View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3594_low_34 (Length: 243)

Name: NF3594_low_34
Description: NF3594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3594_low_34
NF3594_low_34
[»] chr2 (36 HSPs)
chr2 (17-156)||(39616782-39616921)
chr2 (159-243)||(29940945-29941029)
chr2 (165-243)||(45546937-45547015)
chr2 (151-243)||(6289501-6289591)
chr2 (157-243)||(11534833-11534919)
chr2 (156-243)||(20157757-20157844)
chr2 (184-243)||(24193574-24193633)
chr2 (157-242)||(2288459-2288542)
chr2 (157-243)||(34028933-34029019)
chr2 (160-240)||(2372970-2373050)
chr2 (156-243)||(11998417-11998504)
chr2 (161-243)||(45485364-45485445)
chr2 (159-228)||(25343220-25343289)
chr2 (159-240)||(27090635-27090716)
chr2 (149-203)||(21736645-21736699)
chr2 (157-242)||(15284533-15284618)
chr2 (184-241)||(22552000-22552057)
chr2 (181-234)||(26601444-26601497)
chr2 (184-241)||(43078591-43078648)
chr2 (184-236)||(16269607-16269659)
chr2 (148-238)||(12407260-12407350)
chr2 (159-242)||(18176470-18176553)
chr2 (159-234)||(37981622-37981697)
chr2 (152-234)||(19144908-19144990)
chr2 (184-241)||(378895-378952)
chr2 (185-234)||(1789359-1789408)
chr2 (158-203)||(14920621-14920666)
chr2 (170-243)||(24193486-24193559)
chr2 (184-241)||(26788700-26788757)
chr2 (184-241)||(28844471-28844528)
chr2 (185-241)||(215462-215518)
chr2 (205-241)||(6224701-6224737)
chr2 (184-236)||(14198818-14198870)
chr2 (211-243)||(22551914-22551946)
chr2 (184-236)||(24776271-24776323)
chr2 (184-236)||(32125166-32125218)
[»] chr3 (54 HSPs)
chr3 (154-243)||(26555809-26555898)
chr3 (157-243)||(36055007-36055093)
chr3 (154-243)||(19552148-19552237)
chr3 (147-243)||(50900447-50900544)
chr3 (160-243)||(35730933-35731016)
chr3 (158-243)||(24150832-24150917)
chr3 (155-243)||(30588835-30588923)
chr3 (158-243)||(38629800-38629885)
chr3 (159-243)||(38682426-38682510)
chr3 (157-243)||(52024199-52024286)
chr3 (157-239)||(13662546-13662628)
chr3 (161-243)||(26293567-26293649)
chr3 (156-240)||(26005986-26006070)
chr3 (158-243)||(53184073-53184158)
chr3 (156-243)||(27593149-27593236)
chr3 (156-243)||(46252203-46252290)
chr3 (170-243)||(36785982-36786055)
chr3 (159-240)||(25713442-25713523)
chr3 (171-242)||(10105015-10105086)
chr3 (171-242)||(10216162-10216233)
chr3 (171-242)||(10225791-10225862)
chr3 (158-221)||(45926971-45927034)
chr3 (160-242)||(10225670-10225752)
chr3 (158-243)||(39338297-39338383)
chr3 (162-243)||(4272110-4272191)
chr3 (164-240)||(6784104-6784180)
chr3 (159-227)||(10067700-10067768)
chr3 (184-236)||(35337649-35337701)
chr3 (179-242)||(46749271-46749334)
chr3 (154-236)||(996325-996407)
chr3 (151-241)||(6035287-6035377)
chr3 (160-234)||(10104902-10104976)
chr3 (160-234)||(10216049-10216123)
chr3 (183-241)||(23753621-23753679)
chr3 (184-241)||(10660449-10660506)
chr3 (184-241)||(31646519-31646576)
chr3 (184-241)||(36674365-36674422)
chr3 (185-238)||(38772292-38772345)
chr3 (184-241)||(52618200-52618257)
chr3 (211-243)||(996235-996267)
chr3 (184-236)||(3206436-3206488)
chr3 (205-241)||(6035204-6035240)
chr3 (185-241)||(11431441-11431497)
chr3 (205-241)||(12103648-12103684)
chr3 (184-236)||(12734080-12734132)
chr3 (184-236)||(19253741-19253793)
chr3 (185-241)||(20832910-20832966)
chr3 (211-243)||(25418391-25418423)
chr3 (185-241)||(27240478-27240534)
chr3 (184-236)||(37820717-37820769)
chr3 (205-241)||(44276408-44276444)
chr3 (184-236)||(44762277-44762329)
chr3 (185-241)||(44906748-44906804)
chr3 (211-243)||(52114553-52114585)
[»] chr8 (38 HSPs)
chr8 (156-243)||(1606013-1606100)
chr8 (156-243)||(42274969-42275056)
chr8 (159-243)||(2112791-2112875)
chr8 (156-243)||(29260276-29260363)
