View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3584_low_14 (Length: 279)
Name: NF3584_low_14
Description: NF3584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3584_low_14 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 33 - 270
Target Start/End: Complemental strand, 38078901 - 38078663
Alignment:
| Q |
33 |
gatttgaaagaagacgttgcatccggtcaaattattaatgctacctt-gatcatcatataaatgtaaatcgatttcttcaagccaatcaaagccttgggt |
131 |
Q |
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| T |
38078901 |
gatttgaaagaagacgttgcatccgatcaaattattaatgctacctttgatcatcatagaaatgtcaatcgatttcttcaagccaatcaaagccttgagt |
38078802 |
T |
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| Q |
132 |
ctcagaaaattaactaaccttagattaacacgtaatagctttttaggttaaaatccatcgcaatgtaagacaaccctcttggatgtcattcataagattc |
231 |
Q |
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| T |
38078801 |
ctcagaaaattaattaaccttagattaacacgtaatagctttttaggttaaaatccattgcaatgtaagacaaccctcttggatgtcattcataagattc |
38078702 |
T |
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| Q |
232 |
aatgttaaccttccaattatttgaaggcattcacaggtt |
270 |
Q |
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| T |
38078701 |
aatgttaaccttccaattatttgaaggcattcacaggtt |
38078663 |
T |
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