View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3586_high_21 (Length: 251)
Name: NF3586_high_21
Description: NF3586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3586_high_21 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 14 - 251
Target Start/End: Complemental strand, 43673111 - 43672874
Alignment:
| Q |
14 |
atatcaaacagcagagttgaagatcttaataaagaaccctaatgaaatcaaaactgatgaagttaataataacattgtttctcatcaaatactatactaa |
113 |
Q |
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| T |
43673111 |
atatcaaacagcagagttgaagatcttaataaagaaccctaatgaaatcaaaactgatgaagttaataataacactgtttctcatcaaatactatactaa |
43673012 |
T |
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| Q |
114 |
agtctaaaccaccaaatatcgacacaacatctgtcatactcttttaagtttcttccctaccaaactcatatggactaaatagtgataaaaataaagagtg |
213 |
Q |
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| T |
43673011 |
agtctaaaccaccaaatatcgacacaacatctgtcatactcttttaagtttcttccctaccaaactcatatggactaaatagtgataaaaataaagagtg |
43672912 |
T |
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| Q |
214 |
aggaaggaatgaaggaccatatattatgaaaccaagtc |
251 |
Q |
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| T |
43672911 |
aggaaggaatgaaggaccatatattatgaaaccaagtc |
43672874 |
T |
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