chr8 (158-243)||(43605364-43605449)
chr8 (153-243)||(4655041-4655131)
chr8 (157-243)||(40265281-40265367)
chr8 (159-243)||(28619843-28619927)
chr8 (157-240)||(9457541-9457624)
chr8 (158-243)||(41386870-41386956)
chr8 (163-234)||(7148050-7148121)
chr8 (152-243)||(10802771-10802862)
chr8 (158-243)||(35142041-35142126)
chr8 (153-236)||(30382681-30382764)
chr8 (154-243)||(37567363-37567452)
chr8 (158-243)||(9209035-9209120)
chr8 (158-243)||(40013472-40013555)
chr8 (178-236)||(4302815-4302873)
chr8 (185-243)||(8502657-8502715)
chr8 (157-234)||(42366048-42366125)
chr8 (181-236)||(24214830-24214885)
chr8 (182-240)||(14723955-14724013)
chr8 (184-241)||(10295615-10295672)
chr8 (159-240)||(24296655-24296736)
chr8 (156-236)||(5576860-5576940)
chr8 (186-242)||(14061573-14061629)
chr8 (181-236)||(2705058-2705113)
chr8 (156-202)||(17790433-17790479)
chr8 (154-236)||(23115407-23115489)
chr8 (184-241)||(14782369-14782426)
chr8 (181-238)||(24502008-24502065)
chr8 (184-241)||(44726044-44726101)
chr8 (185-241)||(7466251-7466307)
chr8 (184-236)||(7507138-7507190)
chr8 (184-236)||(26373720-26373772)
chr8 (185-241)||(39467701-39467757)
chr8 (184-236)||(41479012-41479064)
chr8 (184-236)||(42735516-42735568)
[»] chr5 (22 HSPs)
chr5 (154-243)||(40410585-40410674)
chr5 (152-243)||(17518420-17518512)
chr5 (161-243)||(10571113-10571195)
chr5 (157-236)||(6828799-6828878)
chr5 (152-242)||(28594443-28594534)
chr5 (159-229)||(27786210-27786280)
chr5 (159-240)||(7857025-7857106)
chr5 (171-242)||(26795634-26795705)
chr5 (158-242)||(9689337-9689421)
chr5 (171-242)||(26806698-26806769)
chr5 (160-242)||(26806577-26806659)
chr5 (156-242)||(39753432-39753518)
chr5 (183-241)||(7948551-7948609)
chr5 (160-234)||(26795521-26795595)
chr5 (184-241)||(4550491-4550548)
chr5 (184-241)||(14000339-14000396)
chr5 (159-236)||(33656282-33656359)
chr5 (162-242)||(2276206-2276286)
chr5 (184-236)||(6460707-6460759)
chr5 (184-236)||(7016936-7016988)
chr5 (205-241)||(13925951-13925987)
chr5 (185-241)||(37013830-37013886)
[»] scaffold0016 (1 HSPs)
scaffold0016 (157-243)||(81782-81868)
[»] chr7 (31 HSPs)
chr7 (157-243)||(151856-151942)
chr7 (157-243)||(27418642-27418728)
chr7 (157-240)||(47915060-47915143)
chr7 (163-243)||(30110807-30110887)
chr7 (157-243)||(40097092-40097178)
chr7 (166-243)||(43057681-43057758)
chr7 (185-243)||(35090106-35090164)
chr7 (159-240)||(31494239-31494320)
chr7 (159-242)||(3634213-3634296)
chr7 (152-195)||(43057836-43057879)
chr7 (160-243)||(39301245-39301329)
chr7 (154-241)||(7993021-7993108)
chr7 (153-203)||(12253431-12253481)
chr7 (159-240)||(24939652-24939733)
chr7 (184-241)||(28342256-28342313)
chr7 (184-236)||(8078311-8078363)
chr7 (184-236)||(34695147-34695199)
chr7 (156-203)||(33474515-33474562)
chr7 (154-236)||(44343635-44343717)
chr7 (152-242)||(46037351-46037441)
chr7 (184-241)||(23101207-23101264)
chr7 (184-241)||(37327836-37327893)
chr7 (184-241)||(41827223-41827280)
chr7 (159-240)||(47031245-47031326)
chr7 (184-241)||(48117827-48117884)
chr7 (184-236)||(509607-509659)
chr7 (205-241)||(3022940-3022976)
chr7 (184-236)||(18914974-18915026)
chr7 (185-241)||(21067792-21067848)
chr7 (185-241)||(29614998-29615054)
chr7 (153-241)||(39027975-39028063)
[»] chr1 (34 HSPs)
chr1 (157-243)||(45318458-45318544)
chr1 (158-243)||(26882826-26882911)
chr1 (159-243)||(52705393-52705477)
chr1 (157-243)||(36402245-36402331)
chr1 (158-243)||(1928404-1928489)
chr1 (158-243)||(10896799-10896884)
chr1 (159-234)||(9831299-9831374)
chr1 (159-234)||(27198271-27198346)
chr1 (157-236)||(42657712-42657791)
chr1 (161-243)||(29208757-29208839)
