View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3582_low_95 (Length: 251)
Name: NF3582_low_95
Description: NF3582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3582_low_95 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 11150917 - 11150676
Alignment:
| Q |
1 |
cttagggtactggttagcattctccatattattaagtctcaaaatgtattgcttagtacaaaaatataacttctagataagtgatcaagtggggaaaaga |
100 |
Q |
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| T |
11150917 |
cttagggcagtggttagcattctccatattattaagtctcaaaatgtattgcttagtacaaaaatataacttctagataagtgatcaagtggggaaaaga |
11150818 |
T |
|
| Q |
101 |
agggcattgtatttcatcattttgagatagtttgtacaacacaatccaataacttagcaaaaccttttcatgttttttatttgtccactttccagatgct |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |
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| T |
11150817 |
agggcattgtatttcatcattttgagatagtttgtacaacacaatccaataacttagcaaaaccttttcattttttttatttatccactttccagatgct |
11150718 |
T |
|
| Q |
201 |
gcaaaagtagtgactgagatggcagataacactgattttctt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
11150717 |
gcaaaagtagtgactgagatggcagataacactgattttctt |
11150676 |
T |
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