaaacag 43990118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 127
Target Start/End: Complemental strand, 5720941 - 5720847
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||||||| |||| |||||||||||| |||| |||||||| |  ||||||  ||||||  |||||||| | |||||||||||||||||    
T  5720941 tataaaaatagcttacgtaaacttatacataagcgcttatcatgataggtgcttgtgttataagccacaaataagatatttatccaaacaggccc 5720847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 44932029 - 44932139
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||||||||||| |||| ||||| |||||||||| ||||||||| ||||||||||   |  ||  ||| |||||||| ||  |||||||||||    
T  44932029 ttttatcttttgctataaatatagtttatgcaagcttatacctaagtgcttatcatgataagtgttaatgttatatgctgcaaacaaactgtttatccaa 44932128  T
Q  120 acaggccctta 130  Q
    |||||||||||    
T  44932129 acaggccctta 44932139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 29904741 - 29904633
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||| ||| ||||||| ||||||||||||||||||||| | ||||||| ||||||   || ||||||||||  ||||  | |||||||||| ||||||||    
T  29904741 ttaaatttattttatcttttgctataaaaatagcttatatgagcttat-cataagcttttatcatgataagcgcttgaactataagctgcatataagttg 29904643  T
Q  111 tttatccaaa 120  Q
    ||||||||||    
T  29904642 tttatccaaa 29904633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 100
Target Start/End: Original strand, 24552455 - 24552517
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 100  Q
    ||||||||||||||||||| |||||||| |||| |||||||||  |||||||| |||||||||    
T  24552455 aaatagcttatgtaagcttgtacataagcgcttatcatgataatcacttgtgctataagctgc 24552517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 49938714 - 49938653
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    ||||||||  |||||| ||||||||| ||||||||||||| |||||||||||||| ||||||    
T  49938714 ttaactttaatttatcctttgctatagaaatagcttatgtgagcttatacataagcgcttgt 49938653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 27820479 - 27820531
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||||||    
T  27820479 tcatgataagcgcttatgctataagctgcaaataagttgtttatccaaacagg 27820531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 31774146 - 31774223
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||||||||||||||||||||    |||||| |||||||||| | |||||||| |||| | | ||||||||||||||||||    
T  31774146 tttgctataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 31774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 18556900 - 18556821
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 99  Q
    ||||||| ||||| |||||||||||||||  ||||||||||| ||| ||| |||| ||||||  ||||||| ||||||||    
T  18556900 ttttatcttttgcaataaaaatagcttatacaagcttatacacaagcgctcgtcacgataagtgcttgtgctataagctg 18556821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 127
Target Start/End: Complemental strand, 22344029 - 22343954
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||| ||||||  ||| ||||||||||  |||||||  |||| ||||||||||||| ||||||||||||||||    
T  22344029 agcttatgcataagctcttatcatgataagcgcttgtgcggtaagttgcaaataagttgattatccaaacaggccc 22343954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 23198448 - 23198364
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    ||||||||||||||||||||||    |||||| ||||||| || | |||||||| |||| ||  |||||||||||||||||| ||||||    
T  23198448 tttgctataaaaatagcttatg----cttataaataagtgtttattatgataagcacttatgttataagctgcaaataagttttttatc 23198364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 123
Target Start/End: Original strand, 24562452 - 24562503
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    |||||||||| || ||||| |||||||||||||||| |||||||||||||||    
T  24562452 tcatgataagcacatgtgctataagctgcaaataagctgtttatccaaacag 24562503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 120
Target Start/End: Original strand, 37769748 - 37769851
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| |||||||||||||||||||||||  ||||||||  ||||||||||  | ||      ||||| |||||||| ||| |||| ||||||||||    
T  37769748 ttaactttattttatcatttgctataaaaataatttatgtaaatttatacataatcgttt------ataagtacttgtgctataggctgtaaataagttg 37769841  T
Q  111 tttatccaaa 120  Q
    ||||| ||||    
T  37769842 tttattcaaa 37769851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 130
Target Start/End: Complemental strand, 473066 - 473029
Alignment:
Q  93 taagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  473066 taagctgcaaataagttgtttatccaaacagaccctta 473029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 33 - 118
Target Start/End: Complemental strand, 42391326 - 42391241
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatcca 118  Q
    ||||||||||| ||| | |||||||||||||||  ||| ||||||||||   ||||||  ||||| |||||||| |||||||||||    
T  42391326 tataaaaatagtttaagcaagcttatacataagcacttatcatgataagcttttgtgctgtaagccgcaaataaattgtttatcca 42391241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 47432078 - 47432033
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagctt 56  Q
    |||||||| ||||||| ||| |||||||||||||||||||||||||    
T  47432078 ttaactttattttatctttttctataaaaatagcttatgtaagctt 47432033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 85 - 130
Target Start/End: Complemental strand, 51190765 - 51190720
Alignment:
Q  85 ttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||| ||||||| ||||||||||||||||||||||||| |||||    
T  51190765 ttgtgctataagctacaaataagttgtttatccaaacaggacctta 51190720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 124
Target Start/End: Complemental strand, 2295065 - 2294982
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||| ||||||||||||||||||||| ||||||  ||| ||||||||||          ||||||||||||||||||| |||||||||||||    
T  2295065 ctatagaaatagcttatgtaagcttatgcataagcacttatcatgataag---------cataagctgcaaataagttgcttatccaaacagg 2294982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 34795565 - 34795609
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||| ||||| |||||||||| ||||||||||||||||||||    
T  34795565 cttgtgctataagatgcaaataagctgtttatccaaacaggccct 34795609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 45855770 - 45855730
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  45855770 cttgtgctataagctgcaaataagttggttatccaaacagg 45855730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 123
Target Start/End: Original strand, 3887760 - 3887791
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacag 123  Q
    ||||||||||||||||||||||||||||||||    
T  3887760 ataagctgcaaataagttgtttatccaaacag 3887791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 25549085 - 25549157
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    |||||||||||||||||    |||||| |||||||||| | |||||||| || | ||| ||||||||||||||||||    
T  25549085 tataaaaatagcttatg----cttataaataagtgcttattatgataagcacctatgccataagctgcaaataagtt 25549157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 54 - 121
Target Start/End: Original strand, 27146369 - 27146436
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    |||||||||||  |||| |||||||| | |||| ||| |||||||||||||||| | |||||||||||    
T  27146369 cttatacataaacgcttatcatgatatgtacttatgctataagctgcaaataagctatttatccaaac 27146436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 33546599 - 33546654
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||||  ||||||||  |||||||| |||||| |||||||||||||||||||    
T  33546599 tcatgataaacacttgtgctttaagctgcgaataagctgtttatccaaacaggccc 33546654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 38189695 - 38189656
Alignment:
Q  83 acttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||| |||| ||||||||||||||||||||||||||    
T  38189695 acttgtgctataaactgcaaataagttgtttatccaaaca 38189656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 112
Target Start/End: Original strand, 43589506 - 43589597
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    ||||||||||||||||| ||||| || |  || ||||||||||||||||| |||| ||||   ||| ||| |||| ||| ||||||||||||    
T  43589506 tttatcatttgctataacaatagtttgtacaaacttatacataagtgcttatcataataaaggcttatgctataaactgtaaataagttgtt 43589597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 1509717 - 1509623
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||| ||||||||| | ||| ||||||||| |||||  ||| ||||||||||   ||||||  ||||||  ||||||| ||||||||||||||    
T  1509717 tttgctgtaaaaataggtcatgcaagcttatatataagcacttatcatgataagtgattgtgctgtaagctaaaaataagctgtttatccaaaca 1509623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 1829075 - 1829145
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||| |||| ||||||||||   || ||| ||| | | |||||||||||||||||||||||||    
T  1829075 cttatacataagcgcttatcatgataagtgtttatgctataggtttcaaataagttgtttatccaaacagg 1829145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 123
Target Start/End: Complemental strand, 5709522 - 5709432
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    ||||||||||||| ||  |||| |||||||||| |||| | ||||||     |||||| ||||||| ||||||||||||| ||||||||||    
T  5709522 tataaaaatagctaatacaagcatatacataagcgcttataatgatacttgtttgtgctataagcttcaaataagttgttcatccaaacag 5709432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 16145060 - 16145130
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 81  Q
    ||||| || ||||||||||| ||||| |||||  ||||||||||||||| ||||||| || | ||||||||    
T  16145060 ttaacattattttatcattttctatagaaataatttatgtaagcttataaataagtgtttattatgataag 16145130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 30581753 - 30581683
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||  |||| ||||| |||||| ||| |||||| | |||||||||||||||  ||||||||||||||    
T  30581753 agcttatgtataactgcttatcatgaaaagtacttgttctataagctgcaaataaactgtttatccaaaca 30581683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 43230894 - 43230948
Alignment:
Q  73 catgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||| || |||||||| ||||||| |||| || ||||||||||||||||||||    
T  43230894 catgatgagcacttgtgctataagctccaaacaatttgtttatccaaacaggccc 43230948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 46423181 - 46423151
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||||||||||||||||||||||    
T  46423181 ataagctgcaaataagttgtttatccaaaca 46423151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 30582036 - 30582081
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagctt 56  Q
    |||||||| ||||||| ||| ||||||||||| |||||||||||||    
T  30582036 ttaactttattttatctttttctataaaaataccttatgtaagctt 30582081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 121
Target Start/End: Complemental strand, 39906553 - 39906524
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaac 121  Q
    ||||||||||||||||||||||||||||||    
T  39906553 ataagctgcaaataagttgtttatccaaac 39906524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 45975638 - 45975569
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||||| |||| ||||||||||   |||||  ||||||| |||||||| | ||||||||||||||    
T  45975638 ttatacataagggcttatcatgataagtgtttgtgttataagctacaaataagctatttatccaaacagg 45975569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 7069251 - 7069183
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    ||||||||| ||||||||| ||| |||||  ||  |||| |||||||| ||||||| ||||||||||||    
T  7069251 agcttatacttaagtgcttatcacgataaataccagtgctataagctggaaataagctgtttatccaaa 7069183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 9572247 - 9572299
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||| | |||||||| |||||||||||||||||| || || ||||||||    
T  9572247 tcatgataggcacttgtgctataagctgcaaataagttattcattcaaacagg 9572299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 123
Target Start/End: Complemental strand, 10666014 - 10665960
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgc---aaataagttgtttatccaaacag 123  Q
    |||||||||| | |||||| |||||||||   |||||||||||||||||||||||    
T  10666014 tcatgataagcatttgtgctataagctgctgtaaataagttgtttatccaaacag 10665960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Original strand, 14385863 - 14385927
Alignment:
Q  23 tatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttg 87  Q
    |||| |||||||||||||||| || ||  ||||||||||||||  ||| |||||||||| |||||    
T  14385863 tatcttttgctataaaaatagtttctgccagcttatacataagctcttatcatgataagcacttg 14385927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 15609067 - 15609035
Alignment:
Q  18 tgttttatcatttgctataaaaatagcttatgt 50  Q
    ||||||||| |||||||||||||||||||||||    
T  15609067 tgttttatcttttgctataaaaatagcttatgt 15609035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Original strand, 27970432 - 27970460
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaa 120  Q
    |||||||||||||||||||||||||||||    
T  27970432 ataagctgcaaataagttgtttatccaaa 27970460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 37617563 - 37617607
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||| ||||||||||||||| |||||||| |||||| |||||    
T  37617563 cttgtgctataagctgcaaataaattgtttatacaaacatgccct 37617607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 57
Target Start/End: Complemental strand, 38189731 - 38189695
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagctta 57  Q
    |||||| ||||||||| ||||||||||||||||||||    
T  38189731 tttatcttttgctatagaaatagcttatgtaagctta 38189695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 42174829 - 42174785
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    |||||| |||| |||||||||||| |||| |||||||||||||||    
T  42174829 tttatcttttgatataaaaatagcctatgcaagcttatacataag 42174785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 127
Target Start/End: Complemental strand, 45145166 - 45145130
Alignment:
Q  91 aataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||||||||||||| |||||||||| |||||||    
T  45145166 aataagctgcaaataagtagtttatccaatcaggccc 45145130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 104
Target Start/End: Original strand, 49825095 - 49825147
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaat 104  Q
    ||||||||||||| ||| | ||||||||||  |||||||||||||||| ||||    
T  49825095 agcttatacataaatgcatatcatgataagctcttgtgcaataagctgaaaat 49825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 128
Target Start/End: Complemental strand, 49938657 - 49938613
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||| |||||||||| ||||| | ||||||||||||||||||    
T  49938657 cttgtgctataagctgcagataagctttttatccaaacaggccct 49938613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 1058162 - 1058279
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||  ||||  ||||||| |||||||||||||||| ||    
T  1058162 ttaactttattttatgatttgctataaaaatagcttatgtaagcttatacataagcgcttatcatagtaagcgcttgtgctataagctgcaaataagctg 1058261  T
Q  111 tttatccaaacaggccct 128  Q
    ||||| ||||||||||||    
T  1058262 tttattcaaacaggccct 1058279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 34 - 130
Target Start/End: Original strand, 14956406 - 14956502
Alignment:
Q  34 ataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||||||||||| |||||||||||||||||||| ||||||||||   |||||| ||||||||||||||||||||||||||||||| |||||||    
T  14956406 ataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcgattgtgctataagctgcaaataagttgtttatccaaacaagccctta 14956502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 36963442 - 36963553
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||||||| | |||||||||| | |||||||| | |||| | || ||||||||||  ||||||| ||||||||||||||| ||||||| ||||    
T  36963442 ttttatcttttgctagagaaatagcttaagaaagcttatccgtaagcgtttatcatgataagcgcttgtgctataagctgcaaataaattgtttacccaa 36963541  T
Q  120 acaggcccttaa 131  Q
    |||| |||||||    
T  36963542 acagacccttaa 36963553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 11 - 123
Target Start/End: Complemental strand, 12976195 - 12976086
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||  ||||||||| ||||||||||||| |||||||||||||| |||| ||||||| ||  | |||||    ||||||||||||| ||    
T  12976195 ttaactttattttatattttgctatagaaatagcttatgtgagcttatacataagcgcttatcatgatgagtgcctgtgc---tagctgcaaataagctg 12976099  T
Q  111 tttatccaaacag 123  Q
    |||||||||||||    
T  12976098 tttatccaaacag 12976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 38750319 - 38750229
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||||||||  | ||| |   ||||| |||||||||||||||||||||||    
T  38750319 ctataaaaatagcttatgcaagcttatacataagcgcttatcatgataagtgcatgtacttcaagcttcaaataagttgtttatccaaaca 38750229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 119
Target Start/End: Original strand, 9130409 - 9130506
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||| || |||| ||||||||||||||  |||||||||||||||| || ||||||| |  |||||||| |||||||||||||||| | |||||||||    
T  9130409 ttatctttagctacaaaaatagcttatgcgagcttatacataagtgattatcatgatgaccacttgtgctataagctgcaaataagctatttatccaa 9130506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 35534699 - 35534813
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| ||| ||||||||||| ||||||||||||||| |||| | |||| | |||||||   | ||||| |||||||||||||||| ||    
T  35534699 ttaactttattttatctttt-ctataaaaatatcttatgtaagcttatgcata-gcgcttataatgataaacgcctgtgctataagctgcaaataagctg 35534796  T
Q  111 tttatccaaacaggccc 127  Q
    ||| |||||||||||||    
T  35534797 tttttccaaacaggccc 35534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 41821528 - 41821425
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||| ||| |||||| || ||| || | |||||||||||||||||||| |||||||||| ||||||||  ||||||||||||||| |||| |  |||||    
T  41821528 ttatctttttctataataacagcgtacgcaagcttatacataagtgcttatcatgataagcacttgtgc--taagctgcaaataagctgttaagtcaaac 41821431  T
Q  122 aggccc 127  Q
    ||||||    
T  41821430 aggccc 41821425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 29168149 - 29168250
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||||||||| ||||||||||||| ||||||||||||||  ||| | |||||||   ||||||| |||||||||| ||||  ||| |||||||    
T  29168149 ttttatcttttgctatagaaatagcttatgtgagcttatacataagcacttttgatgataaacgcttgtgctataagctgcagataacctgtgtatccaa 29168248  T
Q  120 ac 121  Q
    ||    
T  29168249 ac 29168250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 123
Target Start/End: Complemental strand, 32976033 - 32975930
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||  ||| |||| ||||   |||||||  ||||||| |||| | ||||||||| ||    
T  32976033 ttttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcataataactgcttgtgctctaagctgaaaatcacttgtttatctaa 32975934  T
Q  120 acag 123  Q
    ||||    
T  32975933 acag 32975930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 99
Target Start/End: Original strand, 42043442 - 42043521
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 99  Q
    ||||||| ||||||||| ||||||| ||||||||||||||||||||||||| || | ||||| | |||||  ||||||||    
T  42043442 ttttatcttttgctatagaaatagcatatgtaagcttatacataagtgcttatcgtaataagcagttgtgacataagctg 42043521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 40637407 - 40637486
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||||||||||||||    |||||| |||||||||| | |||||||| |||| ||| |||||||||||||||||| ||||||    
T  40637407 tataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatgctataagctgcaaataagttttttatc 40637486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 12497319 - 12497372
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 64  Q
    |||||||| ||||||| |||||||||||||| ||||||| ||||||||||||||    
T  12497319 ttaactttattttatcttttgctataaaaatggcttatgcaagcttatacataa 12497372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 101
Target Start/End: Complemental strand, 38353322 - 38353242
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgca 101  Q
    ||||||| ||||| |||||||||||||||| ||||||||||||||| | || |||||||||| ||||||   ||||||||||    
T  38353322 ttttatcttttgc-ataaaaatagcttatgcaagcttatacataagcgattatcatgataagcacttgtaatataagctgca 38353242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 26215447 - 26215375
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||| |||| |||| |||||  || |||| |||||||| ||||||||||||||| ||||||||    
T  26215447 agcttatacataagcgcttatcattataagcgctcgtgctataagctgaaaataagttgtttatacaaacagg 26215375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 72 - 128
Target Start/End: Original strand, 29819029 - 29819085
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||||||  ||| ||| |||||||||||||||||||||||||||||||| ||||    
T  29819029 tcatgataagcccttttgctataagctgcaaataagttgtttatccaaacagaccct 29819085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 66 - 130
Target Start/End: Complemental strand, 40981057 - 40980993
Alignment:
Q  66 tgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||| ||| ||||||  ||||||| |||||||||||||||| |||||||||||||||| |||||    
T  40981057 tgcttatcaagataagcgcttgtgctataagctgcaaataagctgtttatccaaacagggcctta 40980993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 116
Target Start/End: Original strand, 10628183 - 10628267
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    ||||||||||||||||||||||    |||||| ||||||| || | |||||||| |||| ||  |||||||||||||||||| ||||||    
T  10628183 tttgctataaaaatagcttatg----cttataaataagtgtttattatgataagcacttatgttataagctgcaaataagttttttatc 10628267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 129
Target Start/End: Complemental strand, 15180512 - 15180406
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||| |||||| || ||||| |||||| || |||||| |||||| ||  |||||||| |  ||||||| ||||||| ||||||||||||||||| |||     
T  15180512 ttatcttttgctgtacaaataacttatgcaaacttatagataagttctcatcatgatacgcgcttgtgctataagcttcaaataagttgtttatctaaa- 15180414  T
Q  122 aggccctt 129  Q
    ||||||||    
T  15180413 aggccctt 15180406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 128
Target Start/End: Complemental strand, 18133586 - 18133551
Alignment:
Q  93 taagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||||||||||||||||||||||||||||||||    
T  18133586 taagctgcaaataagttgtttatccaaacaggccct 18133551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 28 - 127
Target Start/End: Complemental strand, 28763338 - 28763239
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||||||||| ||||  ||| ||||||||| | ||| ||||||||||   || ||| ||||| | |||||||| ||||||| |||||||||||    
T  28763338 tttgctataaaaatagcctatgccagcatatacataaattcttatcatgataagtgtttatgctataagttacaaataagctgtttatacaaacaggccc 28763239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 53 - 124
Target Start/End: Complemental strand, 34236112 - 34236041
Alignment:
Q  53 gcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||| |||||| |||| |||||||||    |||||  |||||||||||||||||||||||||||||||||    
T  34236112 gcttatccataagggcttatcatgataaccgtttgtgttataagctgcaaataagttgtttatccaaacagg 34236041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 11861789 - 11861728
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    |||||||| |||| |  ||||||||| ||||||||||||| |||||||||||||||| ||||    
T  11861789 ttaactttattttgttctttgctatagaaatagcttatgtgagcttatacataagtgtttgt 11861728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 121
Target Start/End: Original strand, 41475179 - 41475248
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||||||||||||||||| |||||| |||   ||||   ||||| ||||||||||||||||||||||||    
T  41475179 agcttatacataagtgcttatcatgacaagtgtttgtcttataagttgcaaataagttgtttatccaaac 41475248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 40859837 - 40859885
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 100  Q
    |||||||||||||| |||| |||||||||| |||||||| |||||||||    
T  40859837 agcttatacataagcgcttatcatgataagcacttgtgctataagctgc 40859885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 2840310 - 2840239
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc-aaataagttgtttatccaaaca 122  Q
    ||||||| ||||||  ||| |||||||||| |||| ||| ||||||||| ||||||||||||||| ||||||    
T  2840310 agcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2840239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 2844997 - 2844926
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc-aaataagttgtttatccaaaca 122  Q
    ||||||| ||||||  ||| |||||||||| |||| ||| ||||||||| ||||||||||||||| ||||||    
T  2844997 agcttattcataagcacttatcatgataagcacttatgctataagctgcaaaataagttgtttatacaaaca 2844926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 72 - 119
Target Start/End: Original strand, 9956951 - 9956998
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||||||  ||||||| ||||||| ||||||||||||||||||||    
T  9956951 tcatgataagtgcttgtgctataagctacaaataagttgtttatccaa 9956998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 30251539 - 30251598
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    |||||| ||||| | ||||||||  ||||||||| ||||| |||||||||||||||||||    
T  30251539 aactttattttaacttttgctatcgaaatagcttgtgtaaccttatacataagtgcttgt 30251598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 900821 - 900887
Alignment:
Q  58 tacataagtgcttgtcatgataagaacttgtgcaataagctgcaaata-agttgtttatccaaacag 123  Q
    |||||||||| || ||||||||||   |||||| ||||| |||||||| ||||||||||||||||||    
T  900821 tacataagtgtttatcatgataagcgtttgtgctataagatgcaaatatagttgtttatccaaacag 900887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 10758344 - 10758414
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 81  Q
    |||||||| |||||| |||||||||| |||||| ||| || |||||||||||||   ||| ||||||||||    
T  10758344 ttaactttattttatgatttgctatagaaatagtttacgtgagcttatacataatcacttatcatgataag 10758414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 25930642 - 25930696
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    |||| ||| ||| ||| ||| ||||| ||||||||||||||||||||||||||||    
T  25930642 ttaattttatttcatcctttcctatagaaatagcttatgtaagcttatacataag 25930696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 27752463 - 27752433
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||||||||||||||||||||||    
T  27752463 ataagctgcaaataagttgtttatccaaaca 27752433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 37353373 - 37353439
Alignment:
Q  58 tacataagtgcttgtcatgataagaacttgtgcaataagctgcaaat-aagttgtttatccaaacag 123  Q
    |||||||| |||| |||| ||||| | || ||| ||||||||||||| |||||||||||||||||||    
T  37353373 tacataagcgcttatcatcataagcatttatgctataagctgcaaatcaagttgtttatccaaacag 37353439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 16825625 - 16825686
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    ||||| || ||||||| ||| |||||| ||||||||||| ||| ||||||||||| ||||||    
T  16825625 ttaacattattttatcctttactataagaatagcttatgcaaggttatacataagcgcttgt 16825686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 129
Target Start/End: Complemental strand, 4389873 - 4389817
Alignment:
Q  74 atgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacaggccctt 129  Q
    |||||||| |||| ||| |||||||||||| |||||| |||||||||||||| ||||    
T  4389873 atgataagcacttctgctataagctgcaaaataagttatttatccaaacagggcctt 4389817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Complemental strand, 5404568 - 5404500
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||||| | ||||| || |||||||||| |||| | |  ||| ||||||||||||||||||||||||    
T  5404568 agcttatatacaagtggttatcatgataagcacttattctttaatctgcaaataagttgtttatccaaa 5404500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 22790541 - 22790509
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||| ||||||||||||||||||||||||    
T  22790541 ataagctgtaaataagttgtttatccaaacagg 22790509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 27028799 - 27028751
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 81  Q
    |||||||||| |||||||||||||||||| |||  ||| ||||||||||    
T  27028799 tataaaaataacttatgtaagcttatacaaaagcacttatcatgataag 27028751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 128
Target Start/End: Original strand, 31716392 - 31716424
Alignment:
Q  96 gctgcaaataagttgtttatccaaacaggccct 128  Q
    |||||||||||||||||||||| ||||||||||    
T  31716392 gctgcaaataagttgtttatcctaacaggccct 31716424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 128
Target Start/End: Complemental strand, 41589625 - 41589555
Alignment:
Q  61 ataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagt---tgtttatccaaacaggccct 128  Q
    ||||| |||| |||||||||   ||||||| |||||||||||||||||   | ||||||||||||||||||    
T  41589625 ataagcgcttatcatgataaatgcttgtgctataagctgcaaataagtttatttttatccaaacaggccct 41589555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 64
Target Start/End: Complemental strand, 42052018 - 42051982
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataa 64  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  42052018 tttgctataaaaagagcttatgcaagcttatacataa 42051982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 30956714 - 30956834
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||  ||||||| |||||||||||||||| ||    
T  30956714 ttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaaataagctg 30956813  T
Q  111 tttatccaaacaggcccttaa 131  Q
    |||||||||||| | ||||||    
T  30956814 tttatccaaacatgaccttaa 30956834  T