chr1 (154-242)||(19007580-19007668)
chr1 (156-243)||(33243310-33243397)
chr1 (156-243)||(33263483-33263570)
chr1 (154-242)||(14555312-14555400)
chr1 (159-240)||(9191131-9191212)
chr1 (159-236)||(34772311-34772388)
chr1 (156-236)||(6304494-6304574)
chr1 (184-236)||(19452090-19452142)
chr1 (184-236)||(38536287-38536339)
chr1 (184-236)||(38558505-38558557)
chr1 (186-238)||(50192789-50192841)
chr1 (156-242)||(14229052-14229139)
chr1 (181-236)||(22183275-22183330)
chr1 (184-241)||(6312482-6312539)
chr1 (184-241)||(8141363-8141420)
chr1 (184-241)||(9322735-9322792)
chr1 (184-241)||(15835288-15835345)
chr1 (161-242)||(51826837-51826918)
chr1 (184-236)||(953727-953779)
chr1 (211-243)||(22183389-22183421)
chr1 (205-241)||(25612170-25612206)
chr1 (184-236)||(28824612-28824664)
chr1 (158-202)||(39881201-39881245)
chr1 (162-242)||(52179692-52179772)
[»] chr4 (45 HSPs)
chr4 (158-243)||(8584005-8584090)
chr4 (156-243)||(44929874-44929961)
chr4 (157-240)||(42218407-42218490)
chr4 (151-243)||(25935778-25935871)
chr4 (151-243)||(8880436-8880528)
chr4 (162-243)||(52109409-52109490)
chr4 (158-243)||(54509713-54509798)
chr4 (156-240)||(7820093-7820177)
chr4 (157-243)||(40143774-40143860)
chr4 (157-240)||(33450140-33450223)
chr4 (157-243)||(3435957-3436038)
chr4 (161-243)||(26336079-26336161)
chr4 (151-234)||(28847111-28847194)
chr4 (158-209)||(35261614-35261665)
chr4 (158-241)||(41761978-41762061)
chr4 (156-243)||(45332663-45332750)
chr4 (160-243)||(47685145-47685228)
chr4 (157-242)||(28100583-28100669)
chr4 (184-241)||(27767970-27768027)
chr4 (170-243)||(42720730-42720803)
chr4 (170-234)||(53594097-53594161)
chr4 (155-203)||(56397439-56397487)
chr4 (185-236)||(12913138-12913189)
chr4 (153-236)||(39479597-39479680)
chr4 (186-241)||(41725041-41725096)
chr4 (211-241)||(9163101-9163131)
chr4 (154-236)||(25331015-25331097)
chr4 (184-241)||(5441318-5441375)
chr4 (184-241)||(30967534-30967591)
chr4 (184-241)||(37915699-37915756)
chr4 (205-238)||(39307407-39307440)
chr4 (157-242)||(44646719-44646804)
chr4 (184-241)||(50018165-50018222)
chr4 (161-242)||(53271911-53271992)
chr4 (184-241)||(54341058-54341115)
chr4 (184-236)||(1044724-1044776)
chr4 (184-236)||(24131212-24131264)
chr4 (184-236)||(28541612-28541664)
chr4 (205-241)||(32322110-32322146)
chr4 (184-236)||(32951076-32951128)
chr4 (184-236)||(34228822-34228874)
chr4 (154-234)||(36479431-36479509)
chr4 (185-241)||(36728047-36728103)
chr4 (185-241)||(37828637-37828693)
chr4 (211-243)||(53275864-53275896)
[»] scaffold0237 (1 HSPs)
scaffold0237 (157-240)||(21416-21499)
[»] chr6 (15 HSPs)
chr6 (157-240)||(29834288-29834371)
chr6 (157-240)||(29865722-29865805)
chr6 (153-243)||(6476713-6476803)
chr6 (157-243)||(30877850-30877936)
chr6 (157-243)||(3110285-3110371)
chr6 (156-242)||(5957123-5957209)
chr6 (158-243)||(10644014-10644099)
chr6 (159-240)||(7858377-7858457)
chr6 (163-236)||(11007689-11007762)
chr6 (157-242)||(31609693-31609778)
chr6 (211-241)||(7497101-7497131)
chr6 (151-236)||(2300977-2301062)
chr6 (184-241)||(14262667-14262724)
chr6 (184-241)||(31895610-31895667)
chr6 (184-241)||(34773323-34773380)
[»] scaffold0153 (1 HSPs)
scaffold0153 (152-243)||(34802-34893)
[»] scaffold0202 (1 HSPs)
scaffold0202 (178-241)||(16546-16609)
[»] scaffold0287 (1 HSPs)
scaffold0287 (159-242)||(11789-11872)
[»] scaffold0922 (1 HSPs)
scaffold0922 (183-241)||(4114-4172)
[»] scaffold0113 (1 HSPs)
scaffold0113 (152-238)||(39091-39177)
[»] scaffold0543 (1 HSPs)
scaffold0543 (184-241)||(10475-10532)
[»] scaffold0042 (1 HSPs)
scaffold0042 (184-241)||(58269-58326)
[»] scaffold0347 (1 HSPs)
scaffold0347 (185-241)||(14811-14867)


