View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3593_high_26 (Length: 316)

Name: NF3593_high_26
Description: NF3593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3593_high_26
NF3593_high_26
[»] chr4 (25 HSPs)
chr4 (29-143)||(45049561-45049673)
chr4 (229-301)||(45049756-45049828)
chr4 (234-299)||(19849136-19849201)
chr4 (1-44)||(45049500-45049543)
chr4 (234-299)||(6510170-6510235)
chr4 (242-299)||(29289926-29289983)
chr4 (234-299)||(30022120-30022185)
chr4 (234-299)||(54092010-54092075)
chr4 (234-299)||(24259663-24259730)
chr4 (229-299)||(30492775-30492846)
chr4 (236-299)||(44855298-44855361)
chr4 (235-299)||(45889616-45889682)
chr4 (259-301)||(15501187-15501229)
chr4 (234-299)||(31987356-31987421)
chr4 (234-299)||(34096068-34096133)
chr4 (234-299)||(37445712-37445777)
chr4 (234-298)||(22212393-22212457)
chr4 (234-297)||(35928543-35928604)
chr4 (234-301)||(34124347-34124416)
chr4 (254-299)||(34360077-34360122)
chr4 (234-299)||(45520493-45520558)
chr4 (234-299)||(17499750-17499817)
chr4 (234-299)||(19282442-19282509)
chr4 (234-299)||(31941610-31941677)
chr4 (259-299)||(39671141-39671181)
[»] chr3 (25 HSPs)
chr3 (234-297)||(38457516-38457579)
chr3 (229-299)||(4391955-4392025)
chr3 (234-301)||(46363040-46363107)
chr3 (229-299)||(3000804-3000874)
chr3 (229-299)||(35099398-35099468)
chr3 (234-299)||(54933235-54933302)
chr3 (234-299)||(83351-83416)
chr3 (234-299)||(647624-647689)
chr3 (234-299)||(27027789-27027854)
chr3 (234-299)||(37225627-37225692)
chr3 (254-299)||(43599862-43599907)
chr3 (237-301)||(44854373-44854438)
chr3 (235-299)||(25722491-25722557)
chr3 (229-299)||(15514757-15514827)
chr3 (234-301)||(20512524-20512593)
chr3 (234-299)||(43580532-43580598)
chr3 (234-297)||(44645394-44645459)
chr3 (234-301)||(54261471-54261540)
chr3 (254-299)||(1340961-1341006)
chr3 (234-299)||(5244641-5244706)
chr3 (254-299)||(36771608-36771653)
chr3 (234-299)||(2988640-2988707)
chr3 (234-299)||(36541547-36541614)
chr3 (234-278)||(43600245-43600288)
chr3 (234-299)||(43687913-43687980)
[»] chr6 (11 HSPs)
chr6 (234-299)||(4123888-4123952)
chr6 (234-299)||(31275673-31275738)
chr6 (234-299)||(12828713-12828778)
chr6 (234-299)||(29915597-29915662)
chr6 (234-299)||(30627146-30627211)
chr6 (234-299)||(17345166-17345233)
chr6 (234-299)||(26189563-26189630)
chr6 (252-290)||(4131986-4132024)
chr6 (237-299)||(8052402-8052464)
chr6 (234-299)||(29927263-29927328)
chr6 (234-299)||(34576599-34576666)
[»] chr7 (14 HSPs)
chr7 (229-299)||(5723053-5723123)
chr7 (229-299)||(40298898-40298968)
chr7 (234-299)||(34002165-34002230)
chr7 (229-299)||(33845442-33845512)
chr7 (234-299)||(19906470-19906535)
chr7 (234-303)||(42044006-42044077)
chr7 (234-301)||(17869293-17869360)
chr7 (234-301)||(32345864-32345933)
chr7 (234-299)||(1103540-1103605)
chr7 (234-293)||(19920310-19920369)
chr7 (254-299)||(22627386-22627431)
chr7 (234-299)||(42259581-42259646)
chr7 (259-299)||(18886726-18886766)
chr7 (234-299)||(26963535-26963602)
[»] chr5 (16 HSPs)
chr5 (234-299)||(166681-166746)
chr5 (229-299)||(38982177-38982247)
chr5 (234-299)||(4742298-4742363)
chr5 (234-299)||(4751562-4751627)
chr5 (234-299)||(4833663-4833730)
chr5 (229-287)||(4371414-4371472)
chr5 (234-299)||(34171219-34171284)
chr5 (234-299)||(39059861-39059926)
chr5 (234-299)||(29653544-29653611)
chr5 (234-299)||(33585005-33585072)
chr5 (234-292)||(13066769-13066827)
chr5 (229-299)||(28640133-28640203)
chr5 (234-299)||(36783411-36783476)
chr5 (234-299)||(27652351-27652418)
chr5 (234-299)||(33822533-33822600)
chr5 (234-299)||(42329576-42329643)
[»] chr1 (21 HSPs)
chr1 (234-299)||(672313-672378)
chr1 (237-299)||(17806407-17806469)
chr1 (234-299)||(11650113-11650178)
chr1 (234-299)||(254943-255010)
chr1 (236-299)||(12002303-12002366)
chr1 (229-299)||(12851791-12851861)
chr1 (229-299)||(45377182-45377252)
chr1 (234-299)||(1428921-1428986)
chr1 (234-299)||(5317610-5317674)
chr1 (234-299)||(17919852-17919917)
chr1 (234-299)||(28751440-28751505)
chr1 (242-299)||(50349895-50349952)
chr1 (234-299)||(44582810-44582877)
chr1 (235-299)||(44583828-44583892)
chr1 (234-299)||(22664994-22665057)
chr1 (234-301)||(28200252-28200321)
chr1 (261-299)||(42650281-42650319)
chr1 (259-297)||(48259897-48259935)
chr1 (259-299)||(24041056-24041096)
chr1 (234-299)||(26252173-26252240)
chr1 (259-299)||(43105634-43105674)
[»] chr2 (11 HSPs)
chr2 (234-297)||(37106917-37106980)
chr2 (234-299)||(7743456-7743521)
chr2 (234-299)||(2459828-2459895)
chr2 (234-301)||(43388687-43388754)
chr2 (237-299)||(1360235-1360297)
chr2 (237-299)||(24775247-24775309)
chr2 (234-297)||(33093423-33093488)
chr2 (234-299)||(4840759-4840824)
chr2 (234-299)||(775916-775983)
chr2 (259-299)||(34225830-34225870)
chr2 (261-301)||(45148007-45148047)
[»] chr8 (16 HSPs)
chr8 (234-299)||(9022450-9022516)
chr8 (229-299)||(32661355-32661425)
chr8 (234-299)||(7612553-7612618)
chr8 (234-299)||(8382510-8382575)
chr8 (234-299)||(27109853-27109918)
chr8 (229-299)||(3095536-3095606)
chr8 (234-299)||(11257595-11257660)
chr8 (234-299)||(22601190-22601255)
chr8 (234-299)||(34461614-34461681)
chr8 (234-301)||(5044257-5044324)
chr8 (234-301)||(18673128-18673197)
chr8 (237-299)||(32326757-32326819)
chr8 (237-287)||(42946180-42946230)
chr8 (234-299)||(14541778-14541843)
chr8 (244-297)||(43938186-43938239)
chr8 (259-299)||(26439046-26439086)
[»] scaffold0238 (1 HSPs)
scaffold0238 (234-299)||(16071-16136)
[»] scaffold0003 (1 HSPs)
scaffold0003 (234-299)||(321781-321848)
[»] scaffold0047 (1 HSPs)
scaffold0047 (234-301)||(70483-70552)
[»] scaffold0519 (1 HSPs)
scaffold0519 (234-299)||(7732-7797)
[»] scaffold0007 (1 HSPs)
scaffold0007 (234-299)||(158155-158220)
[»] scaffold0886 (1 HSPs)
scaffold0886 (234-299)||(4141-4206)
[»] scaffold0072 (1 HSPs)
scaffold0072 (259-299)||(12113-12153)


Alignment Details
Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 29 - 143
Target Start/End: Original strand, 45049561 - 45049673
