View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3584_high_5 (Length: 332)
Name: NF3584_high_5
Description: NF3584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3584_high_5 |
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Alignment Details
Target: chr5 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 314
Target Start/End: Original strand, 2892074 - 2892387
Alignment:
| Q |
1 |
gtatcaaacgtagtacaaggattgttacatccacctggtaccttaagtggagtaggacactctccgttaatatccgcggtacaattaacggtaccacaag |
100 |
Q |
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| T |
2892074 |
gtatcaaacgtagtacaaggattgttacatccacctggtaccttaagtggagtaggacactctccgttaatatcggcggtacaattaacggtaccacaag |
2892173 |
T |
|
| Q |
101 |
aatttaaagacggttttaactgaattggaatattgaaaccttgtacaagcgaaacatcgtaaaaatcaaggtcgttatacatgttcaaagcaaattccat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2892174 |
aatttaaagacggttttaactgaattggaatattgaaaccttgtacaagcgaaacatcgtaaaaatcaaggtcgttatacatgttcaaagcaaattccat |
2892273 |
T |
|
| Q |
201 |
gattgtgtttggtggtgtaccaattgttttacactctagtgtcccattgcaatcaccggtttgacactttccgagacctgaattgtcgaaagtgcaattg |
300 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2892274 |
gattgtgtttggtggcgtaccaattgttttacactctagtgtcccattgcaatcaccggtttgacactttccgagacctgaattgtcgaaagtgcaattg |
2892373 |
T |
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| Q |
301 |
gttcgaccccagat |
314 |
Q |
| |
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|||||||||||||| |
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| T |
2892374 |
gttcgaccccagat |
2892387 |
T |
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