Alignment Details
Target: chr2 (Bit Score: 140; Significance: 2e-73; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 17 - 156
Target Start/End: Original strand, 39616782 - 39616921
Alignment:
Q  17 aactttagaattgcagtgaaaatgggatgggagtgagggtgcgctataaaaagacaaaaggcagagagtgtgggaactaactagacaactgtagcaggcg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39616782 aactttagaattgcagtgaaaatgggatgggagtgagggtgcgctataaaaagacaaaaggcagagagtgtgggaactaactagacaactgtagcaggcg 39616881  T
Q  117 tgtcctccaagattcctatttctttttcatgtttgattaa 156  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  39616882 tgtcctccaagattcctatttctttttcatgtttgattaa 39616921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 29940945 - 29941029
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29940945 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 29941029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 45546937 - 45547015
Alignment:
Q  165 attggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45546937 attggattgagatttcaaagaattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 45547015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 6289591 - 6289501
Alignment:
Q  151 gattaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||| ||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||| ||||||||  ||||||||||    
T  6289591 gatttagggggtgtattggattgagatttcaaaggattttaaaaaacttttttgttttataaaagttttgtgatattcaat--agatttttaa 6289501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 11534833 - 11534919
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  11534833 gggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 11534919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 20157844 - 20157757
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||  ||||||| ||||||||||||||||||| |||||||||||| | |||||||  ||||||||||||||| ||||||    
T  20157844 agggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaagaagtctttaggtattcaatcaagacttttaa 20157757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 184 - 243
Target Start/End: Original strand, 24193574 - 24193633
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||    
T  24193574 ggattttaaaagacttttttgttttaaaaaagtcttggggtattcaatcaagatttttaa 24193633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 2288459 - 2288542
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||| ||||||| ||||| ||||||||||||| |||||  | |||||||||||| ||||||||||||||||| |||||    
T  2288459 gggggtgtattgaattgagaattcaagggattttaaaagacttttt--tattataaaagtctagtggtattcaatcaagactttta 2288542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 34029019 - 34028933
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||  | ||| | ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  34029019 gggggtgtattcaactgatatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 34028933  T