Alignment:
Q  29 aaacaaattaaagtttaaaaatgtatgttctccaattcttcgtaaataaatnnnnnnnntagtagtacgtctagaacattcttgtaaaagttaaccaccc 128  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||        |||||| ||| ||| ||||||||||||||||| ||||||||    
T  45049561 aaacaaattaaagtttaaaaatgtatgttctgcaattcttcgtaaataaat-aaaaaaatagtagcacgcctaaaacattcttgtaaaagtcaaccaccc 45049659  T
Q  129 aaaaaagtacttcct 143  Q
     ||||||||||||||    
T  45049660 -aaaaagtacttcct 45049673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 229 - 301
Target Start/End: Original strand, 45049756 - 45049828
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||    
T  45049756 ctccgaactttactctcaataagtactcctacttttctttcgcacaattttcaatgcaactttaagtttgtat 45049828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 19849136 - 19849201
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||| ||||||| |||||||||||    
T  19849136 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaagtttgt 19849201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 45049500 - 45049543
Alignment:
Q  1 attgcgccacaagtgtgtcatagagtataaacaaattaaagttt 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45049500 attgcgccacaagtgtgtcatagagtataaacaaattaaagttt 45049543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 6510170 - 6510235
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| ||||||  ||||||| | ||||||||||||||| ||||||||||||||    
T  6510170 aactttaccctcaataaatactccaccttttctcttacacaatttttaatgtaattttaagtttgt 6510235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 29289983 - 29289926
Alignment:
Q  242 cctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||| |||| | |||||||| |||||||||||| |||||||||||||||||||    
T  29289983 cctcaataaatacttcaacttttctctcacacaattttcaatgcaattttaagtttgt 29289926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 30022120 - 30022185
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||| | |||||||| |||||||||||| ||||||| ||| |||||||    
T  30022120 aactttaccctcaataaatacttcaacttttctctcacacaattttcaatgcaactttgagtttgt 30022185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 54092010 - 54092075
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||| || || |||||| ||| |||||||||||||||    
T  54092010 aactttaccctcaataaatactccaacttttctctcgcataattttcaatacaattttaagtttgt 54092075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 24259663 - 24259730
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||||||| |||||||||||    
T  24259663 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 24259730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 30492775 - 30492846
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaa-tttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||| |||||||| |  ||||| |||||||||||| |||||||||||    
T  30492775 ctcccaactttaccctcaataaatactccaacttttctcttgcacaattttttaatgcaactttaagtttgt 30492846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 44855298 - 44855361
Alignment:
Q  236 ctttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||| || ||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  44855298 ctttaccctcaataaataatccaacttttctctcacacaattttcaatgcaactttaattttgt 44855361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 45889616 - 45889682
Alignment:
Q  235 actttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||||||||| |||||| |||||  ||| |||||||||||| ||||||| |||||||||||    
T  45889616 actttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 45889682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 301
Target Start/End: Complemental strand, 15501229 - 15501187
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  15501229 acttttctctcacacaatttttaatgcaactttaagtttgtat 15501187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 31987356 - 31987421
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||| || || |||||| ||||||| ||||| |||||    
T  31987356 aactttaccctcaataaatactccaacttttctctcgcataattttcaatgcaactttaaatttgt 31987421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 34096068 - 34096133
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||  |||||||| |||||||||||| |||| || |||||||||||    
T  34096068 aactttaccctcaataaatattcaaacttttctctcacacaattttcaatgaaactttaagtttgt 34096133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 37445712 - 37445777
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||  | |||||||||||| |||||||||||||| ||||| |||||    
T  37445712 aactttaccctcaataaatattcaaatttttctttcacataatttttaatgcaactttaaatttgt 37445777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 22212393 - 22212457
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttg 298  Q
    ||||||||||||||||| |||||| || ||| | |||||||||||| ||| ||| ||||||||||    
T  22212393 aactttaccctcaataaatactccaacatttttctcacacaattttcaatacaactttaagtttg 22212457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 35928543 - 35928604
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagttt 297  Q
    ||||||||||||||||| |||| | || |||||||  ||||||||| |||||||||||||||||    
T  35928543 aactttaccctcaataaatactgcaacgtttcttt--cacaattttcaatgcaattttaagttt 35928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 34124347 - 34124416
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||  |||||||| ||  |||||||||| ||| ||| |||||||||||||    
T  34124347 aactttaccctcaataaatactcaaacttttctctctcacacaattttcaatacaactttaagtttgtat 34124416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Original strand, 34360077 - 34360122
Alignment:
Q  254 ctcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||||    
T  34360077 ctccaacttttctctcacacaattttcaatgcaactttaagtttgt 34360122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 45520558 - 45520493
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| |||  |||| |||||  |||||||| ||| |||||||||||||||| |||||||||||    
T  45520558 aactttatccttgataaatactcaaacttttctctcatacaatttttaatgcaactttaagtttgt 45520493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 17499817 - 17499750
