View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF3594_high_23 (Length: 275)
Name: NF3594_high_23
Description: NF3594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3594_high_23 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 214; Significance: 1e-117; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 4564029 - 4564282
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4564029 |
caagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgac |
4564128 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4564129 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaagggtttattgcaattggccaacccccaagcaaattccaacagttgttttg |
4564228 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
270 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||||||||| | |||||| |
|
|
| T |
4564229 |
gtgtcataactgtaatgcttccaaaattcacataaacaacggatcccggctcct |
4564282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 4602107 - 4602360
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| || |||||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
4602107 |
caagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcatttgtaaactcagatgac |
4602206 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| | |||||||||| |||||||| ||||| || | ||| | | |
|
|
| T |
4602207 |
aaaatcactgagccaccaatgacaagatcaggcctaatgatccacaaaaatggtttatggcaattggccaaaccccaagcgaattctaataattgatggg |
4602306 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
270 |
Q |
| |
|
|||||| |||||||||||| || |||||||||||||||||||||| | |||||| |
|
|
| T |
4602307 |
gtgtcataactgtaatgctgccaaaattcacataaacaacggatcccggctcct |
4602360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 17 - 270
Target Start/End: Original strand, 4617340 - 4617593
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||| |||| ||||||||||| ||||||||| |||||||||||| |
|
|
| T |
4617340 |
caagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgctattaggcctctatctgcaatttcatttgtaaactcagatgag |
4617439 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||| |||||||||||||||| ||| ||| |||||||||| |||||||||||||||| | ||| || | |
|
|
| T |
4617440 |
aaaatcactgagccaccaatgacaagatcaggccttatgatccacaaaaatgatttcttgcaattggccaaaccccaagcaaattccagtaattgctcgg |
4617539 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
270 |
Q |
| |
|
|||||| |||||||||||| |||||||||||||||||||| |||| | |||||| |
|
|
| T |
4617540 |
gtgtcataactgtaatgctgccgaaattcacataaacaactgatcccggctcct |
4617593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 4514935 - 4514753
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||| || |
|
|
| T |
4514935 |
caagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaatttcattcacaaactcagacgac |
4514836 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaa |
199 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||||||||||| ||||| | ||| ||| ||||||||| ||||||||||| |
|
|
| T |
4514835 |
aaaaccactgagccaccaatgacaagatcaggcctaatgatccataaaaaggttttcttgctattggccaaaccccaagcaaa |
4514753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 4592549 - 4592791
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||||| || |||| ||| || |||||||| || || |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4592549 |
caagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattacgcctctatctgaaatttcattcacaaactccgatgac |
4592648 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| | || ||||||||||||||| ||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| || |||| || ||| |
|
|
| T |
4592649 |
aaaacaattgtgccaccaatgacaagatcaggcctaatgatccacaaaaaaggtttattgcaattggccaaaccccaagcaaactctaacattttctctt |
4592748 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
259 |
Q |
| |
|
||| |||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
4592749 |
cattcataactgtaaggctgccgaaattcacataaacaacgga |
4592791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 17 - 259
Target Start/End: Complemental strand, 4613532 - 4613290
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| |||||||||||||| || |||| ||| || |||||||| || || |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4613532 |
caagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaatttcattcacaaactctgatgac |
4613433 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||| ||| ||| ||||| ||||||||||| || || |||| ||||| |
|
|
| T |
4613432 |
aaaacaactgagccgccaatgacaagatcaggcctaatgatccacaaaaagggttgcttgctattcgccaaaccccaagcaaactctaatagtttttctg |
4613333 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