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Target: chr2; HSP #10
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 160 - 240
Target Start/End: Original strand, 2372970 - 2373050
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||| |||| || ||| ||||||||||||||| ||||||||| || |||| ||||| |||||||||||||||||||    
T  2372970 ggtgtattgaattgggatttcgaaggattttaaaagacttttttgttatagaaaaatcttgaggtattcaatcaagatttt 2373050  T

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Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 11998504 - 11998417
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||| ||||  ||||||| ||||||||||||||||||| |||||||||||| ||| || ||  ||||||||||||||| ||||||    
T  11998504 agggggtatattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaatgtttttaggtattcaatcaagacttttaa 11998417  T

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Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 45485364 - 45485445
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||| ||| |||||   ||||||||| | |||||| |||||||||| |||||| |||||||||||||||||||||    
T  45485364 gtgtattggattcagatttcaagatattttaaaatacttttttattttataaaaatcttgt-gtattcaatcaagatttttaa 45485445  T

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Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 228
Target Start/End: Original strand, 25343220 - 25343289
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattc 228  Q
    |||||||||  ||||||| || |||||||||||||||| |||||||||||| |||||||||  |||||||    
T  25343220 gggtgtattcaattgagattttaaaggattttaaaagacttttttgttttaaaaaagtctttcggtattc 25343289  T

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Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 27090635 - 27090716
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||||||| || ||| || |||||||||||| ||||| ||| || |||| |||||  ||||||||||||||||||    
T  27090635 gggtgtattggattgggatttccaaagattttaaaagattttttggttatagaaaaatcttgaagtattcaatcaagatttt 27090716  T

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Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 203
Target Start/End: Complemental strand, 21736699 - 21736645
Alignment:
Q  149 ttgattaagggggtgtattggattgagacttcaaaggattttaaaagagtttttt 203  Q
    |||||| ||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  21736699 ttgatttagggggtgtattgaattgagatttcaaaggattttaatagactttttt 21736645  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 15284618 - 15284533
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||| ||||||| ||||| |||||||||||   |||||| |  || |||||||| ||||||||||| ||||| |||||    
T  15284618 gggggtgtattgaattgagaattcaagggattttaaaaagattttttataataaaaaagtctagtggtattcaaccaagactttta 15284533  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 22552057 - 22552000
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||| |  |  |||||||||||||||||||||||||||||||    
T  22552057 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttt 22552000  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 26601497 - 26601444
Alignment:
Q  181 aaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    |||||||||||||||| |||||| || |  ||||||||||||||||||||||||    
T  26601497 aaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaa 26601444  T

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Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 43078591 - 43078648
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||||||||    
T  43078591 ggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaagattttt 43078648  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 16269607 - 16269659
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| || |  ||||||||||||||||||||||||||    
T  16269607 ggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaaga 16269659  T

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Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 12407260 - 12407350
Alignment:
Q  148 tttgattaagggggtgtattggattgagacttcaaag-gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatt 238  Q
    |||| |||||||||||||||||||   || ||| ||| |||||||||||| |||||| |  |  ||||||||||||||||||||||||||||    
T  12407260 tttgtttaagggggtgtattggatcatga-ttctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagatt 12407350  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 18176553 - 18176470
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||| ||| ||| || || ||||||||||||| |||||  |  || |||| ||||||||||||||||||||| |||||    
T  18176553 gggtgtattgaattaagatttgaagggattttaaaagattttttaataataaaaaaatcttgtggtattcaatcaagactttta 18176470  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 37981622 - 37981697
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||||||| |||||||| |||||  ||||||| |||| |||||  || || ||||||| ||||||||||||||||    
T  37981622 gggtgtattagattgagatttcaagagattttagaagattttttgattatagaaaagtcatgtggtattcaatcaa 37981697  T

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Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 19144908 - 19144990
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||||||||||||||||| |  || |  || ||||||||||| | |||||| |  || ||||||||||||||||||||||||    
T  19144908 attaagggggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaa 19144990  T

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Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 378895 - 378952
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  378895 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 378952  T

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Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 1789359 - 1789408
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    |||||||||||| |||||| |  || ||||||||||||||||||||||||    
T  1789359 gattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaa 1789408  T

