View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3593_low_19 (Length: 377)

Name: NF3593_low_19
Description: NF3593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3593_low_19
NF3593_low_19
[»] chr3 (25 HSPs)
chr3 (1-182)||(136832-137012)
chr3 (258-377)||(8154590-8154709)
chr3 (258-377)||(41006556-41006675)
chr3 (258-377)||(41015336-41015455)
chr3 (257-377)||(50824351-50824471)
chr3 (257-377)||(50851389-50851509)
chr3 (258-377)||(14538550-14538670)
chr3 (258-377)||(27341281-27341400)
chr3 (257-377)||(28470164-28470283)
chr3 (258-362)||(2211239-2211343)
chr3 (258-369)||(9525388-9525499)
chr3 (258-377)||(17933655-17933774)
chr3 (258-369)||(9555062-9555173)
chr3 (176-238)||(136508-136570)
chr3 (258-377)||(17919199-17919318)
chr3 (260-377)||(43470499-43470615)
chr3 (258-377)||(16816151-16816268)
chr3 (258-321)||(17628265-17628328)
chr3 (258-353)||(21186747-21186842)
chr3 (262-353)||(18349560-18349651)
chr3 (258-360)||(30439-30541)
chr3 (258-319)||(8197700-8197761)
chr3 (258-315)||(18039011-18039068)
chr3 (337-377)||(31276593-31276633)
chr3 (337-377)||(16288686-16288726)
[»] chr2 (26 HSPs)
chr2 (1-142)||(23808369-23808510)
chr2 (256-377)||(20372260-20372380)
chr2 (258-377)||(14582925-14583044)
chr2 (258-377)||(15944503-15944622)
chr2 (258-377)||(15953018-15953137)
chr2 (258-377)||(35138593-35138712)
chr2 (258-377)||(35146929-35147048)
chr2 (258-377)||(41233790-41233909)
chr2 (258-377)||(20621518-20621637)
chr2 (258-377)||(38168303-38168422)
chr2 (258-377)||(42565875-42565994)
chr2 (258-377)||(42574499-42574618)
chr2 (258-367)||(44372705-44372814)
chr2 (258-367)||(44388616-44388725)
chr2 (258-353)||(17687368-17687463)
chr2 (258-369)||(25483601-25483712)
chr2 (258-369)||(25491207-25491318)
chr2 (286-377)||(35037884-35037975)
chr2 (258-377)||(35303737-35303856)
chr2 (176-238)||(23808002-23808064)
chr2 (258-353)||(24285696-24285791)
chr2 (257-363)||(27606605-27606710)
chr2 (260-319)||(26903337-26903396)
chr2 (258-353)||(42249425-42249520)
chr2 (258-319)||(24292372-24292433)
chr2 (337-377)||(21149179-21149219)
[»] chr5 (20 HSPs)
chr5 (258-374)||(29186227-29186343)
chr5 (257-377)||(20398581-20398701)
chr5 (258-377)||(20372859-20372978)
chr5 (258-377)||(31410890-31411009)
chr5 (258-377)||(1728105-1728224)
chr5 (258-377)||(23350022-23350141)
chr5 (258-377)||(24956792-24956911)
chr5 (258-377)||(24965255-24965374)
chr5 (257-377)||(28843939-28844059)
chr5 (257-377)||(43597992-43598112)
chr5 (257-377)||(43603484-43603604)
chr5 (257-377)||(43608976-43609096)
chr5 (258-377)||(28852550-28852669)
chr5 (258-377)||(31421789-31421908)
chr5 (258-369)||(19223555-19223666)
chr5 (337-377)||(17638318-17638358)
chr5 (336-377)||(23037923-23037964)
chr5 (337-377)||(21852586-21852626)
chr5 (337-377)||(21869110-21869150)
chr5 (337-377)||(23028013-23028053)
[»] scaffold0156 (1 HSPs)
scaffold0156 (258-377)||(35302-35421)
[»] chr7 (15 HSPs)
chr7 (258-377)||(13831500-13831619)
chr7 (258-377)||(18304338-18304457)
chr7 (258-377)||(12978455-12978574)
chr7 (258-377)||(13839531-13839650)
chr7 (258-377)||(10439937-10440056)
chr7 (258-377)||(4952343-4952462)
chr7 (258-319)||(4941581-4941642)
chr7 (258-341)||(30244775-30244858)
chr7 (258-377)||(21662968-21663088)
chr7 (58-142)||(13350900-13350984)
chr7 (95-143)||(14158436-14158484)
chr7 (258-362)||(30255413-30255516)
chr7 (258-341)||(30245568-30245651)
chr7 (177-238)||(13350537-13350598)
chr7 (329-373)||(1955702-1955746)
[»] chr8 (17 HSPs)
chr8 (1-142)||(22696292-22696434)
chr8 (257-377)||(39845551-39845671)
chr8 (258-377)||(17973565-17973684)
chr8 (258-377)||(25579758-25579877)
chr8 (258-377)||(39837508-39837627)
chr8 (256-377)||(4839728-4839849)
chr8 (258-377)||(17683742-17683861)
chr8 (258-377)||(30938282-30938401)
chr8 (10-143)||(23925800-23925928)
chr8 (258-377)||(1407019-1407138)
chr8 (258-377)||(17664586-17664705)
chr8 (258-377)||(26873550-26873669)
chr8 (258-369)||(26876008-26876119)
chr8 (176-238)||(23926262-23926324)
chr8 (176-238)||(22695909-22695971)
chr8 (258-319)||(4582204-4582265)
chr8 (337-377)||(6585218-6585258)
[»] chr6 (17 HSPs)
chr6 (258-377)||(33298085-33298203)
chr6 (257-377)||(5004060-5004180)
chr6 (257-377)||(25550294-25550414)
chr6 (258-377)||(13825703-13825822)
chr6 (258-377)||(15391557-15391676)
chr6 (258-377)||(30824475-30824594)
chr6 (258-377)||(5994699-5994818)
chr6 (258-377)||(11279837-11279956)
chr6 (257-377)||(35091622-35091742)
chr6 (260-377)||(25991852-25991969)
chr6 (258-369)||(25506495-25506606)
chr6 (258-377)||(23925335-23925454)
chr6 (257-310)||(5489132-5489185)
chr6 (258-363)||(13490193-13490298)
chr6 (317-377)||(26526648-26526708)
chr6 (258-319)||(11053702-11053764)
chr6 (337-377)||(25651789-25651829)
[»] chr1 (15 HSPs)
chr1 (258-377)||(3432836-3432955)
chr1 (258-377)||(35104010-35104129)
chr1 (258-377)||(31539954-31540073)
chr1 (258-377)||(31548523-31548642)
chr1 (258-377)||(32137700-32137819)
chr1 (258-377)||(41746638-41746758)
chr1 (1-142)||(20598266-20598409)
chr1 (258-363)||(29221448-29221553)
chr1 (299-352)||(51058359-51058412)
chr1 (331-376)||(28457629-28457674)
chr1 (258-377)||(44320138-44320257)
chr1 (258-319)||(52100017-52100078)
chr1 (337-377)||(22460026-22460066)
chr1 (258-353)||(21498868-21498963)
chr1 (337-377)||(13462775-13462815)
[»] scaffold0111 (1 HSPs)
scaffold0111 (258-377)||(33035-33154)
[»] chr4 (12 HSPs)
chr4 (258-377)||(4523626-4523745)
chr4 (258-377)||(8094228-8094347)
chr4 (258-377)||(8103034-8103153)
chr4 (258-377)||(27343637-27343756)
chr4 (258-377)||(12996476-12996595)
chr4 (258-377)||(21532251-21532369)
chr4 (258-377)||(52295604-52295723)
chr4 (258-377)||(12428424-12428543)
chr4 (258-377)||(33188766-33188884)
chr4 (258-331)||(10638328-10638400)
chr4 (258-377)||(3424331-3424448)
chr4 (313-363)||(12402907-12402957)
[»] scaffold0002 (1 HSPs)
scaffold0002 (258-375)||(121228-121345)
[»] scaffold0497 (1 HSPs)
scaffold0497 (258-377)||(10993-11112)
[»] scaffold0209 (1 HSPs)
scaffold0209 (258-377)||(30-149)
[»] scaffold0083 (1 HSPs)
scaffold0083 (258-377)||(15813-15932)
[»] scaffold0632 (1 HSPs)
scaffold0632 (258-377)||(4390-4509)
[»] scaffold0173 (1 HSPs)
scaffold0173 (258-377)||(875-994)
[»] scaffold0039 (1 HSPs)
scaffold0039 (258-369)||(40787-40898)
[»] scaffold0016 (1 HSPs)
scaffold0016 (258-377)||(23464-23584)
[»] scaffold0431 (1 HSPs)
scaffold0431 (258-377)||(139-258)
[»] scaffold0170 (1 HSPs)
scaffold0170 (258-377)||(7136-7255)
[»] scaffold0222 (1 HSPs)
scaffold0222 (258-377)||(20428-20547)
[»] scaffold0044 (1 HSPs)
scaffold0044 (252-319)||(81790-81857)
[»] scaffold0100 (1 HSPs)
scaffold0100 (93-143)||(4716-4766)
[»] scaffold0315 (1 HSPs)
scaffold0315 (328-377)||(10602-10651)
[»] scaffold0048 (1 HSPs)
scaffold0048 (257-304)||(7648-7695)
[»] scaffold0027 (2 HSPs)
scaffold0027 (326-377)||(65650-65701)
scaffold0027 (258-293)||(65708-65743)
[»] scaffold0991 (1 HSPs)
scaffold0991 (258-319)||(377-438)
[»] scaffold0389 (1 HSPs)
scaffold0389 (258-353)||(416-511)
[»] scaffold0015 (1 HSPs)
scaffold0015 (258-352)||(192528-192622)
[»] scaffold0863 (1 HSPs)
scaffold0863 (258-319)||(376-437)
[»] scaffold0605 (1 HSPs)
scaffold0605 (337-377)||(742-782)


