View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3594_high_30 (Length: 250)
Name: NF3594_high_30
Description: NF3594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3594_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 14 - 243
Target Start/End: Complemental strand, 37460838 - 37460610
Alignment:
| Q |
14 |
agacaggtgtttaattattatactgagctaaaaaatgggggtaaaacaacgttttaaattgccgttcgcaatctcatttgtgaccataagatcatcaatt |
113 |
Q |
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| T |
37460838 |
agacaggtgtttaattattatactgagctaaaaaatgggggtaaaacaacgttttaaattgccgttcgcaatctcatttgtgaccataagatcgtcaatt |
37460739 |
T |
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| Q |
114 |
ttgagacctctgagactgcatcaactgcatttgtctatagtttttcgcaatactaatcctttgttcaacaaatacggtacatgaatctaaatttcatgag |
213 |
Q |
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| T |
37460738 |
ttgagacctctgagactgcatcaactgcatttgtctataatttttcgcaatactaatcctttgttcaacaaat-tggtacatgaatctaaatttcatgag |
37460640 |
T |
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| Q |
214 |
tttatggacctcattgcaactatataaaac |
243 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
37460639 |
tttatggacctcattgcaactatataaaac |
37460610 |
T |
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