View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3584_low_41 (Length: 210)

Name: NF3584_low_41
Description: NF3584
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3584_low_41
NF3584_low_41
[»] chr7 (49 HSPs)
chr7 (17-196)||(1360242-1360422)
chr7 (18-136)||(3904707-3904826)
chr7 (24-183)||(34310812-34310970)
chr7 (22-189)||(22269881-22270047)
chr7 (18-156)||(5116544-5116682)
chr7 (18-128)||(23555006-23555118)
chr7 (18-136)||(26639280-26639398)
chr7 (17-136)||(4586120-4586240)
chr7 (18-136)||(4253619-4253738)
chr7 (22-196)||(4508800-4508973)
chr7 (22-136)||(14069927-14070042)
chr7 (22-136)||(14379955-14380070)
chr7 (22-136)||(27347776-27347891)
chr7 (22-136)||(31105487-31105602)
chr7 (18-128)||(35853881-35853992)
chr7 (22-136)||(47674037-47674152)
chr7 (22-136)||(48491538-48491653)
chr7 (22-183)||(6431885-6432045)
chr7 (24-196)||(2361068-2361238)
chr7 (18-128)||(4178741-4178852)
chr7 (24-196)||(29608637-29608809)
chr7 (22-136)||(48489390-48489505)
chr7 (19-136)||(23343934-23344052)
chr7 (18-128)||(29991021-29991131)
chr7 (101-167)||(23794001-23794066)
chr7 (24-136)||(31518754-31518867)
chr7 (24-196)||(48599430-48599601)
chr7 (16-128)||(25767049-25767159)
chr7 (22-196)||(2390183-2390356)
chr7 (16-174)||(8359405-8359562)
chr7 (22-136)||(30024826-30024941)
chr7 (22-136)||(43864203-43864318)
chr7 (22-136)||(47676230-47676345)
chr7 (24-136)||(24525992-24526106)
chr7 (33-135)||(40808550-40808652)
chr7 (22-118)||(26417294-26417390)
chr7 (25-136)||(41317531-41317643)
chr7 (18-83)||(43363564-43363629)
chr7 (140-196)||(6360123-6360179)
chr7 (22-136)||(18126603-18126718)
chr7 (22-136)||(31733063-31733178)
chr7 (24-183)||(3258908-3259067)
chr7 (16-128)||(48408769-48408882)
chr7 (116-185)||(4510736-4510804)
chr7 (65-136)||(36146545-36146617)
chr7 (116-180)||(4512578-4512641)
chr7 (22-136)||(4538634-4538749)
chr7 (22-136)||(12097953-12098068)
chr7 (18-136)||(36574606-36574724)
[»] chr5 (37 HSPs)
chr5 (18-196)||(316663-316840)
chr5 (18-167)||(35616098-35616247)
chr5 (22-196)||(38746906-38747079)
chr5 (38-183)||(4160546-4160689)
chr5 (24-196)||(40147162-40147333)
chr5 (33-147)||(10700753-10700868)
chr5 (22-181)||(213381-213539)
chr5 (18-128)||(13239718-13239829)
chr5 (22-136)||(42428524-42428639)
chr5 (18-128)||(25412728-25412838)
chr5 (23-136)||(3325873-3325986)
chr5 (23-144)||(10054911-10055032)
chr5 (18-128)||(30182555-30182666)
chr5 (22-136)||(39468643-39468758)
chr5 (64-196)||(5057948-5058079)
chr5 (18-128)||(30683014-30683122)
chr5 (22-136)||(533728-533843)
chr5 (22-136)||(13488162-13488277)
chr5 (22-183)||(28278230-28278390)
chr5 (18-128)||(13343027-13343139)
chr5 (61-142)||(30793081-30793162)
chr5 (22-136)||(537984-538099)
chr5 (18-136)||(13695781-13695900)
chr5 (29-136)||(19806343-19806449)
chr5 (38-196)||(27015433-27015589)
chr5 (18-128)||(36074132-36074246)
chr5 (22-117)||(16452059-16452154)
chr5 (118-186)||(21205842-21205910)
chr5 (22-136)||(28750749-28750864)
chr5 (22-136)||(32636783-32636898)
chr5 (22-136)||(42426329-42426444)
chr5 (18-91)||(9049432-9049505)
chr5 (131-196)||(14689614-14689678)
chr5 (20-81)||(22097879-22097940)
chr5 (17-112)||(6016992-6017086)
chr5 (96-183)||(16641108-16641195)
chr5 (16-180)||(27637701-27637865)
[»] chr6 (23 HSPs)
chr6 (18-179)||(25073485-25073646)
chr6 (22-183)||(21593578-21593738)
chr6 (25-196)||(26830220-26830391)
chr6 (18-128)||(5413484-5413594)
chr6 (108-174)||(5740970-5741036)
chr6 (18-128)||(5406290-5406400)
chr6 (18-128)||(5410615-5410725)
chr6 (18-128)||(31404765-31404875)
chr6 (24-183)||(5043541-5043699)
chr6 (22-196)||(2973033-2973206)
chr6 (19-128)||(2171622-2171732)
chr6 (16-196)||(3808797-3808975)
chr6 (19-128)||(16452420-16452531)
chr6 (22-136)||(9183125-9183240)
chr6 (24-196)||(17762890-17763062)
chr6 (18-126)||(30834626-30834736)
chr6 (25-136)||(4045382-4045494)
chr6 (22-136)||(28137502-28137617)
chr6 (139-183)||(603290-603334)
chr6 (22-91)||(17758027-17758097)
chr6 (22-91)||(21588935-21589005)
chr6 (22-136)||(3038997-3039112)
chr6 (18-128)||(33160442-33160555)
[»] chr1 (57 HSPs)
chr1 (18-195)||(41135721-41135898)
chr1 (23-196)||(37879006-37879178)
chr1 (18-180)||(22079237-22079394)
chr1 (22-196)||(11348599-11348772)
chr1 (18-126)||(12318613-12318721)
chr1 (16-196)||(37033161-37033340)
chr1 (18-119)||(9109510-9109611)
chr1 (16-196)||(47115072-47115251)
chr1 (22-196)||(13547183-13547356)
chr1 (22-180)||(29136164-29136321)
chr1 (23-196)||(19754395-19754568)
chr1 (16-179)||(37168215-37168377)
chr1 (24-183)||(42298071-42298229)
chr1 (18-123)||(2263065-2263174)
chr1 (22-136)||(49918309-49918424)
chr1 (23-136)||(37503649-37503763)
chr1 (24-141)||(4535577-4535693)
chr1 (18-167)||(6808375-6808530)
chr1 (24-124)||(1050540-1050640)
chr1 (22-196)||(13549094-13549267)
chr1 (22-136)||(28220320-28220435)
chr1 (116-196)||(28242289-28242368)
chr1 (22-136)||(28265648-28265763)
chr1 (22-127)||(3156833-3156939)
chr1 (22-136)||(41360874-41360988)
chr1 (22-183)||(47255434-47255594)
chr1 (24-196)||(193512-193683)
chr1 (23-185)||(19752597-19752759)
chr1 (18-128)||(20762638-20762750)
chr1 (22-134)||(28223515-28223628)
chr1 (24-136)||(44455119-44455232)
chr1 (27-158)||(49893693-49893825)
chr1 (22-136)||(4552731-4552846)
chr1 (22-136)||(31659197-31659312)
chr1 (16-183)||(7482319-7482486)
chr1 (16-107)||(13938126-13938216)
chr1 (101-168)||(16216671-16216737)
chr1 (26-109)||(30670080-30670162)
chr1 (25-167)||(33775839-33775980)
chr1 (17-196)||(34603476-34603655)
chr1 (24-136)||(8550883-8550996)
chr1 (18-91)||(13316442-13316516)
chr1 (18-107)||(16914265-16914355)
chr1 (24-93)||(36683692-36683762)
chr1 (18-136)||(928066-928186)
chr1 (18-128)||(3189297-3189408)
chr1 (18-128)||(3198114-3198225)
chr1 (18-128)||(3206953-3207064)
chr1 (22-132)||(16455585-16455695)
chr1 (112-159)||(28317803-28317849)
chr1 (64-136)||(1833481-1833554)
chr1 (41-111)||(6398631-6398700)
chr1 (95-168)||(41053224-41053297)
chr1 (18-75)||(1485861-1485918)
chr1 (150-183)||(31925927-31925960)
chr1 (22-136)||(37559962-37560078)
chr1 (22-136)||(50167269-50167384)
[»] chr3 (52 HSPs)
chr3 (18-196)||(20937557-20937734)
chr3 (18-183)||(26323164-26323330)
chr3 (22-183)||(46860386-46860548)
chr3 (18-185)||(5433966-5434134)
chr3 (23-185)||(30236037-30236198)
chr3 (24-196)||(4569852-4570024)
chr3 (18-147)||(35138796-35138926)
chr3 (22-136)||(5236550-5236665)
chr3 (18-136)||(1313895-1314014)
chr3 (18-128)||(45095131-45095241)
chr3 (24-196)||(34491114-34491284)
chr3 (16-183)||(49199558-49199724)
chr3 (22-180)||(54593621-54593778)
chr3 (22-183)||(6095693-6095853)
chr3 (18-128)||(5258234-5258346)
chr3 (24-136)||(51398773-51398886)
chr3 (18-128)||(23200228-23200338)
chr3 (23-107)||(4055860-4055943)
chr3 (18-118)||(5373209-5373311)
chr3 (18-128)||(7762232-7762343)
chr3 (116-196)||(36018752-36018831)
chr3 (26-141)||(1683431-1683546)
chr3 (23-129)||(3148086-3148193)
chr3 (23-136)||(44700573-44700687)
chr3 (28-122)||(50432754-50432849)
chr3 (18-128)||(5260413-5260525)
chr3 (24-136)||(40734457-40734570)
chr3 (22-133)||(22835096-22835208)
chr3 (18-128)||(23198029-23198139)
chr3 (18-126)||(33191801-33191910)
chr3 (18-118)||(37408436-37408536)
chr3 (18-128)||(7764434-7764542)
chr3 (18-136)||(19683979-19684098)
chr3 (140-183)||(47304165-47304208)
chr3 (22-91)||(29813067-29813137)
chr3 (24-136)||(39153457-39153570)
chr3 (22-136)||(29196480-29196596)
chr3 (25-136)||(44331504-44331616)
chr3 (22-136)||(29810827-29810942)
chr3 (22-136)||(31314404-31314519)
chr3 (17-141)||(36796740-36796864)
chr3 (139-183)||(40913253-40913297)
chr3 (61-163)||(25173626-25173727)
chr3 (24-136)||(32891062-32891176)
chr3 (29-167)||(39127475-39127614)
chr3 (16-183)||(41819611-41819778)
chr3 (18-128)||(9636216-9636328)
chr3 (24-136)||(43401898-43402010)
chr3 (24-132)||(53921599-53921708)
chr3 (65-125)||(2020119-2020179)
chr3 (24-169)||(31340297-31340441)
chr3 (23-118)||(40735361-40735456)
[»] chr4 (55 HSPs)
chr4 (18-169)||(32091405-32091556)
chr4 (16-196)||(2209614-2209793)
chr4 (23-124)||(44967924-44968026)
chr4 (18-196)||(22882841-22883021)
chr4 (18-196)||(22934505-22934685)
chr4 (23-183)||(40632359-40632518)
chr4 (18-136)||(48143001-48143121)
chr4 (18-124)||(6677440-6677547)
chr4 (18-183)||(12119451-12119617)
chr4 (40-144)||(38811301-38811405)
chr4 (22-196)||(54882921-54883094)
chr4 (18-128)||(56178727-56178838)
chr4 (61-183)||(41961324-41961452)
chr4 (22-136)||(34570508-34570623)
chr4 (25-196)||(55085462-55085632)
chr4 (22-196)||(379279-379454)
chr4 (24-196)||(50673943-50674113)
chr4 (17-136)||(5871779-5871899)
chr4 (16-124)||(21703925-21704033)
chr4 (17-136)||(37229811-37229931)
chr4 (22-136)||(5429638-5429753)
chr4 (22-136)||(54200000-54200115)
chr4 (16-183)||(46703413-46703580)
chr4 (22-196)||(8665308-8665482)
chr4 (24-183)||(12073306-12073464)
chr4 (22-136)||(12739644-12739759)
chr4 (22-136)||(12747850-12747965)
chr4 (29-196)||(35369542-35369708)
chr4 (22-136)||(36994483-36994598)
chr4 (25-136)||(47038507-47038618)
chr4 (22-136)||(52095456-52095571)
chr4 (18-121)||(34112790-34112895)
chr4 (22-178)||(41639345-41639500)
chr4 (22-183)||(50262795-50262952)
chr4 (18-136)||(4587917-4588037)
chr4 (61-136)||(6766209-6766285)
chr4 (22-128)||(9927552-9927659)
chr4 (22-136)||(26175730-26175845)
chr4 (18-141)||(33089832-33089956)
chr4 (22-136)||(36463483-36463598)
chr4 (22-128)||(37740592-37740699)
chr4 (18-128)||(29999897-30000007)
chr4 (94-165)||(43135551-43135622)
chr4 (20-136)||(5207934-5208051)
chr4 (18-83)||(34788865-34788930)
chr4 (24-91)||(26364240-26364308)
chr4 (20-126)||(48142470-48142577)
chr4 (18-136)||(6542269-6542390)
chr4 (24-136)||(24969071-24969184)
chr4 (44-118)||(27994798-27994871)
chr4 (18-130)||(5370173-5370290)
chr4 (22-136)||(12745530-12745645)
chr4 (139-183)||(35662354-35662398)
chr4 (16-131)||(52065561-52065676)
chr4 (22-136)||(52082751-52082866)
[»] chr8 (46 HSPs)
chr8 (24-196)||(44353693-44353865)
chr8 (18-126)||(41266938-41267047)
chr8 (22-196)||(4283425-4283598)
chr8 (23-183)||(10240071-10240227)
chr8 (18-128)||(42498160-42498272)
chr8 (18-136)||(8965781-8965900)
chr8 (22-136)||(15212745-15212860)
chr8 (22-136)||(27811237-27811352)
chr8 (24-123)||(29796418-29796518)
chr8 (22-196)||(42435085-42435258)
chr8 (18-136)||(3231886-3232005)
chr8 (24-196)||(11383887-11384057)
chr8 (25-196)||(33655402-33655572)
chr8 (18-128)||(34254421-34254531)
chr8 (53-128)||(38863838-38863913)
chr8 (22-183)||(40221659-40221819)
chr8 (18-128)||(31218223-31218335)
chr8 (101-167)||(40535767-40535833)
chr8 (25-136)||(43036382-43036494)
chr8 (22-136)||(4731617-4731732)
chr8 (18-124)||(11712091-11712198)
chr8 (22-136)||(19491793-19491907)
chr8 (24-136)||(30291565-30291679)
chr8 (18-128)||(12702724-12702840)
chr8 (18-128)||(17982619-17982731)
chr8 (24-196)||(40328680-40328851)
chr8 (24-136)||(41364943-41365056)
chr8 (18-115)||(11137007-11137103)
chr8 (24-125)||(32902270-32902371)
chr8 (21-128)||(7444911-7445019)
chr8 (18-117)||(7597592-7597692)
chr8 (22-136)||(18141780-18141894)
chr8 (22-136)||(33352109-33352224)
chr8 (18-118)||(34256597-34256696)
chr8 (18-128)||(1746308-1746420)
chr8 (23-128)||(19945455-19945562)
chr8 (24-76)||(4162517-4162569)
chr8 (18-128)||(44303820-44303933)
chr8 (62-136)||(4155055-4155129)
chr8 (24-135)||(1292559-1292671)
chr8 (58-91)||(25689959-25689992)
chr8 (22-118)||(40321058-40321154)
chr8 (99-132)||(40585677-40585710)
chr8 (66-136)||(5689230-5689301)
chr8 (22-89)||(30143346-30143414)
chr8 (19-75)||(30909389-30909445)
[»] chr2 (37 HSPs)
chr2 (18-119)||(30218135-30218236)
chr2 (18-141)||(42261576-42261703)
chr2 (22-196)||(35446978-35447151)
chr2 (22-196)||(1631826-1631999)
chr2 (20-118)||(24197873-24197974)
chr2 (18-130)||(6595096-6595210)
chr2 (22-136)||(11151685-11151800)
chr2 (22-136)||(11690460-11690575)
chr2 (22-136)||(29867828-29867943)
chr2 (18-128)||(36205754-36205865)
chr2 (22-136)||(42362311-42362426)
chr2 (18-128)||(5723346-5723456)
chr2 (23-136)||(13121728-13121842)
chr2 (23-196)||(45726830-45727002)
chr2 (18-128)||(4503222-4503334)
chr2 (22-134)||(38312201-38312314)
chr2 (18-128)||(45099721-45099833)
chr2 (18-130)||(30833310-30833423)
chr2 (18-128)||(2334508-2334619)
chr2 (18-136)||(7815363-7815482)
chr2 (101-169)||(16676152-16676219)
chr2 (18-176)||(33648089-33648249)
chr2 (18-128)||(4484421-4484532)
chr2 (58-124)||(28671901-28671967)
chr2 (24-136)||(36773521-36773634)
chr2 (61-141)||(42261751-42261835)
chr2 (96-196)||(17450491-17450591)
chr2 (22-136)||(36318103-36318218)
chr2 (18-128)||(41446105-41446217)
chr2 (18-126)||(42019963-42020071)
chr2 (22-196)||(42288204-42288377)
chr2 (24-136)||(17057465-17057578)
chr2 (24-136)||(17085448-17085561)
chr2 (95-136)||(29989757-29989798)
chr2 (17-136)||(36271624-36271745)
chr2 (30-115)||(41454215-41454300)
chr2 (31-103)||(35214236-35214308)
[»] scaffold0002 (3 HSPs)
scaffold0002 (18-141)||(490411-490538)
scaffold0002 (18-128)||(434499-434611)
scaffold0002 (61-141)||(490586-490670)
[»] scaffold0286 (1 HSPs)
scaffold0286 (24-179)||(11476-11629)
[»] scaffold0219 (1 HSPs)
scaffold0219 (24-136)||(27539-27652)
[»] scaffold0014 (1 HSPs)
scaffold0014 (22-196)||(80377-80550)
[»] scaffold1519 (1 HSPs)
scaffold1519 (18-128)||(883-994)
[»] scaffold0466 (1 HSPs)
scaffold0466 (22-196)||(7229-7401)
[»] scaffold0066 (1 HSPs)
scaffold0066 (22-136)||(20509-20624)
[»] scaffold0016 (1 HSPs)
scaffold0016 (18-128)||(114569-114680)
[»] scaffold0491 (1 HSPs)
scaffold0491 (18-128)||(11252-11363)
[»] scaffold0137 (1 HSPs)
scaffold0137 (64-125)||(10986-11048)


Alignment Details
Target: chr7 (Bit Score: 169; Significance: 8e-91; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 17 - 196
Target Start/End: Original strand, 1360242 - 1360422
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1360242 aaaaagggttacaagaaattcgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 1360341  T
Q  117 ttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacccccc-aaagagaaccaatccatatcctttg 196  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1360342 ttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaaagagaaccaatccatatcctttg 1360422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 3904707 - 3904826
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    ||||| |||||||||||||   ||||| | | |||| |||| |||||||||||||||||| ||||||||||||| | | | |||||||||||||||||||    
T  3904707 aaaagtgttacaagaaattacattcaataggctctcaaagaacaaaacctaatttctaccattttcccaatctcttcctaagaacaagagactcaatgat 3904806  T
Q  117 ttcactcaccaaaggtgttt 136  Q
    ||||||| || |||||||||    
T  3904807 ttcactcgcccaaggtgttt 3904826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 34310812 - 34310970
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| |||||||||| ||| | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |||    
T  34310812 gttacaagaaattagcttcaacaatttcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttcac 34310909  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    || || ||||||||| | |||| |||  ||||||||||||||||||||| ||||||||||||    
T  34310910 tctcccaaggtgtttac-aattatttcccaactctagaatctaacccccaaaagagaaccaa 34310970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 189
Target Start/End: Complemental strand, 22270047 - 22269881
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--ttt 118  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||  |||    
T  22270047 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgaatttt 22269950  T
Q  119 cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccata 189  Q
    ||||| || |||||||||   ||||||||  ||||||||||||||||||||| |||||||||||| |||||    
T  22269949 cactctcccaaggtgtttag-aattgtttc-caactctagaatctaacccccaaaagagaaccaacccata 22269881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 156
Target Start/End: Complemental strand, 5116682 - 5116544
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||| |||||| |||||  |||||||||  | |||||||  |||||||||||||||  |||||| |||||| | |||| |||||||||||||||||||    
T  5116682 aaaaggtttacaataaattatcttcaacaaactatccaagaacaaacctaatttctactcttttcctaatctcctcccataaacaagagactcaatgatt 5116583  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactct 156  Q
    |||| | || || |||||| ||| ||||||  |||||||    
T  5116582 tcacccgcccaatgtgttttccatttgtttcccaactct 5116544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 23555118 - 23555006
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||| ||||||||||||| |||||||||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  23555118 aaaagtgttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccattttttcccaatctca-ccaatgaacaagacactcaatga 23555020  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  23555019 ttttcactcaccaa 23555006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 26639398 - 26639280
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||||||||||||||||  | |||||||  |||||||||  | |||||||||||||| ||||| ||||||| | |||  || ||||||||||||||||    
T  26639398 aaaagggttacaagaaattaacatcaacaaactctccaagaacatacctaatttctaccattttcacaatctcttcccaaaaagaagagactcaatgatt 26639299  T
Q  118 tcactcaccaaaggtgttt 136  Q
    | ||||||| || ||||||    
T  26639298 ttactcacctaaagtgttt 26639280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 4586240 - 4586120
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||| ||||||||| ||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| |||||||||    
T  4586240 aaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatga 4586142  T
Q  116 ttt-cactcaccaaaggtgttt 136  Q
    ||| |||||||| |||||||||    
T  4586141 tttacactcacccaaggtgttt 4586120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 4253619 - 4253738
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    |||||||||||| |||||| ||||||||||| || | ||| ||||| ||||||||||||| |||| ||||| |||  | |||||||||| |||||||||     
T  4253619 aaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccctaatttctaccattttaccaatttca-ccaatgaacaagaaactcaatgat 4253717  T
Q  116 tttcactcaccaaaggtgttt 136  Q
    ||||||||||| |||||||||    
T  4253718 tttcactcacctaaggtgttt 4253738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 4508800 - 4508973
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||| ||| || | ||||  || |||||||||||| | ||||||||||||||  | || ||||||| ||||| |||||| |    
T  4508800 gggttacaagaaattagcttcaataagctcacaaagaacaaccctaatttctactcattttcccaatctcac-caatcaacaagacactca-tgattttc 4508897  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  |||||||||||||||||||   ||||||||||||||| || ||||||    
T  4508898 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccataaaagagaaccaatccttagcctttg 4508973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 14069927 - 14070042
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| |||||||||||||||||  | |||||||||| ||||||||| ||||    
T  14069927 gggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgattttc 14070025  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  14070026 actcacccaaggtgttt 14070042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 14379955 - 14380070
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| |||||||||||||||||  | |||||||||| ||||||||| ||||    
T  14379955 gggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgattttc 14380053  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  14380054 actcacccaaggtgttt 14380070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 27347891 - 27347776
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  27347891 gggttacaagaaattagcttcaacaagttcacaaagaacaatcctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 27347793  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| || ||||||    
T  27347792 actcacccaatgtgttt 27347776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 31105487 - 31105602
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | |||| |||| |||||||||| || ||||||||||||||    |||||||||| ||||||||| ||||    
T  31105487 gggttacaagaaattagcttcaacaagctcacaaagaaaaaatctaatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttc 31105585  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  31105586 actcacccaaggtgttt 31105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 35853992 - 35853881
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| |||||||||||||||||  | |||||||||| |||||||||     
T  35853992 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgat 35853894  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  35853893 tttcactcaccaa 35853881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 47674037 - 47674152
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  47674037 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttc 47674135  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  47674136 actcacccaaggtgttt 47674152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 48491653 - 48491538
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  48491653 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 48491555  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| || ||||||    
T  48491554 actcacccaaagtgttt 48491538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 6432045 - 6431885
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  |||||||||||| |  | |||||||||| ||||| |||||| |    
T  6432045 gggttacaagaaattagcttcaacaagctcacaaagaacaatcctaatttctacccattttcccaatctaac-caatgaacaagacactca-tgattttc 6431948  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || || |||||| | ||||||||  ||||||||||||||||||| | ||||||||||||    
T  6431947 actctcccaatgtgtttac-aattgtttcccaactctagaatctaaccctcaaaagagaaccaa 6431885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 2361068 - 2361238
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| ||||||||||| || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| |||| |||| ||||||    
T  2361068 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactc-atgattttcac 2361165  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    || || |||||||||  |||||||||  |||||||||||||||| || | |||||||||||| || || ||||||    
T  2361166 tctcccaaggtgttt-acaattgtttcccaactctagaatctaa-cctcaaaagagaaccaacccttagcctttg 2361238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 4178852 - 4178741
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||   ||||||| | ||||  || |||||||||||||| ||||||||||||||  | |||||||||| |||||||||     
T  4178852 aaaagggttacaagaaattagctttcccaagttcacaaagaacaaccctaatttctaccttttttcccaatctca-ccaatgaacaagacactcaatgat 4178754  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  4178753 tttcactcaccaa 4178741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 29608809 - 29608637
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--tttca 120  Q
    ||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | | |||||||| ||||| |||  ||||     
T  29608809 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caaagaacaagacactca-tgaagtttcg 29608712  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||| |  ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  29608711 ctctctcaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 29608637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 48489505 - 48489390