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Target: chr3; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 30972526 - 30972646
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| ||||||||| ||||||||||||||||||||| ||||| ||||| ||||||||||  ||||||| |||||||||||||||| ||    
T  30972526 ttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaaataagctg 30972625  T
Q  111 tttatccaaacaggcccttaa 131  Q
    |||||||||||| | ||||||    
T  30972626 tttatccaaacatgaccttaa 30972646  T

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Target: chr3; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 20880453 - 20880343
Alignment:
Q  17 ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||| | |||||||   ||||||| |||| ||||||||||||||| ||||    
T  20880453 ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagcacttattatgataaccgcttgtgctataaactgcaaataagttgtctatc 20880354  T
Q  117 caaacaggccc 127  Q
    |||||||||||    
T  20880353 caaacaggccc 20880343  T

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Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 35959544 - 35959660
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| ||| ||||| ||||||||||||| ||||||||||||||  ||| ||||||||||| ||||||  |||||||||||||||| ||    
T  35959544 ttaactttattttatccttttctatagaaatagcttatgtgagcttatacataagctcttatcatgataagagcttgtgatataagctgcaaataagctg 35959643  T
Q  111 tttatccaaacaggccc 127  Q
    |||||||||||| ||||    
T  35959644 tttatccaaacaagccc 35959660  T

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Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 31365391 - 31365478
Alignment:
Q  42 agcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctt 129  Q
    |||||||| |||||||||||||||||||| |||||||||  |||||||| |||||||||||||||| |||||||||| ||||| ||||    
T  31365391 agcttatgcaagcttatacataagtgcttatcatgataatcacttgtgctataagctgcaaataagctgtttatccacacaggtcctt 31365478  T

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Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 53789570 - 53789669
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    ||||| |||||||||||||||||||| |||||||||||| ||||||||||  ||||||  ||||||||||| ||||| ||||| ||||||||| ||||||    
T  53789570 ctatagaaatagcttatgtaagcttacacataagtgcttatcatgataagcgcttgtggcataagctgcaattaagtcgtttacccaaacagggccttaa 53789669  T

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Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 128
Target Start/End: Original strand, 24684920 - 24685028
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||| ||||||||||||||||||||| ||||| || ||| |||| ||||||| |||| |||||| |||||||||||||||   || |||||||    
T  24684920 ttttatctttttctataaaaatagcttatgtaaacttatgcaaaagcgcttatcatgatgagaatttgtgctataagctgcaaataaaccgtctatccaa 24685019  T
Q  120 acaggccct 128  Q
    |||||||||    
T  24685020 acaggccct 24685028  T

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Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 121
Target Start/End: Original strand, 1508677 - 1508779
Alignment:
Q  20 ttttatcatttgctataaaaa-tagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatcca 118  Q
    ||||||| |||||| |||||| ||| ||||| ||||||||||||||| |||| |||||||||| |||||||| ||||| |||||||||| ||||| ||||    
T  1508677 ttttatcttttgctttaaaaaatagtttatgcaagcttatacataagcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttcca 1508776  T
Q  119 aac 121  Q
    |||    
T  1508777 aac 1508779  T

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Target: chr3; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 123
Target Start/End: Complemental strand, 944459 - 944363
Alignment:
Q  29 ttgctataaaaatagcttatgtaagcttatacataagt-gcttgtcatgataagaactt-gtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    |||||| |||||||||||||| |||||||||| ||||  |||| |||||||||| |||| |||  ||||||||||||||||||||||||||||||||    
T  944459 ttgctacaaaaatagcttatgcaagcttatacgtaagccgcttatcatgataagcacttagtgttataagctgcaaataagttgtttatccaaacag 944363  T