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||  ||| ||| |||||||| ||||||| |||||||||||    
T  17499817 aactttaccctcaataaatactcaaacttttctctctcatacaattttcaatgcaactttaagtttgt 17499750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 19282509 - 19282442
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||| ||||||| |||||  |||||||| ||  ||||||||| |||| |||||||||||||||    
T  19282509 aactttaccttcaataaatactctaacttttctctctcacacaatttctaatacaattttaagtttgt 19282442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 31941610 - 31941677
Alignment:
Q  234 aactttaccctcaataagtactcctac--ttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| ||  || ||| ||||| |||||| ||||||| |||||||||||    
T  31941610 aactttaccctcaataaatactccaactattctctctcacataattttcaatgcaactttaagtttgt 31941677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 39671181 - 39671141
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  39671181 acttttctctcacacaattttcaatgcaactttaagtttgt 39671141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 38457516 - 38457579
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagttt 297  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||| |||||||||||||||||    
T  38457516 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaattttaagttt 38457579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 4391955 - 4392025
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||| |||||||| || ||||||||| ||||||| |||||||||||    
T  4391955 ctcccaactttaccctcaataaatactccaacttttctctcgcacaattttcaatgcaactttaagtttgt 4392025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 46363107 - 46363040
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||  ||||||| ||||| |||||||    
T  46363107 aactttaccctcaataaatactccaacttttctctcacacaatttacaatgcaactttaaatttgtat 46363040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 3000804 - 3000874
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| |||| |||||||||||| |||||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  3000804 ctcccaactctaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaaatttgt 3000874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 35099468 - 35099398
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||| ||||| |||||  |||||||| || ||||||||| |||||||||||||||||||    
T  35099468 ctcccaactttacccttaataaatactcaaacttttctctcgcacaattttcaatgcaattttaagtttgt 35099398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 54933302 - 54933235
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||||||| |||||||||||    
T  54933302 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 54933235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 83351 - 83416
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||| ||| |||||  |||||||| |||| ||||||| ||||||| |||||||||||    
T  83351 aactttaccctcattaaatactctaacttttctctcacgcaattttcaatgcaactttaagtttgt 83416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 647689 - 647624
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| | ||| |||||| ||||||| |||||||||||    
T  647689 aactttaccctcaataaatactctaacttttctcttacagaattttcaatgcaactttaagtttgt 647624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 27027789 - 27027854
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| ||| ||||| |||||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  27027789 aactttatccttaataaatactccaacttttctctcacacaattttcaatgcaactttaaatttgt 27027854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 37225692 - 37225627
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| ||| |  |||||||| |||||||||||| ||||||| ||||| |||||    
T  37225692 aactttaccctcaataaatacgctaacttttctctcacacaattttcaatgcaactttaattttgt 37225627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 43599907 - 43599862
Alignment:
Q  254 ctcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||    
T  43599907 ctccaacttttctctcacacaatttttaatgcaactttaagtttgt 43599862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 237 - 301
Target Start/End: Original strand, 44854373 - 44854438
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttca-cacaatttttaatgcaattttaagtttgtat 301  Q
    |||||||||||||| |||||| |||||||| |||  |||||||| ||||||| |||||||||||||    
T  44854373 tttaccctcaataaatactccaacttttctctcagtacaattttcaatgcaactttaagtttgtat 44854438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 235 - 299
Target Start/End: Complemental strand, 25722557 - 25722491
Alignment:
Q  235 actttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||| ||||| |||||| |||||||| ||  |||||||||| ||||||| |||||||||||    
T  25722557 actttaccctaaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 25722491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 15514827 - 15514757
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||| ||||||  |||||| |||||||| || || |||||| ||||||| |||||||||||    
T  15514827 ctcccaactttaccttcaatagatactccaacttttctctcgcataattttcaatgcaactttaagtttgt 15514757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 20512593 - 20512524
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||| ||||||| |||||| |||||||| ||  |||||||||| ||| ||| |||||||||||||    
T  20512593 aactttaccttcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttgtat 20512524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 43580532 - 43580598
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctt-tcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||| ||||| |||||| |||||| || |||||||||||| ||||||| ||||| |||||    
T  43580532 aactttacccttaataaatactccaactttttttctcacacaattttcaatgcaactttaaatttgt 43580598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 44645394 - 44645459
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagttt 297  Q
    ||||||||||||||||| |||||| |||||||| ||  ||| |||||| ||||||| |||||||||    
T  44645394 aactttaccctcaataaatactccaacttttctctcttacataattttcaatgcaactttaagttt 44645459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 54261471 - 54261540