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||||| || ||||  || ||||||||||| || ||||||||||||||  | |||||||||| | | ||||| ||||    
T  48489505 gggttacaagaaattagcttcaacaagttttcaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacatttaatgattttc 48489407  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  48489406 actcacccaaggtgttt 48489390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 23344052 - 23343934
Alignment:
Q  19 aaagggttacaagaaatttgcttcaacaagttctccaagacaaaacc-taatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    |||||||||||||||||| ||||||||||| || | ||||  ||||| ||||||||||| |||||| |||||||  | |||||| ||| | ||||||| |    
T  23344052 aaagggttacaagaaattagcttcaacaagctcacaaagaataaaccttaatttctacccttttccaaatctca-ccaatgaactagacattcaatgatt 23343954  T
Q  117 ttcactcaccaaaggtgttt 136  Q
    |||||||||| |||||||||    
T  23343953 ttcactcacccaaggtgttt 23343934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 29991131 - 29991021
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | || |  || ||||||||||| | ||||||||||||||  | |||||||||| ||||||||| |    
T  29991131 aaaagggttacaagaaattagctttgacaagttcacaaataacaaccctaatttctatccttttcccaatctca-ccaatgaacaagacactcaatgatt 29991033  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  29991032 ttcactcaccaa 29991021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 167
Target Start/End: Original strand, 23794001 - 23794066
Alignment:
Q  101 caagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacc 167  Q
    ||||||||||||||||||| || ||| || |||||| | ||||||||||||||||||||||||||||    
T  23794001 caagagactcaatgatttccct-acccaatgtgtttacaaattgtttttcaactctagaatctaacc 23794066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 31518867 - 31518754
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||| | ||||||| ||| || | ||||  ||||||||||||||||| ||||||||||||||  | |||||||||| |||| |||| ||||||    
T  31518867 gttacaagaaactagcttcaataagctcacaaagaacaaacctaatttctacctattttcccaatctca-ccaatgaacaagacactcgatgattttcac 31518769  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  31518768 tcacccaaggtgttt 31518754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 48599430 - 48599601
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| ||||||||||| || | ||||  || ||||||||||| || |||||||||| |||  | |||||||||| | || |||| ||||||    
T  48599430 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatatca-ccaatgaacaagacaatc-atgattttcac 48599527  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||  | |||||||||  |||||||||  |||||||||||| |||||||| |||||||||||| || || ||||||    
T  48599528 tcctccaaggtgttt-acaattgtttcccaactctagaatataacccccaaaagagaaccaacccttagcctttg 48599601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Original strand, 25767049 - 25767159
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| ||||||| |||||||||    |||||||||| ||||||||    
T  25767049 caaaaggggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttccaatctca----atgaacaagacactcaatg 25767144  T
Q  115 a-tttcactcaccaa 128  Q
    | |||||||||||||    
T  25767145 attttcactcaccaa 25767159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 2390356 - 2390183
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  |||| | ||| |||  | |||||||||| ||| | |||||| |    
T  2390356 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttcgaatttcac-caatgaacaagacactta-tgattttc 2390259  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
     ||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  2390258 gctctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 2390183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 174
Target Start/End: Original strand, 8359405 - 8359562
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| | || |||||| || | |||| ||| ||||||||||| || |||||||||||||   | |||||||||| |||| |||    
T  8359405 caaaatgggttacaagaaattagtttaaacaagctcacaaagaaaaaccctaatttctacccattttcccaatctc-cccaatgaacaagacactc-atg 8359502  T
Q  115 a-tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaa 174  Q
    | |||||||| |  |||||||||  |||||||||| |||||| ||||||||| ||||||||    
T  8359503 attttcactctctcaaggtgttt-acaattgttttccaactcaagaatctaaacccccaaa 8359562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 30024826 - 30024941
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | | ||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  30024826 gggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttc 30024924  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  30024925 actcacccaaggtgttt 30024941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 43864318 - 43864203
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctt-tttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    |||||||| |||||| |||||||||||||| | ||||  || |||||||||||||   ||| |||||||||  | |||||||||| ||||||||| ||||    
T  43864318 gggttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttctacccacttttccaatctcac-caatgaacaagacactcaatgattttc 43864220  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  43864219 actcacccaaggtgttt 43864203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 47676230 - 47676345
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||| ||| | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||| ||| ||||    
T  47676230 gggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcattgattttc 47676328  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  47676329 actcacccaaggtgttt 47676345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 24525992 - 24526106
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttca 120  Q
    ||||||||||||| ||||  ||||| || | |||| |||||||||||||||| || |||||||||| |||  | |||||||||| ||||||||| |||||    
T  24525992 gttacaagaaattagctttgacaagctcacaaagaacaaaacctaatttctacccattttcccaatttca-ccaatgaacaagacactcaatgattttca 24526090  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| |||||||||    
T  24526091 ctcacccaaggtgttt 24526106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 33 - 135
Target Start/End: Complemental strand, 40808652 - 40808550
Alignment:
Q  33 aatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggt 132  Q
    |||| ||||||||||||||| ||||| |||  ||||||| |||   ||| || ||||| | ||||||||||||| | ||||||||||||| ||| |||||    
T  40808652 aattagcttcaacaagttcttcaagaaaaagtctaatttatactgattttccgatctcttcccatgaacaagaggcgcaatgatttcactaacccaaggt 40808553  T
Q  133 gtt 135  Q
    |||    
T  40808552 gtt 40808550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 26417390 - 26417294
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgattt 118  Q
    |||||||||||||||  |||||||||| || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||||||    
T  26417390 gggttacaagaaattatcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattt 26417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 41317531 - 41317643
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcact 122  Q
    |||||||||||| ||||  ||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||||||||||||| |||||||    
T  41317531 ttacaagaaattagctttgacaagctcacaaagaacaaccctaatttctaccaattttcccaatctcac-caatgaacaagagactcaatgattttcact 41317629  T
Q  123 caccaaaggtgttt 136  Q
    || | |||||||||    
T  41317630 catccaaggtgttt 41317643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 43363564 - 43363629
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcc 83  Q
    ||||| ||||||| ||||| | ||||||||| |||||||||  |||||||||||||||| ||||||    
T  43363564 aaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaatttctaccattttcc 43363629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 6360123 - 6360179
Alignment:
Q  140 aattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  6360123 aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 6360179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 18126718 - 18126603
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| ||||||||| | ||||  || |||||||||||| | |||| |||||||||  | |||||||| | ||||||||| ||||    
T  18126718 gggttacaagaaattagcttgaacaagttcacaaagaacaaccctaatttctacacatttttccaatctca-ccaatgaacaaaacactcaatgattttc 18126620  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| ||| |||||    
T  18126619 actcacccaagttgttt 18126603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 31733063 - 31733178
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||| |||| || | ||||  || |||||||||||||  ||||| || |||||  | |||||||||| ||||||||| ||||    
T  31733063 gggttacaagaaattagcttcaccaagctcacaaagaacaaccctaatttctacccattttctcagtctcac-caatgaacaagacactcaatgattttc 31733161  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  31733162 actcacccaaggtgttt 31733178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 3259067 - 3258908
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--tttca 120  Q
    ||||||| ||||| |||| |||||| || | ||||  || |||| ||||||||  ||||||||||||||  | |||||||||| ||||| |||  |||||    
T  3259067 gttacaataaattagcttaaacaagctcacaaagaacaaccctagtttctacccattttcccaatctcac-caatgaacaagacactca-tgaattttca 3258970  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    ||  || ||||||||| | ||||||||  ||||||||||||||||||||| || |||||||||    
T  3258969 ctttcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaatgagaaccaa 3258908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 48408882 - 48408769
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| ||||  |||||||  | ||||  ||   ||||||||||| |||||||||||||||  | |||||||||| ||||||||    
T  48408882 caaaaggggttacaagaaattagctttgacaagtttacaaagaacaacattaatttctaccctttttcccaatctcac-caatgaacaagacactcaatg 48408784  T
Q  115 a-tttcactcaccaa 128  Q
    | |||||||||||||    
T  48408783 attttcactcaccaa 48408769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 116 - 185
Target Start/End: Original strand, 4510736 - 4510804
Alignment:
Q  116 tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatc 185  Q
    |||||||| || ||||||||| | ||||||||  |||||||||||||||||||   ||||||||||||||    
T  4510736 tttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaacccataaaagagaaccaatc 4510804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 65 - 136
Target Start/End: Original strand, 36146545 - 36146617
Alignment:
Q  65 ctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcactcaccaaaggtgttt 136  Q
    ||||||||||||  ||||||||||||||  | |||||||||| ||||||||| ||||||||||| |||||||||    
T  36146545 ctaatttctacccattttcccaatctcac-caatgaacaagacactcaatgattttcactcacccaaggtgttt 36146617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 180
Target Start/End: Original strand, 4512578 - 4512641
Alignment:
Q  116 tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaac 180  Q
    |||||||| || ||||||||| | ||||||||  |||||||||||| |||||||| |||||||||    
T  4512578 tttcactctcccaaggtgtttac-aattgtttcccaactctagaatataacccccaaaagagaac 4512641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 4538634 - 4538749
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| || || |||   ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||||||| ||||    
T  4538634 gggttacaagaaattagcttaaaaaatttcataaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattttc 4538732  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  4538733 actcacccaaggtgttt 4538749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 12097953 - 12098068
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    |||||||||||||||  |||||||||| || | | ||  || ||||||||||| || |||||||||||| |  | |||||||||| ||||||||| ||||    
T  12097953 gggttacaagaaattaacttcaacaagctcacaatgaacaaccctaatttctacccattttcccaatct-aaccaatgaacaagacactcaatgattttc 12098051  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| ||| |||||    
T  12098052 actcacccaagatgttt 12098068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 36574606 - 36574724
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||||||||  || | ||| ||||| | ||||||||||| ||| ||||||||| | | || ||||||| |||| || |     
T  36574606 aaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaatttctacc-tttccccaatctc-tccaataaacaagacactcgataat 36574703  T
Q  116 tttcactcaccaaaggtgttt 136  Q
    ||||||||||| |||||||||    
T  36574704 tttcactcacctaaggtgttt 36574724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 2e-39; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 316840 - 316663
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||| |||||||||||| ||||||||||| |||||||||  |||||||||||||||||||||| ||||||  | || | |||||||||| ||||||||    
T  316840 aaaaggattacaagaaattagcttcaacaagctctccaagaacaaacctaatttctacctttttctcaatcttttcccctaaacaagagacccaatgatt 316741  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||||||||  | || ||||||||||||||| ||||| || |||||||||||| |||||||||||| || || ||||||    
T  316740 tcactcacccga-gtttttcccaattgttttccaactttaaaatctaacccccaaaagagaaccaacccttagcctttg 316663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 35616247 - 35616098
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||||||||||||||||  ||| ||| || |||||||||  |||||||||||||||   |||| ||||||| | || |||||||||||||||||||||    
T  35616247 aaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctactcatttctcaatctcttcccgtgaacaagagactcaatgatt 35616148  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacc 167  Q
    ||||||||| ||||||||||| ||||||||   |||||||||||||||||    
T  35616147 tcactcacccaaggtgtttcctaattgtttccaaactctagaatctaacc 35616098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 38747079 - 38746906
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||||  |||||||||| ||||| |||||| |    
T  38747079 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcatta-atgaacaagatactca-tgattttc 38746982  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  38746981 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 38746906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 38 - 183
Target Start/End: Complemental strand, 4160689 - 4160546
Alignment:
Q  38 gcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtttc 137  Q
    |||||||||||||||||||||  |||||||||||||||| |||||| |||||| |  ||||| ||| | | ||| |||||||||||| | || ||||||     
T  4160689 gcttcaacaagttctccaagaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt- 4160591  T
Q  138 ccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
     ||||||||| |||||||| ||||||||||||| ||||||||||||    
T  4160590 acaattgtttctcaactct-gaatctaacccccaaaagagaaccaa 4160546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 40147333 - 40147162
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgatttc-ac 121  Q
    ||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||||||| ||    
T  40147333 gttacaagaaattagcttcaacaagctcacgaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgatttccac 40147236  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    || || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  40147235 tctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 40147162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 33 - 147
Target Start/End: Original strand, 10700753 - 10700868
Alignment:
Q  33 aatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcactcaccaaagg 131  Q
    |||| ||||||||||| |||| ||||  ||||||||||||||||||||| |||||||  || ||||||||| | ||||||||| |||||| |||| ||||    
T  10700753 aattagcttcaacaagctctctaagaacaaacctaatttctaccttttttccaatctattttcatgaacaaaatactcaatgattttcacgcacccaagg 10700852  T
Q  132 tgtttcccaattgttt 147  Q
    ||||||| ||||||||    
T  10700853 tgtttcctaattgttt 10700868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 22 - 181
Target Start/End: Complemental strand, 213539 - 213381
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| |||| |||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  213539 gggttacaagaaattagctttaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 213442  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaacc 181  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||    
T  213441 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaacc 213381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 13239829 - 13239718
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| ||||||||||||| |||||||||||||| | |||| ||| ||||||||||||| ||||| |||||||||  | |||||||||| |||||||||     
T  13239829 aaaagagttacaagaaattagcttcaacaagttcacaaagaaaaaccctaatttctaccattttttccaatctca-ccaatgaacaagacactcaatgat 13239731  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  13239730 tttcactcaccaa 13239718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 42428524 - 42428639
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | |||| ||| | ||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  42428524 gggttacaagaaattagcttcaacaagttcacaaagaaaaaccataatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 42428622  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  42428623 actcacccaaggtgttt 42428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 25412838 - 25412728
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| ||||||||||||||  | |||||||||| ||||||||| |    
T  25412838 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttcccaatctca-ccaatgaacaagacactcaatgatt 25412740  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  25412739 ttcactcaccaa 25412728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 3325986 - 3325873
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcact 122  Q
    |||||||||||||| ||||||||||| ||| |||||  ||| |||||||||||||||||  |||| || | | | |||||||| || ||||| |||||||    
T  3325986 ggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacctttttttcaatttcttcctaagaacaagatacccaatggtttcact 3325887  T
Q  123 caccaaaggtgttt 136  Q
    |||| |||||||||    
T  3325886 cacccaaggtgttt 3325873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 144
Target Start/End: Original strand, 10054911 - 10055032
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcact 122  Q
    ||||| |||||||| ||||||||||  ||| |||||  |||| |||||||||||  |||| ||||||| ||| |||||||| |||||||||||||||||     
T  10054911 ggttataagaaattagcttcaacaaactcttcaagaacaaacataatttctacccatttctcaatctctttctatgaacaatagactcaatgatttcacc 10055010  T
Q  123 caccaaaggtgtttcccaattg 144  Q
    |||| ||  ||||| |||||||    
T  10055011 cacccaaaatgttttccaattg 10055032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 30182666 - 30182555
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| |||||||||||||||  | |||||||||| |||||||||     
T  30182666 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccatttttcccaatctca-ccaatgaacaagacactcaatgat 30182568  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  30182567 tttcactcaccaa 30182555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 39468643 - 39468758
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || |||||||||||||| |  |||||||||| ||||||||| ||||    
T  39468643 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctcact-aatgaacaagacactcaatgattttc 39468741  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||  |||||||||    
T  39468742 actcactcaaggtgttt 39468758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 196
Target Start/End: Complemental strand, 5058079 - 5057948
Alignment:
Q  64 cctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cactcaccaaaggtgtttcccaattgtttttcaactctagaat 161  Q
    |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |||||  | ||||||||| | ||||||||| ||||||||||||    
T  5058079 cctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttcactcttccaaggtgtttac-aattgttttccaactctagaat 5057983  T
Q  162 ctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||||||||| |||||||||||| || || ||||||    
T  5057982 ctaacccccaaaagagaaccaacccttagcctttg 5057948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 30683014 - 30683122
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| |||||||||||||| | |||   || ||||||||||| |||||||||||||||||    |||||||||| |||||||||     
T  30683014 aaaagggttacaagaaattagcttcaacaagttcacaaag---aaccctaatttctaccctttttcccaatctca-caaatgaacaagacactcaatgat 30683109  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  30683110 tttcactcaccaa 30683122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 533843 - 533728
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||| ||||| ||||||||||| || | ||||| || ||||||||||| || ||||||||||||||  | |||||||||| || |||||| ||||    
T  533843 gggttacaaaaaattagcttcaacaagctcacaaagaccaaccctaatttctacccattttcccaatctca-ccaatgaacaagacacgcaatgattttc 533745  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  533744 actcacccaaggtgttt 533728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 13488277 - 13488162
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || |||||||||||| |  | |||||||||| ||||||| | ||||    
T  13488277 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctta-ccaatgaacaagacactcaataattttc 13488179  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  13488178 actcacccaaggtgttt 13488162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 28278390 - 28278230
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || | |||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  28278390 gggttacaagaaattagcttcaacaagctcacaaagaacaaccataatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 28278293  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || || |||||| | ||||||||  ||||||||||||||||||||  ||||||| ||||    
T  28278292 actctcccaatgtgtttac-aattgtttcccaactctagaatctaacccctaaaagagagccaa 28278230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 13343139 - 13343027
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||||| |||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  13343139 aaaaggattacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaacaagacactcaatga 13343041  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  13343040 ttttcactcaccaa 13343027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 30793162 - 30793081
Alignment:
Q  61 aaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtttcccaat 142  Q
    ||||||||||| ||||  |||||||||||| | |||||||||| ||| | ||||||||||||||||| || |||||| ||||    
T  30793162 aaacctaatttatacccatttcccaatctcttcccatgaacaaaagaataaatgatttcactcaccatagttgtttcacaat 30793081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 538099 - 537984
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || | ||||||||| || |||||||||||||| |  |||||||||| || |||||| ||||    
T  538099 gggttacaagaaattagcttcaacaagctcacaaagagcaaccttaatttctacccattttcccaatctcact-aatgaacaagacacgcaatgattttc 538001  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  538000 actcacccaaggtgttt 537984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 13695781 - 13695900
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| |||| |||||| || | ||| ||||| |||||||| |||| ||||||||||||| | | | ||| |||| |||||||||     