Alignment Details
Target: chr3 (Bit Score: 121; Significance: 7e-62; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 137012 - 136832
Alignment:
Q  1 cttggaaaaagagggaagttgtaaaatttcatttatgtttaatttttcttcaagtgttatcattaacttgaaagttttacagtttcctaggaagtttaac 100  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||  |||||||    
T  137012 cttggaaaacgagggaagttgtaaaatttcatttatatttaatttttcttcaagtgttatcattaacttggaagttttacggtttcttaggcggtttaac 136913  T
Q  101 ttgtgtggttaaacaaaagagactttttagtttctcatcattgnnnnnnncttgaaaaattgttccaagtattaattttgta 182  Q
    |||||||||||||||||||||||||||||||||||||||||||       |||| ||| |||||||||||||||||||||||    
T  136912 ttgtgtggttaaacaaaagagactttttagtttctcatcattgattttttcttg-aaacttgttccaagtattaattttgta 136832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 8154709 - 8154590
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  8154709 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 8154610  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  8154609 agaggttactttgaagtacc 8154590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 41006556 - 41006675
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  41006556 tgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 41006655  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  41006656 ggaggttactttgaagtacc 41006675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 41015336 - 41015455
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  41015336 tgtcataccccaaattttgaccatttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 41015435  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  41015436 ggaggttactttgaagtacc 41015455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 50824351 - 50824471
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||    
T  50824351 atgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggca 50824450  T
Q  357 aagaggttactttgaagtacc 377  Q
     ||||||||||||||||||||    
T  50824451 gagaggttactttgaagtacc 50824471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 50851509 - 50851389
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||    
T  50851509 atgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggca 50851410  T
Q  357 aagaggttactttgaagtacc 377  Q
     ||||||||||||||||||||    
T  50851409 gagaggttactttgaagtacc 50851389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 14538670 - 14538550
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgac-a 356  Q
    |||||||||| |||||||||||| |||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| | |    
T  14538670 tgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaa 14538571  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  14538570 aagaggttactttgaagtacc 14538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 27341400 - 27341281
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||| ||     
T  27341400 tgtcataccccaaattttgaccacttttctctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 27341301  T
Q  358 agaggttactttgaagtacc 377  Q
    | ||||||||||||||||||    
T  27341300 aaaggttactttgaagtacc 27341281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 28470283 - 28470164
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||    
T  28470283 atgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcgaca 28470184  T
Q  357 aagaggttactttgaagtacc 377  Q
    || || ||||| |||||||||    
T  28470183 aa-agattactatgaagtacc 28470164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 2211239 - 2211343
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    ||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||  |||||||||||||||| | ||||||||||| |||    
T  2211239 tgtcataccctaaattttgaccacttttctctattcttacctattttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggcaa 2211338  T
Q  358 agagg 362  Q
    |||||    
T  2211339 agagg 2211343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 9525499 - 9525388
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||| | ||||||||||| ||     
T  9525499 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcag 9525400  T
Q  358 agaggttacttt 369  Q
    | ||||||||||    
T  9525399 aaaggttacttt 9525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 17933655 - 17933774
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||| || |||||||||  ||||| ||||||||||  |      
T  17933655 tgtcataccccaaattttgaccaattttctctatttttacccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttcttcgg 17933754  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  17933755 agaggttactttgaagtacc 17933774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 9555173 - 9555062
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||||| ||||||||||||||| |||||||||||| |||| | ||||||||||| ||     
T  9555173 tgtcataccccaaattttgatcacttttctctattcttacccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcag 9555074  T
Q  358 agaggttacttt 369  Q
    | ||||||||||    
T  9555073 aaaggttacttt 9555062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 136570 - 136508
Alignment:
Q  176 ttttgtatggcaacttgagcctcttgcttcatgagatcttccttggccaaaaggttggttttt 238  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  136570 ttttgtatggcaacttgagcctcttgcttcatgagatcttccatggccaaaaggttggttttt 136508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 17919199 - 17919318
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  ||| |||||||||||||||||||||||  |  |||||||||  ||||| ||||||||||| |      
T  17919199 tgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtcgg 17919298  T
Q  358 agaggttactttgaagtacc 377  Q
    |||||||||||| |||||||    
T  17919299 agaggttactttaaagtacc 17919318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 43470615 - 43470499
Alignment:
Q  260 tcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaaag 359  Q
    |||||||| |||||||||| | |||| |||||  |||||| ||||||||||||||||||||  | |||||||  |||||||| ||||||||||| || ||    
T  43470615 tcataccccaaattttgactactttt-tctatttttaccctttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagag 43470517  T
Q  360 aggttactttgaagtacc 377  Q
    ||||||||||||||||||    
T  43470516 aggttactttgaagtacc 43470499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 16816268 - 16816151
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  |||| ||||||||||||||||||||||  || |||||||||  ||||| ||||||||| |||      
T  16816268 tgtcataccc-aaattttgaccacttttctctatttttactcattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattttgacgg 16816170  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||| ||||||||||||||    
T  16816169 agagg-tactttgaagtacc 16816151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 258 - 321
Target Start/End: Original strand, 17628265 - 17628328
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagt 321  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  17628265 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagt 17628328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 21186747 - 21186842
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    |||||||||| |||||||||||| |||| ||| |  ||| |||||||||||||| ||||||||  | |||||||||| ||||||||||||||||||    
T  21186747 tgtcataccccaaattttgaccacttttatctgtttttatccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttcg 21186842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 353
Target Start/End: Original strand, 18349560 - 18349651
Alignment:
Q  262 ataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    |||||| |||||||||| | ||||||||||  |||| ||||||||||||| ||||||| | || ||| | |||||||| | |||||||||||    
T  18349560 ataccccaaattttgacaacttttctctatttttacacattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttcg 18349651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 258 - 360
Target Start/End: Complemental strand, 30541 - 30439
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  |||| |||||| || ||| |||||||   || ||| | |||||||| | ||||||||||| |||    
T  30541 tgtcataccccaaattttgaccacttttctctatttttacacattttgtttgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcggcaa 30442  T
Q  358 aga 360  Q
    |||    
T  30441 aga 30439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 8197761 - 8197700
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    |||||||||| |||||||||||| ||||||||||  |||| |||||| |||||| |||||||    
T  8197761 tgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaa 8197700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 315
Target Start/End: Original strand, 18039011 - 18039068
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttt 315  Q
    |||||||||| |||||||||||| |||||||  |  ||||||||||||||||||||||    
T  18039011 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtatttt 18039068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 31276593 - 31276633
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  31276593 tttcaaacgaaatttcgacaagaaggttactttgaagtacc 31276633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 16288686 - 16288726
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    |||| |||||||||||| || ||||||||||||||||||||    
T  16288686 tttctaacgaaatttcggcagagaggttactttgaagtacc 16288726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 102; Significance: 1e-50; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 23808510 - 23808369
Alignment:
Q  1 cttggaaaaagagggaagttgtaaaatttcatttatgtttaatttttcttcaagtgttatcattaacttgaaagttttacagtttcctaggaagtttaac 100  Q
    ||||||||||||| |||||||||||||||||||||| ||| ||||||||  || |||||||||||||||| ||||||||| ||||||||||  |||||||    
T  23808510 cttggaaaaagagagaagttgtaaaatttcatttattttttatttttctgaaaatgttatcattaacttggaagttttacggtttcctaggcggtttaac 23808411  T
Q  101 ttgtgtggttaaacaaaagagactttttagtttctcatcatt 142  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  23808410 ttgtgtggttaaacaaaagagactttttagtttctcatcatt 23808369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 256 - 377
Target Start/End: Complemental strand, 20372380 - 20372260
Alignment:
Q  256 tatgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgac 355  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||    
T  20372380 tatgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgac 20372281  T
Q  356 aaagaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||||    
T  20372280 aaa-aggttactttgaagtacc 20372260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 14582925 - 14583044
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  14582925 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 14583024  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  14583025 ggaggttactttgaagtacc 14583044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 15944622 - 15944503
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  15944622 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 15944523  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  15944522 ggaggttactttgaagtacc 15944503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 15953137 - 15953018