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Target: chr3; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 20170505 - 20170389
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| || ||||||| |||||  |||||||||||| || ||||| ||||||||| |||| |||||| ||| | |||||  |||| ||||||||||||||    
T  20170505 ttaacattattttatcttttgcagtaaaaatagcttgtgcaagctgatacataagcgcttatcatgaaaagcagttgtgatataaactgcaaataagttg 20170406  T
Q  111 tttatccaaacaggccc 127  Q
    ||| ||| |||||||||    
T  20170405 tttctcccaacaggccc 20170389  T

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Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 14 - 121
Target Start/End: Complemental strand, 2719448 - 2719341
Alignment:
Q  14 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 113  Q
    ||||| ||||||  |||||| || ||||||||| ||||||||||| | ||||||||| ||||||||||   |||||| |||||||| ||||||| |||||    
T  2719448 actttattttatattttgctttagaaatagcttgtgtaagcttatgcgtaagtgcttatcatgataagcgtttgtgctataagctgtaaataagctgttt 2719349  T
Q  114 atccaaac 121  Q
    || |||||    
T  2719348 attcaaac 2719341  T

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Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 131
Target Start/End: Complemental strand, 19983752 - 19983642
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||| ||| ||||| ||||| |||||||||||||||||||||  |||| |||| ||||  | || ||| ||||  |||||||||||||||||||||||    
T  19983752 tttatctttttctatagaaataacttatgtaagcttatacataaacgcttatcataataaacaattatgctataaattgcaaataagttgtttatccaaa 19983653  T
Q  121 caggcccttaa 131  Q
     || |||||||    
T  19983652 gagacccttaa 19983642  T

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Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 34235195 - 34235265
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||| ||||||||||||| |||||||||| || ||| | ||||||| |||||||||||||||||||||||    
T  34235195 agcttctacataagtgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaaaca 34235265  T

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Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 46778315 - 46778413
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    |||||||| |||||||  |||||||| ||||||||||| |||||| ||||||||| |||| ||||||||||   |||| | ||||| ||||||||||||    
T  46778315 ttaactttattttatctcttgctatagaaatagcttatataagctgatacataagcgcttatcatgataagtgtttgtactataaggtgcaaataagtt 46778413  T

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Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 105
Target Start/End: Original strand, 12862344 - 12862429
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaata 105  Q
    ||||||| |||||||||||||||| ||||| ||||||| |||||||||||| |||| |||||  ||| ||| |||| |||||||||    
T  12862344 ttttatcttttgctataaaaatagattatgcaagcttaaacataagtgcttatcattataagcgcttttgctataacctgcaaata 12862429  T

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Target: chr3; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 28795944 - 28796025
Alignment:
Q  35 taaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    ||||||||| ||| ||||||||||||||||||| || |||||||||    |||||| |||||||| ||||||||||||||||    
T  28795944 taaaaatagtttaggtaagcttatacataagtgtttatcatgataaatgtttgtgctataagctgtaaataagttgtttatc 28796025  T

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Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 3845671 - 3845763
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||| |||||||||||||||||||||||| |||  ||| | |  |||||  ||||||| || | ||||||||||||||||||||||||||||    
T  3845671 ctatagaaatagcttatgtaagcttatacaaaagcacttattacaataagtgcttgtgctatgaactgcaaataagttgtttatccaaacagg 3845763  T

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Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 34034104 - 34034036
Alignment:
Q  60 cataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||||||| ||||||||||  | ||| | |||||||| ||||||||||||||||||||||||||||    
T  34034104 cataagtgcttatcatgataagcgcctgttctataagctgaaaataagttgtttatccaaacaggccct 34034036  T

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Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 46886836 - 46886888
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||| |||| ||| |||||||||||||||||||||||||||||||||    
T  46886836 tcatgataagcacttatgctataagctgcaaataagttgtttatccaaacagg 46886888  T

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Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 47132308 - 47132240
Alignment:
Q  62 taagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||||||| ||||||||||  ||||||| ||||| || |||||||||||||||||||||||| |||||    
T  47132308 taagtgcttatcatgataagtgcttgtgctataaggtgaaaataagttgtttatccaaacagggcctta 47132240  T

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Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 12833955 - 12833871
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||||||||||||||||||    ||||||| |||||||||| | |||||||| |||| ||| |||||||||| ||||||| ||||||    
T  12833955 tttgctataaaaatagcttat----gcttataaataagtgcttattatgataagcacttatgctataagctgcatataagttttttatc 12833871  T

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Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 36631139 - 36631250
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||||||  |||||| ||| ||||| |||||||||| |  || |||||||||| ||||| |||||||||| |||||||| ||   ||| ||||||||||    
T  36631139 ttaactttactttatcctttactatagaaatagcttaagcgagtttatacataattgcttatcatgataagcacttgtgctattgtctgaaaataagttg 36631238  T
Q  111 tttatccaaaca 122  Q
    || |||||||||    
T  36631239 ttaatccaaaca 36631250  T

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Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 402660 - 402730
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||||||||  ||| |||||||||| |||||||| || ||||||||||||||||||| | ||||||    
T  402660 agcttatacataagcccttatcatgataagcacttgtgctatgagctgcaaataagttgtttgttcaaaca 402730  T

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Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 29520567 - 29520664
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||| || |||| || |||||||||||| ||||||||| |||||||||||||||||||| | ||||||||   || ||| |||||||||||| |||||    
T  29520567 ttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatgataagtgtttatgctataagctgcaaaaaagtt 29520664  T

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Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 39980692 - 39980610
Alignment:
Q  30 tgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    ||||||||||| |||| ||| || ||||||||||||||||| ||||||||||   |||| | |||||||||||||||| ||||    
T  39980692 tgctataaaaaaagctaatgcaaacttatacataagtgcttatcatgataagtgtttgtcctataagctgcaaataagctgtt 39980610  T

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Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 7814244 - 7814321
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||||||||||||||||||||    |||||| |||||||||| | |||||||| |||| | | ||||||||||||||||||    
T  7814244 tttgctataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 7814321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 124
Target Start/End: Complemental strand, 849590 - 849551
Alignment:
Q  85 ttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||| |||||||||||||||||||||||||||||||||    
T  849590 ttgtgctataagctgcaaataagttgtttatccaaacagg 849551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 20257497 - 20257422
Alignment:
Q  56 tatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    |||||||||| |||| || ||||||   ||||||  ||||||||||||||| ||||| ||||||||||||||||||    
T  20257497 tatacataagcgcttatcgtgataaagtcttgtgttataagctgcaaataaattgttaatccaaacaggcccttaa 20257422  T