T  13695781 aaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgtacccttttcccaatctc-tccaaagaaaaagatactcaatgat 13695879  T
Q  116 tttcactcaccaaaggtgttt 136  Q
    ||||||||||  |||||||||    
T  13695880 tttcactcacacaaggtgttt 13695900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 29 - 136
Target Start/End: Complemental strand, 19806449 - 19806343
Alignment:
Q  29 aagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgatttcactcacca 127  Q
    |||||||| ||||||||||  || | |||| | |||||||||||||||  |||| |||||||||  | |||||||||| ||||||||||||||||||||     
T  19806449 aagaaattagcttcaacaaactcacaaaga-acaacctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgatttcactcaccc 19806352  T
Q  128 aaggtgttt 136  Q
    |||||||||    
T  19806351 aaggtgttt 19806343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 196
Target Start/End: Complemental strand, 27015589 - 27015433
Alignment:
Q  38 gcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cactcaccaaaggtgtt 135  Q
    |||||||||||||| | ||||  || |||||||||||||| ||||||||||||||  | |||| ||| | ||||| |||||| ||||| || ||| ||||    
T  27015589 gcttcaacaagttcacaaagaacaaccctaatttctacctattttcccaatctcac-caatgaccaa-acactca-tgattttcactctcccaagatgtt 27015493  T
Q  136 tcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    | | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  27015492 tac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 27015433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 36074132 - 36074246
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc----tttttcccaatctcattccatgaacaagagactcaat 113  Q
    ||||| ||||||||||||| ||||  |||||||| | ||||  || |||||||||||||    |||||||||||||||  | |||||||||| |||||||    
T  36074132 aaaagagttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctacccttttttttcccaatctca-ccaatgaacaagacactcaat 36074230  T
Q  114 ga-tttcactcaccaa 128  Q
    || |||||||||||||    
T  36074231 gattttcactcaccaa 36074246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 117
Target Start/End: Complemental strand, 16452154 - 16452059
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    ||||||||||||||| ||||||||||| ||   ||||  |||| ||||||||| || |||| ||||||||| || |||||||||| |||||||||||    
T  16452154 gggttacaagaaattagcttcaacaagctcagaaagaacaaacttaatttctacccatttttccaatctca-tcaatgaacaagacactcaatgatt 16452059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 186
Target Start/End: Original strand, 21205842 - 21205910
Alignment:
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatcc 186  Q
    ||||||||  |||||||||||||||| | || |||||| | |||||||||| | |||||||||||||||    
T  21205842 tcactcactcaaggtgtttcccaattatattccaactccataatctaaccctcaaaagagaaccaatcc 21205910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 28750749 - 28750864
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    |||||||| ||||||  ||||||||| |||   ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||||||| ||||    
T  28750749 gggttacaggaaattaacttcaacaatttcataaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactcaatgattttc 28750847  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  28750848 actcacccaaggtgttt 28750864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 32636898 - 32636783
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || | ||||||||| || ||||||||||||||  | ||||| |||| ||||||||| ||||    
T  32636898 gggttacaagaaattagctttgacaagttcacaaagaacaaccataatttctacccattttcccaatctca-ccaatgaataagacactcaatgattttc 32636800  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  32636799 actcacccaaggtgttt 32636783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 42426329 - 42426444
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||| ||||||||| |||||||||| ||| | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||| | ||||    
T  42426329 gggttgcaagaaattagcttcaacaatttcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaataattttc 42426427  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  42426428 actcacccaaggtgttt 42426444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 9049432 - 9049505
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctca 91  Q
    |||| |||||||||||||| ||||||||||| || | || |||||  |||||||||| | ||||||||| ||||    
T  9049432 aaaatggttacaagaaattagcttcaacaagctcacaaaaacaaacactaatttctatcattttcccaaactca 9049505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 131 - 196
Target Start/End: Original strand, 14689614 - 14689678
Alignment:
Q  131 gtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||||||||||||||||  |||||||||||||| | |||| |||||||||||| || || ||||||    
T  14689614 gtgtttcccaattgtttcacaactctagaatct-atccccaaaagagaaccaacccctagcctttg 14689678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 22097940 - 22097879
Alignment:
Q  20 aagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctaccttttt 81  Q
    |||||||| ||||||||  ||||||||| ||||||||||  || ||||||||||||| ||||    
T  22097940 aagggttataagaaattaacttcaacaaattctccaagaacaaccctaatttctaccctttt 22097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 112
Target Start/End: Complemental strand, 6017086 - 6016992
Alignment:
Q  17 aaaaagggttacaagaaatttg-cttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaa 112  Q
    ||||| |||||||||||||| | |||||||| |||||| |||| | |||||||||||||||  ||||| ||| ||||   |||||||||||||||||    
T  6017086 aaaaaaggttacaagaaattagtcttcaacaggttctcaaaga-agaacctaatttctaccaatttcc-aatttcatctaatgaacaagagactcaa 6016992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 16641108 - 16641195
Alignment:
Q  96 atgaacaagagactcaatga-tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||||||||| ||| ||||| ||||||||||  ||||||||| | ||| |||   |||||||||||||||| |||| ||||||||||||    
T  16641108 atgaacaagacacttaatgaatttcactcactcaaggtgtttacaaat-gttccccaactctagaatctaatccccaaaagagaaccaa 16641195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 180
Target Start/End: Original strand, 27637701 - 27637865
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| | || |||||| ||   ||||  || |||||||||||||  ||||| ||||||||  | |||||||||| ||||| ||    
T  27637701 caaaatgggttacaagaaattagtttaaacaagctcataaagaacaaccctaatttctacccattttctcaatctcac-caatgaacaagacactca-tg 27637798  T
Q  115 a--tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaac 180  Q
    |  ||||||||  | |||||||| | |||||||||  ||||||||| ||||||||||| |||||||||    
T  27637799 aattttcactcttccaaggtgtt-cacaattgtttcccaactctagcatctaacccccaaaagagaac 27637865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 25073646 - 25073485
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    ||||||||||||| ||| | |||| |||||| || | ||||  ||| |||||||||||| ||||  ||||||| | |||||||||||| |||||||||||    
T  25073646 aaaagggttacaataaaatagctttaacaagctcacgaagaataaatctaatttctaccattttttcaatctcctcccatgaacaagatactcaatgatt 25073547  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaa 179  Q
    ||||||||| ||| ||||||||||||||||  ||||||||||||||||||||| ||||||||    
T  25073546 tcactcacccaagatgtttcccaattgtttcccaactctagaatctaacccccaaaagagaa 25073485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 21593738 - 21593578
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  21593738 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 21593641  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  21593640 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaa 21593578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 26830220 - 26830391
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cact 122  Q
    |||||||||||| ||||||||||| || | ||||  ||  ||||||||||||  |||| |||||||||  | |||||||||| ||||| |||||| ||||    
T  26830220 ttacaagaaattagcttcaacaagctcacaaagaacaactctaatttctacccatttttccaatctcacccaatgaacaagacactca-tgattttcact 26830318  T
Q  123 caccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    | || ||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||| || || ||||||    
T  26830319 ctcccaaggtgtttac-aattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 26830391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5413484 - 5413594
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||||||||||||||||||  | |||||||||| ||||||||| |    
T  5413484 aaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccctaatttctacctttttcccaatctca-ccaatgaacaagacactcaatgatt 5413582  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  5413583 ttcactcaccaa 5413594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 5740970 - 5741036
Alignment:
Q  108 ctcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaa 174  Q
    ||||||||||||||||||| ||||||||| ||||||||||| ||||| |||||||||||||||||||    
T  5740970 ctcaatgatttcactcaccgaaggtgttttccaattgttttccaactttagaatctaaccccccaaa 5741036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5406290 - 5406400
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| ||||||||||||||  | |||||||||| ||||||||| |    
T  5406290 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctca-ccaatgaacaagacactcaatgatt 5406388  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  5406389 ttcactcaccaa 5406400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5410615 - 5410725
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| ||||||||||||||  | |||||||||| ||||||||| |    
T  5410615 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctca-ccaatgaacaagacactcaatgatt 5410713  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  5410714 ttcactcaccaa 5410725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 31404765 - 31404875
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| |||||||||||||| |  |||||||||| ||||||||| |    
T  31404765 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctcact-gatgaacaagacactcaatgatt 31404863  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  31404864 ttcactcaccaa 31404875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 5043699 - 5043541
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| ||||||||||| || | ||||  ||||||||||||||| | ||||| ||||||||    |||||||||| ||||| |||||| |||    
T  5043699 gttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctactcattttctcaatctcacga-atgaacaagacactca-tgattttcac 5043602  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    || |  ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  5043601 tctcacaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaa 5043541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 2973033 - 2973206
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | ||||  |||||||||||||| || ||||||||||||||  | ||||||| || |||  |||| ||||    
T  2973033 gggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-ccaatgaacacgacact-tatgattttc 2973130  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || |||||||||  |||||||||  |||||||||||||||| |||  |||||||||||| || || ||||||    
T  2973131 actctcccaaggtgttt-acaattgtttcccaactctagaatctaatccctaaaagagaaccaacccttagcctttg 2973206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 2171622 - 2171732
Alignment:
Q  19 aaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    |||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| |||||||||||||||  | |||||||||| ||||||||| |    
T  2171622 aaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccatttttcccaatctca-ccaatgaacaagacactcaatgatt 2171720  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  2171721 ttcactcaccaa 2171732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 3808797 - 3808975
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| | ||||||||| || | ||||  || |||||||||||||| ||||||||||||||  | |||||||||| |||   ||    
T  3808797 caaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttctacctattttcccaatctca-ccaatgaacaagacact-tgtg 3808894  T
Q  115 a-tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    | |||||||| || |||||||||  |||||||||  |||||||||||||||| |||||||| |||||||| || || ||||||    
T  3808895 attttcactctcccaaggtgttt-acaattgtttcccaactctagaatctaa-cccccaaaaagaaccaacccttagcctttg 3808975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 16452420 - 16452531
Alignment:
Q  19 aaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    |||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||     
T  16452420 aaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaacaagacactcaatgat 16452518  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  16452519 tttcactcaccaa 16452531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 9183125 - 9183240
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||| ||| | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  9183125 gggttacaagaaattagcttcaacaaattcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttc 9183223  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  9183224 actcacccaaggtgttt 9183240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 17763062 - 17762890
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--tttca 120  Q
    ||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||| ||||||||  | |||||||||| ||||| |||  |||||    
T  17763062 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttctcaatctcac-caatgaacaagacactca-tgaattttca 17762965  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||| |  || |||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  17762964 ctctctcaaagtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 17762890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 30834626 - 30834736
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  30834626 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaacaagacactcaatga 30834724  T
Q  116 -tttcactcacc 126  Q
     |||||||||||    
T  30834725 ttttcactcacc 30834736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 4045494 - 4045382
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcact 122  Q
    |||||||||||| ||||||||||| ||   |||| |||| ||||||||||||| ||||||||||||| | | || ||||||| ||||||||| |||||||    
T  4045494 ttacaagaaattagcttcaacaagctcataaagaacaaaccctaatttctaccattttcccaatctc-tccaataaacaagacactcaatgattttcact 4045396  T
Q  123 caccaaaggtgttt 136  Q
    ||||  ||||||||    
T  4045395 caccctaggtgttt 4045382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 28137502 - 28137617
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| |||||| || | ||||  || ||||||||||| || |||||||| |||||  | |||||||||| ||||||||| ||||    
T  28137502 gggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttcccattctca-ccaatgaacaagacactcaatgattttc 28137600  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  28137601 actcacccaaggtgttt 28137617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 603290 - 603334
Alignment:
Q  139 caattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||    
T  603290 caattgtttcccaactctagaatctaacccccaaaagagaaccaa 603334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 17758097 - 17758027
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctca 91  Q
    ||||||||||||||| ||||||||||| || | ||||  || ||||||||||| || ||||||||||||||    
T  17758097 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca 17758027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 21589005 - 21588935
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctca 91  Q
    ||||||||||||||| ||||||||||| || | ||||  || ||||||||||| || ||||||||||||||    
T  21589005 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca 21588935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 3038997 - 3039112
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||| ||| || | | ||  || |||||||||||||  ||||||||||||||  | |||||||||| | ||||||| ||||    
T  3038997 gggttacaagaaattagcttcaaaaagctcacaatgaacaaccctaatttctaccaattttcccaatctca-ccaatgaacaagacattcaatgattttc 3039095  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||  |||||||||    
T  3039096 actcactcaaggtgttt 3039112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 33160442 - 33160555
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||| ||||||||||||| ||||  |||||||| | ||||  ||  ||||||||||||  |||||||||||||||  | ||||| |||| |||||||||    
T  33160442 aaaagagttacaagaaattagctttgacaagttcacaaagaacaactctaatttctacctttttttcccaatctca-ccaatgaataagacactcaatga 33160540  T
Q  116 --tttcactcaccaa 128  Q
      |||||||||||||    
T  33160541 tttttcactcaccaa 33160555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 195
Target Start/End: Complemental strand, 41135898 - 41135721
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||| ||||||||||||  |||||| ||||||| |||||  ||| |||||||||||| |||| | | |||| |  || ||||||||||||||||||||    
T  41135898 aaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatctaatttctaccctttttctattctcctcacaggaacaagagactcaatgatt 41135799  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatccttt 195  Q
    || |||||| |||||||||  ||| ||||| |||||||||||||||||||||| ||||||||||||||| || |||||    
T  41135798 tccctcacccaaggtgtttttcaaatgtttctcaactctagaatctaacccccaaaagagaaccaatccttagccttt 41135721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 196
Target Start/End: Original strand, 37879006 - 37879178
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-ca 120  Q
    |||||||||||||| ||||||||||| || | ||||  || |||||||||||||| ||||||||||||||  | |||||||||| ||||| |||||| ||    
T  37879006 ggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacctattttcccaatctcac-caatgaacaagacactca-tgattttca 37879103  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||| || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||||| || ||||||    
T  37879104 ctctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaatccttagcctttg 37879178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 18 - 180
Target Start/End: Complemental strand, 22079394 - 22079237
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||| |||||||||||||| |||| |||||| || | ||||  |||| ||||||||||| |||| |||||||| | ||||||||||||     |||| ||    
T  22079394 aaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttctaccatttttccaatctcttcccatgaacaaga-----aatggtt 22079300  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaac 180  Q
    |||||||||  | || |||||||||||||| |||||||||||||||||||||| |||||||||    
T  22079299 tcactcacctgaagtttttcccaattgtttctcaactctagaatctaacccccaaaagagaac 22079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 11348772 - 11348599
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  11348772 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctaccaattttcccaatctcac-caatgaacaagacactca-tgattttc 11348675  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  11348674 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 11348599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 12318613 - 12318721
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||| |||||||||||||| ||||||||||| |||||| ||  ||||||||||||||||  ||||| ||||||   |||||||||||| |||||||||||    
T  12318613 aaaatggttacaagaaattagcttcaacaagctctccatgaacaaacctaatttctacccatttccaaatctctacccatgaacaagaaactcaatgatt 12318712  T
Q  118 tcactcacc 126  Q
    |||||||||    
T  12318713 tcactcacc 12318721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 16 - 196
Target Start/End: Original strand, 37033161 - 37033340
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| || |||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||    
T  37033161 caaaatggattacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tg 37033258  T
Q  115 attt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| ||||| || ||||||||| | ||||||||  ||||||||||||||||||||  |||||||||||| ||||| ||||||    
T  37033259 attttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaaccccaaaaagagaaccaacccatagcctttg 37033340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 9109510 - 9109611
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||||||||||||||||  |||||||||||||||||||  ||||| |||||||| || ||||| ||||||| | |||||||||||| |||||| ||||    
T  9109510 aaaagggttacaagaaattaacttcaacaagttctccaagtaaaaacttaatttcttccattttctcaatctcctaccatgaacaagacactcaaggatt 9109609  T
Q  118 tc 119  Q
    ||    
T  9109610 tc 9109611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 47115251 - 47115072
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| |||| |||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||    
T  47115251 caaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctaccaattttcccaatctcac-caatgaacaagacactca-tg 47115154  T
Q  115 attt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| ||||| || ||| ||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  47115153 attttcactctcccaagatgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 47115072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 13547183 - 13547356
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||| | ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  13547183 gggttacaagaaaatagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 13547280  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||| ||||||||||||||||| |||||||||||| || || ||||||    
T  13547281 actctcccaaggtgtttac-aattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttg 13547356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 29136321 - 29136164
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||| ||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  29136321 gggttccaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 29136224  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaac 180  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||    
T  29136223 actctcccaaggtgtttac-aattgtttcacaactctagaatctaacccccaaaagagaac 29136164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 19754568 - 19754395
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    |||||||||||||| ||||||||||| || | ||||  || |||||||||||||  |||||| ||||||||  | |||||||||| ||||| |||||| |    
T  19754568 ggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttctcaatctcac-caatgaacaagacactca-tgattttc 19754471  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| |  ||||||||| | ||| ||||  ||||||||||||||||||||| |||||||||||| |  |||||||||    
T  19754470 actctctcaaggtgtttacgaat-gtttcccaactctagaatctaacccccaaaagagaaccaaccattatcctttg 19754395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 179
Target Start/End: Complemental strand, 37168377 - 37168215
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| |||| |||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||    
T  37168377 caaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tg 37168280  T
Q  115 attt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaa 179  Q
    |||| ||||| |  ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||    
T  37168279 attttcactctctcaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaa 37168215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 183
Target Start/End: Original strand, 42298071 - 42298229
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgatttc-ac 121  Q
    ||||||||||||| ||||||||||| || | || |  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||||||  ||    