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||  |||||||| ||  |||||||||| ||| ||| |||||||||||||    
T  54261471 aactttaccctcaataaatactctaacttttctctctcacacaattttcaatacaactttaagtttgtat 54261540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 1341006 - 1340961
Alignment:
Q  254 ctcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||||    
T  1341006 ctccaacttttctctcacacaattttcaatgcaactttaagtttgt 1340961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 5244641 - 5244706
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  | |||||| |||||  ||||| ||||||| |||||||||||    
T  5244641 aactttaccctcaataaatactctaatttttctctcacattattttcaatgcaactttaagtttgt 5244706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 36771653 - 36771608
Alignment:
Q  254 ctcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||||    
T  36771653 ctccaacttttctctcacacaattttcaatgcaactttaagtttgt 36771608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 2988707 - 2988640
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcac--acaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| || |  |||||||| ||||||| |||||||||||    
T  2988707 aactttaccctcaataaatactcaaacttttctctctcgcacaattttcaatgcaactttaagtttgt 2988640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 36541547 - 36541614
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||| |||||  ||| ||||||||||||  |||||| |||||||||||    
T  36541547 aactttaccctcaataaatattccaacttttctctctcacacaattttcgatgcaactttaagtttgt 36541614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 278
Target Start/End: Complemental strand, 43600288 - 43600245
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaattt 278  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||    
T  43600288 aactttaccctcaataaatact-ctacttttctctcacacaattt 43600245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 43687980 - 43687913
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| |||| || ||||| |||||    
T  43687980 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatgaaactttaaatttgt 43687913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 4123952 - 4123888
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  4123952 aactttaccctcaataaatactccaacttttctttcacacaattttcaatgcaa-tttaagtttgt 4123888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 31275738 - 31275673
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||| | |||||||||||| ||||||| |||||||||||    
T  31275738 aactttaccctcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgt 31275673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 12828778 - 12828713
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||| | |||||||| |||||||||||| ||||||| |||||| ||||    
T  12828778 aactttaccctcaataaatacttcaacttttctctcacacaattttcaatgcaactttaagcttgt 12828713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 29915597 - 29915662
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||  ||||||| |||| ||||||    
T  29915597 aactttaccctcaataaatactccaacttttctctcacacaatttccaatgcaactttatgtttgt 29915662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 30627146 - 30627211
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| ||| |||||||| ||||||| ||||| |||||    
T  30627146 aactttaccctcaataaatactcaaacttttctctcaaacaattttcaatgcaactttaaatttgt 30627211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 17345233 - 17345166
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||||||| || ||||||||    
T  17345233 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaacttgaagtttgt 17345166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 26189563 - 26189630
Alignment:
Q  234 aactttaccctcaataagtactcctacttttcttt--cacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| | |||||| |  ||||||||||| ||||||| |||||||||||    
T  26189563 aactttaccctcaataaatactccaatttttctctcacacacaattttcaatgcaactttaagtttgt 26189630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 290
Target Start/End: Complemental strand, 4132024 - 4131986
Alignment:
Q  252 tactcctacttttctttcacacaatttttaatgcaattt 290  Q
    |||||| ||||||||||||||||||||| ||||||||||    
T  4132024 tactccaacttttctttcacacaattttcaatgcaattt 4131986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 8052402 - 8052464
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||||||| |||||| ||| |||| || ||||||||| ||||||| |||| ||||||    
T  8052402 tttaccctcaataaatactccaactattctctcccacaattttcaatgcaactttaggtttgt 8052464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 29927263 - 29927328
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||| |||   | |||| ||||||| |||||||||||    
T  29927263 aactttaccctcaataaatactccaacttttctctcatgtagttttcaatgcaactttaagtttgt 29927328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 34576599 - 34576666
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| ||||||||| |||| | |||||||| ||  |||||||||| ||||||| |||||||||||    
T  34576599 aactttatcctcaataaatacttcaacttttctctctcacacaattttcaatgcaactttaagtttgt 34576666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 5723053 - 5723123
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||  |||||||| |||||||||||| ||||||| |||||||||||    
T  5723053 ctcctaactttaccctcaataaatactcaaacttttctctcacacaattttcaatgcaactttaagtttgt 5723123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 40298898 - 40298968
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||| |||||||| |||||||||||| |||| || |||||||||||    
T  40298898 ctcccaactttaccctcaataaatactccaacttttctctcacacaattttcaatgtaactttaagtttgt 40298968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 34002230 - 34002165
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  34002230 aactttaccctcaataaatactccaacttttctctcacacaattttcaatgcaactttaattttgt 34002165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 33845512 - 33845442
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||| |||||| | || ||||||||| ||||||| |||||||||||    