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  15953137 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 15953038  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  15953037 ggaggttactttgaagtacc 15953018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 35138593 - 35138712
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  35138593 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 35138692  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  35138693 ggaggttactttgaagtacc 35138712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 35146929 - 35147048
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  35146929 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 35147028  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  35147029 ggaggttactttgaagtacc 35147048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 41233909 - 41233790
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  41233909 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 41233810  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  41233809 ggaggttactttgaagtacc 41233790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 20621518 - 20621637
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||| || ||||||||||||    
T  20621518 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgacaa 20621617  T
Q  358 agaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||    
T  20621618 agatgttactttgaagtacc 20621637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 38168422 - 38168303
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  38168422 tgtcatactccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 38168323  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  38168322 ggaggttactttgaagtacc 38168303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 42565994 - 42565875
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||    
T  42565994 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 42565895  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  42565894 agaggttactttgaagtacc 42565875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 42574618 - 42574499
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||    
T  42574618 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 42574519  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  42574518 agaggttactttgaagtacc 42574499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 258 - 367
Target Start/End: Original strand, 44372705 - 44372814
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  44372705 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaa 44372804  T
Q  358 agaggttact 367  Q
    ||||||||||    
T  44372805 agaggttact 44372814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 258 - 367
Target Start/End: Original strand, 44388616 - 44388725
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||||    
T  44388616 tgtcataccccaaattttgaccacttttttctatctttacccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaa 44388715  T
Q  358 agaggttact 367  Q
    ||||||||||    
T  44388716 agaggttact 44388725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 17687463 - 17687368
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||| |||||||||||    
T  17687463 tgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcg 17687368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 25483601 - 25483712
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||| |||||||||| ||||||||||||| | ||||||||||||||||| ||||||| ||||||     
T  25483601 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacag 25483700  T
Q  358 agaggttacttt 369  Q
    ||||||||||||    
T  25483701 agaggttacttt 25483712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 25491207 - 25491318
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||| |||||||||| ||||||||||||| | ||||||||||||||||| ||||||| ||||||     
T  25491207 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacag 25491306  T
Q  358 agaggttacttt 369  Q
    ||||||||||||    
T  25491307 agaggttacttt 25491318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 286 - 377
Target Start/End: Original strand, 35037884 - 35037975
Alignment:
Q  286 ctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| | ||||||||||||||| ||||    
T  35037884 ctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacc 35037975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 35303737 - 35303856
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||| ||||||||||    |||||| |||||||| |||||| ||||    ||| ||||||||||||| ||||||||||| ||     
T  35303737 tgtcataccccaaattttgactatttttctctgattttaccccttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggcag 35303836  T
Q  358 agaggttactttgaagtacc 377  Q
    |||||||| |||||||||||    
T  35303837 agaggttaatttgaagtacc 35303856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 23808064 - 23808002
Alignment:
Q  176 ttttgtatggcaacttgagcctcttgcttcatgagatcttccttggccaaaaggttggttttt 238  Q
    ||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| ||||    
T  23808064 ttttgtatggcaacttgagcctcctacttcatgagatcctccttggccaaaaggttggctttt 23808002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 24285696 - 24285791
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    |||||||||| |||||||||||| |||||| |||  |||| |||||| |||||| |||||||  ||| ||||| |||||||| | |||||||||||    
T  24285696 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaaactggaaatttccgtcgtttaagacgaaatttcg 24285791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 257 - 363
Target Start/End: Complemental strand, 27606710 - 27606605
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||| | |||||||||| | ||||||||||  ||| | |||||||||||| ||||||||  ||||||||| ||||| ||| ||||||||||| ||    
T  27606710 atgtcatactccaaattttgactacttttctctatttttatcaattttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttcggca 27606612  T
Q  357 aagaggt 363  Q
     ||||||    
T  27606611 gagaggt 27606605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 319
Target Start/End: Complemental strand, 26903396 - 26903337
Alignment:
Q  260 tcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    ||||||||||||||||||||| ||||||||||  |||| |||||| |||||| |||||||    
T  26903396 tcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaa 26903337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 42249520 - 42249425
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    |||||||||| |||||||||||| ||||||||||  |||| |||||  |||||| ||||||| | |  ||| | |||||||| | |||||||||||    
T  42249520 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaatcgaaaatgtccgtcgttttagacgaaatttcg 42249425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 24292372 - 24292433
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    |||||||||| |||||||||||| |||||| |||  |||| |||||| |||||| |||||||    
T  24292372 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaa 24292433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 21149179 - 21149219
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||||||||||||||  ||||||| |||||||||||    
T  21149179 tttcaaacgaaatttcgacatggaggttattttgaagtacc 21149219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 6e-50; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 258 - 374
Target Start/End: Complemental strand, 29186343 - 29186227
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  29186343 tgtcataccccaaattttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 29186244  T
Q  358 agaggttactttgaagt 374  Q
    |||||||||||||||||    
T  29186243 agaggttactttgaagt 29186227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 20398701 - 20398581
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  20398701 atgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgaca 20398602  T
Q  357 aagaggttactttgaagtacc 377  Q
     ||||||||||||||||||||    
T  20398601 gagaggttactttgaagtacc 20398581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 20372978 - 20372859
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||     
T  20372978 tgtcataccccaaattttgaccacttttctctattcttaccgattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacag 20372879  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  20372878 agaggttactttgaagtacc 20372859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 31410890 - 31411009
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||||||  ||||||||| || ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  31410890 tgtcataccccaaattttgaccacatttctctattctaacccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaa 31410989  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  31410990 agaggttactttgaagtacc 31411009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 1728224 - 1728105
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||    
T  1728224 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttgacaa 1728125  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  1728124 agaggttactttgaagtacc 1728105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 23350141 - 23350022
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||||||||| |||    
T  23350141 tgtcataccccaaattttgaccatttttctctatttttacccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggcaa 23350042  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  23350041 agaggttactttgaagtacc 23350022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 24956911 - 24956792
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  24956911 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 24956812  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  24956811 ggaggttactttgaagtacc 24956792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 24965374 - 24965255
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  24965374 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 24965275  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  24965274 ggaggttactttgaagtacc 24965255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 28843939 - 28844059
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | ||    
T  28843939 atgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggca 28844038  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  28844039 aagaggttactttgaagtacc 28844059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 43598112 - 43597992
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| | ||    
T  43598112 atgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggca 43598013  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  43598012 aagaggttactttgaagtacc 43597992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 43603604 - 43603484
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| | ||    