T  42298071 gttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctaccaattttcccaatctcac-caatgaacaagacactca-tgatttttac 42298168  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    || || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  42298169 tctcccaaggtgtttac-aattgtttcacaactctagaatctaacccccaaaagagaaccaa 42298229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 2263065 - 2263174
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaa----cctaatttctacctttttcccaatctcattccatgaacaagagactcaat 113  Q
    |||||||||||||||||||  |||||||||| || |||||| ||||    | || |||||||||||||||||||||| ||| | || ||| |||||||||    
T  2263065 aaaagggttacaagaaattatcttcaacaagctcaccaagaaaaaaaaaacttactttctacctttttcccaatctctttcaaagagcaaaagactcaat 2263164  T
Q  114 gatttcactc 123  Q
    ||||||||||    
T  2263165 gatttcactc 2263174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 49918424 - 49918309
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  49918424 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttc 49918326  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  49918325 actcacccaaggtgttt 49918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 37503649 - 37503763
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttca 120  Q
    |||||||||||||| |||||||||||||| | ||||  || |||||||| || || ||||||||||||||  | |||||||||| ||||||||| |||||    
T  37503649 ggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttttacccattttcccaatctca-ccaatgaacaagacactcaatgattttca 37503747  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| |||||||||    
T  37503748 ctcacccaaggtgttt 37503763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 4535577 - 4535693
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactc 123  Q
    |||||||||||||  |||||| ||| |||||||||  |||| |||||||||||  || | ||||||| | |  |||||||||| ||||||||||||||||    
T  4535577 gttacaagaaattgacttcaataagctctccaagaacaaacttaatttctaccaattccgcaatctcttactttgaacaagag-ctcaatgatttcactc 4535675  T
Q  124 accaaaggtgtttcccaa 141  Q
    ||| || |||||||||||    
T  4535676 acccaatgtgtttcccaa 4535693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 167
Target Start/End: Complemental strand, 6808530 - 6808375
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaat------ttctacctttttcccaatctcattccatgaacaagagactca 111  Q
    ||||| |||||||||| || ||||||||||| |||||||||  |||||||||      ||||||| ||| || ||||||    ||||||||||| |||||    
T  6808530 aaaagagttacaagaagttagcttcaacaagctctccaagaacaaacctaatcctaatttctaccatttccctaatctctactcatgaacaagacactca 6808431  T
Q  112 atgattt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacc 167  Q
    || |||| ||||| || || |||||||||||| |||| |||||||||||||||||||    
T  6808430 ataattttcactctcccaaagtgtttcccaat-gtttctcaactctagaatctaacc 6808375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 124
Target Start/End: Original strand, 1050540 - 1050640
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactc 123  Q
    ||||||||||||| ||||||| ||| |||| ||||  | |||||||||  |||  |||||||||||| |  ||||||||||||||||||| |||||||||    
T  1050540 gttacaagaaattagcttcaataagctctcgaagaacacacctaattttcacccatttcccaatctcttcacatgaacaagagactcaataatttcactc 1050639  T
Q  124 a 124  Q
    |    
T  1050640 a 1050640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 13549094 - 13549267
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    |||||||| |||||| | || |||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  13549094 gggttacatgaaattaggtttaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 13549191  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||| ||||||||||||||||| |||||||||||| || || ||||||    
T  13549192 actctcccaaggtgtttac-aattgtttcccaaatctagaatctaacccccaaaagagaaccaacccttagcctttg 13549267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 28220320 - 28220435
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || |||||| |||||||  | ||||| |||| ||||||||| ||||    
T  28220320 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttccgaatctca-ccaatgaataagacactcaatgattttc 28220418  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  28220419 actcacccaaggtgttt 28220435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 28242368 - 28242289
Alignment:
Q  116 tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||||||| || ||||||||| | ||||||||| ||||||||||||||||||||  |||||||||||| ||||| ||||||    
T  28242368 tttcactctcccaaggtgtttac-aattgttttccaactctagaatctaacccctaaaagagaaccaacccatagcctttg 28242289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 28265648 - 28265763
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | | ||  || |||||||||||||| |||||||||||||   | |||||||||| ||||||||| ||||    
T  28265648 gggttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacctattttcccaatctc-gccaatgaacaagacactcaatgattttc 28265746  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  28265747 actcacccaaggtgttt 28265763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 127
Target Start/End: Complemental strand, 3156939 - 3156833
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  3156939 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttc 3156841  T
Q  120 actcacca 127  Q
    ||||||||    
T  3156840 actcacca 3156833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 41360988 - 41360874
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgatttca 120  Q
    ||||||||||||||| | ||||||||| || | ||||  |||||||||||||| || ||||||||||||||  | |||||||||| |||||||  |||||    
T  41360988 gggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatattttca 41360890  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| ||| |||||    
T  41360889 ctcacccaagatgttt 41360874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 47255434 - 47255594
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||| |||||| |    
T  47255434 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactca-tgattttc 47255531  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || ||||  ||| | |||| |||  ||||||||||||||||||||| ||||||||||||    
T  47255532 actctcccaaggcatttac-aattatttcccaactctagaatctaacccccaaaagagaaccaa 47255594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 193683 - 193512
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| ||||||||||| |    ||||  || |||||||||||||  ||||| ||||||||  | |||||||||| ||||| |||||| |||    
T  193683 gttacaagaaattagcttcaacaagctaataaagaacaaccctaatttctacccattttctcaatctcac-caatgaacaagacactca-tgattttcac 193586  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
     | || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  193585 cctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 193512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 19752759 - 19752597
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    |||||||||||||| ||||||||||| || | ||||  || |||||||||||||  |||| | ||||||||  | |||||||||| ||||| |||||| |    
T  19752759 ggttacaagaaattagcttcaacaagctcgcaaagaacaaccctaatttctacccattttactcaatctcac-caatgaacaagacactca-tgattttc 19752662  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatc 185  Q
    |||| |  ||||||||| | | || |||  ||||||||||||||||||||| ||||||||||||||    
T  19752661 actctctcaaggtgtttacga-ttatttcccaactctagaatctaacccccaaaagagaaccaatc 19752597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 20762750 - 20762638
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||| ||||||||  | |||||||||| |||||||||    
T  20762750 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttctcaatctca-ccaatgaacaagatactcaatga 20762652  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  20762651 ttttcactcaccaa 20762638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Original strand, 28223515 - 28223628
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||||||   ||||  || | ||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  28223515 gggttacaagaaattagcttcaacaagttcagaaagatcaaccataatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 28223613  T
Q  120 actcaccaaaggtgt 134  Q
    ||||||| |||||||    
T  28223614 actcacccaaggtgt 28223628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 44455232 - 44455119
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaat-gatttcac 121  Q
    ||||||||||||| | |||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||| | ||||||    
T  44455232 gttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatggttttcac 44455134  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  44455133 tcacccaaggtgttt 44455119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 27 - 158
Target Start/End: Original strand, 49893693 - 49893825
Alignment:
Q  27 acaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattc-catgaacaagagactcaatgatttcactca 124  Q
    |||||||||| |||| |||||||||  |||||  ||   ||||||||||| ||||||| |||||| ||| ||||| ||||| |||||| |||||||||      
T  49893693 acaagaaattagctttaacaagttcatcaagagcaattataatttctaccatttttccgaatctctttcgcatgatcaagaaactcaacgatttcactat 49893792  T
Q  125 ccaaaggtgtttcccaattgtttttcaactctag 158  Q
    |||| ||||||||||||||||||| |||| ||||    
T  49893793 ccaa-ggtgtttcccaattgttttccaacactag 49893825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 4552731 - 4552846
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | |||   |||||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  4552731 gggttacaagaaattagcttcaacaagctcacaaaggacaaacctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttc 4552829  T
Q  120 actcaccaaaggtgttt 136  Q
     |||||| |||||||||    
T  4552830 cctcacccaaggtgttt 4552846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 31659312 - 31659197
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | ||||  |  ||||||||||| || |||| |||||||||  | |||||||||| ||||||||| ||||    
T  31659312 gggttacaagaaattagcttcaacaagctcacaaagaacagccctaatttctacccatttttccaatctca-ccaatgaacaagacactcaatgattttc 31659214  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  31659213 actcacccaaggtgttt 31659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 7482319 - 7482486
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctaccttttt-cccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| |||| |||||| || | ||||  || |||||||||||||  ||| ||||||||||  | |||||||| | ||||| ||    
T  7482319 caaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccatttacccaatctcac-caatgaacaatacactca-tg 7482416  T
Q  115 a--tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |  |||||||  || ||||||||| | ||||| ||  ||||||||||||||||||||| ||||||||||||    
T  7482417 aattttcactttcccaaggtgtttac-aattgcttcccaactctagaatctaacccccaaaagagaaccaa 7482486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 13938216 - 13938126
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagaga 107  Q
    |||||| ||||||||||||||   ||  ||||||||||||||| | |||||||||||||||  |||||||||||| | ||| ||||||||||    
T  13938216 caaaaaaggttacaagaaattatattttacaagttctccaaga-acaacctaatttctacccatttcccaatctcttcccacgaacaagaga 13938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 101 - 168
Target Start/End: Original strand, 16216671 - 16216737
Alignment:
Q  101 caagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccc 168  Q
    |||||||||||||||||| ||| ||| ||||| ||||  |||||||| ||||||||||||||||||||    
T  16216671 caagagactcaatgattttact-acctaaggtatttcataattgtttctcaactctagaatctaaccc 16216737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 109
Target Start/End: Complemental strand, 30670162 - 30670080
Alignment:
Q  26 tacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagact 109  Q
    ||||| ||||| |||||||||| |||||||| | | |||||||||||||| | ||||  |||||| ||||||||||||||||||    
T  30670162 tacaaaaaattagcttcaacaaattctccaaaa-acaacctaatttctacatatttcgaaatctccttccatgaacaagagact 30670080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 167
Target Start/End: Complemental strand, 33775980 - 33775839
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgatttcactc 123  Q
    |||||| ||||| ||||||| |||||||||||||  || ||||||||||| | ||||||  ||| || |||| ||| ||||||||||||||||||| ||     
T  33775980 ttacaaaaaattagcttcaagaagttctccaagagcaatcctaatttctatcatttttctgaatatc-ttccgtgaccaagagactcaatgatttctct- 33775883  T
Q  124 accaaaggtgtttcccaattgtttttcaactctagaatctaacc 167  Q
    | ||||  ||||| | ||||||||  ||| ||||||||||||||    
T  33775882 atcaaatatgtttacaaattgtttcccaattctagaatctaacc 33775839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 196
Target Start/End: Complemental strand, 34603655 - 34603476
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||| ||||||||||||||| |||| |||||| || | ||||  || |||||||||||||  ||||  ||||||||  | |||||||||| ||||| |||    
T  34603655 aaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctacccattttttcaatctcac-caatgaacaagacactca-tga 34603558  T
Q  116 --tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
      |||||||  || ||||||||| | ||||||||  |||||||||||||||||| || |||||||||||| || || ||||||    
T  34603557 attttcactttcccaaggtgtttac-aattgtttcccaactctagaatctaacctccaaaagagaaccaacccttagcctttg 34603476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 8550883 - 8550996
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| |||| |||||| || | ||||  |||||||||||||| || ||||||||||||||    |||||||||| ||||||||| ||||||    
T  8550883 gttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttcac 8550981  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| || ||||||    
T  8550982 tcacccaatgtgttt 8550996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 13316442 - 13316516
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctca 91  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| |||||||||||||||||    
T  13316442 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttcccaatctca 13316516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 16914265 - 16914355
Alignment:
Q  18 aaaagggttacaagaaattt-gcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagaga 107  Q
    |||||||||| |||||| || ||||||||| | |||||||||  |||| |||||| ||||  |||||||||||| | ||||||||||||||    
T  16914265 aaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataatttttacccatttcccaatctcttcccatgaacaagaga 16914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 93
Target Start/End: Complemental strand, 36683762 - 36683692
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcatt 93  Q
    ||||||||||||| ||||||||||  || | ||||  ||||||||||||||||| ||||||||||||||||    
T  36683762 gttacaagaaattagcttcaacaaactcacaaagaataaacctaatttctacctattttcccaatctcatt 36683692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 928066 - 928186
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||||||||| || | ||| ||||| ||||||||||| | ||||| ||||| |||  | | |||||||| ||||| |||    
T  928066 aaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttctatcattttttccaatatca-ccaaagaacaagacactcattga 928164  T
Q  116 -tttcactcaccaaaggtgttt 136  Q
     ||||||||||| |||||||||    
T  928165 ttttcactcacccaaggtgttt 928186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 3189408 - 3189297
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| |||||| |||||| |||||||||||||| | ||||  || |||||||| || ||||||||| |||||||  | |||||||||| ||||| |||     
T  3189408 aaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctca-ccaatgaacaagacactcagtgat 3189310  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  3189309 tttcactcaccaa 3189297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 3198225 - 3198114
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| |||||| |||||| |||||||||||||| | ||||  || |||||||| || ||||||||| |||||||  | |||||||||| ||||| |||     
T  3198225 aaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctca-ccaatgaacaagacactcagtgat 3198127  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  3198126 tttcactcaccaa 3198114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 3207064 - 3206953
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| |||||| |||||| |||||||||||||| | ||||  || |||||||| || ||||||||| |||||||  | |||||||||| ||||| |||     
T  3207064 aaaagagttacaggaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctca-ccaatgaacaagacactcagtgat 3206966  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  3206965 tttcactcaccaa 3206953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 132
Target Start/End: Complemental strand, 16455695 - 16455585
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttct-acctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| ||  | ||| |||| ||||||||| ||| |||| |||||||||  | |||||||||| ||||||||| ||||    
T  16455695 gggttacaagaaattagcttcaacaagctc-actagaaaaaatctaatttctcaccattttaccaatctca-ccaatgaacaagacactcaatgattttc 16455598  T
Q  120 actcaccaaaggt 132  Q
    ||||||| |||||    
T  16455597 actcacccaaggt 16455585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 28317803 - 28317849
Alignment:
Q  112 atgatttcactcaccaaaggtgtttcccaattgtttttcaactctaga 159  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  28317803 atgatttcact-acccaaggtgtttcccaattgtttttcaaatctaga 28317849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 136
Target Start/End: Complemental strand, 1833554 - 1833481
Alignment:
Q  64 cctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcactcaccaaaggtgttt 136  Q
    |||||||||||||  ||||||||||||||  | |||||||||| ||||||||| ||||||||||| |||||||||    
T  1833554 cctaatttctacccattttcccaatctcac-caatgaacaagacactcaatgattttcactcacccaaggtgttt 1833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 111
Target Start/End: Complemental strand, 6398700 - 6398631
Alignment:
Q  41 tcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactca 111  Q
    |||| ||||||||||||| | ||||||||||||||   |||||||||||| | |||||||||||| |||||    
T  6398700 tcaataagttctccaaga-acaacctaatttctactcatttcccaatctcttcccatgaacaagaaactca 6398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 41053297 - 41053224
Alignment:
Q  95 catgaacaagagactcaa-tgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccc 168  Q
    ||||| |||||||||||| |||||||||| ||| |||||||| |||| |||| |  |||||||||||||||||||    
T  41053297 catgatcaagagactcaaatgatttcact-acccaaggtgttccccagttgtatcccaactctagaatctaaccc 41053224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 1485861 - 1485918
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac 75  Q
    |||||||||||||||||||   |||||||||  |||||||| ||| ||||||||||||    
T  1485861 aaaagggttacaagaaattatattcaacaagcactccaagaaaaatcctaatttctac 1485918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 183
Target Start/End: Original strand, 31925927 - 31925960
Alignment:
Q  150 caactctagaatctaaccccccaaagagaaccaa 183  Q
    ||||||||||||||||||||| ||||||||||||    
T  31925927 caactctagaatctaacccccaaaagagaaccaa 31925960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 37559962 - 37560078
Alignment:
Q  22 gggttacaagaaatttgctt-caacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-ttt 118  Q
    ||||||||||||||| |||| |||||||||| | ||||  ||  ||||||||||||  |||||| |||||||  | |||||||||| ||||||||| |||    
T  37559962 gggttacaagaaattagctttcaacaagttcacaaagaacaactctaatttctacccattttcctaatctcac-caatgaacaagacactcaatgatttt 37560060  T
Q  119 cactcaccaaaggtgttt 136  Q
    |||||||| || ||||||    
T  37560061 cactcacctaatgtgttt 37560078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 50167269 - 50167384
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||  ||||| || | || |  || ||||||||||||   ||||||||||||||  | |||||||||| ||||||||| ||||    
T  50167269 gggttacaagaaattagctttgacaagctcacaaataacaaccctaatttctactaattttcccaatctcac-caatgaacaagacactcaatgattttc 50167367  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  50167368 actcacccaaggtgttt 50167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 75; Significance: 1e-34; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 196
Target Start/End: Complemental strand, 20937734 - 20937557
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||||||||||||||||  |||||||||| ||||||| |  |||| |||||||||||| ||| || ||||| ||| ||||||||||||||||||||||    
T  20937734 aaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctattttccgatctctttctatgaacaagagactcaatgatt 20937635  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
     |||||| | ||| ||||| |||||| ||| ||||||||||||||| || ||| |||||||||||| |  |||||||||    
T  20937634 gcactcatctaagctgttttccaattatttctcaactctagaatct-actcccaaaagagaaccaacctttatcctttg 20937557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 183
Target Start/End: Original strand, 26323164 - 26323330
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat- 116  Q
    |||| |||||||||||||| ||||||||||  ||| ||| |  ||||||||||| |||| ||||| ||||||||| |||||||||||| ||| ||||||     
T  26323164 aaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttacccttttctcaatctcatcccatgaacaagacacttaatgatg 26323263  T
Q  117 ttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||||||||  ||||||||||||||||||||  |||||||| |||||||||| | ||||||||||||    
T  26323264 ttcactcactcaaggtgtttcccaattgtttcccaactctaaaatctaaccctcaaaagagaaccaa 26323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 46860548 - 46860386
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--ttt 118  Q
    ||||||||||||||| ||||||||||| || | ||||  ||||||||||||||||  ||||| ||||||||  | |||||||||| ||||| |||  |||    
T  46860548 gggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctcac-caatgaacaagacactcattgaatttt 46860450  T
Q  119 cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    ||||| || ||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||    
T  46860449 cactctcccaaggtgtttac-aattgtttctcaactctagaatctaacccccaaaagagaaccaa 46860386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 185
Target Start/End: Original strand, 5433966 - 5434134
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttc--ccaatctcattccatgaacaagagactcaatg 114  Q
    ||||||||||||||||||| |||| |||||| || | |||| |||| ||||||||||||| |||||  |||||||||  | |||||||||| ||||||||    
T  5433966 aaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttctaccattttctcccaatctcac-caatgaacaagacactcaatg 5434064  T
Q  115 attt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatc 185  Q
    |||| |||||||||| ||||||| | ||||||||  |||||||| |||||||||||| |||||||| |||||    
T  5434065 attttcactcaccaa-ggtgtttac-aattgtttcccaactctataatctaacccccaaaagagaatcaatc 5434134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 23 - 185
Target Start/End: Complemental strand, 30236198 - 30236037
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-ca 120  Q
    |||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||| | |||||||||| ||||| |||||| ||    
T  30236198 ggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcat-caatgaacaagacactca-tgattttca 30236101  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatc 185  Q
    ||  || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||||    
T  30236100 ctatcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaatc 30236037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 4570024 - 4569852