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Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 584028 - 583974
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    |||||||| ||||||||||| ||||| ||||| ||||||||||||||||| ||||    
T  584028 ttaactttattttatcattttctatagaaataacttatgtaagcttatacgtaag 583974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 109
Target Start/End: Complemental strand, 5331275 - 5331178
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||| || |||| || |||||||||||| ||||||||| |||||||||||||||||||| | || |||||   || ||| |||||||||||| |||||    
T  5331275 ttaacgttattttctcttttgctataaaa-tagcttatgcaagcttatacataagtgcttattatcataagtgtttatgctataagctgcaaaaaagtt 5331178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 99
Target Start/End: Complemental strand, 30443720 - 30443658
Alignment:
Q  37 aaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 99  Q
    ||||| ||||||||||||| || ||||| ||||| |||||||||| |||||||| ||||||||    
T  30443720 aaaattgcttatgtaagctcatgcataattgcttatcatgataagcacttgtgctataagctg 30443658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 139794 - 139875
Alignment:
Q  44 cttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggc 125  Q
    ||||||||||||||| |||||| |||| ||||||||||  | ||  | ||||||| |||||||||||  |||||||||||||    
T  139794 cttatgtaagcttatgcataagcgcttatcatgataagtgcctgcactataagctccaaataagttgcgtatccaaacaggc 139875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 131
Target Start/End: Complemental strand, 466157 - 466062
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaata--agctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    |||||| |||||||||||||| |||||| |||| |||| |||||  ||||| | |||  |||| |||||||| |||| ||||||||||| ||||||    
T  466157 aaatagattatgtaagcttatgcataagagcttatcataataagtgcttgtactatattagctacaaataaggtgttaatccaaacagggccttaa 466062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 31403309 - 31403237
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||| |||||||||| | |||||||| ||||| || | || ||||||||||  ||||||||||||||||    
T  31403309 agcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctgtttatccaaacagg 31403237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 39602337 - 39602373
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggccct 128  Q
    |||||||||||||||||||||||||||| ||||||||    
T  39602337 ataagctgcaaataagttgtttatccaatcaggccct 39602373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 103
Target Start/End: Complemental strand, 40665380 - 40665329
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa 103  Q
    ||||| |||| |||||||| ||||||||||||||| ||| ||||||||||||    
T  40665380 agcttgtacagaagtgcttatcatgataagaacttatgctataagctgcaaa 40665329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 7301320 - 7301266
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||||||||||| ||| ||||||||| |||| ||||||| || |||||||||    
T  7301320 ttaactttgttttattattagctataaaattagcatatgtaaactcatacataag 7301266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 58
Target Start/End: Original strand, 10704670 - 10704708
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttat 58  Q
    ||||||| |||||||||||| ||||||||||||||||||    
T  10704670 ttttatcttttgctataaaagtagcttatgtaagcttat 10704708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 70
Target Start/End: Original strand, 18405929 - 18405979
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgctt 70  Q
    ||||||| ||| ||||| ||||| |||||||||||||||||||||| ||||    
T  18405929 ttttatcttttcctatataaataacttatgtaagcttatacataagcgctt 18405979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 20003433 - 20003483
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||| ||| |||| ||||||| |||||||||||||| ||||||||    
T  20003433 tcatgataagcactcgtgctataagctacaaataagttgtttctccaaaca 20003483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 26990607 - 26990681
Alignment:
Q  50 taagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||| ||||||||||| ||||  ||||  ||||||  ||||| |||| |||||||||| |||||||||||    
T  26990607 taagcttattcataagtgcttatcattgtaagtgcttgtgttataagttgcatataagttgttgatccaaacagg 26990681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 29002961 - 29003031
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||| || |||||||||   ||| | | ||||||||||||||| || ||||||||||||||    
T  29002961 cttatacataagtgtttatcatgataaacgcttttactataagctgcaaataaattatttatccaaacagg 29003031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 125
Target Start/End: Original strand, 10704708 - 10704745
Alignment:
Q  88 tgcaataagctgcaaataagttgtttatccaaacaggc 125  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  10704708 tgcattaagctgcaaataagctgtttatccaaacaggc 10704745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 107
Target Start/End: Complemental strand, 23816002 - 23815949
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataag 107  Q
    ||||||||||||||||| |||||||||| ||||  || ||||| ||||||||||    
T  23816002 cttatacataagtgcttatcatgataagcactttggctataagatgcaaataag 23815949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 121
Target Start/End: Original strand, 24085485 - 24085513
Alignment:
Q  93 taagctgcaaataagttgtttatccaaac 121  Q
    |||||||||||||||||||||||||||||    
T  24085485 taagctgcaaataagttgtttatccaaac 24085513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 28240257 - 28240213
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    ||||||||||  ||||||| |||||||||| ||||||||||||||    
T  28240257 tcatgataagcgcttgtgctataagctgcagataagttgtttatc 28240213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 120
Target Start/End: Original strand, 34610945 - 34610993
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    ||||||||||  ||||||  |||||||||| ||||||||||||||||||    
T  34610945 tcatgataagcgcttgtgttataagctgcagataagttgtttatccaaa 34610993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 122
Target Start/End: Original strand, 35328288 - 35328351
Alignment:
Q  58 tacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||||||| |||| |||||  ||||| | |||||||||||||||| | ||||||||||||    
T  35328288 tacataagtgcttatcataataagcgcttgt-ctataagctgcaaataagctatttatccaaaca 35328351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 120
Target Start/End: Original strand, 36507241 - 36507277
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    ||||||| ||||||||||||||||||||| |||||||    
T  36507241 cttgtgctataagctgcaaataagttgttcatccaaa 36507277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 37689211 - 37689147
Alignment:
Q  15 ctttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgata 79  Q
    |||| ||||||| ||||||||| ||||||||||||| | ||||||| ||||  ||| ||||||||    
T  37689211 ctttattttatcttttgctatagaaatagcttatgtgaacttatacgtaagcacttatcatgata 37689147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 127
Target Start/End: Original strand, 42800032 - 42800117
Alignment:
Q  40 atagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||| |||||||||  || |||||  |||||||||  ||| ||| ||||||| |||||||| |||| ||||||||| ||||    
T  42800032 atagcttatgtgagcttatac--aaatgcttaacatgataagcgcttctgctataagctacaaataagctgttaatccaaacatgccc 42800117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 11 - 124
Target Start/End: Complemental strand, 41407283 - 41407170
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| |||| || | ||||||||||||||||||||||||||||||||| ||||||||||  ||||||| |||||||||||| ||| ||    
T  41407283 ttaactttattttatcttttggtacagaaatagcttatgtaagcttatacataagtgcttatcatgataagcgcttgtgctataagctgcaaacaagctg 41407184  T
Q  111 tttatccaaacagg 124  Q
    ||||||||||||||    
T  41407183 tttatccaaacagg 41407170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 14 - 131
Target Start/End: Original strand, 42659242 - 42659359
Alignment:
Q  14 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 113  Q
    ||||| ||||| ||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||    ||||| || |||||||||||||||  ||    
T  42659242 actttattttaccattttccataaaaatagcttatgtaagcttatacataagcgcttatcatgataagtgtgtgtgctattagctgcaaataagtttctt 42659341  T
Q  114 atccaaacaggcccttaa 131  Q
    ||||||||||||||||||    
T  42659342 atccaaacaggcccttaa 42659359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 1633656 - 1633750
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||| ||| |||||||||| | |||||||  ||| |||||||||| |||| ||| |||||||||||||||| |||||||||||||||||||    
T  1633656 tataaaaacagcctatgtaagctcaaacataagatcttatcatgataagcacttctgctataagctgcaaataagctgtttatccaaacaggccc 1633750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 32592569 - 32592463
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| || ||||||| ||| |||||||||||| ||||| ||||||||||||||| |||| | ||||||||   |||||| ||||||| |||||||||||    
T  32592569 ttaacattattttatctttttctataaaaatagtttatgcaagcttatacataagcgcttataatgataagtgtttgtgctataagctacaaataagttg 32592470  T
Q  111 tttatcc 117  Q
    |||||||    
T  32592469 tttatcc 32592463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 131
Target Start/End: Complemental strand, 15305639 - 15305518
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatg-ataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||||||| |||  |||  |||| ||||   ||| ||| | ||| |||||||||| |    
T  15305639 ttaacattattttatcatttgctataaaaatagcttatgcaagcttatacacaagcacttaccatgtataaacgcttatgctaaaagttgcaaataagct 15305540  T
Q  110 gtttatccaaacaggcccttaa 131  Q
    ||||||||||||||||||||||    
T  15305539 gtttatccaaacaggcccttaa 15305518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 12795753 - 12795654
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    |||| ||||||||||||||||||||||  | |||||||| |||||||||| |||| ||| |||| ||||||||||  ||||||||||||| ||| |||||    
T  12795753 ctatcaaaatagcttatgtaagcttatgaaaaagtgcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaaactggctcttaa 12795654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 3312024 - 3311922
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    |||||| |||||||  ||||| |||||| |||||||||| |||||||||||||  ||| |||||||||  |||||||| |||||||| |||||| |||||    
T  3312024 aactttattttatcccttgctgtaaaaacagcttatgtatgcttatacataagcacttttcatgataatcacttgtgctataagctgaaaataatttgtt 3311925  T
Q  113 tat 115  Q
    |||    
T  3311924 tat 3311922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 54 - 124
Target Start/End: Original strand, 39659639 - 39659709
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||| |||| |||||||||| | ||||||  ||||||||||||||||||||||||||||||||    
T  39659639 cttatacataagcgcttatcatgataagcatttgtgctctaagctgcaaataagttgtttatccaaacagg 39659709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 2416262 - 2416194
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||||||  |||  |||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  2416262 cttatacataagcacttaacatgataagaacttgtgctataagctgaaaataagttgtttatccaaaca 2416194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 130
Target Start/End: Complemental strand, 11863886 - 11863794
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||||||||||||||||||| |||||| |||| |||||| |||   ||||||  ||||||| |||||||||||||||||| ||||| |||||    
T  11863886 aaatagcttatgtaagcttatgcataagcgcttatcatgacaagtgtttgtgctgtaagctgaaaataagttgtttatccagacaggtcctta 11863794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 15757747 - 15757869
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagt-------gcttgtcatgataagaacttgtgcaataagctgcaaa 103  Q
    |||||||| ||||||||||| || || | ||||||||||| ||||||||||||||        |||| ||||||||||  ||||||| |||||||| |||    
T  15757747 ttaactttattttatcattttctttagatatagcttatgtgagcttatacataagcttttatcgcttatcatgataagcgcttgtgctataagctgaaaa 15757846  T
Q  104 taagttgtttatccaaacaggcc 126  Q
    |||| ||||||||||||||||||    
T  15757847 taagctgtttatccaaacaggcc 15757869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 33319912 - 33320025
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagc-------tgcaaataagttgttta 114  Q
    ||||||||| |||||||||||| |||||||| ||| |||||||| | || ||| ||||||  ||||||| ||||||       |||||||||||||||||    
T  33319912 ttatcatttactataaaaatagtttatgtaaacttttacataagcgattatcaggataagcgcttgtgctataagctgcaaattgcaaataagttgttta 33320011  T
Q  115 tccaaacaggccct 128  Q
    ||||||||||||||    
T  33320012 tccaaacaggccct 33320025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 23974599 - 23974693
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 126  Q
    |||||||||||||||| |||||||||| ||||||||||| || || | |  |||||||  ||||||| |||||||| || |||||||||||||||    
T  23974599 ctataaaaatagcttaagtaagcttatgcataagtgcttatcttgcttatcacttgtgatataagctccaaataagctgcttatccaaacaggcc 23974693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 13325552 - 13325447
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||||||| |||||||| |||||||||| | || ||||||||||||||  ||||| |||  ||| ||  ||||||| ||||||| |||    
T  13325552 ttaactttattttatcattttctataaaactagcttatgttacctcatacataagtgcttaacatgagaagtgcttttgatataagctccaaataaattg 13325453  T
Q  111 tttatc 116  Q
    ||||||    
T  13325452 tttatc 13325447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 55 - 120
Target Start/End: Complemental strand, 26626824 - 26626759
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    ||||||||||||  || ||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  26626824 ttatacataagtatttatcatgataagagcttatgctataagctgcaaataagttgtttatccaaa 26626759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 41293346 - 41293434
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc--aaataagttgtttatccaaacagg 124  Q
    ||||| |||||||||||||| ||||| | ||||  ||||||| | |||||||| |||||||||  ||||||||||||||||||||||||    
T  41293346 aaataacttatgtaagcttacacatacgcgcttaccatgatacgcacttgtgctataagctgcaaaaataagttgtttatccaaacagg 41293434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 26201993 - 26201925
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataag 96  Q
    |||||||||||||||||||||| ||||||||| ||||| |||| ||||||||||  ||||||| |||||    
T  26201993 tttgctataaaaatagcttatgcaagcttatatataagggcttatcatgataagcgcttgtgctataag 26201925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 38010394 - 38010283
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| || ||||||| |||  |||| ||| | |||| ||||||||| || |||| || | |||||||||| |||||||  |||||||||||||||||||    
T  38010394 ttaacattattttatcttttaatatagaaacaacttacgtaagcttagacgtaagggcatatcatgataagcacttgtgatataagctgcaaataagttg 38010295  T
Q  111 tttatccaaaca 122  Q
    |||||| |||||    
T  38010294 tttatctaaaca 38010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 116
Target Start/End: Original strand, 5599164 - 5599243
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||||||||||||||    |||||| |||||||||| | |||||||| |||| ||| |||||||||||||||||| ||||||    
T  5599164 tataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatgctataagctgcaaataagttttttatc 5599243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 41241220 - 41241305
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataag 96  Q
    |||||||  ||||||| ||| ||||| ||||||||||||||||||||| |||||| || | ||||||||||  ||||||| |||||    
T  41241220 ttaacttcattttatcttttcctatagaaatagcttatgtaagcttatccataagcgcatatcatgataagtgcttgtgctataag 41241305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 41812178 - 41812231
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 64  Q
    |||||||  ||||| ||||||| |||||||||||||||||||||||||||||||    
T  41812178 ttaacttcattttaccatttgccataaaaatagcttatgtaagcttatacataa 41812231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 83 - 128
Target Start/End: Original strand, 41812234 - 41812279
Alignment:
Q  83 acttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||    
T  41812234 acttgtgctataaactgcaaataagttgtttatccaaacaggccct 41812279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 41851517 - 41851408
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| || |||| ||| ||||| ||||| ||  |||||||||||| ||||| | ||  |||||||||  ||||||| ||| |||||||||||| ||    
T  41851517 ttaactttattgtatcttttcctatataaatatctcgtgtaagcttatatataagcgtttagcatgataagcgcttgtgctatatgctgcaaataagatg 41851418  T
Q  111 tttatccaaa 120  Q
    ||||||||||    
T  41851417 tttatccaaa 41851408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 42868549 - 42868634
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataag 96  Q
    |||||||| ||||||| ||| |||| |||||||||||||||| ||||| |||||| || | ||||||||||  ||||||| |||||    
T  42868549 ttaactttattttatctttttctatgaaaatagcttatgtaaacttatgcataagcgcctatcatgataagcgcttgtgctataag 42868634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 12464561 - 12464673
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| ||| ||| | ||||||||||||||||||| |||||| |  ||| ||||||||||  | || |  ||||||| ||||||||  |    
T  12464561 ttaactttattttatctttttctacagaaatagcttatgtaagcttctacatatgcacttatcatgataagtgcgtgcgttataagctacaaataagccg 12464660  T
Q  111 tttatccaaacag 123  Q
    |||||||||||||    
T  12464661 tttatccaaacag 12464673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 19608744 - 19608816
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||||||||||||| ||||| || |  ||||||| |||||||||||||| | ||| ||||||||||||    
T  19608744 agcttatacataagtgcttatcatggtatgtgcttgtgctataagctgcaaatatgctgtatatccaaacagg 19608816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 28792329 - 28792401
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||||| |||| |||||| |  ||||||| ||||||||||| |||| | ||||||||||||||    
T  28792329 agcttatacataagtgattgtaatgataggtgcttgtgctataagctgcaagtaagctttttatccaaacagg 28792401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 31561841 - 31561929
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 99  Q
    |||||||| |||||||||||  |||| | ||||||||||||||||||||  |||| |||| |||||||||   ||||||| ||||||||    
T  31561841 ttaactttattttatcatttattatagatatagcttatgtaagcttatatgtaagcgcttatcatgataaacgcttgtgctataagctg 31561929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 124
Target Start/End: Complemental strand, 4606911 - 4606860
Alignment:
Q  73 catgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||| |||||||  ||||||||| |||||||||||||||||||||||    
T  4606911 catgataagcacttgtgttataagctgcgaataagttgtttatccaaacagg 4606860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 45229485 - 45229440
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  45229485 ttttatcgtttgctatagaaatagcttatgtaaacttatacataag 45229440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 7043881 - 7043913
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||||||||||||||||||||||    
T  7043881 ataagctgcaaataagttgtttatccaaacagg 7043913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 9395079 - 9395011
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||| |||| || ||||||||||| ||||||| |||||| ||||||||| | | ||||||||||    
T  9395079 cttatacatgagtgtttatcatgataagagcttgtgctataagccgcaaataagctatgtatccaaaca 9395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 26143760 - 26143831
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||| |||||||  ||||| ||||  ||||||  |||| ||||||||||||||||||||||||||||    
T  26143760 agcttatacacaagtgcta-tcatggtaagtgcttgtgttataaactgcaaataagttgtttatccaaacagg 26143831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 40682492 - 40682564
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||| ||||  |||||||||  |||| || || || |||||||||| ||||||||||||||||    
T  40682492 agcttatacataagcgcttaccatgataagcgcttgcgctatgagttgcaaataagatgtttatccaaacagg 40682564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 122
Target Start/End: Complemental strand, 40835471 - 40835435
Alignment:
Q  86 tgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||| |||||||||||||||||||||||||||||||    
T  40835471 tgtgctataagctgcaaataagttgtttatccaaaca 40835435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 124
Target Start/End: Original strand, 41880642 - 41880694
Alignment:
Q  73 catgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacagg 124  Q
    |||||||||  ||||||| |||||||||||| |||||||||||||||||||||    
T  41880642 catgataagcgcttgtgctataagctgcaaagtaagttgtttatccaaacagg 41880694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 123
Target Start/End: Complemental strand, 9174725 - 9174694
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacag 123  Q
    ||||||||||||||||||||||||||||||||    
T  9174725 ataagctgcaaataagttgtttatccaaacag 9174694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 31744325 - 31744237
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||| |||||| |||| | ||||||||||||||| |||| ||||  ||||  ||||||| ||||||| |||||||| |||||| |||||||    
T  31744325 ctatgaaaataacttacgcaagcttatacataagcgcttatcat--taagtgcttgtgctataagctacaaataagctgtttaaccaaaca 31744237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 83 - 122
Target Start/End: Complemental strand, 40279121 - 40279082
Alignment:
Q  83 acttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  40279121 acttgtgctataagctacaaataagttgtttatccaaaca 40279082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 43570352 - 43570297
Alignment:
Q  67 gcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||| ||||||||||  ||||||| |||||||||||||||| |||||| |||||||    
T  43570352 gcttatcatgataagtgcttgtgctataagctgcaaataagctgtttacccaaaca 43570297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 66 - 120
Target Start/End: Original strand, 27695730 - 27695784
Alignment:
Q  66 tgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    ||||| ||||||||||   |||||| ||||||| |||||||||||||||||||||    
T  27695730 tgcttatcatgataagtgtttgtgctataagctacaaataagttgtttatccaaa 27695784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 126
Target Start/End: Complemental strand, 43036541 - 43036507
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggcc 126  Q
    |||||| ||||||||||||||||||||||||||||    
T  43036541 ataagcggcaaataagttgtttatccaaacaggcc 43036507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 4026799 - 4026762