T  43603604 atgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggca 43603505  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  43603504 aagaggttactttgaagtacc 43603484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 43609096 - 43608976
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| | ||    
T  43609096 atgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggca 43608997  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  43608996 aagaggttactttgaagtacc 43608976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 28852550 - 28852669
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||    
T  28852550 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 28852649  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  28852650 agaggttactttgaagtacc 28852669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 31421789 - 31421908
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |||| || |||||||||||||||| || ||||||||||||    
T  31421789 tgtcatacccaaaattttgaccacttttctctattcttacccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaa 31421888  T
Q  358 agaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||    
T  31421889 agatgttactttgaagtacc 31421908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 369
Target Start/End: Original strand, 19223555 - 19223666
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||| |||||||||| ||||||||||||| | ||||| ||||||||||| | ||||| ||||||     
T  19223555 tgtcataccccaaattttgaccacttttctctattcttatccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaatctcgacag 19223654  T
Q  358 agaggttacttt 369  Q
    ||||||||||||    
T  19223655 agaggttacttt 19223666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 17638318 - 17638358
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  17638318 tttcaaacgaaatttcgacagagaggttactttgaagtacc 17638358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 336 - 377
Target Start/End: Original strand, 23037923 - 23037964
Alignment:
Q  336 gtttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    |||||| ||||||||||| || ||||||||||||||||||||    
T  23037923 gtttcagacgaaatttcggcagagaggttactttgaagtacc 23037964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 21852626 - 21852586
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  21852626 tttcaaacgaaatttcggcagggaggttactttgaagtacc 21852586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 21869150 - 21869110
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||||||||||| ||  |||||||||||||||||||    
T  21869150 tttcaaacgaaatttcggcagggaggttactttgaagtacc 21869110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 23028053 - 23028013
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||| ||||||||||| || ||||||||||||||||||||    
T  23028053 tttcagacgaaatttcggcagagaggttactttgaagtacc 23028013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 35421 - 35302
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  35421 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 35322  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  35321 agaggttactttgaagtacc 35302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 5e-47; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 13831500 - 13831619
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    ||||||||||||||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  13831500 tgtcataccctaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 13831599  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  13831600 agaggttactttgaagtacc 13831619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 18304457 - 18304338
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  18304457 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 18304358  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  18304357 agaggttactttgaagtacc 18304338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 12978455 - 12978574
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  12978455 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 12978554  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  12978555 ggaggttactttgaagtacc 12978574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 13839531 - 13839650
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  13839531 tgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 13839630  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  13839631 agaggttactttgaagtacc 13839650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 10439937 - 10440056
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||     
T  10439937 tgtcataccccaaattttgaccacttttctctattcttgcccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 10440036  T
Q  358 agaggttactttgaagtacc 377  Q
    |||||||||||| |||||||    
T  10440037 agaggttactttaaagtacc 10440056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 4952462 - 4952343
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||  |||||||||||| |||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||||||||| | |||    
T  4952462 tgtcatacctcaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaa 4952363  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  4952362 agaggttactttgaagtacc 4952343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 4941642 - 4941581
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  4941642 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaa 4941581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 30244775 - 30244858
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttca 341  Q
    |||||||||  |||||||||||| ||||||||||  ||| ||||||||||||||||||||||||  ||||||||||| ||||||    
T  30244775 tgtcatacctcaaattttgaccacttttctctatttttatccattttattcgtatttttaaagtcaggaattttcgttgtttca 30244858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 21663088 - 21662968
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtat-ttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    |||||||||| ||||||||| || |||| ||| |  ||||||||||||||||||| ||||||||  | || | |||||||||| | |||||||||| |||    
T  21663088 tgtcataccccaaattttgatcacttttatctgtttttacccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttcaaca 21662989  T
Q  357 aagaggttactttgaagtacc 377  Q
      |||||||||||||||||||    
T  21662988 gggaggttactttgaagtacc 21662968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 13350984 - 13350900
Alignment:
Q  58 tatcattaacttgaaagttttacagtttcctaggaagtttaacttgtgtggttaaacaaaagagactttttagtttctcatcatt 142  Q
    |||||||||  || ||||||||| |||||||||| |||||||||||| | ||||| |||||||  |||||||| |||||||||||    
T  13350984 tatcattaatgtggaagttttacggtttcctaggcagtttaacttgtatagttaagcaaaagaagctttttagcttctcatcatt 13350900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 95 - 143
Target Start/End: Complemental strand, 14158484 - 14158436
Alignment:
Q  95 tttaacttgtgtggttaaacaaaagagactttttagtttctcatcattg 143  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  14158484 tttaacttgtgtagttaaacaaaagaaactttttagtttctcatcattg 14158436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 362
Target Start/End: Original strand, 30255413 - 30255516
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  ||| ||||||||||||||||||| | ||  | ||||||||| ||||||  || ||||||| ||     
T  30255413 tgtcataccc-aaattttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttcagtcgtaatttcggcag 30255511  T
Q  358 agagg 362  Q
    |||||    
T  30255512 agagg 30255516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 341
Target Start/End: Original strand, 30245568 - 30245651
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttca 341  Q
    |||||||||| || ||||||||| ||||||||||  ||| ||||||||||||||||||| | ||  | ||||||||| ||||||    
T  30245568 tgtcatacccaaatttttgaccacttttctctatttttatccattttattcgtatttttcatgtcagaaattttcgttgtttca 30245651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 13350598 - 13350537
Alignment:
Q  177 tttgtatggcaacttgagcctcttgcttcatgagatcttccttggccaaaaggttggttttt 238  Q
    |||||||||| |||||||| ||| | ||||||||||| || |||||||| || |||||||||    
T  13350598 tttgtatggccacttgagcttctcgattcatgagatcctctttggccaagagtttggttttt 13350537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 373
Target Start/End: Complemental strand, 1955746 - 1955702
Alignment:
Q  329 tttcgtcgtttcaaacgaaatttcgacaaagaggttactttgaag 373  Q
    ||||||||||||| || |||||||| || ||||||||||||||||    
T  1955746 tttcgtcgtttcagacaaaatttcggcagagaggttactttgaag 1955702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 2e-46; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 22696434 - 22696292
Alignment:
Q  1 cttggaaaaagagggaagttgtaaaatttcatttatgtttaatt-tttcttcaagtgttatcattaacttgaaagttttacagtttcctaggaagtttaa 99  Q
    |||||||||||||| |||| |||||||||||||| | ||| ||| ||||||||||||| ||||| |||||| ||||||||||||||||||||  ||||||    
T  22696434 cttggaaaaagaggaaagtcgtaaaatttcatttcttttttattgtttcttcaagtgtcatcatgaacttggaagttttacagtttcctaggtggtttaa 22696335  T
Q  100 cttgtgtggttaaacaaaagagactttttagtttctcatcatt 142  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  22696334 cttgtgtggttaaacaaaagagactttttagtttctcatcatt 22696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 39845671 - 39845551
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||    
T  39845671 atgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgaca 39845572  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  39845571 aagaggttactttgaagtacc 39845551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 17973565 - 17973684
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||     
T  17973565 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcag 17973664  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  17973665 agaggttactttgaagtacc 17973684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 25579877 - 25579758
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  25579877 tgtcataccctaaattttgaccacttttatctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 25579778  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  25579777 agaggttactttgaagtacc 25579758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 39837627 - 39837508
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  39837627 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 39837528  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  39837527 agaggttactttgaagtacc 39837508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 256 - 377
Target Start/End: Complemental strand, 4839849 - 4839728
Alignment:
Q  256 tatgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgac 355  Q
    |||||||||||| |||||||||||  |||||||||| |||||| |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  4839849 tatgtcataccccaaattttgaccgcttttctctattcttacctattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgac 4839750  T
Q  356 aaagaggttactttgaagtacc 377  Q
    ||||| ||||||||||||||||    
T  4839749 aaagaagttactttgaagtacc 4839728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 17683861 - 17683742