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| ||||||| ||| || | | ||  || |||||||||||||  ||||||||||||||  | | |||||| | |||||||||||| |||    
T  4570024 gttacaagaaattagcttcaataagctcacaatgaacaaccctaatttctacccattttcccaatctcac-caaagaacaaaacactcaatgattttcac 4569926  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||||| ||||||||| | ||||||||| |||||||||||||||||| || |||||||||||| || || ||||||    
T  4569925 tcacccaaggtgtttac-aattgttttccaactctagaatctaaccaccaaaagagaaccaacccttagcctttg 4569852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 147
Target Start/End: Original strand, 35138796 - 35138926
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||| ||| |||||||||  |||||||||  || ||||||  |||| |||||||||||  |||| ||||||| |||||||||||||| ||||||||| |    
T  35138796 aaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttctcaatctctttccatgaacaagacactcaatgatt 35138895  T
Q  117 ttcactcaccaaaggtgtttcccaattgttt 147  Q
    ||||||| || |||||||||| |||||||||    
T  35138896 ttcactctcccaaggtgtttcacaattgttt 35138926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 5236550 - 5236665
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  5236550 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 5236648  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  5236649 actcacccaaggtgttt 5236665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 1313895 - 1314014
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    |||||| || ||||||||| |||| |||||| ||||||||| |||||| |||||| |||| ||||| ||||||| |  || ||| |||||||||||| ||    
T  1313895 aaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataatttttacccttttctcaatctcttctcaagaataagagactcaataat 1313994  T
Q  117 ttcactcaccaaaggtgttt 136  Q
    |||||||||| |||||||||    
T  1313995 ttcactcacccaaggtgttt 1314014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 45095241 - 45095131
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| ||||||||||||||  | |||||||||| ||||||||| |    
T  45095241 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttcccaatctca-ccaatgaacaagacactcaatgatt 45095143  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  45095142 ttcactcaccaa 45095131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 34491284 - 34491114
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgatttcact 122  Q
    ||||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | ||||| || | |||||   ||||||||    
T  34491284 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcac-caatgaataacacactcaga-atttcact 34491187  T
Q  123 caccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    | || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  34491186 ctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 34491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 49199558 - 49199724
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| ||||||||||| || | ||||  || | ||||||||| || ||||||||||||||  | | |||||||| |||| |||    
T  49199558 caaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttcccaatctca-ccaacgaacaagacactc-atg 49199655  T
Q  115 a-tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    | |||||||| || || ||||||  |||||||||  ||||||||||||||||||||| ||||||||||||    
T  49199656 attttcactctcccaaagtgttt-acaattgtttcccaactctagaatctaacccccaaaagagaaccaa 49199724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 180
Target Start/End: Complemental strand, 54593778 - 54593621
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||| ||||| ||||||||||| || | ||||  || |||||||||| | | ||||||||||||||  | |||||||||| ||||| |||||| |    
T  54593778 gggttacaataaattagcttcaacaagctcacaaagaacaaccctaatttctgcacattttcccaatctcac-caatgaacaagacactca-tgattttc 54593681  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaac 180  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||    
T  54593680 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaac 54593621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 6095693 - 6095853
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    |||||||||||||||  |||||| |||||  | ||||  || |||||||||||| | ||||||||||||||  | ||||| |||| ||||| |||||| |    
T  6095693 gggttacaagaaattaacttcaagaagtttacaaagaacaaccctaatttctactcattttcccaatctcac-caatgaataagacactca-tgattttc 6095790  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  6095791 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaa 6095853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5258234 - 5258346
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  5258234 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaacaagacactcaatga 5258332  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  5258333 ttttcactcaccaa 5258346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 51398886 - 51398773
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| |||||||||||||| | ||||  || ||||||||||| || |||| ||||||||| || |||||||||| ||||||||| ||||||    
T  51398886 gttacaagaaattagcttcaacaagttcactaagaacaaccctaatttctacccatttttccaatctca-tcaatgaacaagacactcaatgattttcac 51398788  T
Q  122 tcaccaaaggtgttt 136  Q
    ||| | |||||||||    
T  51398787 tcatccaaggtgttt 51398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 23200228 - 23200338
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  ||  |||||||||||| |||||||||||||||  ||| |||||||| |||||||||     
T  23200228 aaaagggttacaagaaattagctttgacaagttcacaaagaacaactctaatttctaccatttttcccaatctca--ccaagaacaagacactcaatgat 23200325  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  23200326 tttcactcaccaa 23200338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 107
Target Start/End: Original strand, 4055860 - 4055943
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagaga 107  Q
    ||||||||||||||  |||  ||||||||||||||| | |||||||||||||||  |||||||||||| | ||||||||||||||    
T  4055860 ggttacaagaaattaacttttacaagttctccaaga-acaacctaatttctacccatttcccaatctcttcccatgaacaagaga 4055943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 5373311 - 5373209
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||||||||||| ||||| ||||||||||| ||   ||| ||||| |||||||||||||  |||||||||||||| ||| |||||||||| ||||||||    
T  5373311 aaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttctacccttttttcccaatctc-ttcaatgaacaagacactcaatg 5373213  T
Q  115 attt 118  Q
    ||||    
T  5373212 attt 5373209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 7762343 - 7762232
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| ||||||||||||| |||||||||||||| | ||||  || ||||||||||| |||||||| ||||||||  | ||||| |||| |||||||||     
T  7762343 aaaagagttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccctttttctcaatctca-ccaatgaataagacactcaatgat 7762245  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  7762244 tttcactcaccaa 7762232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 116 - 196
Target Start/End: Complemental strand, 36018831 - 36018752
Alignment:
Q  116 tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||||||| || ||||||||| | ||||||||  |||||||||||||||| |||| |||||||||||||||||| ||||||    
T  36018831 tttcactctcccaaggtgtttac-aattgtttcccaactctagaatctaaaccccaaaagagaaccaatccatagcctttg 36018752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 141
Target Start/End: Complemental strand, 1683546 - 1683431
Alignment:
Q  26 tacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcac 125  Q
    ||||||||||| || |||| ||| |||| ||||   ||| ||||||||||| ||||| ||||||  ||||||||||||||||||| |||| |||||| |     
T  1683546 tacaagaaattagcatcaataagctctcgaagaacgaacttaatttctaccattttctcaatctatttccatgaacaagagactcgatgacttcactgat 1683447  T
Q  126 caaaggtgtttcccaa 141  Q
      ||||||||||||||    
T  1683446 acaaggtgtttcccaa 1683431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 129
Target Start/End: Original strand, 3148086 - 3148193
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    |||||||||||||| ||||||||||| ||| |||||  |||||||||||||| |  |||| ||||||| | |||  ||||| ||||||||| | ||||||    
T  3148086 ggttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttctatccatttctcaatctcttcccacaaacaaaagactcaattattttcac 3148185  T
Q  122 tcaccaaa 129  Q
    ||||||||    
T  3148186 tcaccaaa 3148193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 136
Target Start/End: Original strand, 44700573 - 44700687
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttca 120  Q
    |||||||||||||| ||||||||||  || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| |||||    
T  44700573 ggttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttca 44700671  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| |||||||||    
T  44700672 ctcacccaaggtgttt 44700687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 122
Target Start/End: Original strand, 50432754 - 50432849
Alignment:
Q  28 caagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttccc-aatctcattccatgaacaagagactcaatgatttcact 122  Q
    |||||||||  |||||||| | |||||||||  | |||||||||||||| ||||||| |||||||| |  ||| ||||||||||||||||||||||    
T  50432754 caagaaattaacttcaacacgctctccaagagcagacctaatttctacccttttcccgaatctcatcctgtgaccaagagactcaatgatttcact 50432849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5260413 - 5260525
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||| ||||| |||||||||    
T  5260413 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaccaagacactcaatga 5260511  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  5260512 ttttcactcaccaa 5260525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 40734570 - 40734457
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| | ||||||||| || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||||    
T  40734570 gttacaagaaattaggttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcac 40734472  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  40734471 tcacccaaggtgttt 40734457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 133
Target Start/End: Original strand, 22835096 - 22835208
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| |||||| || | ||||  |||||||||||||| || ||||||||||||||    |||||||||| ||||||||| ||||    
T  22835096 gggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttc 22835194  T
Q  120 actcaccaaaggtg 133  Q
    ||||||| ||||||    
T  22835195 actcacccaaggtg 22835208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 23198029 - 23198139
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||  |||||||| | || |  ||  |||||||||||| |||||||||||||||  ||| |||||||| |||||||||     
T  23198029 aaaagggttacaagaaattagctttgacaagttcacaaaaaacaactctaatttctaccatttttcccaatctca--ccaagaacaagacactcaatgat 23198126  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  23198127 tttcactcaccaa 23198139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 33191910 - 33191801
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    |||| ||||||||||| || ||||||||||| |||| |||| |||||| || |||||||  ||||| ||||||| | |||  ||||||||||||||| ||    
T  33191910 aaaatggttacaagaacttagcttcaacaagctctctaagaacaaaacatagtttctactattttctcaatctcttaccaataacaagagactcaattat 33191811  T
Q  117 ttcactcacc 126  Q
    |||| |||||    
T  33191810 ttcaatcacc 33191801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 118
Target Start/End: Complemental strand, 37408536 - 37408436
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| |||||||||||||||||  | |||||||||| ||||||| ||    
T  37408536 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaataat 37408438  T
Q  117 tt 118  Q
    ||    
T  37408437 tt 37408436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 7764542 - 7764434
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||| ||||||||||||| |||| ||||||||| | ||||  || ||||||||||||| |||||||  |||||  | |||||||||| ||||||||| |    
T  7764542 aaaagagttacaagaaattagctttaacaagttcacaaagaacaaccctaatttctacccttttccc--tctca-ccaatgaacaagacactcaatgatt 7764446  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  7764445 ttcactcaccaa 7764434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 19683979 - 19684098
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| || ||||||||||||||    |||||||||| | |||||||     
T  19683979 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-caaatgaacaagacattcaatgat 19684077  T
Q  116 tttcactcaccaaaggtgttt 136  Q
    ||||||||||| |||||||||    
T  19684078 tttcactcacccaaggtgttt 19684098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 183
Target Start/End: Complemental strand, 47304208 - 47304165
Alignment:
Q  140 aattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||    
T  47304208 aattgttttccaactctagaatctaacccccaaaagagaaccaa 47304165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 22 - 91
Target Start/End: Complemental strand, 29813137 - 29813067
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctca 91  Q
    ||||||||||||||| |||||||||||||| | ||||  || |||||||||||||| |||| |||||||||    
T  29813137 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctatttttccaatctca 29813067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 39153457 - 39153570
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| |||| |||||| || | | ||  ||||||||||||||||  ||||||||||||||  | |||||||||| ||||||||| |||||     
T  39153457 gttacaagaaattagcttaaacaagctcacaatgaacaaacctaatttctacccattttcccaatctcacac-atgaacaagacactcaatgattttcat 39153555  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  39153556 tcacccaaggtgttt 39153570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 29196480 - 29196596
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-ttt 118  Q
    ||||| ||||||||| ||||  ||||| || | |||| |||| |||||||||||||  ||||||||||||||  | |||||||||| ||||||||| |||    
T  29196480 gggttccaagaaattagctttgacaagctcacaaagaacaaaccctaatttctacccattttcccaatctcac-caatgaacaagacactcaatgatttt 29196578  T
Q  119 cactcaccaaaggtgttt 136  Q
    |||||||| |||||||||    
T  29196579 cactcacccaaggtgttt 29196596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 44331616 - 44331504
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcact 122  Q
    |||||||||||| ||||||||||| || | | ||  || ||||||||||| || |||||| |||||||  | |||||||||| ||||||||| |||||||    
T  44331616 ttacaagaaattagcttcaacaagctcacaatgaacaaccctaatttctacccattttcctaatctca-ccaatgaacaagacactcaatgattttcact 44331518  T
Q  123 caccaaaggtgttt 136  Q
    |||| |||||||||    
T  44331517 cacccaaggtgttt 44331504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 29810942 - 29810827
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  ||  ||||||||||| | |||||| |||||||  | ||||| |||| | ||||||| ||||    
T  29810942 gggttacaagaaattagcttcaacaagttcacaaagaacaactctaatttctacatattttcctaatctca-ccaatgaataagacattcaatgattttc 29810844  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  29810843 actcacccaaggtgttt 29810827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 31314519 - 31314404
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | | ||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  31314519 gggttacaagaaattagcttcaacaagatcacaatgaacaaccctaatttctacccattttctcaatctca-cctatgaacaagacactcaatgattttc 31314421  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| || ||||||    
T  31314420 actcacccaaagtgttt 31314404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 141
Target Start/End: Complemental strand, 36796864 - 36796740
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    ||||| ||||| ||||||||   ||||||||| ||| ||| |  ||| ||||||||||||  |||| ||||| | |  ||||||||||||||||| | ||    
T  36796864 aaaaatggttataagaaattatgttcaacaagctcttcaaaaataaaactaatttctaccaatttctcaatcccttcacatgaacaagagactcagttat 36796765  T
Q  117 ttcactcaccaaaggtgtttcccaa 141  Q
    ||| |||| | ||||||||||||||    
T  36796764 ttctctcatccaaggtgtttcccaa 36796740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 40913297 - 40913253
Alignment:
Q  139 caattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||||||||  ||||||||||||||||||||| ||||||||||||    
T  40913297 caattgtttcccaactctagaatctaacccccaaaagagaaccaa 40913253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 25173626 - 25173727
Alignment:
Q  61 aaacctaatttctacctttttccc-aatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctaga 159  Q
    |||||||||||||||| ||||||  ||||||   || ||| |||||||||||||||||||||| ||| |||||||||  ||||||||| ||||||  |||    
T  25173626 aaacctaatttctacccttttccagaatctctagccgtgaccaagagactcaatgatttcacttacc-aaggtgttt-acaattgtttctcaacttaaga 25173723  T
Q  160 atct 163  Q
    ||||    
T  25173724 atct 25173727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 32891176 - 32891062
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttca 120  Q
    ||||||||||||| ||||||||||| || | ||| ||||||| ||||||||| || ||||| ||||||||  | | |||||||| ||||||||| ||| |    
T  32891176 gttacaagaaattagcttcaacaagctcacaaagaacaaaacttaatttctacccattttctcaatctca-ccgaagaacaagacactcaatgattttta 32891078  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| |||||||||    
T  32891077 ctcacccaaggtgttt 32891062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 29 - 167
Target Start/End: Complemental strand, 39127614 - 39127475
Alignment:
Q  29 aagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcactcacca 127  Q
    |||||||| ||||||||||| || ||||||  |||| |||||| ||| | |||| ||||||| |  |||||| ||||  |||||||| ||||||||  |     
T  39127614 aagaaattagcttcaacaagctcaccaagaacaaacataatttatacttatttctcaatctcttctcatgaataagacgctcaatgattttcactcttcc 39127515  T
Q  128 aaggtgtttcccaattgtttttcaactctagaatctaacc 167  Q
    ||||| ||| ||||||||||   ||||||||||| |||||    
T  39127514 aaggtattttccaattgtttccaaactctagaatttaacc 39127475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 183
Target Start/End: Original strand, 41819611 - 41819778
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| ||||  ||||| || | || |  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||    
T  41819611 caaaatgggttacaagaaattagcttagacaagctcacaaaaaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tg 41819708  T
Q  115 a--tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |  |||||||| || ||||||||| | |||| |||  |||||||||||||||||| |  ||||||||||||    
T  41819709 aattttcactctcccaaggtgtttac-aattatttcccaactctagaatctaaccgctaaaagagaaccaa 41819778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 9636216 - 9636328
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| | ||  |||||||| | ||||  || |||||||||||||  ||| |||||||||||  | |||| ||||| |||||||||    
T  9636216 aaaagggttacaagaaattagttttgacaagttcacaaagaacaaccctaatttctacccttttctcccaatctca-ccaatgaccaagacactcaatga 9636314  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  9636315 ttttcactcaccaa 9636328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 43401898 - 43402010
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| ||||||||||| || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| |||| |||| ||||||    
T  43401898 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactc-atgattttcac 43401995  T
Q  122 tcaccaaaggtgttt 136  Q
    || || |||||||||    
T  43401996 tctcccaaggtgttt 43402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 132
Target Start/End: Original strand, 53921599 - 53921708
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| |||| |||||| || | || |  ||||||||||||||||  |||| |||||||||  | |||||||||| ||||||||| ||||||    
T  53921599 gttacaagaaattagctttaacaagctcacaaacaacaaacctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattttcac 53921697  T
Q  122 tcaccaaaggt 132  Q
    ||||| |||||    
T  53921698 tcacccaaggt 53921708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 2020179 - 2020119
Alignment:
Q  65 ctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcac 125  Q
    |||| |||||||  |||| ||||||| | |||| ||||||||||||||||| |||||||||    
T  2020179 ctaacttctacccatttctcaatctcttcccataaacaagagactcaatgaattcactcac 2020119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 169
Target Start/End: Original strand, 31340297 - 31340441
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacct-aatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-ca 120  Q
    |||||| |||||| ||||||||||| || | |||| | ||||| ||||||||||  ||||||||||||||  | |||||||| | ||||| |||||| ||    
T  31340297 gttacatgaaattagcttcaacaagctcacaaaga-acaacctcaatttctaccaattttcccaatctcac-caatgaacaaaacactca-tgattttca 31340393  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaacccc 169  Q
    ||| || ||||||||| | ||||||||  ||||||||||||||||||||    
T  31340394 ctctcccaaggtgtttac-aattgtttcccaactctagaatctaacccc 31340441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 40735456 - 40735361
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgattt 118  Q
    |||||||| ||||| ||||||||||| || | ||||  || ||||||||||| || ||||| ||||||||  | |||||||||| ||||||||||||    
T  40735456 ggttacaataaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattt 40735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 1e-30; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 18 - 169
Target Start/End: Complemental strand, 32091556 - 32091405
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    ||||| ||||||||||||| | ||||||||  |||||||||  |||||||||||||| | ||||||||||||  | ||||||||||||||||||||||||    
T  32091556 aaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaatcttctcccatgaacaagagactcaatgatt 32091457  T
Q  118 tcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacccc 169  Q
    || |||||| || ||||||| |||||||||   |||| |||||||| |||||    
T  32091456 tcgctcacccaatgtgtttctcaattgtttccaaactttagaatcttacccc 32091405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 16 - 196
Target Start/End: Complemental strand, 2209793 - 2209614
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| ||||||||||| || | |||| ||| |||||||||||||  ||||||||||||||  | |||||||||| ||||| ||    
T  2209793 caaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaccctaatttctacccattttcccaatctcaa-caatgaacaagacactca-tg 2209696  T
Q  115 attt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| ||||| || ||||||||| | |||| |||  ||||||||||||||||||||| |||||||||||| ||||| ||||||    
T  2209695 attttcactctcccaaggtgtttac-aattatttcccaactctagaatctaacccccaaaagagaaccaacccatagcctttg 2209614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 23 - 124
Target Start/End: Original strand, 44967924 - 44968026
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcac 121  Q
    |||||||||||||| |||||| |||| ||||||||| |||||||||||||||||| ||||||||||||| | ||| |||||| || ||||||||||||||    
T  44967924 ggttacaagaaattggcttcagcaagctctccaagagcaaaacctaatttctaccattttcccaatctcttcccaagaacaacaggctcaatgatttcac 44968023  T
Q  122 tca 124  Q
    |||    
T  44968024 tca 44968026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 22882841 - 22883021
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    ||||||||||||||||||| ||||||||||  |||||||||  ||||||||||| || |  |||  ||||||| |||||||||||||  |||||||||||    