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttat 48  Q
    |||||||| ||||||| |||||||||||||||||||||    
T  4026799 ttaactttattttatcttttgctataaaaatagcttat 4026762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 92
Target Start/End: Complemental strand, 12038024 - 12037971
Alignment:
Q  39 aatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaa 92  Q
    ||||||||||| ||| |||||||||||||||| |||| ||||| |||| |||||    
T  12038024 aatagcttatggaagattatacataagtgcttatcattataagcacttctgcaa 12037971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 22971606 - 22971674
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa 80  Q
    |||||||| ||||||| ||| ||||| ||||||||||| |||||||||||| ||| |||| |||| ||||    
T  22971606 ttaactttattttatctttt-ctatagaaatagcttatataagcttatacacaagcgcttatcataataa 22971674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 127
Target Start/End: Original strand, 28330414 - 28330502
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||   |||||||| |||| | |||| ||||||||||  ||||||| ||||| |  ||| |||||||||||||||||||||||    
T  28330414 aaatagcttacacaagcttatgcatatgcgcttatcatgataagtgcttgtgctataagtttaaaa-aagttgtttatccaaacaggccc 28330502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 39567852 - 39567775
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctg-caaataagttgtttatccaaacaggccctta 130  Q
    |||||||| |||||||| ||||||||||  ||| ||||||||||||  || |||| ||||||||||||| || |||||    
T  39567852 cttatacacaagtgcttatcatgataagcgcttatgcaataagctgtgaattaagctgtttatccaaaccgggcctta 39567775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 42457896 - 42457827
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||| ||||| |||||||| |  ||||||| ||||||  ||||||||| ||| |||||||||||    
T  42457896 ttatacataaatgcttatcatgataggcgcttgtgctataagccacaaataagtggttaatccaaacagg 42457827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 77
Target Start/End: Complemental strand, 10258656 - 10258592
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatga 77  Q
    |||||| ||||||||||| | | |||| || ||||||||| ||||||||||||  ||||||||||    
T  10258656 aactttattttatcatttcccacaaaactaccttatgtaaccttatacataagcacttgtcatga 10258592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 10619303 - 10619343
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgta 51  Q
    |||||||||||||||| ||| |||||||||||||| |||||    
T  10619303 ttaactttgttttatctttttctataaaaatagctaatgta 10619343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 76 - 124
Target Start/End: Complemental strand, 12194869 - 12194821
Alignment:
Q  76 gataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||| |||||||| |||||||  |||||||||||||| |||||||||    
T  12194869 gataagcacttgtgctataagctataaataagttgtttaaccaaacagg 12194821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 21827983 - 21827947
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||||||||||||||||||||  |||||||||||    
T  21827983 ataagctgcaaataagttgtttatataaacaggccct 21827947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 123
Target Start/End: Complemental strand, 36534736 - 36534668
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    ||||||| |||  ||| |||||||||| |||| ||  |||| ||| |||||||||||||||||||||||    
T  36534736 ttatacacaagcacttatcatgataagcacttatgttataaactgaaaataagttgtttatccaaacag 36534668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 41449819 - 41449791
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaa 120  Q
    |||||||||||||||||||||||||||||    
T  41449819 ataagctgcaaataagttgtttatccaaa 41449791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 5e-31; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 123
Target Start/End: Original strand, 21568728 - 21568828
Alignment:
Q  23 tatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||| ||| |||||||||||| ||| ||||||||||||||    
T  21568728 tatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaaaca 21568827  T
Q  123 g 123  Q
    |    
T  21568828 g 21568828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 131
Target Start/End: Complemental strand, 5947137 - 5947023
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    ||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||||| | |||||||||    |||||| ||||||| |||||||| | ||    
T  5947137 aactttgttttataatttgctattaaaatagtttatctaagcttatacataagtgcctatcatgataa----ttgtgctataagcttcaaataagctatt 5947042  T
Q  113 tatccaaacaggcccttaa 131  Q
    |||||||||||||||||||    
T  5947041 tatccaaacaggcccttaa 5947023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 132
Target Start/End: Complemental strand, 46078129 - 46078008
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||||| |||| |||||||| |   ||||||  |||| |||| ||||| ||    
T  46078129 ttaactttgttttatctttttctataaaaataacttatgtaagcttatacataagcgcttatcatgatatgtgtttgtgctttaagttgcatataagctg 46078030  T
Q  111 tttatccaaacaggcccttaac 132  Q
    ||| ||||||||||||||||||    
T  46078029 tttgtccaaacaggcccttaac 46078008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 36 - 127
Target Start/End: Complemental strand, 45264050 - 45263959
Alignment:
Q  36 aaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||||||||||||||| | |||| |||| ||||||||||  ||||||  |||||| |||||||||||||||||||||||||||||    
T  45264050 aaaaatagcttatgtaagcttatgcgtaagcgcttttcatgataagcgcttgtgtgataagccgcaaataagttgtttatccaaacaggccc 45263959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 131
Target Start/End: Original strand, 4970885 - 4970996
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||  |||| ||||| || | |||| | | ||||||||||||||||  ||||||||||    
T  4970885 ttttatcttttgctatagaaatagcttatgtaagcttatacataaccgcttatcatggtagggactttttctataagctgcaaataagccgtttatccaa 4970984  T
Q  120 acaggcccttaa 131  Q
    | ||| ||||||    
T  4970985 agaggtccttaa 4970996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 128
Target Start/End: Complemental strand, 9210589 - 9210493
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    |||||||| ||||||||| ||||||||||||||| | || |||||||||    ||| || |||||||||||||||| ||||||||||||||||||||    
T  9210589 ctataaaagtagcttatgcaagcttatacataagcgattatcatgataaatgtttgcgctataagctgcaaataagctgtttatccaaacaggccct 9210493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 33128739 - 33128623
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| |||||||  || ||||||||||| | || |||||||||| ||||||  ||| ||||||||||   ||||||  ||||||||||||||| ||    
T  33128739 ttaactttattttatctctttctataaaaataacgtaagtaagcttatgcataagcacttatcatgataagtgtttgtgctgtaagctgcaaataagctg 33128640  T
Q  111 tttatccaaacaggccc 127  Q
    |||||||||||||||||    
T  33128639 tttatccaaacaggccc 33128623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 119
Target Start/End: Original strand, 33552940 - 33553007
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    |||||||||||||| |||| ||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  33552940 agcttatacataagcgcttatcatggtaagtgcttgtgcaataagctgcaaataagttgtttatccaa 33553007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 12 - 127
Target Start/End: Original strand, 38500007 - 38500122
Alignment:
Q  12 taactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgt 111  Q
    ||||||| || |||||||| | | ||||||| ||| ||||| | |||||||||| |||| ||||||||||  ||||||| |||| ||||||||||| |||    
T  38500007 taactttattatatcatttccaacaaaaataacttctgtaatcatatacataagcgcttatcatgataagcgcttgtgctataaactgcaaataagctgt 38500106  T
Q  112 ttatccaaacaggccc 127  Q
    ||||| ||||||||||    
T  38500107 ttatctaaacaggccc 38500122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 129
Target Start/End: Original strand, 27863846 - 27863903
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctt 129  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||    
T  27863846 tcatgataagcacttgtgctataagctacaaataagttgtttatccaaacaggccctt 27863903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 23989581 - 23989685
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||| |||||||||||| ||||| || ||||||||||||  ||| ||||||||||  | ||| | |||||||||||||||||||||  |||||    
T  23989581 ttttatcttttactataaaaatagtttatgcaaacttatacataagaacttatcatgataagcgcgtgtactataagctgcaaataagttgttactccaa 23989680  T
Q  120 acagg 124  Q
    |||||    
T  23989681 acagg 23989685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 11 - 103
Target Start/End: Original strand, 45806565 - 45806657
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa 103  Q
    ||||| || |||| || ||||||||||| |||||||||| |||||||||||||||||||| | ||||||||  ||| ||| ||||||||||||    
T  45806565 ttaacgttattttctcttttgctataaacatagcttatgcaagcttatacataagtgcttattatgataagtgcttttgctataagctgcaaa 45806657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 43 - 128
Target Start/End: Original strand, 3308372 - 3308457
Alignment:
Q  43 gcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    |||||||||| ||||||||||||  ||| |||||| ||| |||||||| ||||||| |||||||| |||||||| |||||| ||||    
T  3308372 gcttatgtaaccttatacataagcacttatcatgaaaagtacttgtgctataagctccaaataagctgtttatctaaacagaccct 3308457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 33266572 - 33266633
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    |||||||| ||||||| ||||||||| ||||||||| ||| |||||||||||||||||||||    
T  33266572 ttaactttattttatcctttgctatataaatagcttttgtgagcttatacataagtgcttgt 33266633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 18865149 - 18865249
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||| ||||||||   |||| ||||||||| |||||| ||||   ||| ||||||||||   |||||| ||||||||||||||||||||||||||||||    
T  18865149 ttatcttttgctatcttaataacttatgtaaacttataaataaacacttatcatgataagcgtttgtgctataagctgcaaataagttgtttatccaaac 18865248  T
Q  122 a 122  Q
    |    
T  18865249 a 18865249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 33673029 - 33672957
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||| |||| |||| ||||  |||||||| ||||||||||||||| | |||||||||||||||    
T  33673029 agcttatacataagcgcttatcataataaatacttgtgctataagctgcaaataaatagtttatccaaacagg 33672957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 40252188 - 40252301
Alignment:
Q  4 aaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa 103  Q
    |||||| |||||||||||||||||||||| |||||| |||||||||||||  |            || |||| |||||||| ||||| |||||||||| |    
T  40252188 aaacgatttaactttgttttatcatttgcaataaaactagcttatgtaagtgt-----------tttatcataataagaacatgtgctataagctgcata 40252276  T
Q  104 taagttgtttatccaaacaggccct 128  Q
    |||| ||||||||||||||||||||    
T  40252277 taaggtgtttatccaaacaggccct 40252301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 46280374 - 46280460
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||| |||||||||||||| ||| ||||||| |||||||||   ||||||| |||||||  ||||||  ||||||||||||||||    
T  46280374 aaatagattatgtaagcttatgcatgagtgcttatcatgataaacgcttgtgctataagctataaataaactgtttatccaaacagg 46280460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 119892 - 119775
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa--gaacttgtgcaataagctgcaaataagt 108  Q
    |||||||| ||||||| ||| || || |||||||||||||||| |||| ||| |||| ||||||||||||  |    ||||| |||||||||| |||||     
T  119892 ttaactttattttatcttttcctgtagaaatagcttatgtaaggttatgcat-agtgtttgtcatgataagtgtgtgtgtgctataagctgcagataagc 119794  T
Q  109 tgtttatccaaacaggccc 127  Q
    | |||||||||||||||||    
T  119793 tttttatccaaacaggccc 119775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 123
Target Start/End: Original strand, 11619347 - 11619386
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  11619347 cttgtgcaataatctgcaaataagttgtttatccaaacag 11619386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 127
Target Start/End: Original strand, 40377997 - 40378032
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||||||||||||||||||||||||||||    
T  40377997 ataagctgcaaataagttgtttatccaaacaggccc 40378032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 45004748 - 45004633
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||| |||||||||||||||| ||||| |||| ||||   |   | || |||| ||||   ||||||| |||| |||||||||||||     
T  45004748 ttaactttattttatcttttgctataaaaatagtttatgcaagcatataggcacacgtttatcataataattgcttgtgctataaactgcaaataagtta 45004649  T
Q  111 tttatccaaacaggcc 126  Q
    ||||||||||||||||    
T  45004648 tttatccaaacaggcc 45004633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 47795905 - 47795838
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||||||| || ||||||||||  ||| ||| |||||||||||||||| |||||||| |||||    
T  47795905 ttatacataagtggttatcatgataagcgcttatgctataagctgcaaataagctgtttatctaaaca 47795838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 120
Target Start/End: Complemental strand, 28900870 - 28900760
Alignment:
Q  11 ttaactttgttttatcatttgcta-taaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    |||||||| |||||||||||| || ||||||||   |||||  | ||| ||||||| |||| |||| ||||   ||||||  ||||||||||||||||||    
T  28900870 ttaactttattttatcatttgataataaaaataatatatgtccgattagacataagcgcttatcataataaatgcttgtgttataagctgcaaataagtt 28900771  T
Q  110 gtttatccaaa 120  Q
    |||||||||||    
T  28900770 gtttatccaaa 28900760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 39393695 - 39393772
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||| ||||| |||| ||||||| | | ||||||| |||||||||||||||| |||| ||||||||||| |||||    
T  39393695 agcttata-ataagcgcttatcatgatcaaagcttgtgctataagctgcaaataagctgttcatccaaacagggcctta 39393772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 48140189 - 48140139
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgctt 70  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||||| ||||    
T  48140189 ttttatcttttgttataaaaatagcttatgcaagcttatacataagcgctt 48140139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 61
Target Start/End: Original strand, 31247666 - 31247707
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttataca 61  Q
    ||||||| |||||||||||||||||||||| |||||||||||    
T  31247666 ttttatcttttgctataaaaatagcttatgcaagcttataca 31247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 64
Target Start/End: Complemental strand, 420333 - 420289
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataa 64  Q
    ||||||| ||||||||||| |||||||||| ||||||||||||||    
T  420333 ttttatcttttgctataaacatagcttatgcaagcttatacataa 420289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 28210356 - 28210324
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||||||||||||||||||||||    
T  28210356 ataagctgcaaataagttgtttatccaaacagg 28210324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 30571019 - 30571128
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||| | || |||||| || ||||||||||||||||||||||| |  ||| ||||| ||        ||| |||||||||||||||| ||    
T  30571019 ttaactttattttacctttcgctatataagtagcttatgtaagcttatacatatgcacttatcatgcta--------tgctataagctgcaaataagctg 30571110  T
Q  111 tttatccaaacaggccct 128  Q
    |||||||||||| |||||    
T  30571111 tttatccaaacacgccct 30571128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 45806414 - 45806462
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttata 59  Q
    ||||| || ||||||| |||||||||||||||||||||| |||||||||    
T  45806414 ttaacgttattttatcttttgctataaaaatagcttatgcaagcttata 45806462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 72 - 124
Target Start/End: Complemental strand, 46139873 - 46139821
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||||  ||||||  ||||||||||||||||||||||| |||||||||    
T  46139873 tcatgataagtgcttgtgttataagctgcaaataagttgtttaaccaaacagg 46139821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 7612410 - 7612331
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacaggccctta 130  Q
    |||||||||||| | |||| ||||||||||  ||| ||| |||||||||||| ||||||||||||  ||||||| |||||    
T  7612410 agcttatacatatgagcttatcatgataagtgcttatgctataagctgcaaattaagttgtttattgaaacaggacctta 7612331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 65 - 116
Target Start/End: Complemental strand, 17248485 - 17248434
Alignment:
Q  65 gtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||| ||||||||||||||||||| ||||| || ||||||| ||||||||    
T  17248485 gtgcttatcatgataagaacttgtgctataagttgtaaataaggtgtttatc 17248434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 37 - 72
Target Start/End: Original strand, 17983715 - 17983750
Alignment:
Q  37 aaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    ||||||||||||||||||||||||||||| ||||||    
T  17983715 aaaatagcttatgtaagcttatacataagcgcttgt 17983750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 20526428 - 20526369
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgctt 70  Q
    |||||||| ||||||| ||||||||| || |||| || ||||| ||||||||||||||||    
T  20526428 ttaactttattttatcttttgctatataagtagcataggtaagtttatacataagtgctt 20526369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 21619358 - 21619295
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttat 115  Q
    |||||| | |||||||||| ||||||||||  ||||||| ||||||||||||| || |||||||    
T  21619358 agcttagagataagtgcttatcatgataagtgcttgtgctataagctgcaaattagatgtttat 21619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 34464301 - 34464415
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||||||  |||||| |||  |||||||||| ||| ||||||| |||  |||||||||| ||||||||||   || ||| ||| |||||||| | ||||    
T  34464301 ttaactttaatttatctttttttataaaaataacttgtgtaagcatatg-ataagtgcttatcatgataagggtttatgctataggctgcaaacatgttg 34464399  T
Q  111 tttatccaaacaggcc 126  Q
    |||||||||| |||||    
T  34464400 tttatccaaaaaggcc 34464415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 38138588 - 38138679
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    |||||||||||||||||  || |||||||||||   ||| |||||| |||   |||||| |||||  ||||||||| |||||||||||||||    
T  38138588 ctataaaaatagcttatccaaccttatacataaactcttatcatgacaagtgattgtgctataagacgcaaataagctgtttatccaaacag 38138679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 40196350 - 40196243
Alignment:
Q  17 ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||| ||||| ||||||| |||||||  ||||| |||||||||  |||| |||| ||||||||||  | |||||  ||| || |||||||||||||||||    
T  40196350 ttgtattatcttttgcta-aaaaatacattatgcaagcttata--taagcgcttatcatgataagcgcatgtgctgtaaactacaaataagttgtttatc 40196254  T
Q  117 caaacaggccc 127  Q
    |||||| ||||    
T  40196253 caaacaagccc 40196243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 13 - 107
Target Start/End: Complemental strand, 20428447 - 20428353
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataag 107  Q
    |||||| ||||||||||| | ||||||  | ||||||||| |||||||||||| |||| |||||| |||   |||||| ||||||| ||| ||||    
T  20428447 aactttattttatcatttccaataaaaccaccttatgtaaccttatacataagcgcttatcatgagaagtgtttgtgctataagctccaactaag 20428353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 20881755 - 20881825
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||| ||||||||| |||| ||||||||||  ||||||| |||| || ||||||||||||| ||| |||||    
T  20881755 agctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataagttgttcatctaaaca 20881825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Original strand, 22296366 - 22296404
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  22296366 cttgtgctataagctgcaaataagttgtttatctaaaca 22296404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Original strand, 28613622 - 28613659
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttat 48  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  28613622 ttaactttgttttatcttttgttataaaaatagcttat 28613659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 39279745 - 39279704
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaa 52  Q
    |||||||||||||||| ||||||||| ||| |||||||||||    
T  39279745 ttaactttgttttatcttttgctatagaaacagcttatgtaa 39279704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 45593444 - 45593411
Alignment:
Q  97 ctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||||||||||||||||||||||| |||||    
T  45593444 ctgcaaataagttgtttatccaaacagggcctta 45593411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Original strand, 7512313 - 7512345
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||| ||||||||||||||||||||||||    
T  7512313 ataagctgtaaataagttgtttatccaaacagg 7512345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Original strand, 31247633 - 31247665
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatac 60  Q
    |||||||||||||||||||||| ||||||||||    
T  31247633 tttgctataaaaatagcttatgcaagcttatac 31247665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 39967849 - 39967805
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    ||||||||||||||||||| || | || |||||||||||||||||    
T  39967849 tcatgataagaacttgtgctatgaacttcaaataagttgtttatc 39967805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Complemental strand, 46407110 - 46407074
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  46407110 ataagctacaaataagttgtttatcaaaacaggccct 46407074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 122
Target Start/End: Complemental strand, 47177585 - 47177517
Alignment:
Q  54 cttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||| ||| |||| |||| |||||  ||| ||| |||| | ||||||||||||||||||||||||    
T  47177585 cttatacagaagggcttatcatcataagtgcttatgctataatcagcaaataagttgtttatccaaaca 47177517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 5e-31; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 3735579 - 3735695
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||| ||| ||||||||| ||||||||||||||||||||| |||||| |||| |||||||||   ||||||| |||||||||||||| ||||    
T  3735579 ttaactttatttcatcttttgctatagaaatagcttatgtaagcttatccataagcgcttatcatgataatctcttgtgctataagctgcaaataggttg 3735678  T
Q  111 tttatccaaacaggccc 127  Q
    |||||||||||||||||    
T  3735679 tttatccaaacaggccc 3735695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 13 - 128
Target Start/End: Complemental strand, 32372604 - 32372489