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||| |||||    
T  17683861 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaa 17683762  T
Q  358 agaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||    
T  17683761 agaagttactttgaagtacc 17683742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 30938282 - 30938401
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  30938282 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30938381  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  30938382 ggaggttactttgaagtacc 30938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 10 - 143
Target Start/End: Original strand, 23925800 - 23925928
Alignment:
Q  10 agagggaagttgtaaaatttcatttatgtttaatttttcttcaagtgttatcattaacttgaaagttttacagtttcctaggaagtttaacttgtgtggt 109  Q
    ||||||||||||||||||||||||| |     |||||||| |||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||    
T  23925800 agagggaagttgtaaaatttcattttt-----atttttctgcaagtgttatcattaacttggaagttttacagtttcctaggcggtttaacttgtgtggt 23925894  T
Q  110 taaacaaaagagactttttagtttctcatcattg 143  Q
    ||||||||||| |||||| |||||||||||||||    
T  23925895 taaacaaaagatacttttaagtttctcatcattg 23925928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 1407138 - 1407019
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||    
T  1407138 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaa 1407039  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  1407038 agaggttactttgaagtacc 1407019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 17664705 - 17664586
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| |||||||||| |||||||| ||||||||| |||||    
T  17664705 tgtcataccccaaattttgaccacttttctctatccttgcccattttattcgtatttttagagtcgggaattttcatcgtttcagacgaaattttgacaa 17664606  T
Q  358 agaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||    
T  17664605 agaagttactttgaagtacc 17664586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 26873669 - 26873550
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||| ||| || || |||||||||||||||| |||||||||||||||    
T  26873669 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgacaa 26873570  T
Q  358 agaggttactttgaagtacc 377  Q
    |||||||||||| |||||||    
T  26873569 agaggttactttaaagtacc 26873550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 26876119 - 26876008
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||||||||||||||| || || |||||| ||||||||| |||||||||||||||    
T  26876119 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaa 26876020  T
Q  358 agaggttacttt 369  Q
    ||||||||||||    
T  26876019 agaggttacttt 26876008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 176 - 238
Target Start/End: Original strand, 23926262 - 23926324
Alignment:
Q  176 ttttgtatggcaacttgagcctcttgcttcatgagatcttccttggccaaaaggttggttttt 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23926262 ttttgtatggcaacttgagcctcttgcttcatgagatcttccttggccaaaaggttggttttt 23926324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 176 - 238
Target Start/End: Complemental strand, 22695971 - 22695909
Alignment:
Q  176 ttttgtatggcaacttgagcctcttgcttcatgagatcttccttggccaaaaggttggttttt 238  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||| ||||    
T  22695971 ttttggatggcaacttgagcctcctgcttcatgagatcctccttggccaaaaggttggctttt 22695909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 4582204 - 4582265
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    ||||||||| ||||||||||||| ||||||||||  |||| |||||| ||| || |||||||    
T  4582204 tgtcataccttaaattttgaccacttttctctatttttacacattttgttcatacttttaaa 4582265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 6585258 - 6585218
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  6585258 tttcaaacgaaatttcgacagggaggttactttggagtacc 6585218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 33298085 - 33298203
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  33298085 tgtcataccccaacttttgaccacttttctctatccttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaa 33298184  T
Q  358 agaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||    
T  33298185 aga-gttactttgaagtacc 33298203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 5004060 - 5004180
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | ||    
T  5004060 atgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggca 5004159  T
Q  357 aagaggttactttgaagtacc 377  Q
    | |||||||||||||||||||    
T  5004160 aggaggttactttgaagtacc 5004180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 257 - 377
Target Start/End: Original strand, 25550294 - 25550414
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| | ||    
T  25550294 atgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggca 25550393  T
Q  357 aagaggttactttgaagtacc 377  Q
     ||||||||||||||||||||    
T  25550394 gagaggttactttgaagtacc 25550414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 13825703 - 13825822
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||| || |||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||     
T  13825703 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgacag 13825802  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  13825803 agaggttactttgaagtacc 13825822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 15391676 - 15391557
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    ||||||| || |||||||||||| |||||||||||||| ||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||||    
T  15391676 tgtcatatcccaaattttgaccacttttctctatccttgcccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgacaa 15391577  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  15391576 agaggttactttgaagtacc 15391557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 30824594 - 30824475
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  30824594 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 30824495  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  30824494 agaggttactttgaagtacc 30824475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 5994699 - 5994818
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| || |||||| | |||    
T  5994699 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggcaa 5994798  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  5994799 agaggttactttgaagtacc 5994818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 11279837 - 11279956
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||    
T  11279837 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 11279936  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  11279937 agaggttactttgaagtacc 11279956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 257 - 377
Target Start/End: Complemental strand, 35091742 - 35091622
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    ||||||||||| |||||||||||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||||||||| ||||||||| | ||    
T  35091742 atgtcataccccaaattttgaccacttttctctattcttacccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggca 35091643  T
Q  357 aagaggttactttgaagtacc 377  Q
    | |||||||||||||||||||    
T  35091642 aggaggttactttgaagtacc 35091622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 260 - 377
Target Start/End: Original strand, 25991852 - 25991969
Alignment:
Q  260 tcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaaag 359  Q
    |||||||| |||| ||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||  | ||    
T  25991852 tcataccccaaatgttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagag 25991951  T
Q  360 aggttactttgaagtacc 377  Q
    ||||||||||||||||||    
T  25991952 aggttactttgaagtacc 25991969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 25506606 - 25506495
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||| || |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||| ||     
T  25506606 tgtcataccccaaattttgatcacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcag 25506507  T
Q  358 agaggttacttt 369  Q
    ||||||||||||    
T  25506506 agaggttacttt 25506495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 23925335 - 23925454
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| || |||   |||||||||||  |     
T  23925335 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtag 23925434  T
Q  358 agaggttactttgaagtacc 377  Q
    ||| ||||||||||||||||    
T  23925435 agatgttactttgaagtacc 23925454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 257 - 310
Target Start/End: Complemental strand, 5489185 - 5489132
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccattttattcgt 310  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||||||||    
T  5489185 atgtcataccccaaattttgaccacttttctctattcttacccattttattcgt 5489132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 363
Target Start/End: Original strand, 13490193 - 13490298
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  ||| ||||||||||||||| | ||||   ||||||||||||  ||||| || |||| ||| ||     
T  13490193 tgtcataccccaaattttgaccacttttctctatttttatccattttattcgtatctgtaaaaccgggaattttcgttatttcagacaaaatctcggcag 13490292  T
Q  358 agaggt 363  Q
    ||||||    
T  13490293 agaggt 13490298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 26526708 - 26526648
Alignment:
Q  317 aaagttgggaattttcgtcgtttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||| ||||||||||||||||||| ||||||| ||| || || |||||||||||| ||||    
T  26526708 aaagtcgggaattttcgtcgtttcagacgaaatatcggcagagtggttactttgaattacc 26526648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 11053702 - 11053764
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacc-cattttattcgtatttttaaa 319  Q
    |||||||||| |||||||||||| |||| |||||  |||||  ||||||||||||||||||||    
T  11053702 tgtcataccccaaattttgaccacttttttctatttttaccaaattttattcgtatttttaaa 11053764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 25651789 - 25651829
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  25651789 tttcaaacgaaatttcgacagggaggttactttggagtacc 25651829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 3432955 - 3432836
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  3432955 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 3432856  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  3432855 agaggttactttgaagtacc 3432836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 35104129 - 35104010
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||    
T  35104129 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaa 35104030  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  35104029 ggaggttactttgaagtacc 35104010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 31539954 - 31540073
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  31539954 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 31540053  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  31540054 ggaggttactttgaagtacc 31540073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 31548523 - 31548642