T  22882841 aaaagggttacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaggcactcaatgatt 22882940  T
Q  118 t-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacccccc-aaagagaaccaatccatatcctttg 196  Q
    | ||||  |  || | ||| || ||||||||| ||| |||||||||||||||||| |||||||||||| |  |||||||||    
T  22882941 ttcactttctcaaagcgttacctaattgttttccaattctagaatctaaccccccaaaagagaaccaaccattatcctttg 22883021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 18 - 196
Target Start/End: Original strand, 22934505 - 22934685
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    ||||||||||||||||||| ||||||||||  |||||||||  ||||||||||| || |  |||  ||||||| |||||||||||||  |||||||||||    
T  22934505 aaaagggttacaagaaattagcttcaacaaactctccaagaacaaacctaatttttatccatttttcaatctctttccatgaacaaggcactcaatgatt 22934604  T
Q  118 t-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacccccc-aaagagaaccaatccatatcctttg 196  Q
    | ||||  |  || | ||| || ||||||||| ||| |||||||||||||||||| |||||||||||| |  |||||||||    
T  22934605 ttcactttctcaaagcgttacctaattgttttccaattctagaatctaaccccccaaaagagaaccaaccattatcctttg 22934685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 40632518 - 40632359
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-ca 120  Q
    |||||||||||||| ||||||||||| || | ||||  ||  ||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| ||    
T  40632518 ggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttca 40632421  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    ||| || ||||||||| | |||||||| |||||||||||||||||||||| ||||||||||||    
T  40632420 ctctcccaaggtgtttac-aattgtttctcaactctagaatctaacccccaaaagagaaccaa 40632359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 48143121 - 48143001
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct--ttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| |||||||||||||| | ||||  || ||||||||||||||  ||||||||||||||  | |||||||||| |||||||||    
T  48143121 aaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctttttttcccaatctca-ccaatgaacaagacactcaatga 48143023  T
Q  116 -tttcactcaccaaaggtgttt 136  Q
     ||||||||||| |||||||||    
T  48143022 ttttcactcacccaaggtgttt 48143001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 6677547 - 6677440
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag--acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||||||||| ||||||||  | ||||||||||||||||| |||| ||||| || | ||| |||||||||||||||| |    
T  6677547 aaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacctaatttctaccatttt-ccaatttcttcccaagaacaagagactcaatta 6677449  T
Q  116 tttcactca 124  Q
    |||||||||    
T  6677448 tttcactca 6677440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 183
Target Start/End: Complemental strand, 12119617 - 12119451
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacc-taatttctac-ctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||||| |||||| | ||||  ||||| |||||||||| |||||| |||||||||  | |||||||||| ||||| |||    
T  12119617 aaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaaccataatttctactcttttttccaatctcac-ctatgaacaagacactcattga 12119519  T
Q  116 ttt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    ||| ||||| || ||||| ||| | ||||||||  |||||||| |||||||||||| ||||||||||||    
T  12119518 ttttcactctcccaaggtatttac-aattgtttcccaactctataatctaacccccaaaagagaaccaa 12119451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 144
Target Start/End: Original strand, 38811301 - 38811405
Alignment:
Q  40 ttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtttccc 139  Q
    ||||||||  |||||||||  |||| |||||| ||||  |||| ||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||    
T  38811301 ttcaacaaactctccaagaacaaacttaatttgtacccatttctcaatctctttctatgaacaagagactcaatgatttcactcacccaaggtgtttacc 38811400  T
Q  140 aattg 144  Q
    |||||    
T  38811401 aattg 38811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 54883094 - 54882921
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | || |  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  54883094 gggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 54882997  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  54882996 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 54882921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 56178727 - 56178838
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||||||||||||||||| |||||||||||||| | ||||  || ||||||||||| |||||||||||||||||  | |||||||||| |||||||||     
T  56178727 aaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgat 56178825  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  56178826 tttcactcaccaa 56178838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 61 - 183
Target Start/End: Complemental strand, 41961452 - 41961324
Alignment:
Q  61 aaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgtt------tcccaattgtttttcaact 154  Q
    |||| ||||||||||  |||| |||||||| |  |||||||||||||||||||||||||| ||| | ||||||||      ||||||||||||  |||||    
T  41961452 aaacttaatttctactctttttccaatctcttctcatgaacaagagactcaatgatttcaatcagccaaggtgtttccctttcccaattgtttcccaact 41961353  T
Q  155 ctagaatctaaccccccaaagagaaccaa 183  Q
    |||||||||||||| | ||||||||||||    
T  41961352 ctagaatctaaccctcaaaagagaaccaa 41961324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 34570508 - 34570623
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || |||||||||||||| ||||||||||||||  | |||||||||| ||||||||| ||||    
T  34570508 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctattttcccaatctca-ccaatgaacaagacactcaatgattttc 34570606  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| ||| |||||    
T  34570607 actcacccaagatgttt 34570623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 55085462 - 55085632
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcactc 123  Q
    |||||||||||| ||||||||||| || | ||||  || | |||||||||||| ||| |||||||||  | |||||||||| | ||||||| ||||||||    
T  55085462 ttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacctattttccaatctca-ccaatgaacaagacagtcaatgattttcactc 55085560  T
Q  124 accaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||| |||||||||  |||||||||   |||||||||||||||||||| || ||||| ||| || || ||||||    
T  55085561 acccaaggtgttt-acaattgtttccgaactctagaatctaacccccaaaggagaatcaacccttagcctttg 55085632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 379454 - 379279
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga--ttt 118  Q
    ||||||||||||||| ||||||||||| || | ||||  ||||||||||||||||  ||||| ||||||||    |||||||||| ||| | |||  |||    
T  379454 gggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttctcaatctcacaa-atgaacaagatactaattgaatttt 379356  T
Q  119 cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||||| || ||||||||| | ||||||||  ||||||||||||||||||| | |||||||||||| || || ||||||    
T  379355 cactctcccaaggtgtttac-aattgtttcccaactctagaatctaacccacaaaagagaaccaacccttagcctttg 379279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 50673943 - 50674113
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| ||||||||||| || | |||||||  |||||||||||| | ||||| ||||||||    ||||||| || ||||| |||||| |||    
T  50673943 gttacaagaaattagcttcaacaagctcacaaagacaat-cctaatttctactcattttctcaatctcacaa-atgaacacgacactca-tgattttcac 50674039  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    || || ||||||||| | ||||||||| ||||||||||||||||||||| |||||||||||| || || ||||||    
T  50674040 tctcccaaggtgtttac-aattgttttccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 50674113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 5871899 - 5871779
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||| |||||||||||||||||||| |||||| || | ||||  |||||||||||||| || |||| |||||||||  | |||||||||| |||||||||    
T  5871899 aaaatgggttacaagaaatttgcttaaacaagctcacaaagaacaaacctaatttctacccatttttccaatctca-ccaatgaacaagacactcaatga 5871801  T
Q  116 -tttcactcaccaaaggtgttt 136  Q
     ||||||||||| |||||||||    
T  5871800 ttttcactcacccaaggtgttt 5871779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 124
Target Start/End: Original strand, 21703925 - 21704033
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatg 114  Q
    |||||||||| |||||||||   |||||||||| | || |||| |||||||||||||||||||||||| ||||||| | ||| |||||| ||||| ||||    
T  21703925 caaaaagggt-acaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaacaatagacttaatg 21704023  T
Q  115 atttcactca 124  Q
    ||||||||||    
T  21704024 atttcactca 21704033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 136
Target Start/End: Original strand, 37229811 - 37229931
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||||||||||||| |||||||||| |||||| || | ||| ||| | ||||||||||||| ||||||||||||||  | |||||||||| ||||| |||    
T  37229811 aaaaagggttacaacaaatttgctttaacaagctcacaaagaacacaccctaatttctaccattttcccaatctca-ccaatgaacaagacactcattga 37229909  T
Q  116 -tttcactcaccaaaggtgttt 136  Q
     ||||||||||| |||||||||    
T  37229910 ttttcactcacccaaggtgttt 37229931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 5429753 - 5429638
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||| | ||||||||||||||  | |||||||||| ||||||||| ||||    
T  5429753 gggttacaagaaattagcttcaacaagctcacgaagaataaccctaatttctactcattttcccaatctca-ccaatgaacaagacactcaatgattttc 5429655  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  5429654 actcacccaaggtgttt 5429638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 54200000 - 54200115
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  54200000 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 54200098  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| || ||||||    
T  54200099 actcacccaatgtgttt 54200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 183
Target Start/End: Complemental strand, 46703580 - 46703413
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||||| |||| |||||| || | ||||  || |||||||||||| | ||||||||||||||  | |||||||||| ||||| ||    
T  46703580 caaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctactcattttcccaatctcac-caatgaacaagacactca-tg 46703483  T
Q  115 a--tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |  |||||||| || ||||||||| | ||||||||  |||| ||| |||||||||||| ||||||||||||    
T  46703482 aattttcactctcccaaggtgtttac-aattgtttcccaacactataatctaacccccaaaagagaaccaa 46703413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 8665482 - 8665308
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga--ttt 118  Q
    ||||||||||||||| ||||||||||| |||| ||||  || ||||||||||| || |||||||| |||||  | |||||||||| |||| ||||  |||    
T  8665482 gggttacaagaaattagcttcaacaagctctcaaagaacaaccctaatttctacccattttcccattctca-ccaatgaacaagacactc-atgaatttt 8665385  T
Q  119 cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||||  | |||||||||  |||||||||  |||||| |||||||||||||| ||||| ||||||  |||| ||||||    
T  8665384 cactcttccaaggtgttt-acaattgtttcccaactccagaatctaacccccaaaagaaaaccaacacataacctttg 8665308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 183
Target Start/End: Complemental strand, 12073464 - 12073306
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||| ||||| ||||||||||| || | ||||  ||||||||||||||||  ||||||||||||||  | || | ||||| ||||| |||||| |||    
T  12073464 gttacaataaattagcttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctcac-caataagcaagacactca-tgattttcac 12073367  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
     | || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  12073366 actcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaa 12073306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 12739644 - 12739759
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| |||||||||||| |    
T  12739644 gggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctatccattttcccaatctca-ccaatgaacaagacactcaatgatttcc 12739742  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  12739743 actcacctaaggtgttt 12739759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 12747850 - 12747965
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| |||||||||||| |    
T  12747850 gggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctatccattttcccaatctca-ccaatgaacaagacactcaatgatttcc 12747948  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  12747949 actcacctaaggtgttt 12747965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 196
Target Start/End: Original strand, 35369542 - 35369708
Alignment:
Q  29 aagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcactcacca 127  Q
    |||||||| | |||| |||| || ||||||  |||||||||||||||   ||||||||| || | | |||||||||| ||||||||| ||||||||  |     
T  35369542 aagaaattagtttcatcaagctcaccaagaacaaacctaatttctactcatttcccaatgtcttgcaatgaacaagacactcaatgattttcactctac- 35369640  T
Q  128 aaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||||||||||||||||||||  ||| |||| |||| || |||| |||||||||||| || || ||||||    
T  35369641 aaggtgtttcccaattgtttcccaattctataatccaa-ccccaaaagagaaccaacccttagcctttg 35369708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 36994598 - 36994483
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || | ||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  36994598 gggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 36994500  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  36994499 actcacccaaggtgttt 36994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 136
Target Start/End: Original strand, 47038507 - 47038618
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttcactc 123  Q
    |||||||||||| ||||||||||| || | ||||  || |||||||||||||  ||| |||||||||  | |||||||||| ||||||||| ||||||||    
T  47038507 ttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttccaatctca-ccaatgaacaagacactcaatgattttcactc 47038605  T
Q  124 accaaaggtgttt 136  Q
    ||| |||||||||    
T  47038606 acccaaggtgttt 47038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 52095456 - 52095571
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  52095456 gggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 52095554  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  52095555 actcacccaaggtgttt 52095571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 121
Target Start/End: Complemental strand, 34112895 - 34112790
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac--ctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||||||||||| |||||| ||||||||||| ||||| |||  |||| ||||||||||   ||||| |||||||| | ||||| |||| || ||||||||    
T  34112895 aaaagggttacatgaaattagcttcaacaagctctcctagaacaaacataatttctactttttttttccaatctcttcccatgtacaaaaggctcaatga 34112796  T
Q  116 tttcac 121  Q
    ||||||    
T  34112795 tttcac 34112790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 178
Target Start/End: Complemental strand, 41639500 - 41639345
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||| |||||| | ||||  || |||||||||||||  |||||||||||| |  | || ||||||| ||||  |||||| |    
T  41639500 gggttacaagaaattagcttcaaaaagttcacaaagaacaaccctaatttctacccattttcccaatcttac-caataaacaagacactcg-tgattttc 41639403  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagaga 178  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||    
T  41639402 actctcctaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagaga 41639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 183
Target Start/End: Original strand, 50262795 - 50262952
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || | ||||||| | || ||||||||||||||    || ||||||| ||||| |||||| |    
T  50262795 gggttacaagaaattagcttcaacaagctcacaaagaacaaccgtaatttcgatccattttcccaatctca----ataaacaagacactca-tgattttc 50262889  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || ||||| ||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  50262890 actctcccaaggtatttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaa 50262952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 136
Target Start/End: Complemental strand, 4588037 - 4587917
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||||||||| |  | ||| ||||| | ||||||||||| ||||||||||| |||  | ||||||| || |||||||||    
T  4588037 aaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatcttaatttctaccttttttcccaatttca-ccaatgaacatgacactcaatga 4587939  T
Q  116 -tttcactcaccaaaggtgttt 136  Q
     ||||||||||| |||||||||    
T  4587938 ttttcactcacccaaggtgttt 4587917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 136
Target Start/End: Original strand, 6766209 - 6766285
Alignment:
Q  61 aaacctaatttctacctttttccc-aatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgttt 136  Q
    |||||||||||||| ||||||||| ||||||   || ||| |||||||||||||||||||||||||| || ||||||    
T  6766209 aaacctaatttctatctttttcccgaatctctacccgtgaccaagagactcaatgatttcactcacccaaagtgttt 6766285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Original strand, 9927552 - 9927659
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | ||||| |||| ||||| ||| ||||    
T  9927552 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaataagacactcagtgattttc 9927650  T
Q  120 actcaccaa 128  Q
    |||||||||    
T  9927651 actcaccaa 9927659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 26175730 - 26175845
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttct-acctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| | ||||||||| || | ||||  || ||||||||||  || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  26175730 gggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttctccccattttcccaatctca-ccaatgaacaagacactcaatgattttc 26175828  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  26175829 actcacccaaggtgttt 26175845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 33089956 - 33089832
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    |||| ||||| || ||||| ||||||||||| |||||||||  |||| |||||||||    | || ||||||| | |||||||||||| ||||||||| |    
T  33089956 aaaatggttataataaattagcttcaacaagctctccaagaacaaacataatttctattcatctctcaatctcttcccatgaacaagacactcaatgatt 33089857  T
Q  117 ttcactcaccaaaggtgtttcccaa 141  Q
    |||||||  | ||||||||||||||    
T  33089856 ttcactcttccaaggtgtttcccaa 33089832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 36463483 - 36463598
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | | ||  |  ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  36463483 gggttacaagaaattagcttcaacaagctcacaatgaacagccctaatttctatccattttcccaatctcac-caatgaacaagacactcaatgaatttc 36463581  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  36463582 actcacccaaggtgttt 36463598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 37740699 - 37740592
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || |||||||| || ||||||||| |||||||  | |||||||||| ||||| ||| ||||    
T  37740699 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttataccctttttccaaatctca-ccaatgaacaagacactcagtgattttc 37740601  T
Q  120 actcaccaa 128  Q
    |||||||||    
T  37740600 actcaccaa 37740592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 29999897 - 30000007
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    ||||| ||||||||||||| ||||  ||| |||| | ||||  || ||||||||||||| ||||||||||||||  | |||||||||| |||||| || |    
T  29999897 aaaagagttacaagaaattagctttgacatgttcacaaagaacaaccctaatttctacccttttcccaatctca-ccaatgaacaagacactcaacgatt 29999995  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  29999996 ttcactcaccaa 30000007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 43135551 - 43135622
Alignment:
Q  94 ccatgaacaagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaa 165  Q
    |||||||||||| | |||||| ||||||| | | |||||||||| |||||||||  ||||||||||||||||    
T  43135551 ccatgaacaagaaattcaatggtttcacttatccaaggtgtttctcaattgtttcccaactctagaatctaa 43135622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 20 - 136
Target Start/End: Original strand, 5207934 - 5208051
Alignment:
Q  20 aagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tt 117  Q
    ||||||| ||| ||||| |||||||||||||| | ||| ||||| ||||||||||||| |||| |||||| | | | |||||||||  ||| ||||| ||    
T  5207934 aagggttgcaataaattagcttcaacaagttcacaaagaacaaaccctaatttctaccctttttccaatcac-tccaatgaacaagtcactaaatgattt 5208032  T
Q  118 tcactcaccaaaggtgttt 136  Q
    ||||||||| |||||||||    
T  5208033 tcactcacccaaggtgttt 5208051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 83
Target Start/End: Original strand, 34788865 - 34788930
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcc 83  Q
    ||||| |||||||||||||  |||||||||| |||||||||  || ||||||||||||| ||||||    
T  34788865 aaaagagttacaagaaattaacttcaacaagctctccaagagcaatcctaatttctaccattttcc 34788930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 26364308 - 26364240
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctca 91  Q
    ||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||    
T  26364308 gttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca 26364240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 48142470 - 48142577
Alignment:
Q  20 aagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tt 117  Q
    ||||||||||||||| | ||||||||||| || | ||| ||||| ||||||||||| | | |||||||||||| || |||  ||||| ||||||||| ||    
T  48142470 aagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttctatcatgttcccaatctca-tcaatgggcaagacactcaatgattt 48142568  T
Q  118 tcactcacc 126  Q
    |||||||||    
T  48142569 tcactcacc 48142577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 6542269 - 6542390
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatg 114  Q
    |||||| | |||||||||| | ||||||||| || | |||| |||| |||||||||||||  ||||||||||||||   | |||||||||| |||||||     
T  6542269 aaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcctaatttctaccattttttcccaatctccc-caatgaacaagacactcaata 6542367  T
Q  115 attt-cactcaccaaaggtgttt 136  Q
    |||| |||||||| |||||||||    
T  6542368 attttcactcacccaaggtgttt 6542390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 24969184 - 24969071
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| ||||||||||| || | ||||  ||| |||||||||| || |||| |||||||||  | | ||||||||  |||||||| ||||||    
T  24969184 gttacaagaaattagcttcaacaagctcacaaagaacaaatctaatttctacccatttttccaatctca-ccaaagaacaagactctcaatgattttcac 24969086  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  24969085 tcacccaaggtgttt 24969071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 27994871 - 27994798
Alignment:
Q  44 acaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgattt 118  Q
    ||||||||||||||| | ||||||||||||||| |||| |||||| | || ||||||||| | |||||| |||||    
T  27994871 acaagttctccaaga-acaacctaatttctaccatttttccaatcactttacatgaacaaaatactcaaagattt 27994798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 5370173 - 5370290
Alignment:
Q  18 aaaagggttacaagaaatttgc-ttcaacaagttctccaagacaaaacctaatttctacc----tttttcccaatctcattccatgaacaagagactcaa 112  Q
    ||||||||||||||||||| || ||  |||||||| | ||||  || |||||||||||||    ||||| |||||||||  | |||||||||| ||||||    
T  5370173 aaaagggttacaagaaattagcttttgacaagttcacaaagaacaaccctaatttctacctcttttttttccaatctca-ccaatgaacaagacactcaa 5370271  T
