View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3583_high_5 (Length: 312)

Name: NF3583_high_5
Description: NF3583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3583_high_5
NF3583_high_5
[»] chr4 (8 HSPs)
chr4 (139-301)||(35165493-35165657)
chr4 (1-69)||(35165660-35165728)
chr4 (68-119)||(14746768-14746819)
chr4 (68-115)||(17048323-17048370)
chr4 (68-128)||(53631432-53631492)
chr4 (68-119)||(26013366-26013417)
chr4 (79-128)||(19857417-19857466)
chr4 (68-128)||(13592101-13592161)
[»] scaffold0009 (1 HSPs)
scaffold0009 (68-128)||(85430-85490)
[»] chr7 (20 HSPs)
chr7 (68-128)||(8468602-8468662)
chr7 (68-128)||(17232803-17232863)
chr7 (68-128)||(14273399-14273459)
chr7 (68-128)||(14981611-14981671)
chr7 (68-128)||(16998477-16998537)
chr7 (68-119)||(8940134-8940185)
chr7 (68-119)||(46580860-46580911)
chr7 (68-139)||(15411070-15411147)
chr7 (68-139)||(15719880-15719957)
chr7 (68-139)||(16579643-16579720)
chr7 (68-139)||(16585943-16586020)
chr7 (68-128)||(14258335-14258395)
chr7 (68-128)||(15112828-15112888)
chr7 (68-115)||(1490243-1490290)
chr7 (75-128)||(16323943-16323996)
chr7 (68-128)||(16460941-16461001)
chr7 (75-128)||(32301179-32301232)
chr7 (79-119)||(10501491-10501531)
chr7 (79-119)||(14157172-14157212)
chr7 (68-128)||(32161019-32161079)
[»] scaffold0877 (1 HSPs)
scaffold0877 (68-128)||(2889-2949)
[»] scaffold0434 (1 HSPs)
scaffold0434 (68-128)||(7117-7177)
[»] scaffold0317 (1 HSPs)
scaffold0317 (68-128)||(7078-7138)
[»] scaffold0022 (1 HSPs)
scaffold0022 (68-128)||(54014-54074)
[»] chr8 (8 HSPs)
chr8 (68-128)||(19808538-19808598)
chr8 (68-128)||(22238194-22238254)
chr8 (68-128)||(22352921-22352981)
chr8 (68-128)||(23409680-23409740)
chr8 (68-119)||(17461237-17461288)
chr8 (69-128)||(44384845-44384904)
chr8 (68-115)||(5760566-5760613)
chr8 (75-128)||(37515597-37515650)
[»] chr5 (5 HSPs)
chr5 (68-128)||(6765713-6765773)
chr5 (76-119)||(33895830-33895873)
chr5 (68-128)||(22107610-22107670)
chr5 (68-114)||(29447888-29447934)
chr5 (78-119)||(263041-263082)
[»] chr3 (14 HSPs)
chr3 (68-128)||(14966053-14966113)
chr3 (68-128)||(52989898-52989958)
chr3 (68-119)||(11914201-11914252)
chr3 (68-128)||(324119-324179)
chr3 (68-128)||(17046195-17046255)
chr3 (68-128)||(24513825-24513885)
chr3 (68-128)||(17691884-17691944)
chr3 (79-119)||(36527756-36527796)
chr3 (68-128)||(43889802-43889862)
chr3 (68-128)||(54876566-54876626)
chr3 (79-128)||(16796381-16796430)
chr3 (32-69)||(53698909-53698946)
chr3 (68-112)||(17685711-17685755)
chr3 (68-128)||(18700483-18700543)
[»] chr2 (12 HSPs)
chr2 (68-128)||(21081912-21081972)
chr2 (68-128)||(23707464-23707524)
chr2 (68-128)||(24917995-24918055)
chr2 (68-128)||(27472304-27472364)
chr2 (68-128)||(34874388-34874448)
chr2 (68-119)||(22459747-22459798)
chr2 (68-139)||(24670880-24670957)
chr2 (75-139)||(24681308-24681376)
chr2 (70-128)||(23069459-23069517)
chr2 (75-128)||(18358909-18358962)
chr2 (68-128)||(24316260-24316320)
chr2 (68-111)||(20320791-20320834)
[»] chr1 (9 HSPs)
chr1 (68-128)||(12271439-12271499)
chr1 (68-128)||(51326677-51326737)
chr1 (68-128)||(48603337-48603397)
chr1 (68-128)||(50000647-50000707)
chr1 (68-119)||(27653407-27653458)
chr1 (67-128)||(22131071-22131132)
chr1 (81-128)||(46198543-46198590)
chr1 (75-139)||(48520403-48520473)
chr1 (68-128)||(20316521-20316581)
[»] scaffold0741 (1 HSPs)
scaffold0741 (68-119)||(6937-6988)
[»] scaffold0599 (1 HSPs)
scaffold0599 (68-119)||(1477-1528)
[»] scaffold0057 (1 HSPs)
scaffold0057 (68-127)||(70641-70700)
[»] scaffold0019 (1 HSPs)
scaffold0019 (68-119)||(21836-21887)
[»] scaffold0025 (1 HSPs)
scaffold0025 (70-128)||(78290-78348)
[»] scaffold0484 (1 HSPs)
scaffold0484 (68-128)||(737-797)
[»] scaffold0452 (1 HSPs)
scaffold0452 (68-128)||(13552-13612)
[»] scaffold0123 (1 HSPs)
scaffold0123 (68-128)||(422-482)
[»] scaffold0020 (1 HSPs)
scaffold0020 (68-116)||(169937-169985)
[»] scaffold0018 (1 HSPs)
scaffold0018 (68-128)||(20687-20747)
[»] scaffold0011 (1 HSPs)
scaffold0011 (68-128)||(125840-125900)
[»] chr6 (6 HSPs)
chr6 (68-128)||(22805817-22805877)
chr6 (68-115)||(15705632-15705679)
chr6 (68-115)||(15817708-15817755)
chr6 (68-115)||(17377986-17378033)
chr6 (68-128)||(19656188-19656248)
chr6 (68-119)||(28104083-28104135)
[»] scaffold1783 (1 HSPs)
scaffold1783 (68-115)||(302-349)
[»] scaffold0125 (1 HSPs)
scaffold0125 (68-119)||(2059-2110)
[»] scaffold0107 (1 HSPs)
scaffold0107 (68-119)||(10269-10320)
[»] scaffold0780 (1 HSPs)
scaffold0780 (75-128)||(3503-3556)
[»] scaffold1283 (1 HSPs)
scaffold1283 (68-128)||(1426-1486)
[»] scaffold0561 (1 HSPs)
scaffold0561 (79-119)||(10486-10526)
[»] scaffold0515 (1 HSPs)
scaffold0515 (68-128)||(4204-4264)
[»] scaffold0306 (1 HSPs)
scaffold0306 (68-128)||(4204-4264)
[»] scaffold0278 (1 HSPs)
scaffold0278 (68-128)||(7720-7780)
[»] scaffold0165 (2 HSPs)
scaffold0165 (68-112)||(3588-3632)
scaffold0165 (68-112)||(7652-7696)
[»] scaffold0032 (1 HSPs)
scaffold0032 (68-119)||(67146-67197)
[»] scaffold0436 (1 HSPs)
scaffold0436 (79-119)||(8044-8084)
[»] scaffold0156 (1 HSPs)
scaffold0156 (68-128)||(15626-15686)
[»] scaffold0034 (1 HSPs)
scaffold0034 (68-128)||(119893-119953)