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  31548523 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 31548622  T
Q  358 agaggttactttgaagtacc 377  Q
     |||||||||||||||||||    
T  31548623 ggaggttactttgaagtacc 31548642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 32137819 - 32137700
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||| ||||| ||||||||| || |||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||||    
T  32137819 tgtcttaccccaaattttgatcacttttctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaa 32137720  T
Q  358 agaggttactttgaagtacc 377  Q
    | | ||||||||||||||||    
T  32137719 ataagttactttgaagtacc 32137700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 41746758 - 41746638
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgac-a 356  Q
    ||||||| || |||||||||||| |||| ||||| |||| ||||||||||| |||||||||||| ||||||||||||||||||| || |||||||| | |    
T  41746758 tgtcatatcccaaattttgaccacttttatctattcttatccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcaa 41746659  T
Q  357 aagaggttactttgaagtacc 377  Q
    |||||||||||||||||||||    
T  41746658 aagaggttactttgaagtacc 41746638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 20598409 - 20598266
Alignment:
Q  1 cttggaaaaagagggaagttgtaaaatttcatttatgtttaatt--tttcttcaagtgttatcattaacttgaaagttttacagtttcctaggaagttta 98  Q
    |||||||| |||||||||||||||||| || ||||| |||||||  ||||| |||||| |||||||||   ||||  ||||  |||||||||| ||||||    
T  20598409 cttggaaagagagggaagttgtaaaatctcttttatttttaattattttctgcaagtgatatcattaaaaggaaaactttatggtttcctaggtagttta 20598310  T
Q  99 acttgtgtggttaaacaaaagagactttttagtttctcatcatt 142  Q
    ||||||  |||||||||||||||||||||||||||||| |||||    
T  20598309 acttgttcggttaaacaaaagagactttttagtttctcttcatt 20598266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 258 - 363
Target Start/End: Complemental strand, 29221553 - 29221448
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||| | ||||||||||  |||||||||||||||||||||||||||| || ||||||||   ||||| ||||||||||| ||     
T  29221553 tgtcataccccaaattttgactacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggcag 29221454  T
Q  358 agaggt 363  Q
    ||||||    
T  29221453 agaggt 29221448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 299 - 352
Target Start/End: Complemental strand, 51058412 - 51058359
Alignment:
Q  299 cattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttc 352  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  51058412 cattttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaatttc 51058359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 28457629 - 28457674
Alignment:
Q  331 tcgtcgtttcaaacgaaatttcgacaaagaggttactttgaagtac 376  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||    
T  28457629 tcgtcgtttcagacgaaatttcgacagagaggttactttgaagtac 28457674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 44320257 - 44320138
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||  |  |||||||||||||||||||||| || |  | |||   ||||||||||| ||||||||||  ||     
T  44320257 tgtcataccccaaattttgaccacttttctcgctttttacccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcag 44320158  T
Q  358 agaggttactttgaagtacc 377  Q
     ||||||||||  |||||||    
T  44320157 ggaggttacttgaaagtacc 44320138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 319
Target Start/End: Original strand, 52100017 - 52100078
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    ||||||| |||||||||||||||||||||||| |  |||| |||||| |||||| |||||||    
T  52100017 tgtcatatcctaaattttgaccatttttctctgtttttacacattttgttcgtacttttaaa 52100078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 22460026 - 22460066
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  22460026 tttcaaacgaaatttcgacagagaggttactttggagtacc 22460066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 353
Target Start/End: Complemental strand, 21498963 - 21498868
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    |||||||||| |||||||||||| ||||||||||  |||| |||||  |||||| |||||||   || ||| | |||||||| | |||||||||||    
T  21498963 tgtcataccccaaattttgaccacttttctctatttttacacatttcgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcg 21498868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 13462775 - 13462815
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||| ||||||||| || ||||||||||||||||||||||    
T  13462775 tttcagacgaaatttggataaagaggttactttgaagtacc 13462815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 88; Significance: 3e-42; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 33035 - 33154
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||||| |||    
T  33035 tgtcataccccaaattttgaccacttttctctattcttacccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaa 33134  T
Q  358 agaggttactttgaagtacc 377  Q
    |||||||||||| |||||||    
T  33135 agaggttactttaaagtacc 33154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 3e-42; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 4523745 - 4523626
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| |||| |||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||    
T  4523745 tgtcataccccaaattttgaccactttcctctattcttatccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaa 4523646  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  4523645 agaggttactttgaagtacc 4523626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 8094347 - 8094228
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  8094347 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 8094248  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  8094247 agaggttactttgaagtacc 8094228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 8103153 - 8103034
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||| | |||    
T  8103153 tgtcataccccaaattttgaccacttttctctattcttacccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaa 8103054  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  8103053 agaggttactttgaagtacc 8103034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 27343756 - 27343637
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||     
T  27343756 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacag 27343657  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  27343656 agaggttactttgaagtacc 27343637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 12996476 - 12996595
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||  |     
T  12996476 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggtag 12996575  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  12996576 agaggttactttgaagtacc 12996595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 21532369 - 21532251
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||    
T  21532369 tgtcataccccaaattttgaccacttttctctatccttatccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgacaa 21532270  T
Q  358 agaggttactttgaagtacc 377  Q
    | || |||||||||||||||    
T  21532269 a-agattactttgaagtacc 21532251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 52295604 - 52295723
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||| ||     
T  52295604 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcag 52295703  T
Q  358 agaggttactttgaagtacc 377  Q
    |||| |||||||||||||||    
T  52295704 agagattactttgaagtacc 52295723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 12428543 - 12428424
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||   ||||||||||||||||||||||||||   | |||||||||  ||||| ||||||||||||| |    
T  12428543 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacga 12428444  T
Q  358 agaggttactttgaagtacc 377  Q
    |||| |||||||||||||||    
T  12428443 agagtttactttgaagtacc 12428424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 33188766 - 33188884
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||| | |||| |||||  ||| || ||||||| |||||||||||| || ||||||||||||||||| ||||||||||  |||    
T  33188766 tgtcataccccaaattttgacaactttt-tctatttttatcctttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttcagcaa 33188864  T
Q  358 agaggttactttgaagtacc 377  Q
      ||||||||||||| ||||    
T  33188865 gaaggttactttgaattacc 33188884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 258 - 331
Target Start/End: Original strand, 10638328 - 10638400
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaatttt 331  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||||||||| ||||||||| |||||||||    
T  10638328 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgta-ttttaaagtcgggaatttt 10638400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 3424331 - 3424448
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||| ||||||||||||   |||||| |||||||| || ||| ||||    |||  ||||||||| || ||||||||||| |      
T  3424331 tgtcataccccaaattttgatcatttttctctaattttaccccttttattcttactttaaaagccaagaaagttcgtcgttccagacgaaatttcggc-- 3424428  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  3424429 agaggttactttgaagtacc 3424448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 313 - 363
Target Start/End: Original strand, 12402907 - 12402957
Alignment:
Q  313 ttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaaagaggt 363  Q
    |||||||||  |||||||||||||||||| ||||||||||| || ||||||    
T  12402907 ttttaaagtcaggaattttcgtcgtttcagacgaaatttcggcagagaggt 12402957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 258 - 375
Target Start/End: Original strand, 121228 - 121345
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||  |     
T  121228 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtag 121327  T
Q  358 agaggttactttgaagta 375  Q
    ||||||||||||||||||    
T  121328 agaggttactttgaagta 121345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 10993 - 11112
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||| ||||||| || |||||||||||||||| ||||||||||| ||     
T  10993 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 11092  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  11093 agaggttactttgaagtacc 11112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 149 - 30
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||| | |||    
T  149 tgtcataccccaaattttgaccactttcctctattcttacccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaa 50  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  49 agaggttactttgaagtacc 30  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 84; Significance: 8e-40; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 15813 - 15932
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||  |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||| ||     
T  15813 tgtcataccccaaattttgaccacttttctctatttttacccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcag 15912  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  15913 agaggttactttgaagtacc 15932  T

