View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3584_high_7 (Length: 302)
Name: NF3584_high_7
Description: NF3584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3584_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 34818605 - 34818876
Alignment:
| Q |
16 |
attacgccagagacatatgtccaattttagcatctgaattacaattatgcttcaaaattcaaataggattacaattccggtggaaaggactatgtgaccn |
115 |
Q |
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|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |
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| T |
34818605 |
attacgccggagacagatgtccaattttagcatctgaattacaattatgcttcaaaattcaaataggatcacaattccggtggaaaggactatatgacca |
34818704 |
T |
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| Q |
116 |
nnnnnntaaatgtactcattgattacattgccttgaattatatatatttaatgtaaagtcaacatatcacttaagtttgacatgtctagaactataactg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
34818705 |
aaaaaataaatgtactcattgattacattgccttgaattatatatatttaatgtaaagtcaacatatcacttaagtttgacatgtccagaactataactg |
34818804 |
T |
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| Q |
216 |
catagtaatgtcaccaatggttgcatgaaacgttgcatgaaatttcttcttgtgagcattggaaagacaaat |
287 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34818805 |
catagtaatgtcaccaatggttgcatgaaacgttgcatgaaatttcttcttgtgagcattggaaagacaaat |
34818876 |
T |
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