T  33845512 ctcccaactttaccctcaataattactccaacttttttctcgcacaattttcaatgcaactttaagtttgt 33845442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 19906470 - 19906535
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||| |||||||| || ||||||||| ||||||| |||||||||||    
T  19906470 aactttaccctcaataaatattccaacttttctctctcacaattttcaatgcaactttaagtttgt 19906535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 303
Target Start/End: Complemental strand, 42044077 - 42044006
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgtatat 303  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||||||| |||||| ||||||||    
T  42044077 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagattgtatat 42044006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Original strand, 17869293 - 17869360
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||| ||||||||| |||||   ||||||| |||||||||||| ||||||| |||||||||||||    
T  17869293 aactttatcctcaataaatactcaatcttttctctcacacaattttcaatgcaactttaagtttgtat 17869360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 32345933 - 32345864
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||| ||| |||||||||||||    
T  32345933 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttgtat 32345864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 1103540 - 1103605
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||| | |||||||| |||||||||||| |||| || ||||| |||||    
T  1103540 aactttaccctcaataaatacttcaacttttctctcacacaattttcaatgtaactttaaatttgt 1103605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 19920369 - 19920310
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaa 293  Q
    ||||||||||||||||| |||||  |||||||| || ||||||||| ||||||| |||||    
T  19920369 aactttaccctcaataaatactcaaacttttctctcgcacaattttcaatgcaactttaa 19920310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 299
Target Start/End: Complemental strand, 22627431 - 22627386
Alignment:
Q  254 ctcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||||    
T  22627431 ctccaacttttctctcacacaattttcaatgcaactttaagtttgt 22627386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 42259646 - 42259581
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||| | ||||| |||||| ||||||| |||||| ||||    
T  42259646 aactttaccctcaataaatactcaaacttttgtctcacataattttcaatgcaactttaagcttgt 42259581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 18886726 - 18886766
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||||||| ||||||| ||||| |||||    
T  18886726 acttttctttcacacaattttcaatgcaactttaattttgt 18886766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 26963535 - 26963602
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||| | |||||| |||||  ||| ||||| |||||| ||||||| |||||||||||    
T  26963535 aactttaccctcaatgaatactccaacttttctctctcacataattttcaatgcaactttaagtttgt 26963602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 166746 - 166681
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||| | |||||||||||| ||||||| |||||||||||    
T  166746 aactttaccctcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgt 166681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 38982247 - 38982177
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||  |||||||| || ||||||||| ||||||| |||||||||||    
T  38982247 ctcccaactttaccctcaataaatactcaaacttttctctcgcacaattttcaatgcaactttaagtttgt 38982177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 4742363 - 4742298
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||| | |||||||||||| ||| ||| |||||||||||    
T  4742363 aactttaccctcaataaatactccaacttttttctcacacaattttcaattcaactttaagtttgt 4742298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 4751627 - 4751562
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||| | |||||||||||| ||| ||| |||||||||||    
T  4751627 aactttaccctcaataaatactccaacttttttctcacacaattttcaattcaactttaagtttgt 4751562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 4833730 - 4833663
Alignment:
Q  234 aactttaccctcaataagtactcctacttttct--ttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  ||||||||  ||||||||||||| ||||||| |||||||||||    
T  4833730 aactttaccctcaataaatactcaaacttttctctttcacacaattttcaatgcaactttaagtttgt 4833663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 287
Target Start/End: Original strand, 4371414 - 4371472
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaa 287  Q
    |||| ||||||||||||||||| |||||  |||||||| |||||||||||| |||||||    
T  4371414 ctccaaactttaccctcaataaatactcaaacttttctctcacacaattttcaatgcaa 4371472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 34171219 - 34171284
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||| ||||||| |||||  |||||||| ||||| |||||| ||||||| |||||||||||    
T  34171219 aactttaccttcaataaatactcaaacttttctctcacagaattttcaatgcaactttaagtttgt 34171284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 39059861 - 39059926
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| | |||| | ||| |||||||| ||||||| |||||||||||    
T  39059861 aactttaccctcaataaatactccaaattttttctcatacaattttcaatgcaactttaagtttgt 39059926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 29653611 - 29653544
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| ||  ||||||||| |||||||| |||||||||||    
T  29653611 aactttaccctcaataaatactctaacttttctctctcacacaatttctaatgcaactttaagtttgt 29653544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 33585072 - 33585005
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||| ||||||| |||||| |||||||| ||  |||||||||| ||||||| |||||||||||    
T  33585072 aactttaccttcaataaatactccaacttttctgtctcacacaattttcaatgcaactttaagtttgt 33585005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Original strand, 13066769 - 13066827
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaatttta 292  Q
    ||||||||||||||||| |||||| |||||||| |  ||||||||| ||||||| ||||    
T  13066769 aactttaccctcaataaatactccaacttttctcttgcacaattttcaatgcaacttta 13066827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 28640133 - 28640203
