View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3586_low_6 (Length: 431)
Name: NF3586_low_6
Description: NF3586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3586_low_6 |
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Alignment Details
Target: chr8 (Bit Score: 398; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 398; E-Value: 0
Query Start/End: Original strand, 1 - 414
Target Start/End: Complemental strand, 45549507 - 45549094
Alignment:
| Q |
1 |
ataatataaatctaacagttacatgatatgtctttcacgaactaaaatatataaccctttgttgttgaacttaattttatttatagcaataccaagctgt |
100 |
Q |
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| T |
45549507 |
ataatataaatctaacagttacatgatatgtctttcacgaactaaaatatataaccctttgttgttgaacttaatttgatttatagcaataccaagctgt |
45549408 |
T |
|
| Q |
101 |
gcaaccgataggaaccaatttgcaagatcaagctgttcctgaggcagcacatgagggattcaagaccagtgaagttgcataccataaaagaaaaacaatt |
200 |
Q |
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| T |
45549407 |
gcaaccgataggaaccaatttgcaagatcaagctgttcctgaggcagcacatgagggattcaagaccagtgaagttgcataccataaaagaaaaacaatt |
45549308 |
T |
|
| Q |
201 |
ggtgagtataactaactaaacatggatgaatggaaacaacttgagttctagattttacctagtttgtttaatatcacaggagttcaggaaaacagaatgg |
300 |
Q |
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| T |
45549307 |
ggtgagtataactaactaaacatggatgaatggaaacaacttgagttctagattttacctagtttgtttaatatcacaggagttcaggaaggcagaatgg |
45549208 |
T |
|
| Q |
301 |
gtgtgaaacaacaaaatcaaaagatgagcatccaacaaccactaacagaaagtgaaaaccacctcaagtggattttggtcacgagtcaattattcgtcaa |
400 |
Q |
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| T |
45549207 |
gtgtgaaacaacaaaatcaaaatatgagcatccaacaaccactaacagaaagtgaaaaccacctcaagtggattttggtcacgagtcaattattcgtcaa |
45549108 |
T |
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| Q |
401 |
cactgcagaagcac |
414 |
Q |
| |
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| T |
45549107 |
cactgcagaagcac |
45549094 |
T |
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