259 |
Q |
| |
|
|||| ||| || ||||| || |||||||||||||||||||| |
|
|
| T |
4613332 |
cagtcataacggtcatgctcccaaaattcacataaacaacgga |
4613290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 3172059 - 3172241
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| |||||||| |||||||| |||||||| || |||||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
3172059 |
caagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgctattaggcctctatctgaaatttcattcacaaactccgatgac |
3172158 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaa |
199 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||| ||||||||||| ||||| ||| ||||| || ||||||||||| |
|
|
| T |
3172159 |
aaaacaaccgagccaccaatgacaagatcaggcctaataatccacaaaaagggtttcttgctgttggctaaaccccaagcaaa |
3172241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 4598490 - 4598728
Alignment:
| Q |
18 |
aagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgata |
117 |
Q |
| |
|
|||||||| || |||||||| ||||| || |||| ||| || ||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| | |
|
|
| T |
4598490 |
aagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaatttcattcacaaactccgatgaca |
4598589 |
T |
|
| Q |
118 |
aaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctgg |
217 |
Q |
| |
|
|||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||| || |||| | ||||| |
|
|
| T |
4598590 |
aaacaaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaagtctaacaacttttctgc |
4598689 |
T |
|
| Q |
218 |
tgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
|||| || || ||||| || ||||||||||||||||| |
|
|
| T |
4598690 |
agtcatcaccgttatgctcccaaaattcacataaacaac |
4598728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 270
Target Start/End: Complemental strand, 4299635 - 4299382
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||||||| |||| || ||||||||| | ||||| ||| |||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
4299635 |
caagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggttaggcctctatttgaaatttcattctcaaactcagatgac |
4299536 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| | |||| |||||||||||||| |||||||||||||||||||||||||| || |||||||||| |||||||||| || |||||||| |||| |
|
|
| T |
4299535 |
aaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaatggtttcctgcaattggccaaaccccaagcaatctctaacagttgctctg |
4299436 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
270 |
Q |
| |
|
| |||| |||||||| ||| || ||||||||||||||||| |||| | |||||| |
|
|
| T |
4299435 |
gagtcataactgtaacgctgccaaaattcacataaacaaccgatcccggctcct |
4299382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 4461441 - 4461685
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||||||| |||| ||| || |||||||| ||||| |||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4461441 |
caagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaatttcattcacaaactcagatgac |
4461540 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| | ||||| ||||||||||| ||||||||||||||||| ||||| ||||| ||| || ||||| ||||||||||| || |||||||| || | |
|
|
| T |
4461541 |
aaaataaacgagccgccaatgacaagatcaggcctaatgatccataaaaagggtttcttgctatcagccaaaccccaagcaaactctaacagttgatcag |
4461640 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
261 |
Q |
| |
|
| |||| |||||| ||||| || ||||| ||||| ||||| |||| |
|
|
| T |
4461641 |
gagtcataactgtgatgctgccaaaatttacatagacaacagatc |
4461685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 17 - 253
Target Start/End: Original strand, 4516639 - 4516875
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || | |||||| |||||||| |||||||| || |||||||| ||||| |||| ||||||||| ||| ||||||||||||| || ||||| |
|
|
| T |
4516639 |
caagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagtttcattcacaaaatcggatgac |
4516738 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||| |||||||| || || |||||||| |||| |
|
|
| T |
4516739 |
aaaataaccgagccaccaatgacaaggtcaggcctaataatccacaaaaaaggtttcttgctgttggccaaaccccaagcgaactctaacagttgatctg |
4516838 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaac |
253 |
Q |
| |
|
| |||| || || |||||||| |||||||||||||| |
|
|
| T |
4516839 |
gagtcatgaccgtgatgcttccaaaattcacataaac |
4516875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 4571290 - 4571532
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||| || || |||||||| |||||||| |||||||| || | ||||||| ||||||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4571290 |
caagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaatttcattcacaaactccgatgac |
4571389 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| |||||||||||||||||||| || |||||||||||||||||||| ||| ||| ||| || || ||||| ||||| || ||||||| ||||| |
|
|
| T |
4571390 |
aaaacaactgagccaccaatgacaagatcgggcctaatgatccacaaaaagagttgcttgctatttgctaaaccccatgcaaactctaacagtttttctg |
4571489 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
259 |
Q |
| |
|
|||| |||||| |||| || |||||||||||||||||||| |
|
|
| T |
4571490 |
aagtcataactgtcctgctcccaaaattcacataaacaacgga |
4571532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 4574626 - 4574808
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || | |||| |||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
4574626 |
caagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgag |
4574725 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaa |
199 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||||||||||| |
|
|
| T |
4574726 |
aaaaccaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggttttttgctgttggccaaaccccaagcaaa |
4574808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 4481011 - 4481255
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||| ||||||||| |||| | |||||||||| |
|
|
| T |
4481011 |
caagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgctattaggcctctatttgaaatttctttcaaatactcagatgac |
4481110 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|| || |||||||||||||||||||| | || |||||| ||||||||||| ||| ||| |||||| || ||||||||||| || || |||| ||| |
|
|
| T |
4481111 |
aacaccactgagccaccaatgacaagattagacctaataatccacaaaaagttttttttgctattggcaaaaccccaagcaaactctaagagtttctctt |
4481210 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
261 |
Q |
| |
|
| | || || ||| ||||| || ||||| ||||||||||| |||| |
|
|
| T |
4481211 |
gagacataattgtgatgctgccaaaatttacataaacaacagatc |
4481255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 4560824 - 4561005
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || | ||| ||||||||||| |||||||| ||||||||||||||||| |||| ||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
4560824 |
caagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaa-tcagatgag |
4560922 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaa |
199 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||| |
|
|
| T |
4560923 |
aaaaccaccgagccaccaatgacaagatcaggcctaatgatccataaaaatggtttcttgctgttggccaaaccccaagcaaa |
4561005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 262
Target Start/End: Complemental strand, 4266980 - 4266735
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || || |||||||||||||| ||||| || ||||||||||||||||| |||| ||||||||||||||||| || | ||| |||||||| |
|
|
| T |
4266980 |
caagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgctattagtcctctatctgaaatttctttaaaaaaatcagatgac |
4266881 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||||||| ||||||||||| || || ||| |||||||| ||||||||||| || || || | ||| |
|
|
| T |
4266880 |
aaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctgttggccaaaccccaagcaaactctaagagcttctctc |
4266781 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatct |
262 |
Q |
| |
|
||| || |||||| ||||| || ||||| ||||||||||| ||||| |
|
|
| T |
4266780 |
gtgacataactgtgatgctaccaaaatttacataaacaacagatct |
4266735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 17 - 252
Target Start/End: Original strand, 4457912 - 4458148
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||| |||||||||||||| ||| ||||||||||||| || ||||| |
|
|
| T |
4457912 |
caagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctattaagcctctatcagaagtttcattcacaaaatccgatgac |
4458011 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatgg-tttattgtaattggccaacccccaagcaaattccaacagttgttct |
215 |
Q |
| |
|
||||| || ||||||||||||||||| ||||||||| | ||||||||||| || ||| ||| |||||||| ||||||||||||| || || | ||| |
|
|
| T |
4458012 |
aaaacaaccgagccaccaatgacaagatcaggcctagttatccacaaaaaaggttttcttgctgttggccaaaacccaagcaaattctaagagcttctct |
4458111 |
T |
|
| Q |
216 |
ggtgtcaaaactgtaatgcttccgaaattcacataaa |
252 |
Q |
| |
|
| | || |||||| |||||||| ||||| ||||||| |
|
|
| T |
4458112 |
tgagacataactgtgatgcttccaaaatttacataaa |
4458148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 4506175 - 4506414
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||| || || |||||||| |||| |||||| ||||| || | || |||||||||||||||||| ||||||| || || |
|
|
| T |
4506175 |
caagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgctataaggcttctatctgaaatttcatttgcaaactctgaagac |
4506274 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||| || || | || || | |