Alignment Details
Target: chr4 (Bit Score: 150; Significance: 3e-79; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 139 - 301
Target Start/End: Complemental strand, 35165657 - 35165493
Alignment:
Q  139 tatccgaaatcaaaagaataaataaggatagaagcaaaactaattcaggctcaaatgaaggcattgccattctcccagagctcccacaaga--gagaaat 236  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  35165657 tatccgaaatcaaaagaataaataaggatagaagcaaaactaattcaggctcaaatgaaggcattgccattctcccagagctcccacaagagagagaaat 35165558  T
Q  237 atttctagttgaaatatgagaaaacatacaaggaaagaagggatatacagctatttgaagaataa 301  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35165557 atttctagttcaaatatgagaaaacatacaaggaaagaagggatatacagctatttgaagaataa 35165493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35165728 - 35165660
Alignment:
Q  1 taatagtatgtaactacgaattgtttgagtttatgcattgctgcatagtacttcatgctttccattgaa 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35165728 taatagtatgtaactacgaattgtttgagtttatgcattgctgcatagtacttcatactttccattgaa 35165660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 14746819 - 14746768
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  14746819 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 14746768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 17048370 - 17048323
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  17048370 aacttacaactttacaacttagaccaacacctgcaacttgatcaatat 17048323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 53631492 - 53631432
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| || |||| |||||||||||| ||| || |||||    
T  53631492 aacttacaactttacaacttagaccaacacttgcaacttgatcaatattcaacagcaacag 53631432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 26013366 - 26013417
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||| ||||| | ||||| ||||||||||||||||    
T  26013366 aacttacaactttacaacttaaaccaacatctgcaacttgatcaatatgcaa 26013417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 19857417 - 19857466
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||| ||||| ||||||||| |||||||||||||| || |||||    
T  19857417 ttacaacttaaaccaacacctgcatcctgatcaatatgcaacagcaacag 19857466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 13592161 - 13592101
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||| ||||||||||||||| |||| || |||||||||||| ||| || |||||    
T  13592161 aacttacaactctacaacttagaccaacaccttcaacttgatcaatattcaacagcaacag 13592101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 85430 - 85490
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  85430 aacttacaactttacaacttagaccaacacctgcatcttgatcaatatgcaacagcaacag 85490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 1e-16; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 8468602 - 8468662
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  8468602 aacttacaactttacaacttagaccaacacctgcatcttgatcaatatgcaacagcaacag 8468662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 17232803 - 17232863
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| || |||||    
T  17232803 aacttacaactttacaacttagaccaacacctgcatcttgatcaatatgcaacagcaacag 17232863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14273399 - 14273459
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| ||||||||||||||||| || ||||||| ||||||||||||||||||| |||||    
T  14273399 aacttacaactttacaacttagacaaacacctgcaacttgatcaatatgcaatagcaacag 14273459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 14981671 - 14981611
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  14981671 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 14981611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 16998477 - 16998537
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  16998477 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 16998537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 8940134 - 8940185
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  8940134 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 8940185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 46580911 - 46580860
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  46580911 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 46580860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 15411147 - 15411070
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat------gcaatagaaacagtacaagcaatt 139  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||      |||| |||||||||||||||||||    
T  15411147 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatacaacagcaacagaaacagtacaagcaatt 15411070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 15719880 - 15719957
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat------gcaatagaaacagtacaagcaatt 139  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||      |||| |||||||||||||||||||    
T  15719880 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcatcagcaacagaaacagtacaagcaatt 15719957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 16579643 - 16579720
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat------gcaatagaaacagtacaagcaatt 139  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||      ||||||||||||| ||||||||||    
T  16579643 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaatagaaacagcacaagcaatt 16579720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Complemental strand, 16586020 - 16585943
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat------gcaatagaaacagtacaagcaatt 139  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||      ||||||||||||| ||||||||||    
T  16586020 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaatagaaacagcacaagcaatt 16585943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14258335 - 14258395
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  14258335 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 14258395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 15112828 - 15112888
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||| ||||| || |||||    
T  15112828 aacttacaactttacaacttagaccaacacctgcaacttgatcaatgtgcaacagcaacag 15112888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 1490290 - 1490243
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  1490290 aacttacaactttacaacttagaccaacacctgcaacttgatcaatat 1490243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 16323943 - 16323996
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||||||||||||| ||| ||| |||||||||||||||| || |||||    
T  16323943 aactttacaacttagaccaacacccgcaacttgatcaatatgcaacagcaacag 16323996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 16461001 - 16460941
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| ||||||||||||||||| || ||||||| |||||||||||| ||| || |||||    
T  16461001 aacttacaactttacaacttagacaaacacctgcaacttgatcaatattcaacagcaacag 16460941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 32301179 - 32301232