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Target: scaffold0632 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 4390 - 4509
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||||  ||||||||||| |||||||||||||||| |||||||||||| || ||||||| |||||||| ||||||||||||||     
T  4390 tgtcataccccaaattttgacattttttctctattcttacccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacag 4489  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||||||||||    
T  4490 agaggttactttgaagtacc 4509  T

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Target: scaffold0173 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 994 - 875
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| ||||||||||||  ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| ||     
T  994 tgtcataccccaaattttgaccagctttctctattcttacccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggcag 895  T
Q  358 agaggttactttgaagtacc 377  Q
    | ||||||||||||| ||||    
T  894 aaaggttactttgaaatacc 875  T

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Target: scaffold0039 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 369
Target Start/End: Complemental strand, 40898 - 40787
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||||||| |||| |||||||||||||||||||||||| | | |||||| |||||||| ||||||| |||||||    
T  40898 tgtcataccccaaattttgaccacttttctctattcttatccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaatctcgacaa 40799  T
Q  358 agaggttacttt 369  Q
    ||||||||||||    
T  40798 agaggttacttt 40787  T

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Target: scaffold0016 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 23464 - 23584
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgta-tttttaaagttgggaattttcgtcgtttcaaacgaaatttcgaca 356  Q
    |||||||||| |||||||||||| |||||||||| ||||||||||||||||||| |||||||||| |||||||||| || ||||  |||||||||||  |    
T  23464 tgtcataccccaaattttgaccacttttctctattcttacccattttattcgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggta 23563  T
Q  357 aagaggttactttgaagtacc 377  Q
     ||||||||||||||||||||    
T  23564 gagaggttactttgaagtacc 23584  T