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    |||||| ||||||||  |||||||| ||||| |||||||||  |||||||||| |||| ||||||||||  ||||||| |||||||||||||||||||||    
T  32372604 aactttattttatcaggtgctataataatagtttatgtaagtgtatacataagggcttatcatgataagtgcttgtgctataagctgcaaataagttgtt 32372505  T
Q  113 tatccaaacaggccct 128  Q
    |||||||||| |||||    
T  32372504 tatccaaacatgccct 32372489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 122
Target Start/End: Complemental strand, 12554445 - 12554334
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| ||||||||||| |||||||||||||||||| |||||||| | ||| | ||| |||| |||||   ||||||  ||||||||||||||||||    
T  12554445 ttaactttattttatcatttactataaaaatagcttatggaagcttatgcgtaaatacttatcataataagcgtttgtgctttaagctgcaaataagttg 12554346  T
Q  111 tttatccaaaca 122  Q
    ||||||||||||    
T  12554345 tttatccaaaca 12554334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 38 - 121
Target Start/End: Original strand, 7319126 - 7319209
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||  ||||||| |||||||| ||||||| ||||||| |||||    
T  7319126 aaatagcttatgtaagcttatgcataagtgcttatcatgataagcgcttgtgctataagctgtaaataagctgtttattcaaac 7319209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 7706085 - 7706184
Alignment:
Q  32 ctataaaaatagcttatgtaagcttata----cataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||||||||||||||||||||||     ||||||| ||  |||||||||| |||||||| |||| ||||||||||||||||||| |||||||||||    
T  7706085 ctataaaaatagcttatgtaagcttatttatgcataagtacta-tcatgataagcacttgtgctataacctgcaaataagttgtttatacaaacaggccc 7706183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 122
Target Start/End: Original strand, 24030490 - 24030601
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||| |||||||  ||||||||  |||||||||||| ||||||||||   |  ||| ||||||||||  ||||||| |||||||||||||||| ||    
T  24030490 ttaactttattttatcggttgctatagcaatagcttatgtgagcttatacacgcgcacttatcatgataagtgcttgtgctataagctgcaaataagctg 24030589  T
Q  111 tttatccaaaca 122  Q
    ||||||||||||    
T  24030590 tttatccaaaca 24030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 12857793 - 12857910
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||  ||||||||||| ||||||||||| || || |||| |||| |||| |||||| | |||||| |   |||||||||||| | |||||||||||    
T  12857793 ttaacttcattttatcattttctataaaaataactaatataaggttatgcataggtgcttatgatgatacgtgtttgtgcaataagttacaaataagttg 12857892  T
Q  111 tttatccaaacaggccct 128  Q
    ||||||||||||| ||||    
T  12857893 tttatccaaacagaccct 12857910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 25461853 - 25461962
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||| | |||||||||||||||||||| ||||||||| ||||   ||| ||||||||||  ||||||  ||||||| |||||||  || |||||||||    
T  25461853 tttatcttctgctataaaaatagcttatgcaagcttatatataaccacttatcatgataagcgcttgtgttataagctacaaataacctgcttatccaaa 25461952  T
Q  121 caggccctta 130  Q
    ||||||||||    
T  25461953 caggccctta 25461962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 16458075 - 16458188
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgc----aataagctgcaaataagttgtttat 115  Q
    ||||||| |||||||||||||||||||||| ||||||||| |||||  ||| ||| ||||||| ||||| |    ||||||||||||||||| | |||||    
T  16458075 ttttatcttttgctataaaaatagcttatgcaagcttatatataagcacttatcaggataagagcttgttccataaataagctgcaaataagctttttat 16458174  T
Q  116 ccaaacaggccctt 129  Q
    ||||  ||||||||    
T  16458175 ccaagaaggccctt 16458188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 55 - 119
Target Start/End: Original strand, 19460508 - 19460572
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    |||||||||||||||| |||||||||| | |||||| |||||||||||||||| |||||||||||    
T  19460508 ttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtttatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 40426743 - 40426632
Alignment:
Q  15 ctttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttg----tcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||| ||||||| |||||||||||| || || |||||||||| || |||||||| ||    ||||||||||  ||||||| ||||||||||||| |||||    
T  40426743 ctttattttatcttttgctataaaa-taactcatgtaagcttgtatataagtgcatgcttatcatgataagtgcttgtgctataagctgcaaatgagttg 40426645  T
Q  111 tttatccaaacag 123  Q
    |||||||||||||    
T  40426644 tttatccaaacag 40426632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 9202867 - 9202945
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||| |||||  ||| |||||||||  |||||||| |||||||||||||||| |||||||||||||||| |||||    
T  9202867 agcttatatataagcacttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaaacagggcctta 9202945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 122
Target Start/End: Complemental strand, 10639926 - 10639825
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||||||||| ||||||||||| ||  ||||||||||||||||| || ||||||  |||| |||  |||| |||||||||| |||||||||||    
T  10639926 ttttatcttttgctatagaaatagcttatatagacttatacataagtgcttatcgtgataaccacttttgc-ttaagttgcaaataagctgtttatccaa 10639828  T
Q  120 aca 122  Q
    |||    
T  10639827 aca 10639825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 126
Target Start/End: Original strand, 16938001 - 16938070
Alignment:
Q  57 atacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 126  Q
    |||||||||||||| |||||||||  |||||||  ||||||| |||||||||||||| ||||||||||||    
T  16938001 atacataagtgcttatcatgataaacacttgtgttataagcttcaaataagttgtttgtccaaacaggcc 16938070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 32941443 - 32941339
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| |||||| ||||| |||| |||| |||||||||| |||| |||| ||||| ||||  ||| ||| ||||||||| |||||| |||||||||||    
T  32941443 ttttatcttttgctctaaaactagcctatgcaagcttatacgtaagcgcttatcatggtaagtgctt-tgctataagctgctaataagctgtttatccaa 32941345  T
Q  120 acaggc 125  Q
    ||||||    
T  32941344 acaggc 32941339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 35446037 - 35445992
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagctt 56  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  35446037 ttaactttattttatcatttgctataaaaatagcttatgtaagctt 35445992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 38 - 131
Target Start/End: Original strand, 40439070 - 40439162
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    ||||||||||||||||||||||||| ||||| | ||| ||||||  ||||||  ||||| |||||||||| |||||||||||||| ||| ||||    
T  40439070 aaatagcttatgtaagcttatacatgagtgcctatcaagataagcgcttgtg-tataaggtgcaaataagctgtttatccaaacaagccgttaa 40439162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 124
Target Start/End: Complemental strand, 31051871 - 31051767
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| ||||| ||| ||| |||||||||||||||||| ||||    || |||||||||| |||||||| ||||||||| ||||| | |||||| |||    
T  31051871 ttttatcttttgccatagaaacagcttatgtaagcttatagataatcatttatcatgataagcacttgtgctataagctgcgaataaatggtttattcaa 31051772  T
Q  120 acagg 124  Q
    |||||    
T  31051771 acagg 31051767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 25461064 - 25460957
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||| ||||||| |||||||||||| | ||||||||| |||||  ||| ||||||||||  ||| ||| |||||||  | ||||| ||||||||||||    
T  25461064 tttatcttttgctagaaaaatagcttacgcaagcttatatataagctcttatcatgataagtgcttatgctataagctaaatataagctgtttatccaaa 25460965  T
Q  121 caggccct 128  Q
    || |||||    
T  25460964 catgccct 25460957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Complemental strand, 28776926 - 28776855
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    ||||||||||||||  ||| ||||||||||  |||  || ||||||||||||||||||||||||||||||||    
T  28776926 agcttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaaacag 28776855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 111
Target Start/End: Complemental strand, 39105415 - 39105356
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgt 111  Q
    |||||||||||||| |||| |||||||||| |||| ||| ||||||||||||||||||||    
T  39105415 agcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataagttgt 39105356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 119
Target Start/End: Original strand, 25461744 - 25461842
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    |||||| |||||||||||||||||||||| ||||||||| ||||   ||| |||||| |||| | ||||  ||||||| |||||||| || ||||||||    
T  25461744 tttatcttttgctataaaaatagcttatgcaagcttatatataaccacttatcatgagaagagcctgtgttataagctacaaataagctgcttatccaa 25461842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 42500313 - 42500374
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    |||||||| ||||||| |||| ||||||||||||||||| |||||||||||| || ||||||    
T  42500313 ttaactttattttatcttttgatataaaaatagcttatgcaagcttatacattagcgcttgt 42500374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 6096494 - 6096427
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||||||||||||| ||||||||||| |||   | || ||||||||||||||||||||| ||||||    
T  6096494 agcttatacataagtgcttatcatgataagagctt---ctatgagctgcaaataagttgtttatacaaaca 6096427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 13697847 - 13697959
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| || ||||||| |||||||||||||||  ||||| ||| |||| || ||   ||| |||||||||   ||| ||  |||||||||||||||||||    
T  13697847 ttaacattattttatcttttgctataaaaataatttatgcaagtttatgcaaaatcacttatcatgataaatgcttatgttataagctgcaaataagttg 13697946  T
Q  111 tttatccaaacag 123  Q
    |||||||||||||    
T  13697947 tttatccaaacag 13697959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 38 - 122
Target Start/End: Original strand, 26005353 - 26005437
Alignment:
Q  38 aaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||| |||||||||||||||   || |||| |||||   |||||| ||||||| | |||||||||||||||||||||    
T  26005353 aaatagcttatgcaagcttatacataagcaattatcataataagtgtttgtgctataagcttctaataagttgtttatccaaaca 26005437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 34669836 - 34669916
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    ||||| |||||  ||| |||||| || | |||||||||| ||||||||||||||||||| |||||||  ||||||||||||    
T  34669836 ctatagaaataatttaggtaagcataaaaataagtgcttatcatgataagaacttgtgctataagcttgaaataagttgtt 34669916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 32703574 - 32703639
Alignment:
Q  59 acataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||| |||| |||||||||   ||||||| |||||||||||||||||||||| || |||||||    
T  32703574 acataagcgcttatcatgataaatgcttgtgctataagctgcaaataagttgtttttctaaacagg 32703639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 20 - 67
Target Start/End: Original strand, 3932782 - 3932830
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaa-gcttatacataagtg 67  Q
    ||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  3932782 ttttatcttttgctataaaaatagcttatgtaattcttatacataagtg 3932830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 34736645 - 34736713
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    ||||||| |||||||| || ||||| ||||   |||||| |||||||||| ||||||||||||||||||    
T  34736645 agcttatgcataagtgattatcatggtaagtgtttgtgctataagctgcagataagttgtttatccaaa 34736713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 48 - 100
Target Start/End: Complemental strand, 42646600 - 42646548
Alignment:
Q  48 tgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgc 100  Q
    |||||||||||| ||||| |||| |||||||||| |||||||| |||||||||    
T  42646600 tgtaagcttatatataagcgcttatcatgataagcacttgtgctataagctgc 42646548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 10771997 - 10772068
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaaca 122  Q
    |||||||||||| ||| || |||||||||| |||| ||| |||||||||||| |||||||| ||| ||||||    
T  10771997 agcttatacatatgtgtttatcatgataagcacttatgctataagctgcaaattaagttgtatattcaaaca 10772068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 123
Target Start/End: Original strand, 12433539 - 12433570
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacag 123  Q
    ||||||||||||||||||||||||||||||||    
T  12433539 ataagctgcaaataagttgtttatccaaacag 12433570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 122
Target Start/End: Complemental strand, 3520340 - 3520302
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||| |||||||| ||||||||||||||||||||||    
T  3520340 cttgtgctataagctgaaaataagttgtttatccaaaca 3520302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 32009951 - 32009857
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggcc 126  Q
    |||||||||||||||| |||||||||| |||||  || | ||||||||| | ||  | | |||||||||||||||| | |||||| ||| |||||    
T  32009951 ctataaaaatagcttacgtaagcttatgcataatcgcatatcatgataacagctcttactataagctgcaaataagctatttatcgaaataggcc 32009857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 42573898 - 42573972
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacaggc 125  Q
    |||||||||||||| |||| ||||||||||  ||   || |||||||||||| |||| |||||||||||||||||    
T  42573898 agcttatacataagcgcttatcatgataagcgctcaggctataagctgcaaattaagctgtttatccaaacaggc 42573972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 113
Target Start/End: Complemental strand, 7984929 - 7984868
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 113  Q
    |||||| ||||||| |||| ||||||||||  | ||| | ||||||||||||||||||||||    
T  7984929 agcttaaacataagcgcttatcatgataagcgcatgtactataagctgcaaataagttgttt 7984868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 28 - 65
Target Start/End: Complemental strand, 15015816 - 15015779
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||| |||||||||||||| |||||||||||||||    
T  15015816 tttgctacaaaaatagcttatgcaagcttatacataag 15015779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 29925814 - 29925769
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||| |||||||||||||||||||||| |||| ||||| ||||    
T  29925814 ttttatcttttgctataaaaatagcttatgcaagcatatacttaag 29925769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 34590355 - 34590420
Alignment:
Q  60 cataagtgcttgtcatgataagaacttgtgcaataagctgc-aaataagttgtttatccaaacagg 124  Q
    ||||||||||| |||||||||  |||| | | ||||||||| |||||||| |||||||||||||||    
T  34590355 cataagtgcttatcatgataaatacttatcctataagctgcaaaataagtcgtttatccaaacagg 34590420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 36227768 - 36227723
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||| |||||||||||||||| ||| | |||||||||||||||    
T  36227768 ttttatcttttgctataaaaatagattaagcaagcttatacataag 36227723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 465905 - 465841
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||||| |||||||||| |||||| | || ||| ||  |||| ||||||||||||||||||||    
T  465905 agcttatatataagtgcttatcatgaaatgagcttatgttataaactgcaaataagttgtttatc 465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 1465138 - 1465206
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||||||||||| |||| || ||||||| |||| ||| |||| |||| |||||  ||||||||||||    
T  1465138 agcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatccaaa 1465206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 116
Target Start/End: Original strand, 10502557 - 10502601
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    |||||||||||||| |||  |||||||||||||||||| ||||||    
T  10502557 tcatgataagaactcgtgttataagctgcaaataagttatttatc 10502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 12857435 - 12857494
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa 80  Q
    ||||||||||| |||||||||||| | || ||||||||| ||||||||||| | |||||||    
T  12857435 ttttatcattt-ctataaaaatagttaatataagcttatgcataagtgcttatgatgataa 12857494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 113
Target Start/End: Complemental strand, 35299689 - 35299617
Alignment:
Q  41 tagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 113  Q
    |||||||||||||||| | |||||||||   ||||||||||  |||||||  || |||||||||||| |||||    
T  35299689 tagcttatgtaagcttttgcataagtgccgatcatgataagtgcttgtgctctatgctgcaaataagctgttt 35299617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 37112398 - 37112438
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||| ||||||||||| ||||||| ||||||||    
T  37112398 cttgtgcaataatctgcaaataagatgtttatacaaacagg 37112438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 42100230 - 42100198
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||||||| ||||||||||||||    
T  42100230 ataagctgcaaataagttatttatccaaacagg 42100198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 42228070 - 42228030
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||| ||||||| |||||| ||||||||||||||||||    
T  42228070 cttgtgctataagcttcaaatatgttgtttatccaaacagg 42228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 9e-30; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 24626277 - 24626159
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||   |  |||||||||| | |||||| |||||||| ||||||||||    
T  24626277 ttaactttgttttatcctttcctatagaaatagcttatgtaagcttatacataagcaatcatcatgataagcatttgtgctataagctgtaaataagttg 24626178  T
Q  111 tttatccaaacaggccctt 129  Q
    |||||||||||||| ||||    
T  24626177 tttatccaaacaggtcctt 24626159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 34430686 - 34430578
Alignment:
Q  23 tatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||| ||||| | ||| |||||||||| ||||||||||||||| || | |||||||||| |||||||| |||||||||||||||| |||||||| |||||    
T  34430686 tatcctttgcaaaaaatatagcttatggaagcttatacataagcgcctatcatgataagcacttgtgctataagctgcaaataagatgtttatcgaaaca 34430587  T
Q  123 ggcccttaa 131  Q
     ||||||||    
T  34430586 tgcccttaa 34430578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 6538488 - 6538383
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaac 121  Q
    ||||| ||||||| |||| || |||||| ||||||||||||||| |||| |||| |||||  ||||||| |||||||||||||||| | |||||||||||    
T  6538488 ttatcttttgctaaaaaactaacttatgcaagcttatacataagcgcttatcattataagtgcttgtgctataagctgcaaataagctatttatccaaac 6538389  T
Q  122 aggccc 127  Q
    ||||||    
T  6538388 aggccc 6538383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 128
Target Start/End: Complemental strand, 30926510 - 30926405
Alignment:
Q  21 tttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||||| ||| ||||| ||||||||||||||||||||||| ||| ||||| ||||||||||  ||||||| ||||||||| |  |||||||||||| |||    
T  30926510 tttatcttttactatagaaatagcttatgtaagcttatacttaattgcttatcatgataagcccttgtgctataagctgcca--aagttgtttatctaaa 30926413  T
Q  121 caggccct 128  Q
    ||||||||    
T  30926412 caggccct 30926405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 18076178 - 18076083
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataa 106  Q
    ||||| || |||| || ||||||||||||||| |||||| |||||||||||||||||||| | ||||||||  ||||||| |||||||||||||||    
T  18076178 ttaaccttattttctcttttgctataaaaataacttatgcaagcttatacataagtgcttattatgataagcgcttgtgctataagctgcaaataa 18076083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 130
Target Start/End: Complemental strand, 8147682 - 8147568
Alignment:
Q  13 aactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtt 112  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||| | |||| |||| ||||||||||  ||   ||  ||||||||||||| ||||||    
T  8147682 aactttattttatcttttgctataaaaatagcttatgt-agcttatgcttaagcgcttatcatgataagcgctaaggc--taagctgcaaatatgttgtt 8147586  T
Q  113 tatccaaacaggccctta 130  Q
    ||||||||||||||||||    
T  8147585 tatccaaacaggccctta 8147568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 26550304 - 26550404
Alignment:
Q  24 atcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg-caaataagttgtttatccaaaca 122  Q
    |||||||| |||| | ||||||||||||||||||||||||||||||| |||| | |||   |||||| ||||||||  ||||| ||||||||||||||||    
T  26550304 atcatttgttatagagatagcttatgtaagcttatacataagtgcttatcattagaagttattgtgctataagctgtaaaatatgttgtttatccaaaca 26550403  T
Q  123 g 123  Q
    |    
T  26550404 g 26550404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 35070727 - 35070833
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttata-cataagtgcttgtcatgataagaacttgtgcaataagctgcaaat-aagttgtttatcc 117  Q
    ||||||| ||| |||||||||||||||||||||||||||| ||| ||||||| |||||| |||  ||||||| ||||| ||||||| |||| | |||| |    
T  35070727 ttttatctttttctataaaaatagcttatgtaagcttatagcattagtgcttatcatgacaagtgcttgtgctataaggtgcaaatgaagtagattatgc 35070826  T
Q  118 aaacagg 124  Q
    |||||||    
T  35070827 aaacagg 35070833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 264322 - 264244
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||| |||||  ||| |||||||||| |||||||| ||||||||||||| || |||| ||||||||||| |||||    
T  264322 agcttatatataagcacttatcatgataagcacttgtgctataagctgcaaattagctgttaatccaaacagggcctta 264244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 52 - 124
Target Start/End: Complemental strand, 35069503 - 35069431
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||| ||||||  ||| |||||||||   ||||||| ||||||||||||||||||||||||| |||||||    
T  35069503 agcttatgcataagcacttatcatgataaacgcttgtgctataagctgcaaataagttgtttatcaaaacagg 35069431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 10645465 - 10645516
Alignment:
Q  69 ttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaa 120  Q
    |||| |||||||| | |||||| |||||||||||||||||||||||||||||    
T  10645465 ttgtaatgataagcatttgtgctataagctgcaaataagttgtttatccaaa 10645516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 30536657 - 30536700
Alignment:
Q  22 ttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||| |||||||||||||||||||||| |||||||||||||||    
T  30536657 ttatcttttgctataaaaatagcttatgcaagcttatacataag 30536700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 119
Target Start/End: Complemental strand, 9632847 - 9632785
Alignment:
Q  57 atacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||| ||||| || | |||||||| | |||||| ||||||||||||||||||||||||||||    
T  9632847 atacacaagtgtttattatgataagcatttgtgctataagctgcaaataagttgtttatccaa 9632785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 30536460 - 30536406
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||| || |||||||||||||||||| ||||||||||| || ||||||||||||    