|
|
| T |
4506275 |
aaaaccactgagccaccaattacaagatcaggcctaatgatccacaaaaagggtttcttgctattggccaaaccccaagcaaactctaaaaatttctccg |
4506374 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
| | || || ||| |||||||| ||||||||||||||||| |
|
|
| T |
4506375 |
gagacataattgtgatgcttccaaaattcacataaacaac |
4506414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 4557443 - 4557685
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||| ||||| || |||| ||| || || ||||| | || |||| ||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
4557443 |
caagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaatttcattgacaaactccgatgac |
4557542 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| ||||||||||| |||||||| || |||||||||||||||||||| |||| ||| ||| || || ||||| ||||| || ||||||| ||||| |
|
|
| T |
4557543 |
aaaacaactgagccaccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactctaacagtttttctg |
4557642 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
259 |
Q |
| |
|
|||| |||||| ||||| || |||||||||||||||||||| |
|
|
| T |
4557643 |
ccgtcataactgtcatgctcccaaaattcacataaacaacgga |
4557685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 259
Target Start/End: Original strand, 4585954 - 4586196
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||| ||| || || ||||||| || |||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
4585954 |
caagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaatttcattcttaaactcagatgac |
4586053 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| | || |||||||||||||| ||||| ||||||||||| ||||| ||| ||| ||||||||| ||||||||||| || || |||| ||||| |
|
|
| T |
4586054 |
aaaaccaaggaaccaccaatgacaagatcaggtctaatgatccataaaaaatgttgcttgctattggccaaaccccaagcaaactctaatagtttttctg |
4586153 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
259 |
Q |
| |
|
|||| |||||| |||| || |||||||||||||||||||| |
|
|
| T |
4586154 |
tagtcataactgttgtgctcccaaaattcacataaacaacgga |
4586196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 4622460 - 4622698
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||| ||||||||| | |||| ||| ||||||||||||| ||| |||| ||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
4622460 |
caagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgcgattaggcctctacctgaaatttcattctcaaactcagatgac |
4622559 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| | ||||| || |||||||||||||||||||||||||||||||| ||||| ||| || ||||| ||||||||||| || || ||||| ||| |
|
|
| T |
4622560 |
aaaataaacgagccgcccatgacaaggtcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactctaatagttgatctc |
4622659 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaa |
255 |
Q |
| |
|
| |||| ||||||||||| || |||||||| ||||||| |
|
|
| T |
4622660 |
gagtcatcactgtaatgctgccaaaattcacgtaaacaa |
4622698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 18 - 256
Target Start/End: Original strand, 4626270 - 4626508
Alignment:
| Q |
18 |
aagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgata |
117 |
Q |
| |
|
|||||||| || |||||||| ||||||| |||||||| || |||||||| ||||| |||| |||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
4626270 |
aagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaatttcattctcaaactcggatgacg |
4626369 |
T |
|
| Q |
118 |
aaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctgg |
217 |
Q |
| |
|
||| | |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| || ||||| ||||||||||| || ||||||| | ||| |
|
|
| T |
4626370 |
aaataaatgagccaccaatcacaagatcaggcctaatgatccacaaaaagggtttcttgctatcagccaaaccccaagcaaactctaacagtttctgtgg |
4626469 |
T |
|
| Q |
218 |
tgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
|||| |||| ||| ||| || || |||||||||||||| |
|
|
| T |
4626470 |
agtcataactataacgctgccaaagttcacataaacaac |
4626508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 261
Target Start/End: Complemental strand, 4504211 - 4503967
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||| | | ||||||| ||| ||||||||||||| |||||||| |
|
|
| T |
4504211 |
caagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgctacaagtcctctattagaagtttcattcacaaaatcagatgac |
4504112 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|| || ||||||||||||| ||||| ||||||||||| ||||||||||| ||||| ||| ||||||||| ||||||||||| || |||| || ||| |
|
|
| T |
4504111 |
aacacctctgagccaccaataacaagatcaggcctaataatccacaaaaaaggtttcttgctattggccaaaccccaagcaaactctaacaatttatctt |
4504012 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
261 |
Q |
| |
|