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||| | |||||||| ||  |||||||| ||| ||| |||||||||||    
T  28640133 ctcccaactttaccctcaataaatacttcaacttttctctcgaacaattttcaatacaactttaagtttgt 28640203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 36783411 - 36783476
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||| | ||| | |||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  36783411 aactttacccttagtaaattctccaacttttctctcacacaattttcaatgcaactttaaatttgt 36783476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 27652418 - 27652351
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||| |||||  ||| |||||||||||| ||||||| ||||| |||||    
T  27652418 aactttaccctcaataaataatccaacttttctctctcacacaattttcaatgcaactttaaatttgt 27652351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 33822600 - 33822533
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||| ||||||| |||| | |||||||| ||  |||||||||| ||||||| |||||||||||    
T  33822600 aactttaccttcaataaatacttcaacttttctctctcacacaattttcaatgcaactttaagtttgt 33822533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 42329643 - 42329576
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||| ||||| |||| | |||||||| ||  |||||||||| ||||||| |||||||||||    
T  42329643 aactttacccttaataaatacttcaacttttctctctcacacaattttcaatgcaactttaagtttgt 42329576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 672378 - 672313
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| |||||||||||| ||||||| |||||||||||    
T  672378 aactttaccctcaataaatactctaacttttctctcacacaattttcaatgcaaatttaagtttgt 672313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 17806469 - 17806407
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||| ||||||| |||||| |||||||| ||| |||||||| |||||||||||||||||||    
T  17806469 tttaccttcaataaatactccaacttttctctcatacaattttcaatgcaattttaagtttgt 17806407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 11650113 - 11650178
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| | |||||| |||||||||||  ||||||| |||||||||||    
T  11650113 aactttaccctcaataaatactccaatttttctctcacacaatttccaatgcaactttaagtttgt 11650178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 255010 - 254943
Alignment:
Q  234 aactttaccctcaataagtactcctacttttct--ttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| ||||||||   |||||||||||| ||||||| |||||||||||    
T  255010 aactttaccctcaataaatactccaacttttctcactcacacaattttcaatgcaactttaagtttgt 254943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 236 - 299
Target Start/End: Original strand, 12002303 - 12002366
Alignment:
Q  236 ctttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| ||||||| |||||| |||||| | |||||||||||| ||||||| |||||||||||    
T  12002303 ctttaccttcaataaatactccaacttttttctcacacaattttcaatgcaactttaagtttgt 12002366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 12851791 - 12851861
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||  |||||  ||||||| |||| |||||||||||||||| ||||| |||||    
T  12851791 ctcccaactttaccctcaatatatactcaaacttttcattcatacaatttttaatgcaactttaattttgt 12851861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 45377252 - 45377182
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||  |||||| |||||||| || ||||||||| |||| || |||||||||||    
T  45377252 ctcccaactttaccctcaatagatactccaacttttctctcgcacaattttcaatgaaactttaagtttgt 45377182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 1428921 - 1428986
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| |||||||||||  ||| ||| |||||||||||    
T  1428921 aactttaccctcaataaatactcaaacttttctctcacacaatttccaattcaactttaagtttgt 1428986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 5317674 - 5317610
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||| | |||||||| || ||||||||| ||||||| |||||||||||    
T  5317674 aactttaccctcaataaatactacaacttttctctc-cacaattttcaatgcaactttaagtttgt 5317610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 17919917 - 17919852
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||  |||||  |||||| | |||||||||||| ||||||| |||||||||||    
T  17919917 aactttaccctcaatatatactctaacttttttctcacacaattttcaatgcaactttaagtttgt 17919852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 28751505 - 28751440
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| || ||||||||| |||| || |||||||||||    
T  28751505 aactttaccctcaataaatactcaaacttttctctcgcacaattttcaatgtaactttaagtttgt 28751440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 242 - 299
Target Start/End: Complemental strand, 50349952 - 50349895
Alignment:
Q  242 cctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||| |||||  |||||||| |||||||||||| ||||||| |||||||||||    
T  50349952 cctcaataaatactcaaacttttctctcacacaattttcaatgcaactttaagtttgt 50349895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 44582877 - 44582810
Alignment:
Q  234 aactttaccctcaataagtactcctacttttc--tttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||||  | ||||| |||||| ||||||| |||||||||||    
T  44582877 aactttaccctcaataaatactccaacttttctatctcacataattttcaatgcaactttaagtttgt 44582810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 299
Target Start/End: Original strand, 44583828 - 44583892
Alignment:
Q  235 actttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||| |||||||||||  |||||||||||||| | |||| |||||||  ||||||||||    
T  44583828 actttacccttaataagtactctaacttttctttcacatagttttcaatgcaacattaagtttgt 44583892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 22664994 - 22665057
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| ||  |||| || ||||||||||||| ||| |||||||||||    
T  22664994 aactttaccctcaataaatactccaac--ttctctctcacaatttttaattcaactttaagtttgt 22665057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 28200321 - 28200252
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||| |||||  ||| || ||||||||| ||| ||| |||||||||||||    