T  30536460 ttaacattattttatcatttgctataataatagcttatgcaaacttatacataag 30536406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 14929653 - 14929604
Alignment:
Q  74 atgataagaacttgtgcaataagctgcaaataagttgtttatccaaacag 123  Q
    |||||||| |||||||| ||||||||||||| |||||||| |||||||||    
T  14929653 atgataagcacttgtgctataagctgcaaatgagttgtttgtccaaacag 14929604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 33943251 - 33943147
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||||||  ||||||||||||| | |||||||||||| |  |||| ||| |||| |||| |||||||||| | ||| |  ||||||| |||||||||||    
T  33943251 ttaactttaatttatcatttgctcttaaaatagcttatatt-gcttttacttaagcgcttatcatgataagtatttgcggtataagctacaaataagttg 33943153  T
Q  111 tttatc 116  Q
    ||||||    
T  33943152 tttatc 33943147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 32 - 128
Target Start/End: Original strand, 19411592 - 19411688
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    |||||||| || ||||||||| |||||||||||| |||| | |||| |||   |||||| ||||||| |||||||| |  |||||||||||| ||||    
T  19411592 ctataaaactaccttatgtaaccttatacataagagcttattatgagaagtttttgtgctataagctccaaataagctacttatccaaacagaccct 19411688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 67
Target Start/End: Complemental strand, 9763437 - 9763390
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtg 67  Q
    ||||||| |||| |||||||||| ||||||||| ||||||||||||||    
T  9763437 ttttatcttttgttataaaaatatcttatgtaaacttatacataagtg 9763390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 65
Target Start/End: Complemental strand, 14164085 - 14164050
Alignment:
Q  30 tgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||||||||| ||||||||||||||||||||||    
T  14164085 tgctataaaaatatcttatgtaagcttatacataag 14164050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 29754176 - 29754279
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| |||| ||  ||||||||||||| ||||| ||||||||| |||| ||||||||||  ||||||| || | ||| ||  |||| |||| |||||    
T  29754176 ttttatcttttgttactaaaatagcttatgcaagctaatacataagcgcttatcatgataagcgcttgtgctatcacctgaaacaaagtggtttttccaa 29754275  T
Q  120 acag 123  Q
    ||||    
T  29754276 acag 29754279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 107
Target Start/End: Original strand, 32014162 - 32014233
Alignment:
Q  36 aaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataag 107  Q
    |||||||||||||| ||||||| ||| || ||||| |  ||||||| |||||||| | ||||||||||||||    
T  32014162 aaaaatagcttatgcaagcttacacacaaatgcttatattgataagcacttgtgctagaagctgcaaataag 32014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 18690476 - 18690422
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    |||| ||| ||||||| |||||||||||| || ||||||||| ||||||||||||    
T  18690476 ttaaatttattttatcctttgctataaaagtaccttatgtaaccttatacataag 18690422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 848008 - 847931
Alignment:
Q  53 gcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||||||||||| |||| | |||||||   |||||   |||||||||||| |||||||||||||||| ||| |||||    
T  848008 gcttatacataagcgcttattatgataactgcttgtcttataagctgcaaaaaagttgtttatccaaagagggcctta 847931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Original strand, 6909982 - 6910031
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 81  Q
    ||||| |||||||||||||||| |||||||||||  ||| ||||||||||    
T  6909982 ctatagaaatagcttatgtaagtttatacataagcacttatcatgataag 6910031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 23063650 - 23063719
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||||  |||| |||||||||  | |||||| ||||| ||||||||||||| | |||||||||||    
T  23063650 ttatacataaacgcttatcatgataatcatttgtgctataagatgcaaataagttgataatccaaacagg 23063719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 65
Target Start/End: Complemental strand, 31623533 - 31623488
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||| ||| |||||||||||||| |||||||||||| ||||||    
T  31623533 ttttatctttttctataaaaatagctaatgtaagcttatgcataag 31623488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 72 - 124
Target Start/End: Original strand, 658584 - 658636
Alignment:
Q  72 tcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||| |||||||| ||||| || |||||| | |||||||||||||||    
T  658584 tcatgataagtacttgtgctataagttgaaaataaatagtttatccaaacagg 658636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 2e-27; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 17204119 - 17204001
Alignment:
Q  12 taactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgt 111  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||| | ||||||| | || || |||||||  ||||| | ||||||||||||||||||||    
T  17204119 taactttattttaacatttgctataaaaacagcttatgtaagctaacacataagcggttatcgtgataagtgcttgttctataagctgcaaataagttgt 17204020  T
Q  112 ttatccaaacaggccctta 130  Q
    |||||||||||| ||||||    
T  17204019 ttatccaaacagtccctta 17204001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 11 - 127
Target Start/End: Complemental strand, 43505938 - 43505824
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| || ||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||  |   |||||| ||||| |||||||||||||    
T  43505938 ttaacgttattttatcttttgctataaaaatagcttatgcaagcttatacataagtgcttatcatgat--gcgtttgtgctataagttgcaaataagttg 43505841  T
Q  111 tttatccaaacaggccc 127  Q
    |||||||||||| ||||    
T  43505840 tttatccaaacatgccc 43505824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 130
Target Start/End: Original strand, 50681177 - 50681296
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| || ||||||| | | ||||||||||||||| |||||||||||||||||  |||| ||||||||||  ||||||| |||||||  ||||||||||    
T  50681177 ttaacattattttatcttatcctataaaaatagcttttgtaagcttatacataaacgcttatcatgataagttcttgtgctataagctataaataagttg 50681276  T
Q  111 tttatccaaacaggccctta 130  Q
    |||||||||||| |||||||    
T  50681277 tttatccaaacaagccctta 50681296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 19494892 - 19494784
Alignment:
Q  15 ctttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttta 114  Q
    |||| ||||||||||||||||| || |||||||||||| |||||||||| |||||| |||||| ||| |||||||| ||||||| | |||||| ||||||    
T  19494892 ctttattttatcatttgctatagaactagcttatgtaaccttatacataggtgcttatcatgaaaagtacttgtgctataagctccgaataagatgttta 19494793  T
Q  115 tccaaacag 123  Q
    || ||||||    
T  19494792 tctaaacag 19494784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 31851436 - 31851343
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataa 106  Q
    |||||||| |||||||||||| |||||||||||||||||| ||||| ||||||| ||||| |||||||||| |||||||  |||||||||||||||    
T  31851436 ttaactttattttatcatttgttataaaaatagcttatgtgagcttctacataaatgcttatcatgataagcacttgtg--ataagctgcaaataa 31851343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 41336742 - 41336655
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctg 99  Q
    |||||||| ||||||| |||||||||||||||||||||| |||| ||||||||||||||| |||| |||||||||||||| ||||||||    
T  41336742 ttaactttattttatc-tttgctataaaaatagcttatgcaagcctatacataagtgcttatcataataagaacttgtgctataagctg 41336655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 11 - 123
Target Start/End: Original strand, 25904298 - 25904414
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa----gtgcttgtcatgataagaacttgtgcaataagctgcaaataa 106  Q
    |||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||     ||||| ||||||||||  ||||||| |||| |||||||| |    
T  25904298 ttaactttattttatcttttgctgtaaaaatagcttatgtaagcttatatataatcacatgcttatcatgataagtgcttgtgctataatctgcaaatga 25904397  T
Q  107 gttgtttatccaaacag 123  Q
    |||||||||||||||||    
T  25904398 gttgtttatccaaacag 25904414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 28 - 131
Target Start/End: Original strand, 45935325 - 45935421
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    ||||||||||| |||||||||| |||||||||||||||||       |||||||  |||| || ||||||||||||||||||||||||||||||||||||    
T  45935325 tttgctataaacatagcttatgcaagcttatacataagtg-------tgataagcgcttgagctataagctgcaaataagttgtttatccaaacaggccc 45935417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 35571951 - 35572022
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||||||||||||||||||  |||||||| |||||||||||||||| |||||||||| |||||    
T  35571951 agcttatacataagtgcttgtcatgataaccacttgtgctataagctgcaaataag-tgtttatccatacagg 35572022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 24169240 - 24169126
Alignment:
Q  14 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 113  Q
    ||||| ||||| ||||||  |||||||||||||||||||||| ||||||||| |||  ||||||||||  || |||  ||||||||||| |||| |||||    
T  24169240 acttttttttaccatttgtcataaaaatagcttatgtaagctcatacataagcgctaatcatgataagtgctggtgatataagctgcaagtaagctgttt 24169141  T
Q  114 atccaaacaggccct 128  Q
     | ||||||||||||    
T  24169140 ctgcaaacaggccct 24169126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 18815051 - 18814960
Alignment:
Q  33 tataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggc 125  Q
    |||||||| ||||||||||||||||| || |||||||| | |||||||| |||||||| |||||||||||||||    |||||||||||||||    
T  18815051 tataaaaacagcttatgtaagcttatgcaaaagtgcttat-atgataagcacttgtgccataagctgcaaataaaccatttatccaaacaggc 18814960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 29912928 - 29912814
Alignment:
Q  14 actttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgttt 113  Q
    ||||| ||||||  ||||||||| |||||||| |||||||  |||||| |||||||| | |||||||   ||| ||| |||||| |||||||| ||||||    
T  29912928 actttattttattttttgctatagaaatagctgatgtaagtgtatacaaaagtgcttattatgataactgcttatgctataagcagcaaataatttgttt 29912829  T
Q  114 atccaaacaggccct 128  Q
    | |||||||||||||    
T  29912828 agccaaacaggccct 29912814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 50662851 - 50662929
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||||||||  |||  ||||||||||  ||||||  ||||||||||||||||||||||||||||||| |||||||    
T  50662851 agcttatacataaacgctcatcatgataagctcttgtgatataagctgcaaataagttgtttatccaaacatgccctta 50662929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 33587048 - 33587103
Alignment:
Q  17 ttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    |||||||||| || ||||||||||||||||||| ||||||||||||||| ||||||    
T  33587048 ttgttttatctttcgctataaaaatagcttatgcaagcttatacataagcgcttgt 33587103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Complemental strand, 3155554 - 3155476
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    ||||||||||||  ||||| ||||||||||  ||||| | |||||||||| |||||||||||||||||| ||| |||||    
T  3155554 agcttatacatacatgcttatcatgataagcgcttgtactataagctgcagataagttgtttatccaaatagggcctta 3155476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 130
Target Start/End: Original strand, 22539166 - 22539244
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccctta 130  Q
    |||||||||||||  |||||||||||||||  ||| ||| |||| ||||||||||||| |||||||||| ||| |||||    
T  22539166 agcttatacataaacgcttgtcatgataagggcttatgctataacctgcaaataagttatttatccaaagagggcctta 22539244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 52 - 122
Target Start/End: Original strand, 44863081 - 44863151
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||| ||||||  ||| |||||| |||  ||||||| |||||||||||||||||||||||||||||||    
T  44863081 agcttatgcataagcacttatcatgacaagtgcttgtgctataagctgcaaataagttgtttatccaaaca 44863151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 128
Target Start/End: Original strand, 54069505 - 54069623
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgc-ttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||| || ||||||| |||| |||||||||||| |||| |||||||||||||||||| || |||   ||||   |||||| |||||||| |||||||||    
T  54069505 ttaacattattttatcttttgatataaaaatagcatatgcaagcttatacataagtgctttatcacagtaagtgtttgtgctataagctgaaaataagtt 54069604  T
Q  110 gtttatccaaacaggccct 128  Q
    | || |||||| |||||||    
T  54069605 gattctccaaagaggccct 54069623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 15177290 - 15177359
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataa 80  Q
    ||||| || ||||||| || ||||| ||||||||||||| ||||||||||||| |||||| |||||||||    
T  15177290 ttaacgttattttatctttagctattaaaatagcttatgcaagcttatacatacgtgcttatcatgataa 15177359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 81
Target Start/End: Complemental strand, 22030184 - 22030116
Alignment:
Q  12 taactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataag 81  Q
    ||||||| ||||||| ||| ||||| ||||||||||||| |||||||||||||| |||| ||||||||||    
T  22030184 taactttattttatccttt-ctatagaaatagcttatgtgagcttatacataagcgcttatcatgataag 22030116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 28 - 109
Target Start/End: Original strand, 1242380 - 1242457
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagtt 109  Q
    ||||||||||||||||||||||    |||||| |||||||||| | |||||||| |||| | | ||||||||||||||||||    
T  1242380 tttgctataaaaatagcttatg----cttataaataagtgcttattatgataagcacttatactataagctgcaaataagtt 1242457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 11 - 126
Target Start/End: Complemental strand, 44797868 - 44797759
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||| |||||||||| |||||||||||||||||||||| ||      | ||||   |||  ||||||||   ||||||| ||||| |||||||||||||    
T  44797868 ttaacgttgttttatcttttgctataaaaatagcttatgcaa------atataatctcttaccatgataatcgcttgtgctataagttgcaaataagttg 44797775  T
Q  111 tttatccaaacaggcc 126  Q
    ||||||||||||||||    
T  44797774 tttatccaaacaggcc 44797759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 130
Target Start/End: Original strand, 15173397 - 15173506
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaa 119  Q
    ||||||| || ||||| ||| ||||||||| ||||||||||||| | |||| ||||||||||   |||||| | |||||| ||||||| | ||||| |||    
T  15173397 ttttatctttagctattaaagtagcttatgcaagcttatacatatgcgcttatcatgataagcgtttgtgctacaagctgaaaataagctatttat-caa 15173495  T
Q  120 acaggccctta 130  Q
    |||| ||||||    
T  15173496 acagtccctta 15173506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 58
Target Start/End: Complemental strand, 20109553 - 20109515
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttat 58  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  20109553 ttttatcatttgctataaaaatagcctatgtaagcttat 20109515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 26520351 - 26520421
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacagg 124  Q
    |||||||||||||||| |||||||||  |||| ||| | |||| ||||| |||||||||||||||||||||    
T  26520351 ttatacataagtgcttatcatgataaacacttatgctagaagcagcaaattaagttgtttatccaaacagg 26520421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 27027 - 27088
Alignment:
Q  67 gcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    |||| ||||||||||  ||||||| |||||||||||| ||| ||||||||||||||| ||||    
T  27027 gcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaaacagaccct 27088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 65
Target Start/End: Original strand, 31076483 - 31076528
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataag 65  Q
    ||||||| |||||| ||||||||||||||| |||||||||||||||    
T  31076483 ttttatcttttgctctaaaaatagcttatgcaagcttatacataag 31076528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 42404086 - 42404147
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgt 72  Q
    ||||| || ||||||| ||||||||||||| ||| |||| || |||||||||||||||||||    
T  42404086 ttaacattattttatcttttgctataaaaagagcgtatgcaaacttatacataagtgcttgt 42404147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 1203236 - 1203303
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||| || ||||| |||||||||| ||||     ||||||||||||||| |||||||||||||||||    
T  1203236 agcttatacaaaaatgcttttcatgataagcactt-----ataagctgcaaataaattgtttatccaaacagg 1203303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Complemental strand, 4212851 - 4212811
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||| |||||||| ||||||||||||||||||||||||    
T  4212851 cttgtgctataagctgaaaataagttgtttatccaaacagg 4212811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 13216285 - 13216345
Alignment:
Q  4 aaacgacttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataa 64  Q
    |||||| |||||||| ||||||| ||||||||||||||| ||| |||||| |||| |||||    
T  13216285 aaacgatttaactttattttatcttttgctataaaaataacttgtgtaagtttatgcataa 13216345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 124
Target Start/End: Original strand, 27330186 - 27330226
Alignment:
Q  84 cttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||| ||||||| |||||||||||||||||||||||||    
T  27330186 cttgtgctataagctacaaataagttgtttatccaaacagg 27330226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 46592315 - 46592415
Alignment:
Q  28 tttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacaggccc 127  Q
    |||||||||||||||||| |||  ||||||| |||| |  ||| |||| |||||  |||||||  ||||||| ||||||| || |||| |||||||||||    
T  46592315 tttgctataaaaatagctcatgctagcttatgcataggcacttatcattataagtgcttgtgctttaagctgtaaataagctggttatacaaacaggccc 46592414  T
Q  128 t 128  Q
    |    
T  46592415 t 46592415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 74 - 122
Target Start/End: Original strand, 47119086 - 47119134
Alignment:
Q  74 atgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||  ||||||| ||||| |||||||||||||||||||||||||    
T  47119086 atgataagtgcttgtgctataagttgcaaataagttgtttatccaaaca 47119134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 52 - 122
Target Start/End: Complemental strand, 2987140 - 2987069
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaaca 122  Q
    |||||||| |||||||||| |||||||||  |||| ||  |||||||||||| ||| |||||||||||||||    
T  2987140 agcttataaataagtgcttatcatgataaacacttatgttataagctgcaaattaacttgtttatccaaaca 2987069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 11389474 - 11389407
Alignment:
Q  55 ttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||  ||| |||||||||| |||  ||  |||| ||||||||||||||||||||||||||    
T  11389474 ttatacataagcacttatcatgataagcactcatgatataaactgcaaataagttgtttatccaaaca 11389407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 92 - 131
Target Start/End: Original strand, 34430832 - 34430871
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggcccttaa 131  Q
    ||||||||||||||||||||||| ||||||||| ||||||    
T  34430832 ataagctgcaaataagttgtttaaccaaacaggaccttaa 34430871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 77
Target Start/End: Original strand, 3070061 - 3070127
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatga 77  Q
    |||||||| ||| || ||||| |||||||||| |||||||||||||||| || |||| || ||||||    
T  3070061 ttaactttatttgattatttgttataaaaataacttatgtaagcttatatatgagtgtttatcatga 3070127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 105
Target Start/End: Original strand, 16200090 - 16200164
Alignment:
Q  32 ctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgc-aataagctgcaaata 105  Q
    ||||||||||||||||||||| |||| || ||||||||| | ||||||||   |||||| |||||| ||||||||    
T  16200090 ctataaaaatagcttatgtaatcttacacgtaagtgcttattatgataagtgtttgtgctaataagttgcaaata 16200164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Complemental strand, 20108946 - 20108904
Alignment:
Q  86 tgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||| |||||||||||| |||||||||||||||| |||||||    
T  20108946 tgtgctataagctgcaaaaaagttgtttatccaaataggccct 20108904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 128
Target Start/End: Original strand, 39603594 - 39603636
Alignment:
Q  86 tgtgcaataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||| |||||||||||||||| |||||||||||| |||||||    
T  39603594 tgtgctataagctgcaaataagctgtttatccaaataggccct 39603636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 122
Target Start/End: Complemental strand, 49202557 - 49202527
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||||||||||||||||||||||    
T  49202557 ataagctgcaaataagttgtttatccaaaca 49202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 122
Target Start/End: Complemental strand, 25885785 - 25885756
Alignment:
Q  93 taagctgcaaataagttgtttatccaaaca 122  Q
    ||||||||||||||||||||||||||||||    
T  25885785 taagctgcaaataagttgtttatccaaaca 25885756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 30066885 - 30066958
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaa-taagttgtttatccaaacagg 124  Q
    |||||||||| |||||||| |||| |||||  ||| ||| |||||||||||| ||| |||||||| ||||||||    
T  30066885 agcttatacacaagtgcttatcattataagcgcttatgctataagctgcaaattaaattgtttatgcaaacagg 30066958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 133
Target Start/End: Original strand, 34213737 - 34213778
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggcccttaaca 133  Q
    ||||||||||||||||||| ||||||||||||| || |||||    
T  34213737 ataagctgcaaataagttgcttatccaaacaggaccataaca 34213778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 120
Target Start/End: Complemental strand, 22030120 - 22030092
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaa 120  Q
    |||||||||||||||||||||||||||||    
T  22030120 ataagctgcaaataagttgtttatccaaa 22030092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 23319759 - 23319727
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacagg 124  Q
    ||||||||||||||||||| |||||||||||||    
T  23319759 ataagctgcaaataagttgcttatccaaacagg 23319727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 124
Target Start/End: Original strand, 35571747 - 35571818
Alignment:
Q  52 agcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaacagg 124  Q
    |||||||||||||||| || |||| ||||| ||||  || |||| | ||||||||| ||||||||||||||||    
T  35571747 agcttatacataagtg-ttatcatcataagcacttccgctataaacggcaaataaggtgtttatccaaacagg 35571818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 39011215 - 39011251
Alignment:
Q  92 ataagctgcaaataagttgtttatccaaacaggccct 128  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  39011215 ataagctacaaataagtcgtttatccaaacaggccct 39011251  T