| || |||||||||||| || ||||| ||||||||||| |||| |
|
|
| T |
4504011 |
aagacataactgtaatgctgccaaaatttacataaacaacagatc |
4503967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 4579750 - 4579989
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||||||| |||| ||| || |||||||| || | |||| |||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4579750 |
caagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaatttcattcacaaactccgatgac |
4579849 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| ||||||| || |||||||| || |||||||||||||||||||| |||| ||| ||| || || ||||| ||||| || ||||||| ||||| |
|
|
| T |
4579850 |
aaaacagctgagccgccgatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgctaaaccccatgcaaactctaacagtttttctg |
4579949 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
|||| |||||| | ||| || ||||||||||||||||| |
|
|
| T |
4579950 |
cagtcataactgtcaagctcccaaaattcacataaacaac |
4579989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 256
Target Start/End: Complemental strand, 4259967 - 4259729
Alignment:
| Q |
18 |
aagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgata |
117 |
Q |
| |
|
|||||||| || | ||||| |||||||| |||| ||| || |||||||| || || |||| ||||||||| ||||||||| || ||||||||||||| | |
|
|
| T |
4259967 |
aagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaatttcactctcaaactcagatgaca |
4259868 |
T |
|
| Q |
118 |
aaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctgg |
217 |
Q |
| |
|
||| | ||||||||||| | |||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||||| || || | ||| ||||| |
|
|
| T |
4259867 |
aaataaaggagccaccaataatgaggtcaggcctaatgatccacaaaaagggtttcttgctattggccaatccccaagcaaactctaaaaattgatctgg |
4259768 |
T |
|
| Q |
218 |
tgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
|||| |||||||||||| || |||||||| |||||||| |
|
|
| T |
4259767 |
agtcataactgtaatgctgccaaaattcacgtaaacaac |
4259729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 4490169 - 4489987
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||| ||||| || ||||| ||||||||||||||||| |||| ||||||||||||||||| |||| ||| |||||||| |
|
|
| T |
4490169 |
caagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaatttctttcaaaaaatcagatgac |
4490070 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaa |
199 |
Q |
| |
|
|| || |||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||||| ||||| |
|
|
| T |
4490069 |
aacacctgtgagccaccaataacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaa |
4489987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 104 - 256
Target Start/End: Complemental strand, 4256351 - 4256199
Alignment:
| Q |
104 |
aaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattcc |
203 |
Q |
| |
|
|||||||||||| |||| | |||||||||||||| ||||||||||||||||| |||||||||||||| ||| ||||||||| ||||||||||| || |
|
|
| T |
4256351 |
aaactcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatacacaaaaatggtttcttgctattggccaatccccaagcaaactct |
4256252 |
T |
|
| Q |
204 |
aacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
|||||||| ||||| |||| |||||||||||| || |||||||| |||||||| |
|
|
| T |
4256251 |
aacagttgatctggagtcataactgtaatgctgccaaaattcacgtaaacaac |
4256199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 4470121 - 4470365
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||||||| |||| ||| || |||||||| | | |||| |||||||||||||||| |||| |||| ||| ||||| |
|
|
| T |
4470121 |
caagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaattccatttacaatctctgatgag |
4470220 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| || ||||| ||||||||||| || |||||||||||||||||||| |||| ||| ||| ||||| ||||||||||| || ||||||| |||| |
|
|
| T |
4470221 |
aaaactaccgagccgccaatgacaagatcgggcctaatgatccacaaaaagggttgcttgctatttgccaaaccccaagcaaactctaacagtttctctg |
4470320 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
261 |
Q |
| |
|
| | || |||||| | ||| |||||||| ||||| ||||| |||| |
|
|
| T |
4470321 |
gagacataactgtgacgctgccgaaatttacatagacaacagatc |
4470365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 32 - 172
Target Start/End: Original strand, 4568389 - 4568529
Alignment:
| Q |
32 |
tgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagcca |
131 |
Q |
| |
|
||||||||||||||| |||| ||| || |||||||| ||||| ||| ||||||||| ||| || ||||||||||||| ||||| |||| ||||||||| |
|
|
| T |
4568389 |
tgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttccattcacaaactcggatgacaaaataactgagcca |
4568488 |
T |
|
| Q |
132 |
ccaatgacaaggtcaggcctaatgatccacaaaaatggttt |
172 |
Q |
| |