T  28200321 aactttaccctcaataaatactccaacttttctctctcgcacaattttcaatacaactttaagtttgtat 28200252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 261 - 299
Target Start/End: Complemental strand, 42650319 - 42650281
Alignment:
Q  261 ttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||| |||||||||||| |||||||||||||||||||    
T  42650319 ttttctctcacacaattttcaatgcaattttaagtttgt 42650281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 297
Target Start/End: Complemental strand, 48259935 - 48259897
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagttt 297  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  48259935 acttttctttcacacaattttcaatgcaactttaagttt 48259897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 24041096 - 24041056
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  24041096 acttttctctcacacaattttcaatgcaactttaagtttgt 24041056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 26252173 - 26252240
Alignment:
Q  234 aactttaccctcaataagtactcctactttt--ctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||| ||||| |||||  ||||||  || |||||||||||| ||||||| |||||||||||    
T  26252173 aactttacccttaataaatactctaacttttttctctcacacaattttcaatgcaactttaagtttgt 26252240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 43105674 - 43105634
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||| |||| ||||||| |||||||||||||||||||    
T  43105674 acttttctctcacgcaattttcaatgcaattttaagtttgt 43105634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 37106917 - 37106980
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagttt 297  Q
    ||||||||||| ||||| |||||| |||||||| |||||||||||| ||||||| |||||||||    
T  37106917 aactttacccttaataaatactccaacttttctctcacacaattttcaatgcaactttaagttt 37106980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 7743456 - 7743521
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  7743456 aactttaccctcaataaatagtccaacttttctctcacacaattttcaatgcaactttaaatttgt 7743521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 2459828 - 2459895
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||||||| |||||||||||    
T  2459828 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatgcaactttaagtttgt 2459895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 43388754 - 43388687
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||  |||||||| ||||| |||||| ||| ||| |||||||||||||    
T  43388754 aactttaccctcaataaatactcaaacttttctctcacataattttcaatacaactttaagtttgtat 43388687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 1360235 - 1360297
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||||||| |||| | |||||||| | | |||||||| ||||||| |||||||||||    
T  1360235 tttaccctcaataaatacttcaacttttctcttaaacaattttcaatgcaactttaagtttgt 1360297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 299
Target Start/End: Original strand, 24775247 - 24775309
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||||||| |||| | |||||||| |||||||||||| |||  || |||||||||||    
T  24775247 tttaccctcaataaatacttcaacttttctctcacacaattttcaatataactttaagtttgt 24775309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 33093423 - 33093488
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctt--tcacacaatttttaatgcaattttaagttt 297  Q
    ||||||||||||||||| || ||| ||||||||   |||||||||||| ||||||| |||||||||    
T  33093423 aactttaccctcaataaatattccaacttttctccctcacacaattttcaatgcaactttaagttt 33093488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 4840824 - 4840759
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  ||||||||  |||||| |||| ||||||| ||||| |||||    
T  4840824 aactttaccctcaataaatactcaaacttttctcccacacagttttcaatgcaactttaattttgt 4840759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 775983 - 775916
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||  ||  |||||||||| ||||||| |||||||||||    
T  775983 aactttaccctcaataaatactctaacttttccctcccacacaattttcaatgcaactttaagtttgt 775916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 34225830 - 34225870
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  34225830 acttttctctcacacaattttcaatgcaactttaagtttgt 34225870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 261 - 301
Target Start/End: Complemental strand, 45148047 - 45148007
Alignment:
Q  261 ttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    |||||| |||||||||||||||||||| |||||| ||||||    
T  45148047 ttttctctcacacaatttttaatgcaactttaagattgtat 45148007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 9022450 - 9022516
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaa-ttttaagtttgt 299  Q
    ||||||||||||||||| |||||| |||||| | |||||||||||| ||||||| ||||||||||||    
T  9022450 aactttaccctcaataaatactccaacttttttctcacacaattttcaatgcaacttttaagtttgt 9022516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 229 - 299
Target Start/End: Original strand, 32661355 - 32661425
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||||  |||||||| |||||||||||| ||| ||| |||||||||||    
T  32661355 ctcccaactttaccctcaataaatactctaacttttctctcacacaattttcaatacaactttaagtttgt 32661425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 7612553 - 7612618
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||| ||||| |||||| |||||||| |||||||||||| ||||||| ||||| |||||    
T  7612553 aactttaccctaaataaatactccaacttttctctcacacaattttcaatgcaactttaattttgt 7612618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 8382575 - 8382510
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||  |||||| |||||||| |||||||||||| ||||||| | |||||||||    
T  8382575 aactttaccctcaatatatactccaacttttctctcacacaattttcaatgcaactataagtttgt 8382510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 27109918 - 27109853
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||| |||||||||||  ||||||| |||||||||||    
T  27109918 aactttaccctcaataaatactctaacttttctctcacacaatttccaatgcaactttaagtttgt 27109853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 229 - 299
Target Start/End: Complemental strand, 3095606 - 3095536