Q  113 tga-tttcactcaccaaag 130  Q
    ||| |||||||||||||||    
T  5370272 tgattttcactcaccaaag 5370290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 12745530 - 12745645
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| | ||  |||||||| | ||||  || |||||||||||||  |||||| ||||||   | |||||||||| ||||||||| ||||    
T  12745530 gggttacaagaaattagttttgacaagttcacaaagaacaaccctaatttctacccattttcctaatctcgc-caatgaacaagacactcaatgattttc 12745628  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  12745629 actcacccaaggtgttt 12745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 35662398 - 35662354
Alignment:
Q  139 caattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||||||||  ||||||||||||||||| ||| ||||||||||||    
T  35662398 caattgtttcccaactctagaatctaacacccaaaagagaaccaa 35662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 52065676 - 52065561
Alignment:
Q  16 caaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||| ||||||||  ||| | ||||||| ||| |||| |||| | |||||||||||||||| ||||||||| || | |  ||| |||||||||| ||||    
T  52065676 caaaaggggttacagaaaaatagcttcaataagctctctaaga-acaacctaatttctacctgtttcccaatatcttccgttgatcaagagactcgatga 52065578  T
Q  116 -tttcactcaccaaagg 131  Q
     ||||||||||| ||||    
T  52065577 ttttcactcacccaagg 52065561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 52082751 - 52082866
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| | ||  |||||||| | ||||  || |||| ||||||||  ||||||||||||||  | |||||||||| | |||||||||| |    
T  52082751 gggttacaagaaattagttttgacaagttcacaaagaacaaccctagtttctacccattttcccaatctcac-caatgaacaagacagtcaatgattttc 52082849  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  52082850 actcacccaaggtgttt 52082866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 3e-25; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 44353865 - 44353693
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgatttc-ac 121  Q
    ||||||||||||| |||||||||||||| | ||||  || |||||||||||||  ||||||||||||||    |||||||||| ||||||||||||  ||    
T  44353865 gttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctcacaa-atgaacaagatactcaatgatttttac 44353767  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||||| || |||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  44353766 tcacccaatgtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 44353693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 41267047 - 41266938
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    ||||| ||||||||||||| |  ||||||||||||| |||| |||||||||||||||||| ||||| ||| ||| | | | |||||||||||||||||||    
T  41267047 aaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttctcaaactcttcctaagaacaagagactcaatgat 41266948  T
Q  117 ttcactcacc 126  Q
    ||||||||||    
T  41266947 ttcactcacc 41266938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 4283598 - 4283425
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | || |  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  4283598 gggttacaagaaattagcttcaacaagctcacaaaaaacaaccctaatttctacccattttcccaatctcac-caatgaacaagacactca-tgattttc 4283501  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  4283500 actctcctaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 4283425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 23 - 183
Target Start/End: Complemental strand, 10240227 - 10240071
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcac 121  Q
    |||||||||||||| | ||||||||| || | |||| |||| || |||||||| |||| |||||||||| | ||| |||||||||||||   |||||| |    
T  10240227 ggttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttctatctttgtcccaatctcctcccaagaacaagagactc---gatttcgc 10240131  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    ||||| ||| |||||| |||||||||  ||| ||||||||||||  ||||||||||||||||    
T  10240130 tcacctaagatgtttctcaattgtttcccaaatctagaatctaa--ccccaaagagaaccaa 10240071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 42498272 - 42498160
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct--ttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| |||||||||||||| | ||||  || ||||||||||||||  ||||||||||||||  | |||||||||| |||||||||    
T  42498272 aaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacctttttttcccaatctca-ccaatgaacaagacactcaatga 42498174  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  42498173 ttttcactcaccaa 42498160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 8965781 - 8965900
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    |||||||||| ||||||||  |||||||||  ||   |||| |||| ||||||||||||||||||||||||||||  | |||||||||| |||||||||     
T  8965781 aaaagggttataagaaattaacttcaacaaactcataaagaacaaaccctaatttctacctttttcccaatctca-ccaatgaacaagacactcaatgat 8965879  T
Q  116 tttcactcaccaaaggtgttt 136  Q
    ||||||||||| |||||||||    
T  8965880 tttcactcacccaaggtgttt 8965900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 15212860 - 15212745
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| | ||||||| ||||    
T  15212860 gggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacattcaatgattttc 15212762  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  15212761 actcacccaaggtgttt 15212745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 27811352 - 27811237
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  27811352 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 27811254  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  27811253 actcacccaaggtgttt 27811237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 123
Target Start/End: Original strand, 29796418 - 29796518
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaaccta-atttctacctttttcccaatctcattccatgaacaagagactcaatgatttcact 122  Q
    ||||||||||||  |||||||||||||||||||||  ||||||  ||||||||  ||||||||||||| |  || |||||||||||||||||| ||||||    
T  29796418 gttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctcttctcaagaacaagagactcaatgaattcact 29796517  T
Q  123 c 123  Q
    |    
T  29796518 c 29796518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 42435085 - 42435258
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||| |||||| |    
T  42435085 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactca-tgattttc 42435182  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || || |||||| | ||||||||  ||||||||||||||||||| | |||||||||||| || || ||||||    
T  42435183 actctcccaaagtgtttac-aattgtttaccaactctagaatctaaccctcaaaagagaaccaacccttagcctttg 42435258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 3231886 - 3232005
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    |||| ||||| || ||||| ||||||||||| || | |||| |||| |||||||||||| |||||| ||||||| | | | ||||||||||||||||||     
T  3231886 aaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatctcttcctaagaacaagagactcaatgaa 3231985  T
Q  117 ttcactcaccaaaggtgttt 136  Q
    ||||| |||| |||||||||    
T  3231986 ttcacccacccaaggtgttt 3232005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 11384057 - 11383887
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| ||||||||||  || | ||||  || |||||||||||||  |||| ||||||||||   |||||||||| ||||| |||||| |||    
T  11384057 gttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctacccatttttccaatctcata--atgaacaagacactca-tgattttcac 11383961  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    || || ||||||||| | |||| |||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  11383960 tctcccaaggtgtttac-aattatttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 11383887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 25 - 196
Target Start/End: Original strand, 33655402 - 33655572
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactca 124  Q
    |||| ||||||  ||||||||||  |||| ||||  ||| |||||||||| || ||||  ||| || |||||||||||||| ||||||||||||||||||    
T  33655402 ttacgagaaatcagcttcaacaaactctctaagaacaaatctaatttctatctatttcttaatatc-ttccatgaacaagacactcaatgatttcactca 33655500  T
Q  125 ccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
     | ||| ||||| | |||| |||| |||||||| ||| ||||||   |||||||||||| || || ||||||    
T  33655501 tccaagatgttttcaaattattttccaactctaaaatttaacccttgaaagagaaccaacccttaacctttg 33655572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 34254421 - 34254531
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    |||||||||||||||||||  |||  |||||||| | ||||  || ||||||||||||| ||||||||||||||  | |||||||||| ||||||||| |    
T  34254421 aaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctacccttttcccaatctca-ccaatgaacaagacactcaatgatt 34254519  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  34254520 ttcactcaccaa 34254531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 128
Target Start/End: Complemental strand, 38863913 - 38863838
Alignment:
Q  53 ccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaa 128  Q
    |||| ||||||||||||||||||| ||| || |||||| ||||| ||||||||||||||||||||| |||| ||||    
T  38863913 ccaaaacaaaacctaatttctaccatttccctaatctctttccaagaacaagagactcaatgattttactctccaa 38863838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 183
Target Start/End: Complemental strand, 40221819 - 40221659
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| | ||||||||| || | ||||  || |||||||||||||  |||| |||||||||  | | |||||||| ||||| |||||| |    
T  40221819 gggttacaagaaattagtttcaacaagctcacaaagaacaaccctaatttctacccattttaccaatctcac-caaagaacaagacactca-tgattttc 40221722  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaa 183  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| ||||||||||||    
T  40221721 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaa 40221659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 31218335 - 31218223
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  31218335 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttttcccaatctca-ccaatgaacaagacactcaatga 31218237  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  31218236 ttttcactcaccaa 31218223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 101 - 167
Target Start/End: Complemental strand, 40535833 - 40535767
Alignment:
Q  101 caagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacc 167  Q
    |||||||||||||| |||||||  |||||||||||||| ||||||||| |||||||| |||||||||    
T  40535833 caagagactcaatgttttcactacccaaaggtgtttcctaattgttttccaactctataatctaacc 40535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 25 - 136
Target Start/End: Complemental strand, 43036494 - 43036382
Alignment:
Q  25 ttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcact 122  Q
    |||||||||||| | |||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| |||||||    
T  43036494 ttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttcact 43036396  T
Q  123 caccaaaggtgttt 136  Q
    |||| |||||||||    
T  43036395 cacccaaggtgttt 43036382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 4731732 - 4731617
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| | ||||||||| || | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  4731732 gggttacaagaaattaggttcaacaagctcacaaagagcaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 4731634  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  4731633 actcacccaaggtgttt 4731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 11712091 - 11712198
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    ||||||||| ||||||||| ||||||||||| |||| | || ||||||||||||| ||   ||||| ||||||| | | | |||||| ||||||||||||    
T  11712091 aaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacctaatttatattattttctcaatctcttccaaagaacaaaagactcaatgat 11712190  T
Q  117 ttcactca 124  Q
    ||||||||    
T  11712191 ttcactca 11712198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 19491793 - 19491907
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgatttca 120  Q
    ||||||||||||||| | ||||||||| || | ||||  |||||||||||||| || ||||||||||||||  | |||||||||| |||||||  |||||    
T  19491793 gggttacaagaaattagtttcaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatattttca 19491891  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| ||| |||||    
T  19491892 ctcacccaagatgttt 19491907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 30291679 - 30291565
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttca 120  Q
    ||||||||||||| ||||||||||| || | ||| ||||||||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| |||||    
T  30291679 gttacaagaaattagcttcaacaagctcacaaagaacaaaacctaatttctacccattttctcaatctca-ccaatgaacaagacactcaatgattttca 30291581  T
Q  121 ctcaccaaaggtgttt 136  Q
     ||||| |||||||||    
T  30291580 atcacccaaggtgttt 30291565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 12702724 - 12702840
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc------tttttcccaatctcattccatgaacaagagactca 111  Q
    ||||||||||||||||||| |||||||||||||| | ||||  || |||||||||||||      |||||||||||||||  | |||||||||| ||| |    
T  12702724 aaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctacccttttttttttcccaatctca-ccaatgaacaagacactta 12702822  T
Q  112 atga-tttcactcaccaa 128  Q
    |||| |||||||||||||    
T  12702823 atgattttcactcaccaa 12702840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 17982731 - 17982619
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||||||||||||||||||  |||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  17982731 aaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaacaagacactcaatga 17982633  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  17982632 ttttcactcaccaa 17982619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 196
Target Start/End: Complemental strand, 40328851 - 40328680
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| | || |||||| || | ||||  ||||||||||||||||  ||||||||||||||    |||||||||| | ||| |||||| |||    
T  40328851 gttacaagaaattagtttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctcacaa-atgaacaagacattca-tgattttcac 40328754  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    || || ||| ||||| | ||||||||  ||||||||||||||||||||| ||||||||||||  |||| ||||||    
T  40328753 tctcccaagatgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaactcatagcctttg 40328680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 41364943 - 41365056
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| |||| |||||  || | ||||  ||||||||||||||||  |||||||||||||| | | ||||||||| ||||||||| ||||||    
T  41364943 gttacaagaaattagcttaaacaaactcacaaagaacaaacctaatttctaccaattttcccaatctcagt-cttgaacaagacactcaatgattttcac 41365041  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  41365042 tcacccaaggtgttt 41365056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 11137103 - 11137007
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||| ||||| |||||||| ||||||||||||||| ||||   | || ||||||||||| ||||| ||||||| ||||||||| || |||||||||||    
T  11137103 aaaacggttataagaaattagcttcaacaagttcttcaaggacatacttaatttctaccattttctcaatctc-ttccatgaaaaatagactcaatga 11137007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 125
Target Start/End: Original strand, 32902270 - 32902371
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactc 123  Q
    ||||||||||||| |||||||||   |||||| ||  |||| |||||||||||  |||  ||||||| |  ||||| |||||||||||||||||||||||    
T  32902270 gttacaagaaattagcttcaacagagtctccatgaacaaacataatttctacccatttatcaatctcctctcatgatcaagagactcaatgatttcactc 32902369  T
Q  124 ac 125  Q
    ||    
T  32902370 ac 32902371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 21 - 128
Target Start/End: Original strand, 7444911 - 7445019
Alignment:
Q  21 agggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    |||||||||| |||||| |||||||||| | |   |||  ||| ||||||||||||  |||| ||||||| | ||||||||||||||||||| || ||||    
T  7444911 agggttacaacaaatttacttcaacaagctatattagaacaaatctaatttctaccaatttctcaatctcttcccatgaacaagagactcaaagattttc 7445010  T
Q  120 actcaccaa 128  Q
    |||||||||    
T  7445011 actcaccaa 7445019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 7597692 - 7597592
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgat 116  Q
    |||||| ||| |||||||| ||||||||||| |||||||| ||||||||| |||| | |  |||| |||||||| | ||| |||||| ||||||||||||    
T  7597692 aaaaggattataagaaattagcttcaacaagctctccaagaacaaaacctgatttattctctttttccaatctcttcccaagaacaaaagactcaatgat 7597593  T
Q  117 t 117  Q
    |    
T  7597592 t 7597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 18141894 - 18141780
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||||||||| || | |||| | ||||||||||||| || ||||| ||||||||  | |||||||||| ||||||||| ||||    
T  18141894 gggttacaagaaattagcttcaacaagctcacaaaga-acaacctaatttctacccattttcacaatctca-ccaatgaacaagacactcaatgattttc 18141797  T
Q  120 actcaccaaaggtgttt 136  Q
    |||| || |||||||||    
T  18141796 actcgcccaaggtgttt 18141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 33352224 - 33352109
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| | |||||||||||| | ||||  || |||||||| || || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  33352224 gggttacaagaaattaggttcaacaagttcacaaagaacaaccctaatttttacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 33352126  T
Q  120 actcaccaaaggtgttt 136  Q
    | ||||| |||||||||    
T  33352125 aatcacccaaggtgttt 33352109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 118
Target Start/End: Original strand, 34256597 - 34256696
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||||||||||||||||||  |||  |||||||| | ||||  || ||||||||||||| |||| |||||||||  | |||||||||| |||||||||||    
T  34256597 aaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctaccatttttccaatctca-ccaatgaacaagacactcaatgatt 34256695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 1746308 - 1746420
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcc--caatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || ||||||||||||||||||    ||||||||  | |||||||||| |||||||||    
T  1746308 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacctttttttttcaatctcac-caatgaacaagacactcaatga 1746406  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  1746407 ttttcactcaccaa 1746420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 128
Target Start/End: Original strand, 19945455 - 19945562
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    |||||||||||||| ||||  |||||||| | ||||  || | |||||||||||  |||||||||||||||  | |||||||||| ||||||||| ||||    
T  19945455 ggttacaagaaattagctttgacaagttcacaaagaacaaccataatttctacccttttttcccaatctca-ccaatgaacaagacactcaatgattttc 19945553  T
Q  120 actcaccaa 128  Q
    |||||||||    
T  19945554 actcaccaa 19945562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 76
Target Start/End: Complemental strand, 4162569 - 4162517
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc 76  Q
    ||||||||||||| |||||||||||||||| ||||  |||||||| |||||||    
T  4162569 gttacaagaaattagcttcaacaagttctcaaagaacaaacctaacttctacc 4162517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 44303933 - 44303820
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc---tttttcccaatctcattccatgaacaagagactcaatg 114  Q
    |||||| |||||||||||| ||||  |||||||| | ||||  || | |||||||||||   |||||||||||||||  | |||||||||| ||||||||    
T  44303933 aaaaggattacaagaaattagctttgacaagttcacaaagaacaaccttaatttctaccctttttttcccaatctca-ccaatgaacaagacactcaatg 44303835  T
Q  115 a-tttcactcaccaa 128  Q
    | |||||||||||||    
T  44303834 attttcactcaccaa 44303820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 136
Target Start/End: Complemental strand, 4155129 - 4155055
Alignment:
Q  62 aacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgttt 136  Q
    |||||||||||||||| ||||| |||||| | || ||||||||||| | |||  |||||||||||| | ||||||    
T  4155129 aacctaatttctacctatttcctaatctcttcccgtgaacaagagattgaatattttcactcaccagaagtgttt 4155055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 24 - 135
Target Start/End: Original strand, 1292559 - 1292671
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| ||||||||||| || | ||||  |||| ||||||||| || ||||| ||||||||  | | |||||||| ||||||| | ||||||    
T  1292559 gttacaagaaattagcttcaacaagctcacaaagaacaaacttaatttctacccattttctcaatctca-ccaaagaacaagacactcaataattttcac 1292657  T
Q  122 tcaccaaaggtgtt 135  Q
    ||||| ||||||||    
T  1292658 tcacccaaggtgtt 1292671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 58 - 91
Target Start/End: Complemental strand, 25689992 - 25689959
Alignment:
Q  58 acaaaacctaatttctacctttttcccaatctca 91  Q
    ||||| ||||||||||||||||||||||||||||    
T  25689992 acaaaccctaatttctacctttttcccaatctca 25689959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 22 - 118
Target Start/End: Complemental strand, 40321154 - 40321058
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt 118  Q
    |||||||||||||||  |||||||||| || | | ||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||||||||||    
T  40321154 gggttacaagaaattaacttcaacaagctcacaatgaacaaccctaatttctacccattttcccaatctcac-ctatgaacaagacactcaatgattt 40321058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 40585710 - 40585677
Alignment:
Q  99 aacaagagactcaatgatttcactcaccaaaggt 132  Q
    |||||||||||||||||||||||||||| |||||    
T  40585710 aacaagagactcaatgatttcactcacctaaggt 40585677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 136
Target Start/End: Complemental strand, 5689301 - 5689230
Alignment:
Q  66 taatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcactcaccaaaggtgttt 136  Q
    |||||||||||  |||| |||||||||||  |||||||||| ||||||||| ||||||||||| |||||||||    
T  5689301 taatttctacccatttttccaatctcatta-atgaacaagacactcaatgattttcactcacccaaggtgttt 5689230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 89
Target Start/End: Complemental strand, 30143414 - 30143346
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatct 89  Q
    ||||||||||||||| ||||||||||| || | ||||  || ||||||||||| || ||||||||||||    
T  30143414 gggttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatct 30143346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 30909445 - 30909389
Alignment:
Q  19 aaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac 75  Q
    |||| ||||||||||||| | || |||||| |||||||||  |||||||||||||||    
T  30909445 aaagagttacaagaaattagtttaaacaagctctccaagagtaaacctaatttctac 30909389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 54; Significance: 3e-22; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 18 - 119
Target Start/End: Original strand, 30218135 - 30218236
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    |||| |||||||||||||| ||||||| ||| |||||||||  |||||||| |||||||  |||| ||||||| |||||||||||||| |||||||||||    
T  30218135 aaaatggttacaagaaattagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaagacactcaatgatt 30218234  T
Q  118 tc 119  Q
    ||    
T  30218235 tc 30218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 42261576 - 42261703
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaat---ctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||| ||||||||||| |||||||||  |||| ||||||||||  ||||| ||||   ||| || ||||||||||||||||||||    