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Target: scaffold0018 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 158089 - 157970
Alignment:
Q  11 ttaactttgttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttg 110  Q
    ||||||||  |||||  ||| |||||||||||||||||||||||| || ||||||   || |||| |||||   |||||| |||||||||||||||| ||    
T  158089 ttaactttaatttatgtttttctataaaaatagcttatgtaagctaatgcataagcaattatcatcataagtgtttgtgctataagctgcaaataagctg 157990  T
Q  111 tttatccaaacaggccctta 130  Q
    ||||||||||||||||||||    
T  157989 tttatccaaacaggccctta 157970  T

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Target: scaffold0012 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 116
Target Start/End: Original strand, 207678 - 207774
Alignment:
Q  20 ttttatcatttgctataaaaatagcttatgtaagcttatacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatc 116  Q
    ||||||| |||| ||  ||||||||||||| |||||||||||||||||||| |||||||||| |||||||  || |  ||||||||||| |||||||    
T  207678 ttttatcttttgttactaaaatagcttatgcaagcttatacataagtgcttatcatgataagcacttgtggtatcacatgcaaataagtggtttatc 207774  T

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Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 58540 - 58475
Alignment:
Q  57 atacataagtgcttgtcatgataagaacttgtgcaataagctgcaaataagttgtttatccaaaca 122  Q
    |||||||||||||| | |||| ||| ||||||||  ||||||||||||||||||||||||||||||    
T  58540 atacataagtgcttattatgacaagcacttgtgctctaagctgcaaataagttgtttatccaaaca 58475  T

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