|
||||||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
4568489 |
ccaatgacaagctaaggcctaatgatccacaaaaaaggttt |
4568529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 4493273 - 4493346
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctg |
90 |
Q |
| |
|
||||||||| || || ||| ||||||||| | |||||| |||||||||||||| ||||||| ||||||||||| |
|
|
| T |
4493273 |
caagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 81 - 160
Target Start/End: Complemental strand, 4391873 - 4391794
Alignment:
| Q |
81 |
cctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatcca |
160 |
Q |
| |
|
||||||||||||||||||||| || ||||| || | ||||| ||| | ||||||||||||||| ||||||||||||| |
|
|
| T |
4391873 |
cctctatctgaaatttcattctcatactcatataacaaaacacatgacctgccaatgacaaggtcaagcctaatgatcca |
4391794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 139; Significance: 8e-73; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 17 - 263
Target Start/End: Original strand, 1281432 - 1281678
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||||| |||| |||||||| |
|
|
| T |
1281432 |
caagaatccaccgattgaagggtggttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaatttcattcgcaaagtcagatgac |
1281531 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| ||| ||| |||| ||||||||||||||| ||||| |||| |
|
|
| T |
1281532 |
aaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttcttgctattagccagaccccaagcaaattcctgaagttgctctg |
1281631 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctc |
263 |
Q |
| |
|
| |||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1281632 |
gagtcataactgtaatgcttccgaaattcacataaacaacagatctc |
1281678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 137; Significance: 1e-71; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 261
Target Start/End: Original strand, 1674544 - 1674788
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||| |||| |||||||||||||||||| |||| |||||||||||| |
|
|
| T |
1674544 |
caagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcataaactcagatgac |
1674643 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| ||| |||||| ||||||||||| ||||| ||||| |||| |
|
|
| T |
1674644 |
aaaaccactgagccaccaatgacaagatcaggcctagtgatccacaaaaaaggtttcttgcaatcggccaaaccccaagcaaactccaatagttgatctg |
1674743 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
261 |
Q |
| |
|
| |||| ||| ||||||| |||||||||||||||||||| |||| |
|
|
| T |
1674744 |
gagtcataacaataatgctaccgaaattcacataaacaaccgatc |
1674788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 21 - 199
Target Start/End: Complemental strand, 20863653 - 20863475
Alignment:
| Q |
21 |
aatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgataaaa |
120 |
Q |
| |
|
||||| || |||||||| |||||||| || ||||| |||||||||||||| || |||| |||||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
20863653 |
aatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgcgattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaa |
20863554 |
T |
|
| Q |
121 |
cgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaa |
199 |
Q |
| |
|
|| ||||||||||||||||| ||||||||||||||||||||||| ||||| ||| |||||||| ||||| ||||| |
|
|
| T |
20863553 |
tcaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttcttgctgttggccaaaccccatgcaaa |
20863475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 259
Target Start/End: Complemental strand, 16686080 - 16685839
Alignment:
| Q |
18 |
aagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgata |
117 |
Q |
| |
|
|||||||| || |||||||| ||||| || |||| ||| || || ||||| || || |||| || ||||||||| ||||||||| |||||||||||| | |
|
|
| T |
16686080 |
aagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagatttcattcttaaactcagatgaca |
16685981 |
T |
|
| Q |
118 |
aaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctgg |
217 |
Q |
| |
|
|||| || || || | ||||||||| |||| |||||||||||| ||| ||| ||| ||||| ||| ||||||||||| || || |||| ||||| |
|
|
| T |
16685980 |
aaaccacggaaccgcaaatgacaagatcagacctaatgatccattgaaaatgttgcttgctattggtcaaaccccaagcaaactctaatagtttttctgc |
16685881 |
T |
|
| Q |
218 |
tgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
259 |
Q |
| |
|
|||| |||||| ||||| || |||||||||||||||||||| |
|
|
| T |
16685880 |
agtcataactgtcatgctcccaaaattcacataaacaacgga |
16685839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 4500 - 4261
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||||||| |||| ||| ||||||||||| || ||||||| |||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4500 |
caagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaattaggcctctatctgaaatttcattctcaaactcagatgac |
4401 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| | ||||| ||||||||||||||||||||||||||||||||||| | ||| || |||||| ||| |||||||||| || |||||||| |||| |
|
|
| T |
4400 |
aaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttcttacaattggtcaaaacccaagcaaactctaacagttgatctg |
4301 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
| |||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4300 |
gagtcataactgtaatgcttccaaaattcacataaacaac |
4261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 256
Target Start/End: Complemental strand, 3533 - 3294
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || |||||||||||| ||| |||| ||| ||||||||||| |||| |||| |||||||||||||||||||||| |||| || ||||| |
|
|
| T |
3533 |
caagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaatttcattctcaaattctgatgac |
3434 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
|||| | ||||| ||||||||||| ||||||||||||||||||||||| ||||| ||| || |||||| |||||||||||||| |||||||| | || |
|
|
| T |
3433 |
aaaataaacgagccgccaatgacaagatcaggcctaatgatccacaaaaacggtttcttgctatcggccaaaccccaagcaaattctaacagttgatttg |
3334 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
| |||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
3333 |
gagtcataactgtaatgctgccgaaattcacataaacaac |
3294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 256
Target Start/End: Original strand, 3086738 - 3086977
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || ||||||||||| ||||| |||| ||| || |||||||| ||||| |||| ||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
3086738 |
caagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaatttctttctcaaactcagatgac |
3086837 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
| || | ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| || || ||||| ||| |
|
|
| T |
3086838 |
ataataaaggagccgccaatgacaagatcaggcctaatgatccacaaaaatggtttcttgctattggccaaaccccaagcaaactctaatagttgctctt |
3086937 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaac |
256 |
Q |
| |
|
| |||| |||||||||||| || ||| ||||||||||||| |
|
|
| T |
3086938 |
gagtcataactgtaatgctgccaaaactcacataaacaac |
3086977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 93; Significance: 2e-45; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 17 - 185
Target Start/End: Complemental strand, 27999913 - 27999745
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||| ||| |||||||||||| |
|
|
| T |
27999913 |
caagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattaggcctctatctgaaatttctttcctaaactcagatgac |
27999814 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggcc |
185 |
Q |
| |
|
||||| |||||||||||||||||||| | ||||||| ||||||||||||| ||||| ||| |||||||| |
|
|
| T |
27999813 |
aaaaccactgagccaccaatgacaagattaggcctagtgatccacaaaaaaggtttcttgcaattggcc |
27999745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 262
Target Start/End: Original strand, 24103317 - 24103562
Alignment:
| Q |
17 |
caagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaatttcattcacaaactcagatgat |
116 |
Q |
| |
|
||||||||| || || ||||||||||| || ||||| || ||||||||||||||||| |||| ||||||||||||| ||| || | ||| |||||||| |
|
|
| T |
24103317 |
caagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgctattagtcctctatctgaaacttctttaaaaaaatcagatgac |
24103416 |
T |
|
| Q |
117 |
aaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagcaaattccaacagttgttctg |
216 |
Q |
| |
|
||||| |||||||| ||||||||||| ||||||||||| ||||||||||| || || ||| ||||||||| ||||||||||| || || || | ||| |
|
|
| T |
24103417 |
aaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttcttgctattggccaaaccccaagcaaactctaagagcttctctc |
24103516 |
T |
|
| Q |
217 |
gtgtcaaaactgtaatgcttccgaaattcacataaacaacggatct |
262 |
Q |
| |
|
||| || |||||| ||||| || ||||| ||||||||||| ||||| |
|
|
| T |
24103517 |
gtgacataactgtgatgctaccaaaatttacataaacaactgatct |
24103562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 172
Target Start/End: Complemental strand, 3260 - 3168
Alignment:
| Q |
80 |
gcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttt |
172 |
Q |
| |
|
||||||||||||| |||||||| |||||||| || | ||| | ||| || |||||||||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
3260 |
gcctctatctgaagtttcattctcaaactcatataacaaagcacatgatccgccaatgacaaggtcagacctaatgatccacacaaagggttt |
3168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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