T  42261576 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatg 42261675  T
Q  115 atttcactc-accaaaggtgtttcccaa 141  Q
    | ||||||| | | ||||||||||||||    
T  42261676 agttcactcgatccaaggtgtttcccaa 42261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 35446978 - 35447151
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| | ||||||||| || | ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||| |||||| |    
T  35446978 gggttacaagaaattagattcaacaagatcacaaagaacaaccctaatttctaccaattttaccaatctcac-caatgaacaagacactca-tgattttc 35447075  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  35447076 actctcccaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 35447151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 1631826 - 1631999
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||| ||| ||||||||||| || | ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||| |||||| |    
T  1631826 gggttacaagatattagcttcaacaagctcacaaagaacaatcctaatttctacccatttttccaatctcac-caatgaacaagacactca-tgattttc 1631923  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| |  ||||||||| | ||||||||  ||||||||||||||||||||| |||||||||||| || || ||||||    
T  1631924 actctctcaaggtgtttac-aattgtttcccaactctagaatctaacccccaaaagagaaccaacccttagcctttg 1631999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 24197974 - 24197873
Alignment:
Q  20 aagggttacaagaaatttgc-ttcaacaagttctccaagacaaaac-ctaatttctacctttttccc-aatctcattccatgaacaagagactcaatgat 116  Q
    ||||||||||||||||| || ||||||||||||||||||| |||||  ||||||||||| ||||||| |||||| | || ||| |||||||| |||||||    
T  24197974 aagggttacaagaaattagccttcaacaagttctccaagaaaaaactttaatttctacccttttcccaaatctcttcccgtgaccaagagacccaatgat 24197875  T
Q  117 tt 118  Q
    ||    
T  24197874 tt 24197873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 6595096 - 6595210
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| |||||||||||||| | ||||  || |||||||||||||  ||||||| |||||||  | |||||||||| || ||||||    
T  6595096 aaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttctaccattttttcctaatctca-ccaatgaacaagacacccaatga 6595194  T
Q  116 tt-tcactcaccaaag 130  Q
    || |||||| ||||||    
T  6595195 ttctcactctccaaag 6595210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 11151685 - 11151800
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| |||||| || | ||||  ||| |||||||||| || |||||||||| |||  | |||||||||||||||||||| ||||    
T  11151685 gggttacaagaaattagcttaaacaagctcacaaagaacaaatctaatttctacccattttcccaatttca-ccaatgaacaagagactcaatgattttc 11151783  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  11151784 actcacccaaggtgttt 11151800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 11690575 - 11690460
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| |||||| || | ||||  |||||||||||||| || ||||||||||||||    |||||||||| ||||||||| ||||    
T  11690575 gggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttc 11690477  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  11690476 actcacccaaggtgttt 11690460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 29867943 - 29867828
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| ||||  |||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  29867943 gggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 29867845  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  29867844 actcacccaaggtgttt 29867828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 36205754 - 36205865
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| ||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| |||||||||||||||  | |||||||||| |||||||||     
T  36205754 aaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccatttttcccaatctca-ccaatgaacaagacactcaatgat 36205852  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  36205853 tttcactcaccaa 36205865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 42362426 - 42362311
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||| |||||| || | ||||  |||||||||||||| || ||||||||||||||    |||||||||| ||||||||| ||||    
T  42362426 gggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttctacccattttcccaatctca-caaatgaacaagacactcaatgattttc 42362328  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  42362327 actcacccaaggtgttt 42362311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 5723346 - 5723456
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-t 116  Q
    |||| |||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| ||||| ||||||||  | |||||||||| ||||||||| |    
T  5723346 aaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcctaatttctacccttttctcaatctca-ccaatgaacaagacactcaatgatt 5723444  T
Q  117 ttcactcaccaa 128  Q
    ||||||||||||    
T  5723445 ttcactcaccaa 5723456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 136
Target Start/End: Complemental strand, 13121842 - 13121728
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga-tttca 120  Q
    ||||||||||||||  |||||||||| || | |||| |||| ||||||||||||| |||||||| |||||  | |||||||||| ||||||||| |||||    
T  13121842 ggttacaagaaattatcttcaacaagctcacaaagaacaaaccctaatttctaccattttcccagtctca-ccaatgaacaagacactcaatgattttca 13121744  T
Q  121 ctcaccaaaggtgttt 136  Q
    |||||| || ||||||    
T  13121743 ctcacccaatgtgttt 13121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 196
Target Start/End: Complemental strand, 45727002 - 45726830
Alignment:
Q  23 ggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-ca 120  Q
    |||||||||||||| ||||||||||| || | ||||  ||  ||||||||||||  ||||||||||||||  | ||||| |||| ||||| |||||| ||    
T  45727002 ggttacaagaaattagcttcaacaagctcacaaagaacaactctaatttctacccattttcccaatctcac-caatgaataagacactca-tgattttca 45726905  T
Q  121 ctcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    ||| || ||||||||| | ||||||||   ||| |||||||||||||||| |||||||||||| || || ||||||    
T  45726904 ctctcccaaggtgtttac-aattgtttcctaaccctagaatctaacccccaaaagagaaccaacccttagcctttg 45726830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 4503222 - 4503334
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||| ||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||| | | |||||||||| |||||||||    
T  4503222 aaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccattttttcccaatctc-tccaatgaacaagacactcaatga 4503320  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  4503321 ttttcactcaccaa 4503334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 134
Target Start/End: Complemental strand, 38312314 - 38312201
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| | |||||||||||| | ||||  || ||||||||||| || ||||||||||||||  | |||||||||| ||||||||| ||||    
T  38312314 gggttacaagaaattagtttcaacaagttcacaaagaacaaccctaatttctacccattttcccaatctca-ccaatgaacaagacactcaatgattttc 38312216  T
Q  120 actcaccaaaggtgt 134  Q
    ||||||  |||||||    
T  38312215 actcacacaaggtgt 38312201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 45099833 - 45099721
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||| ||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  | |||||||||| |||||||||    
T  45099833 aaaagagttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca-ccaatgaacaagacactcaatga 45099735  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  45099734 ttttcactcaccaa 45099721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 30833423 - 30833310
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    |||||||||||||||||||  |||  |||||||| | ||||  || |||||||||||||  ||| |||||||||||  ||| |||||||| |||||||||    
T  30833423 aaaagggttacaagaaattaactttgacaagttcacaaagaacaaccctaatttctacccttttctcccaatctca--ccaagaacaagacactcaatga 30833326  T
Q  116 ttt-cactcaccaaag 130  Q
    ||| ||||||||||||    
T  30833325 tttacactcaccaaag 30833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 2334508 - 2334619
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| ||||| ||||||| |||||||||||||| | ||||  || ||| ||||||| || ||||||||||||||  | |||||||||| |||||||||     
T  2334508 aaaagagttactagaaattagcttcaacaagttcacaaagaacaacccttatttctacccattttcccaatctca-ccaatgaacaagacactcaatgat 2334606  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  2334607 tttcactcaccaa 2334619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 136
Target Start/End: Original strand, 7815363 - 7815482
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaag-ttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| ||||||||||||| ||||||||||| ||||  |  ||||| ||||||||| ||||||||| ||||||||  | |||||||||| || ||||||     
T  7815363 aaaagagttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttcaacctttttctcaatctca-ccaatgaacaagacacgcaatgat 7815461  T
Q  116 tttcactcaccaaaggtgttt 136  Q
    |||||| |||| |||||||||    
T  7815462 tttcacccacctaaggtgttt 7815482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 16676219 - 16676152
Alignment:
Q  101 caagagactcaatgatttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaacccc 169  Q
    ||||||||||||||||||| || ||| ||||||||| ||||||||||   |||||||||||||||||||    
T  16676219 caagagactcaatgatttcgct-acccaaggtgttttccaattgtttccaaactctagaatctaacccc 16676152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 176
Target Start/End: Complemental strand, 33648249 - 33648089
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaag-acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    |||||||||||| |||||| ||||||||||| || | ||| ||||| |||||||| |||| ||||| ||||||| |  |||| |||||| ||||||| |     
T  33648249 aaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattttctcaatctcctctcatgtacaagacactcaattat 33648150  T
Q  116 tttcactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaaga 176  Q
    |||||||| || ||| |||||  |  || | |  ||||||||||||||||||||| |||||    
T  33648149 tttcactctcccaagatgttttacggttatgtcccaactctagaatctaacccccaaaaga 33648089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 4484421 - 4484532
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  ||| ||||||| |||  ||| |||||||| |||||||||    
T  4484421 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttctcccaatttca--ccaagaacaagacactcaatga 4484518  T
Q  116 ttt-cactcaccaa 128  Q
    ||| ||||||||||    
T  4484519 tttacactcaccaa 4484532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 58 - 124
Target Start/End: Complemental strand, 28671967 - 28671901
Alignment:
Q  58 acaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactca 124  Q
    ||||||||||||||||||  |||| ||||| || | ||| |||||||||||||||| ||||||||||    
T  28671967 acaaaacctaatttctacaatttttccaatatcttcccaagaacaagagactcaataatttcactca 28671901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 24 - 136
Target Start/End: Complemental strand, 36773634 - 36773521
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaattt-ctacctttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||||||||| ||||||||||| || | ||||  || ||||||||  | || ||||||||||||||  | |||||||||| ||||||||| ||||||    
T  36773634 gttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttattcccattttcccaatctca-ccaatgaacaagacactcaatgattttcac 36773536  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  36773535 tcacccaaggtgttt 36773521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 42261751 - 42261835
Alignment:
Q  61 aaacctaatttctacctttttcccaatctcattc---catgaacaagagactcaatgatttcactc-accaaaggtgtttcccaa 141  Q
    |||||||||||||||  ||||| ||||||| |||   ||||||||||||||||||||| ||||||| | | ||||||||||||||    
T  42261751 aaacctaatttctacgattttctcaatctccttctttcatgaacaagagactcaatgagttcactcgatccaaggtgtttcccaa 42261835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 196
Target Start/End: Complemental strand, 17450591 - 17450491
Alignment:
Q  96 atgaacaagagactcaatgattt-cactcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctt 194  Q
    |||||||||| |||||||||||| |||||||| ||||||||| | ||| ||||  ||||||||||||| ||||||| | |||||| ||| || || ||||    
T  17450591 atgaacaagacactcaatgattttcactcacccaaggtgtttgcaaat-gtttgccaactctagaatccaacccccaatagagaatcaacccttagcctt 17450493  T
Q  195 tg 196  Q
    ||    
T  17450492 tg 17450491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 36318103 - 36318218
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||| ||||| | ||||||||| || | ||||  || ||||||||||| || |||| |||||||||  | |||||||||| ||||||||| ||||    
T  36318103 gggttacaataaattagtttcaacaagctcacaaagaacaaccctaatttctacccatttttccaatctca-ccaatgaacaagacactcaatgattttc 36318201  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  36318202 actcacccaaggtgttt 36318218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 41446217 - 41446105
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    |||||||||||   ||||| ||||||||||| |||| ||||  |||| |||||||||||| |||| | |||||| |||| |||  ||||| ||||||||     
T  41446217 aaaagggttacttaaaattagcttcaacaagctctcaaagaacaaacataatttctacctttttttcgaatctctttccgtgattaagaggctcaatgat 41446118  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  41446117 tttcactcaccaa 41446105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Original strand, 42019963 - 42020071
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatt 117  Q
    ||||| ||||||||||||| ||||| ||||| | |  ||||  |||| ||| ||||||| |||| | |||||| | ||| ||| || |||||||||||||    
T  42019963 aaaagagttacaagaaattagcttctacaagctttataagaacaaacataaattctaccctttttctaatctcttcccaagaaaaatagactcaatgatt 42020062  T
Q  118 tcactcacc 126  Q
    |||||||||    
T  42020063 tcactcacc 42020071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 42288204 - 42288377
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||| ||||| ||||||||||| || | ||||  || | |||||||||||  ||||||||||||||  | ||| |||||| ||||  |||||| |    
T  42288204 gggttacaataaattagcttcaacaagctcacaaagaacaaccttaatttctacccattttcccaatctcac-caatgcacaagacactcg-tgattttc 42288301  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  |||||||||||||||| |||  |||||||||||| || || ||||||    
T  42288302 actctcccaaggtgtttac-aattgtttcccaactctagaatctaaacccgaaaagagaaccaacccttagcctttg 42288377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 17057465 - 17057578
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||| ||||| ||||||||||| |  | ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||||||| ||||||    
T  17057465 gttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattttcac 17057563  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  17057564 tcacccaaggtgttt 17057578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 17085448 - 17085561
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatga-tttcac 121  Q
    ||||||| ||||| ||||||||||| |  | ||||  || |||||||||||||  |||| |||||||||  | |||||||||| ||||||||| ||||||    
T  17085448 gttacaaaaaattagcttcaacaagcttgcaaagaacaaccctaatttctacccatttttccaatctcac-caatgaacaagacactcaatgattttcac 17085546  T
Q  122 tcaccaaaggtgttt 136  Q
    ||||| |||||||||    
T  17085547 tcacccaaggtgttt 17085561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 29989757 - 29989798
Alignment:
Q  95 catgaacaagagactcaatgatttcactcaccaaaggtgttt 136  Q
    ||||| ||||||||||||| |||||||||||||||| |||||    
T  29989757 catgatcaagagactcaataatttcactcaccaaagatgttt 29989798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 136
Target Start/End: Complemental strand, 36271745 - 36271624
Alignment:
Q  17 aaaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcatt-ccatgaacaagagactcaatga 115  Q
    |||||||||||||||| |||  |||||||||| | ||||| | |||||||||||| |||   |||| |||| |  || |||||||||||||||||  |||    
T  36271745 aaaaagggttacaagatattaacttcaacaagctttccaataaaaaacctaatttttactcatttctcaatttttttcccatgaacaagagactcgttga 36271646  T
Q  116 ttt-cactcaccaaaggtgttt 136  Q
    ||| ||||||||  ||||||||    
T  36271645 tttccactcacctgaggtgttt 36271624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 30 - 115
Target Start/End: Complemental strand, 41454300 - 41454215
Alignment:
Q  30 agaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||| ||||||||||| |||| || |  ||| |||||||||||| |||| | |||||  |||||||| ||||| |||||||||    
T  41454300 agaaattagcttcaacaagctctcaaaaaacaaatctaatttctaccatttttcgaatctttttccatgatcaagatactcaatga 41454215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 103
Target Start/End: Complemental strand, 35214308 - 35214236
Alignment:
Q  31 gaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaatctcattccatgaacaa 103  Q
    |||||| |||||| |||| |||||||||  ||||||||||| |||| || ||||| |||| | ||||||||||    
T  35214308 gaaattagcttcagcaagctctccaagagcaaacctaatttgtacccttatcccactctcttcccatgaacaa 35214236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 8e-20; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 490411 - 490538
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacctttttcccaat---ctcattccatgaacaagagactcaatg 114  Q
    ||||| ||||||||||||| ||||||||||| |||||||||  |||| ||||||||||  ||||| ||||   ||| || ||||||||||||||||||||    
T  490411 aaaagagttacaagaaattagcttcaacaagctctccaagaacaaacttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatg 490510  T
Q  115 atttcactc-accaaaggtgtttcccaa 141  Q
    | ||||||| | | ||||||||||||||    
T  490511 agttcactcgatccaaggtgtttcccaa 490538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 434611 - 434499
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||| ||||||||||  | |||||||||| |||||||||    
T  434611 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccctttttccccaatctca-ccaatgaacaagacactcaatga 434513  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  434512 ttttcactcaccaa 434499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 61 - 141
Target Start/End: Original strand, 490586 - 490670
Alignment:
Q  61 aaacctaatttctacctttttcccaatctcattc---catgaacaagagactcaatgatttcactc-accaaaggtgtttcccaa 141  Q
    |||||||||||||||  ||||| ||||||| |||   ||||||||||||||||||||| ||||||| | | ||||||||||||||    
T  490586 aaacctaatttctacgattttctcaatctccttctttcatgaacaagagactcaatgagttcactcgatccaaggtgtttcccaa 490670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 179
Target Start/End: Complemental strand, 11629 - 11476
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc-tttttcccaatctcattccatgaacaagagactcaatgattt-cac 121  Q
    ||||||||||||| ||||  |||||||| | ||||  || ||||||||||||| |||||||||||||||  | |||||||||| |||||||||||| |||    
T  11629 gttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctaccatttttcccaatctcac-caatgaacaagacactcaatgattttcac 11531  T
Q  122 tcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaa 179  Q
    ||||||| ||||||| | |  |||||  ||||||||||||||||||||  ||||||||    
T  11530 tcaccaa-ggtgtttacaa--tgtttcccaactctagaatctaaccccaaaaagagaa 11476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 136
Target Start/End: Original strand, 27539 - 27652
Alignment:
Q  24 gttacaagaaatttgcttcaacaagttctccaaga-caaaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcact 122  Q
    ||||||||||||| ||||||||||| ||| ||||| ||| || ||||||||||  ||||| ||||||| | ||  ||||||||||||||| |||||||||    
T  27539 gttacaagaaattagcttcaacaagctcttcaagaacaatacataatttctactcttttcacaatctcttccctagaacaagagactcaaagatttcact 27638  T
Q  123 caccaaaggtgttt 136  Q
    || | |||||||||    
T  27639 catccaaggtgttt 27652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 22 - 196
Target Start/End: Original strand, 80377 - 80550
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||| ||||||||| ||||||||||| || | ||||  || |||||||||||||  ||||||||||||||  | |||||||||| ||||| |||||| |    
T  80377 gggttgcaagaaattagcttcaacaagctcacaaagaacaaccctaatttctacccattttcccaatctcag-caatgaacaagacactca-tgattttc 80474  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || |||||||| | |||||||||   |||||||||||||||||||| ||| |||||||| || || ||||||    
T  80475 actctcccaaggtgtt-cacaattgtttcctaactctagaatctaacccccaaaatagaaccaacccttagcctttg 80550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 994 - 883
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| ||||  |||||||| | ||||  || |||||||||||||  |||||||||||||||  ||| |||||||| |||||||||    
T  994 aaaagggttacaagaaattagctttgacaagttcacaaagaacaaccctaatttctacccttttttcccaatctca--ccaagaacaagacactcaatga 897  T
Q  116 -tttcactcaccaa 128  Q
     |||||||||||||    
T  896 ttttcactcaccaa 883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 196
Target Start/End: Complemental strand, 7401 - 7229
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacct-ttttcccaatctcattccatgaacaagagactcaatgattt-c 119  Q
    ||||||||||||||| ||||||||||| || | ||||  || | |||||||||||  |||| |||||||||  | |||||||||| ||||| |||||| |    
T  7401 gggttacaagaaattagcttcaacaagctcacaaagaacaaccttaatttctacccatttttccaatctcac-caatgaacaagacactca-tgattttc 7304  T
Q  120 actcaccaaaggtgtttcccaattgtttttcaactctagaatctaaccccccaaagagaaccaatccatatcctttg 196  Q
    |||| || ||||||||| | ||||||||  || |||||||||||||||||| |||||||||||| || || ||||||    
T  7303 actctcccaaggtgtttac-aattgtttc-cagctctagaatctaacccccaaaagagaaccaacccttagcctttg 7229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 22 - 136
Target Start/End: Original strand, 20509 - 20624
Alignment:
Q  22 gggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctac-ctttttcccaatctcattccatgaacaagagactcaatga-tttc 119  Q
    ||||||||||||||| |||||||||||||| | || |  ||||||||||||| | | ||||||||||||||  | ||||| || | ||||||||| ||||    
T  20509 gggttacaagaaattagcttcaacaagttcacaaaaaacaaacctaatttctgctcattttcccaatctca-ccaatgaataataaactcaatgattttc 20607  T
Q  120 actcaccaaaggtgttt 136  Q
    ||||||| |||||||||    
T  20608 actcacccaaggtgttt 20624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 128
Target Start/End: Complemental strand, 114680 - 114569
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatga- 115  Q
    ||||| ||||||||||||| ||||  |||||||| | ||||  || | ||||||||| |||||||||||||||||  | |||||||||| |||||||||     
T  114680 aaaagcgttacaagaaattagctttgacaagttcacaaagaacaaccttaatttctaccctttttcccaatctca-ccaatgaacaagacactcaatgat 114582  T
Q  116 tttcactcaccaa 128  Q
    |||||||||||||    
T  114581 tttcactcaccaa 114569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 128
Target Start/End: Original strand, 11252 - 11363
Alignment:
Q  18 aaaagggttacaagaaatttgcttcaacaagttctccaagacaaaacctaatttctacc--tttttcccaatctcattccatgaacaagagactcaatga 115  Q
    ||||||||||||||||||| | ||  |||||||| | ||||  || |||||||||||||  ||| |||||||||||  ||| |||||||| |||||||||    
T  11252 aaaagggttacaagaaattagattttacaagttcacaaagaacaaccctaatttctacccttttctcccaatctca--ccaagaacaagacactcaatga 11349  T
Q  116 ttt-cactcaccaa 128  Q
    ||| ||||||||||    
T  11350 tttacactcaccaa 11363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 125
Target Start/End: Complemental strand, 11048 - 10986
Alignment:
Q  64 cctaatttcta-cctttttcccaatctcattccatgaacaagagactcaatgatttcactcac 125  Q
    ||||||||||| |||| |||| |||||| | |||||| ||| |||||||||||||||||||||    
T  11048 cctaatttctatccttattccaaatctcttcccatgatcaatagactcaatgatttcactcac 10986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University