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Target: scaffold0431 (Bit Score: 64; Significance: 7e-28; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 258 - 377
Target Start/End: Original strand, 139 - 258
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| ||||||||||   ||||||||||||||||||||||||||   | |||||||||  ||||| ||||||||||||| |    
T  139 tgtcataccccaaattttgaccacttttctctatttctacccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacga 238  T
Q  358 agaggttactttgaagtacc 377  Q
    |||| |||||||||||||||    
T  239 agagtttactttgaagtacc 258  T

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Target: scaffold0170 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 7255 - 7136
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    ||||||||||||||||||||||| |||||||| |  |||||||||||||| ||| ||||||||  | |||||||||| |||||| |||||||||||  |     
T  7255 tgtcataccctaaattttgaccacttttctctgtttttacccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcgggag 7156  T
Q  358 agaggttactttgaagtacc 377  Q
      ||||||||||||||||||    
T  7155 gaaggttactttgaagtacc 7136  T

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Target: scaffold0222 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 258 - 377
Target Start/End: Complemental strand, 20547 - 20428
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcgacaa 357  Q
    |||||||||| |||||||||||| |||||| |    |||| |||||| |||||| ||||||||  | |||||||||| |||||| ||||||||||| ||     
T  20547 tgtcataccccaaattttgaccacttttctatggttttacacattttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggcag 20448  T
Q  358 agaggttactttgaagtacc 377  Q
    ||||||||||||| ||||||    
T  20447 agaggttactttggagtacc 20428  T

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Target: scaffold0044 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 319
Target Start/End: Complemental strand, 81857 - 81790
Alignment:
Q  252 tacttatgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    ||||| ||||||||||||||||||||||| ||||||||||  |||| |||||| |||||| |||||||    
T  81857 tacttctgtcataccctaaattttgaccacttttctctatttttacacattttgttcgtacttttaaa 81790  T

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Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 93 - 143
Target Start/End: Original strand, 4716 - 4766
Alignment:
Q  93 agtttaacttgtgtggttaaacaaaagagactttttagtttctcatcattg 143  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||||||||    
T  4716 agtttaacttgggtggttaaacaaaagaaacttcttagtttctcatcattg 4766  T

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Target: scaffold0315 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 328 - 377
Target Start/End: Complemental strand, 10651 - 10602
Alignment:
Q  328 ttttcgtcgtttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||| |||| ||||||||||| |||||||||||||||||||||||    
T  10651 ttttcgtcgcttcagacgaaatttcggcaaagaggttactttgaagtacc 10602  T

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Target: scaffold0048 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 257 - 304
Target Start/End: Complemental strand, 7695 - 7648
Alignment:
Q  257 atgtcataccctaaattttgaccatttttctctatccttacccatttt 304  Q
    ||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  7695 atgtcataccccaaattttgaccacttttctctattcttacccatttt 7648  T

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Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 377
Target Start/End: Complemental strand, 65701 - 65650
Alignment:
Q  326 aattttcgtcgtttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||| |||||  |||||||||||||||||| ||||||||||||||||    
T  65701 aattttcgttgtttcggacgaaatttcgacaaagatgttactttgaagtacc 65650  T

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Target: scaffold0027; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 293
Target Start/End: Complemental strand, 65743 - 65708
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatcc 293  Q
    ||||||||||||||||||||||| ||||||||||||    
T  65743 tgtcataccctaaattttgaccacttttctctatcc 65708  T

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Target: scaffold0991 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 438 - 377
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    |||||||||| |||||||||||| ||||||||||  |||| |||||| |||||| |||||||    
T  438 tgtcataccccaaattttgaccacttttctctatttttacacattttgttcgtacttttaaa 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 258 - 353
Target Start/End: Original strand, 416 - 511
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttcg 353  Q
    ||||||||||||||||||||||| |||||| ||   |||| |||||| |||||| |||||||   || ||| | |||||||| | |||||||||||    
T  416 tgtcataccctaaattttgaccacttttctttaattttacacattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttcg 511  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 258 - 352
Target Start/End: Original strand, 192528 - 192622
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaagttgggaattttcgtcgtttcaaacgaaatttc 352  Q
    |||||||||| |||||||||||| ||||||||||  ||||  ||||| |||||| |||||||   || ||| | |||||||| | ||||||||||    
T  192528 tgtcataccccaaattttgaccacttttctctatttttacagattttgttcgtacttttaaaaccggaaatgtccgtcgttttagacgaaatttc 192622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0863 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0863
Description:

Target: scaffold0863; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 319
Target Start/End: Complemental strand, 437 - 376
Alignment:
Q  258 tgtcataccctaaattttgaccatttttctctatccttacccattttattcgtatttttaaa 319  Q
    |||||||||| |||||||||||| |||||| |||  |||| |||||| |||||| |||||||    
T  437 tgtcataccccaaattttgaccacttttctttatttttacacattttgttcgtacttttaaa 376  T

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Target: scaffold0605 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 337 - 377
Target Start/End: Complemental strand, 782 - 742
Alignment:
Q  337 tttcaaacgaaatttcgacaaagaggttactttgaagtacc 377  Q
    ||||||||||||||||||||  |||||||||||| ||||||    
T  782 tttcaaacgaaatttcgacagggaggttactttggagtacc 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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