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||||||||||||  ||||||| |||||||||||| ||| || |||||    
T  32301179 aactttacaacttagaccaccacctgcaacttgatcaatattcaacagcaacag 32301232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 10501531 - 10501491
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||||| ||||||| ||||||| ||||||||||||||||    
T  10501531 ttacaactcagaccaacacctgcaacttgatcaatatgcaa 10501491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 14157212 - 14157172
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||||||||||||| ||||| | ||||||||||||||||    
T  14157212 ttacaacttagaccaacacctggaacttgatcaatatgcaa 14157172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 32161079 - 32161019
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| || ||||||||||||||||| ||||| | ||| |||||||||||| || |||||    
T  32161079 aacttacaattttacaacttagaccaacacctgtaacttaatcaatatgcaacagcaacag 32161019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 2949 - 2889
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  2949 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaagagcaacag 2889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 7177 - 7117
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  7177 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 7117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 7138 - 7078
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  7138 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 7078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 54074 - 54014
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  54074 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 54014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 19808598 - 19808538
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  19808598 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 19808538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 22238254 - 22238194
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  22238254 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 22238194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 22352921 - 22352981
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  22352921 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 22352981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 23409680 - 23409740
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| |||||||  ||||||||||||||| || |||||    
T  23409680 aacttacaactttacaacttagaccaacacctgcaatttgatcaatatgcaacagcaacag 23409740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 17461288 - 17461237
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| ||||||||||||||||| || ||||||| ||||||||||||||||    
T  17461288 aacttacaactttacaacttagacaaacacctgcaacttgatcaatatgcaa 17461237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 44384904 - 44384845
Alignment:
Q  69 acttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    ||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  44384904 acttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 44384845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 5760566 - 5760613
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| || |||| ||||||||||||    
T  5760566 aacttacaactttacaacttagaccaacacttgcaacttgatcaatat 5760613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 37515597 - 37515650
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||| ||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  37515597 aactctacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 37515650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 6765713 - 6765773
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| || ||||||||||||||||||||| || |||||    
T  6765713 aacttacaactttacaacttagaccaacacatgcatcttgatcaatatgcaacagcaacag 6765773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 33895873 - 33895830
Alignment:
Q  76 actttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    ||||||||||||||||||||||||||| ||||||||||||||||    
T  33895873 actttacaacttagaccaatacctgcaacttgatcaatatgcaa 33895830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 22107670 - 22107610
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  22107670 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 22107610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 29447888 - 29447934
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaata 114  Q
    |||||| |||||||||||||||||||| ||||||| ||| |||||||    
T  29447888 aacttacaactttacaacttagaccaacacctgcaacttaatcaata 29447934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 119
Target Start/End: Original strand, 263041 - 263082
Alignment:
Q  78 tttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||    
T  263041 tttacaacttagacctatacctgcaacttgatctatatgcaa 263082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 14966053 - 14966113
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  14966053 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 14966113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 52989958 - 52989898
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  52989958 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 52989898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 11914252 - 11914201
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  11914252 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 11914201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 324119 - 324179
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  324119 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 324179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 17046195 - 17046255
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  17046195 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 17046255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 24513825 - 24513885
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||||||||| || |||||    
T  24513825 aacttacaactttaccacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 24513885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 17691944 - 17691884
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||| ||||||| || |||||    
T  17691944 aacttacaactttacaacttagatcaacacctgcaacttgatcattatgcaacagcaacag 17691884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 36527756 - 36527796
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  36527756 ttacaacttagaccaacacctgcaacttgatcaatatgcaa 36527796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 43889862 - 43889802
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| || ||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  43889862 aacttacaattttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 43889802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 54876626 - 54876566