Alignment:
Q  229 ctccgaactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||| ||||||||||||||||| |||| | |||||||| || |||| |||| ||||||| |||||||||||    
T  3095606 ctcccaactttaccctcaataaatacttcaacttttctctcgcacacttttcaatgcaactttaagtttgt 3095536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 11257595 - 11257660
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||  |||||||| |||| | |||||||| |||||||||||| ||||||| |||||||||||    
T  11257595 aactttaatctcaataaatacttcaacttttctctcacacaattttcaatgcaactttaagtttgt 11257660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 22601190 - 22601255
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||||| |||| |||||| || ||||| ||||| |||||| ||||||| |||||||||||    
T  22601190 aactttaccctcgataaatactccaacctttctctcacagaattttcaatgcaactttaagtttgt 22601255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 34461681 - 34461614
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgt 299  Q
    |||||||||||||||||  ||||| |||||||| ||  |||||||||| ||||||| |||||||||||    
T  34461681 aactttaccctcaataaaaactccaacttttctgtctcacacaattttcaatgcaactttaagtttgt 34461614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 5044324 - 5044257
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    |||||||  |||||||| |||| | |||||||| |||||||||||||||| ||| ||||| |||||||    
T  5044324 aactttattctcaataaatacttcaacttttctatcacacaatttttaatacaactttaaatttgtat 5044257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 18673197 - 18673128
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttc--acacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||| | ||||| |||||| |||||||| ||  |||||||||| ||| |||||||||||||||||    
T  18673197 aactttacctttaataaatactccaacttttctctctcacacaattttcaatacaattttaagtttgtat 18673128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 299
Target Start/End: Complemental strand, 32326819 - 32326757
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| |||||| |||||| |||||| | |||||||||||| ||||||| ||||| |||||    
T  32326819 tttacccacaataaatactccaacttttttctcacacaattttcaatgcaactttaaatttgt 32326757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 42946180 - 42946230
Alignment:
Q  237 tttaccctcaataagtactcctacttttctttcacacaatttttaatgcaa 287  Q
    |||||||||||||| |||||  | |||||| ||||||||||||||||||||    
T  42946180 tttaccctcaataaatactctaatttttctctcacacaatttttaatgcaa 42946230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 14541843 - 14541778
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| ||| ||||| |||| | |||||||| || ||||||||| ||||||| |||||||||||    
T  14541843 aactttatccttaataaatacttcaacttttctctctcacaattttcaatgcaactttaagtttgt 14541778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 297
Target Start/End: Original strand, 43938186 - 43938239
Alignment:
Q  244 tcaataagtactcctacttttctttcacacaatttttaatgcaattttaagttt 297  Q
    ||||||| |||||| |||||||| || |||| |||||||||||| |||||||||    
T  43938186 tcaataaatactccaacttttctctcgcacactttttaatgcaactttaagttt 43938239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Original strand, 26439046 - 26439086
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  26439046 acttttctctcacacaattttcaatgcaactttaagtttgt 26439086  T

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Target: scaffold0238 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 16136 - 16071
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| || ||| || ||||| |||||||||||| ||||||| |||||||||||    
T  16136 aactttaccctcaataaatattccaacctttctctcacacaattttcaatgcaactttaagtttgt 16071  T

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Target: scaffold0003 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 321781 - 321848
Alignment:
Q  234 aactttaccctcaataagtactcctacttttc--tttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||||  |||||||  | |||||||||||| |||||||||||||||||||    
T  321781 aactttaccctcaataattactcaaacttttcgctctcacacaattttcaatgcaattttaagtttgt 321848  T

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Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 301
Target Start/End: Complemental strand, 70552 - 70483
Alignment:
Q  234 aactttaccctcaataagtactcctacttt--tctttcacacaatttttaatgcaattttaagtttgtat 301  Q
    ||||||||||||||||| |||||| |||||  ||| |||||||||||| ||| ||| |||||||||||||    
T  70552 aactttaccctcaataaatactccaacttttctctctcacacaattttcaatacaactttaagtttgtat 70483  T

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Target: scaffold0519 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 7797 - 7732
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||  |||||||| |||| | |||||||| |||||||||||| ||||||| |||||||||||    
T  7797 aactttaatctcaataaatacttcaacttttctctcacacaattttcaatgcaactttaagtttgt 7732  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Original strand, 158155 - 158220
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||||||||||||| |||| | |||||||| || || |||||| ||||||| |||||||||||    
T  158155 aactttaccctcaataaatactacaacttttctctcgcataattttcaatgcaactttaagtttgt 158220  T

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Target: scaffold0886 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0886
Description:

Target: scaffold0886; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 4206 - 4141
Alignment:
Q  234 aactttaccctcaataagtactcctacttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    ||||||| ||||||||| |||||| |||||||| ||||| |||||| |||  || |||||||||||    
T  4206 aactttatcctcaataaatactccaacttttctctcacataattttcaatcaaactttaagtttgt 4141  T

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Target: scaffold0072 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 12153 - 12113
Alignment:
Q  259 acttttctttcacacaatttttaatgcaattttaagtttgt 299  Q
    |||||||| |||||||||||| ||||||| |||||||||||    
T  12153 acttttctctcacacaattttcaatgcaactttaagtttgt 12113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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