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||| ||||||| || |||||    
T  54876626 aacttacaactttacaacttagatcaacacctgcaacttgatcattatgcaacagcaacag 54876566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 16796381 - 16796430
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  16796381 ttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 16796430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 69
Target Start/End: Original strand, 53698909 - 53698946
Alignment:
Q  32 tatgcattgctgcatagtacttcatgctttccattgaa 69  Q
    |||||||||||||| |||| ||||||||||||||||||    
T  53698909 tatgcattgctgcacagtaattcatgctttccattgaa 53698946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 112
Target Start/End: Complemental strand, 17685755 - 17685711
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaa 112  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||||    
T  17685755 aacttacaactttacaacttagatcaacacctgcaacttgatcaa 17685711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 18700543 - 18700483
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||| ||| ||||||| ||||||| |||| ||| || |||||    
T  18700543 aacttacaactttacaacttagatcaacacctgcaacttgatctatattcaacagcaacag 18700483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 21081972 - 21081912
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  21081972 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 21081912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 23707524 - 23707464
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  23707524 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 23707464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 24917995 - 24918055
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  24917995 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 24918055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 27472304 - 27472364
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  27472304 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 27472364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 34874448 - 34874388
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  34874448 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 34874388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 22459798 - 22459747
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  22459798 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 22459747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 139
Target Start/End: Original strand, 24670880 - 24670957
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat------gcaatagaaacagtacaagcaatt 139  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||      |||| |||||||||||||||||||    
T  24670880 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatacaacagcaacagaaacagtacaagcaatt 24670957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 24681308 - 24681376
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaata----tgcaatagaaacagtacaagcaatt 139  Q
    |||||||||||||||||||| ||||||| |||||||||||     |||| |||||||||||||||||||    
T  24681308 aactttacaacttagaccaacacctgcaacttgatcaatacaacagcaacagaaacagtacaagcaatt 24681376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 128
Target Start/End: Complemental strand, 23069517 - 23069459
Alignment:
Q  70 cttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  23069517 cttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 23069459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 18358962 - 18358909
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||||||||||||| | ||||| |||||||||||| |||||| |||||    
T  18358962 aactttacaacttagaccaacatctgcaacttgatcaatattcaatagcaacag 18358909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 24316320 - 24316260
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| ||||||  |||||||||||| ||||||| |||||||||||||||| || |||||    
T  24316320 aacttacaactttgtaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 24316260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 20320834 - 20320791
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatca 111  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||    
T  20320834 aacttataactttacaatttagaccaacacctgcaacttgatca 20320791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 12271439 - 12271499
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  12271439 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 12271499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 51326677 - 51326737
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||| ||||| |||||||||||||||||||||||| || |||||    
T  51326677 aacttacaactttacaacttataccaacacctgcatcttgatcaatatgcaacagcaacag 51326737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 48603337 - 48603397
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| ||||| |||||||||||||| ||||||| |||||||||||| |||||| |||||    
T  48603337 aacttacaacttaacaacttagaccaacacctgcaacttgatcaatattcaatagcaacag 48603397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 50000647 - 50000707
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||| ||||||||||| ||||||| |||||||||||||||| || |||||    
T  50000647 aacttacaactttaccacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 50000707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 27653458 - 27653407
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| ||||||| |||||||||||| | ||||||||||||||||||||||    
T  27653458 aacttacaactttataacttagaccaacatctgcatcttgatcaatatgcaa 27653407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 22131132 - 22131071
Alignment:
Q  67 gaacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    ||||||| |||||||||||||||||||| ||||||| ||| |||||||| ||| || |||||    
T  22131132 gaacttacaactttacaacttagaccaacacctgcaacttaatcaatattcaacagcaacag 22131071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 46198590 - 46198543
Alignment:
Q  81 acaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||||||| ||||||| |||||||||||||||| || |||||    
T  46198590 acaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 46198543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 139
Target Start/End: Original strand, 48520403 - 48520473
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaatat------gcaatagaaacagtacaagcaatt 139  Q
    |||||||||| ||||||||| ||||||| ||||||||||||      ||||||||||||| ||||||||||    
T  48520403 aactttacaatttagaccaacacctgcaacttgatcaatattcaacggcaatagaaacagcacaagcaatt 48520473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 20316521 - 20316581
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||| ||||||||| ||||| | |||||||||||| ||| || |||||    
T  20316521 aacttacaactttacaatttagaccaacacctgaaacttgatcaatattcaacagcaacag 20316581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0741 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0741
Description:

Target: scaffold0741; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 6988 - 6937
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  6988 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 6937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 1528 - 1477
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  1528 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 1477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 127
Target Start/End: Complemental strand, 70700 - 70641
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaaca 127  Q
    |||||| || ||||||||||||||||| ||||||| |||||||||||||||| |||||||    
T  70700 aacttacaattttacaacttagaccaacacctgcaacttgatcaatatgcaacagaaaca 70641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 21836 - 21887
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||||||    
T  21836 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaa 21887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 78290 - 78348
Alignment:
Q  70 cttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||| |||||||||||||||||||| ||||||| |||||||||||||||| || |||||    
T  78290 cttacaactttacaacttagaccaacacctgcaacttgatcaatatgcaacagcaacag 78348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 737 - 797
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  737 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 13612 - 13552
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| || |||| |||||||||||| |||||| |||||    
T  13612 aacttacaactttacaacttagaccaacacatgcaacttgatcaatattcaatagcaacag 13552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 422 - 482
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| ||||||||| |||||||||| ||||||| |||||||||||||||| || |||||    
T  422 aacttacaactttacagcttagaccaacacctgcaacttgatcaatatgcaacagcaacag 482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 116
Target Start/End: Complemental strand, 169985 - 169937
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatg 116  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||||    
T  169985 aacttacaactttacaacttagaccaacacctgcaacttgatcaatatg 169937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 20687 - 20747
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  20687 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 20747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 125840 - 125900
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  125840 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 125900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000007; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 22805817 - 22805877
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||||| ||| || |||||    
T  22805817 aacttacaactttacaacttagaccaacacctgcaacttgatcaatattcaacagcaacag 22805877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 15705679 - 15705632
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  15705679 aacttacaactttacaacttagaccaacacctgcaacttgatcaatat 15705632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 15817755 - 15817708
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  15817755 aacttacaactttacaacttagaccaacacctgcaacttgatcaatat 15817708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Complemental strand, 17378033 - 17377986
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  17378033 aacttacaactttacaacttagaccaacacctgcaacttgatcaatat 17377986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 19656248 - 19656188
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| ||||||||||||| |||||| || |||| |||||||||||| ||| || |||||    
T  19656248 aacttacaactttacaactttgaccaacacttgcaacttgatcaatattcaacagcaacag 19656188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 28104135 - 28104083
Alignment:
Q  68 aacttataactttacaa-cttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||| |||||||||| ||||| | ||||||||||||||||    
T  28104135 aacttacaactttacaaacttagaccaacacctgaaacttgatcaatatgcaa 28104083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1783 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1783
Description:

Target: scaffold1783; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 115
Target Start/End: Original strand, 302 - 349
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatat 115  Q
    |||||| |||||||||||||||||||| ||||||| ||||||||||||    
T  302 aacttacaactttacaacttagaccaacacctgcaacttgatcaatat 349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 2110 - 2059
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||||||||||||||||| ||||| | ||||||||||||||||    
T  2110 aacttacaactttacaacttagaccaacacctgtaacttgatcaatatgcaa 2059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 10320 - 10269
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| |||||| ||||||||||||| ||||||| ||||||||||||||||    
T  10320 aacttacaactttgcaacttagaccaacacctgcaacttgatcaatatgcaa 10269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0780 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0780
Description:

Target: scaffold0780; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 128
Target Start/End: Complemental strand, 3556 - 3503
Alignment:
Q  75 aactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||||||||||||||||| | ||||| |||||||||||||||| || |||||    
T  3556 aactttacaacttagaccaacatctgcaacttgatcaatatgcaacagcaacag 3503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Complemental strand, 1486 - 1426
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||||||||||||| || |||| |||||||||||| ||| || |||||    
T  1486 aacttacaactttacaacttagaccaacacttgcaacttgatcaatattcaacagcaacag 1426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 10486 - 10526
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||||||||||||| ||||||| ||||||||||||||||    
T  10486 ttacaacttagaccaacacctgcaacttgatcaatatgcaa 10526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0515 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 4204 - 4264
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| || ||||||||||||||||| |||||||  ||||||||||||||| || |||||    
T  4204 aacttacaattttacaacttagaccaacacctgcaatttgatcaatatgcaacagcaacag 4264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 4204 - 4264
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| || ||||||||||||||||| |||||||  ||||||||||||||| || |||||    
T  4204 aacttacaattttacaacttagaccaacacctgcaatttgatcaatatgcaacagcaacag 4264  T

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Target: scaffold0278 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 7720 - 7780
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    ||||||||||||||||| ||||| ||| ||||||| |||||||||||| ||| || |||||    
T  7720 aacttataactttacaatttagagcaacacctgcaacttgatcaatattcaacagcaacag 7780  T

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Target: scaffold0165 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 3588 - 3632
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaa 112  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||    
T  3588 aacttacaactttacaacttagaccaacacctgcaacttgatcaa 3632  T

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Target: scaffold0165; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 7652 - 7696
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaa 112  Q
    |||||| |||||||||||||||||||| ||||||| |||||||||    
T  7652 aacttacaactttacaacttagaccaacacctgcaacttgatcaa 7696  T

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Target: scaffold0032 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 68 - 119
Target Start/End: Original strand, 67146 - 67197
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||| ||||||| |||||||||||| ||||||| || |||||||||||||    
T  67146 aacttacaactttataacttagaccaacacctgcaactggatcaatatgcaa 67197  T

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Target: scaffold0436 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0436
Description:

Target: scaffold0436; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 8044 - 8084
Alignment:
Q  79 ttacaacttagaccaatacctgcatcttgatcaatatgcaa 119  Q
    |||||||||||||||| ||||||| ||| ||||||||||||    
T  8044 ttacaacttagaccaacacctgcaactttatcaatatgcaa 8084  T

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Target: scaffold0156 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 15626 - 15686
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||||||||| || |||||| || |||| |||||||||||||||| || |||||    
T  15626 aacttacaactttacaaattcgaccaacacttgcaacttgatcaatatgcaacagcaacag 15686  T

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Target: scaffold0034 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 128
Target Start/End: Original strand, 119893 - 119953
Alignment:
Q  68 aacttataactttacaacttagaccaatacctgcatcttgatcaatatgcaatagaaacag 128  Q
    |||||| |||| |||||||||||| || ||||||| |||||||||||| ||| || |||||    
T  119893 aacttacaactatacaacttagacaaacacctgcaacttgatcaatattcaacagcaacag 119953  T

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