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Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 158 - 203
Target Start/End: Complemental strand, 14920666 - 14920621
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagtttttt 203  Q
    |||||||||||||||| || || |||||||||||||||| ||||||    
T  14920666 ggggtgtattggattgtgattttaaaggattttaaaagactttttt 14920621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 243
Target Start/End: Complemental strand, 24193559 - 24193486
Alignment:
Q  170 attgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||| |||||| |||||| |||||  ||||||||||| |||||| ||  ||||||||| ||||| ||||||    
T  24193559 attgagatttcaaaagatttttaaagacatttttgttttaaaaaagtttttaggtattcaaacaagacttttaa 24193486  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 26788700 - 26788757
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  26788700 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 26788757  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 28844471 - 28844528
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  28844471 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 28844528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 215518 - 215462
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  215518 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 215462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 6224737 - 6224701
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  6224737 ttttaaaaaagtcttgaggtattcaatcaagattttt 6224701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 14198870 - 14198818
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  14198870 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 14198818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 22551946 - 22551914
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||||||| ||||||    
T  22551946 aaaagtcttgtggtattcaatcaagacttttaa 22551914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 24776271 - 24776323
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  24776271 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 24776323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 32125166 - 32125218
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  32125166 ggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaga 32125218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 8e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 26555809 - 26555898
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26555809 taagggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 26555898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 36055093 - 36055007
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36055093 gggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 36055007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 19552237 - 19552148
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||||| || |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  19552237 taagggggtgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaagatttttaa 19552148  T

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Target: chr3; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 147 - 243
Target Start/End: Complemental strand, 50900544 - 50900447
Alignment:
Q  147 gtttgattaagg-gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||| ||||||| |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50900544 gtttaattaaggtgggtgtattggattaagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 50900447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 35730933 - 35731016
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  35730933 ggtgtattggattgagatttcaaaggattttaaaagatttttttgttttataaaagtcttgtgatattcaatcaagatttttaa 35731016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 24150917 - 24150832
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||| ||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  24150917 ggggtatattggattgagatttcaaaggattttaaaagatttttttgttttataaaaatcttgtggtattcaatcaagatttttaa 24150832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 155 - 243
Target Start/End: Original strand, 30588835 - 30588923
Alignment:
Q  155 aagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||| |||||| | || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  30588835 aagggggtgtattagattgaaattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 30588923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 38629885 - 38629800
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||| ||| ||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  38629885 ggggtgtattggattaagatttcaaataattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 38629800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 38682426 - 38682510
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||| ||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||    
T  38682426 gggtgtattgtattgagatttcaaaggattttaaaagacttttttgttttaaaaaaatcttgtggtattcaatcaagatttttaa 38682510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 52024286 - 52024199
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgtttt-ataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||| |||||||||||| ||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||    
T  52024286 gggggtgcattggattgagatttcaaaggattttaaaagacttttttgttttaaaaaaagtcttgtggtattcaatcaagatttttaa 52024199  T

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Target: chr3; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 157 - 239
Target Start/End: Original strand, 13662546 - 13662628
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattt 239  Q
    |||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||||| ||||||||||||||||||||    
T  13662546 gggggtgtattggattgagatttcaaagaattttaaaagacttttttgttttacaaaagtctcgtggtattcaatcaagattt 13662628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 161 - 243
Target Start/End: Complemental strand, 26293649 - 26293567
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  26293649 gtgtattgaattgaaatttcaaaggattttaaaagacttttttgttttataaaagttttgtggtattcaatcaagatttttaa 26293567  T

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Target: chr3; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 156 - 240
Target Start/End: Complemental strand, 26006070 - 26005986
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||||| || |||||    
T  26006070 agggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtaatattcaataaaaatttt 26005986  T

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Target: chr3; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 53184158 - 53184073
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||| ||||| ||||||| ||||| ||||||||||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  53184158 ggggtctattgaattgagatttcaatggattttaaaagatttttttgttttaaaaaagtctcgtggtattcaatcaagatttttaa 53184073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 27593149 - 27593236
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||| |||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  27593149 agggagtgtattcaattgagatttcaaaggattttaaaagatttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 27593236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 46252290 - 46252203
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||| ||||||||||||||| || ||| |||||||||||| |||||||||||| | |||||| |||||||||||| |||||||||||    
T  46252290 aggggatgtattggattgagattttaaatgattttaaaagatttttttgttttaaacaagtctcgtggtattcaattaagatttttaa 46252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 36785982 - 36786055
Alignment:
Q  170 attgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||| || |||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  36785982 attgagattttaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 36786055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 25713523 - 25713442
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||| |||| || ||| ||||||||||||||||||||| ||| || |||| ||||| ||||||| |||||||||||    
T  25713523 gggtgtattgaattgggatttcgaaggattttaaaagagtttttagttatagaaaaatcttgaggtattccatcaagatttt 25713442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 10105086 - 10105015
Alignment:
Q  171 ttgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||| ||||| ||||||||||||| |||||| || || |||| ||||||||||||||||||||| |||||    
T  10105086 ttgagatttcaagggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagactttta 10105015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 10216233 - 10216162
Alignment:
Q  171 ttgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||| || || ||||||||||||| |||||| || || |||||||||||||||||||||||||| |||||    
T  10216233 ttgagatttaaagggattttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagactttta 10216162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 10225862 - 10225791
Alignment:
Q  171 ttgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||| ||||| ||||||||||||| |||||| || || |||||||||||| ||||||||||||| |||||    
T  10225862 ttgagatttcaagggattttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagactttta 10225791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 221
Target Start/End: Complemental strand, 45927034 - 45926971
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgt 221  Q
    ||||||||||||||||||| || |||||||||||||||| |||||  || || |||||||||||    
T  45927034 ggggtgtattggattgagattttaaaggattttaaaagactttttgattataaaaaagtcttgt 45926971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 10225752 - 10225670
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||| ||||||||| | ||||| | ||||||||| | |||||  || || |||||||||||||||||||||||||| |||||    
T  10225752 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagactttta 10225670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 39338383 - 39338297
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagtttttt-gttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||  ||||||| || ||| |||||||||||| |||||| |||||| |||||||||  |||||||||| |||| ||||||    
T  39338383 ggggtgtattcaattgagattttaaaagattttaaaagattttttttgttttaaaaaagtctttaggtattcaataaagacttttaa 39338297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 4272110 - 4272191
Alignment:
Q  162 tgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||| || ||  ||||||||||||||| ||||| ||  || |||| |||||  |||||||||||||||||||||    
T  4272110 tgtattggattgggatttggaaggattttaaaagattttttggtaatagaaaaatcttgaagtattcaatcaagatttttaa 4272191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 240
Target Start/End: Complemental strand, 6784180 - 6784104
Alignment:
Q  164 tattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||| || |||| |||||||||||||| |||| ||||| ||| || |||| ||||| | |||||||||||||||||    
T  6784180 tattgaatcgagatttcaaaggattttataagactttttagttatacaaaaatcttgagatattcaatcaagatttt 6784104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 10067768 - 10067700
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtatt 227  Q
    |||||||||| ||||||| ||||| ||||||||||||| |||||  || || |||||| ||||||||||    
T  10067768 gggtgtattgaattgagatttcaagggattttaaaagactttttcattataaaaaagttttgtggtatt 10067700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 35337649 - 35337701
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| || |  ||||||||||||||||||||||||||    
T  35337649 ggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaaga 35337701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 242
Target Start/End: Original strand, 46749271 - 46749334
Alignment:
Q  179 tcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||| ||||||||||||| |||||| || || ||||||||||||||| | |||||||| |||||    
T  46749271 tcaatggattttaaaagatttttttattataaaaaagtcttgtggtaatgaatcaagactttta 46749334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 996407 - 996325
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||||||   || |  || ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  996407 taagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 996325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 241
Target Start/End: Complemental strand, 6035377 - 6035287
Alignment:
Q  151 gattaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||||||  |||| ||| || |  ||||||||||||| |||||  || |  |||| |||||||||||||||||||| |||||    
T  6035377 gattaagggggtgtatcagattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagtttttt 6035287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 10104976 - 10104902
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||| ||||||||| | ||||| | ||||||||| | |||||  || || ||||||||||||||||||||||||    
T  10104976 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaa 10104902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 10216123 - 10216049
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||| ||||||||| | ||||| | ||||||||| | |||||  || || ||||||||||||||||||||||||    
T  10216123 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaa 10216049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 23753679 - 23753621
Alignment:
Q  183 aggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  23753679 aggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 23753621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 10660449 - 10660506
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  10660449 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 10660506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 31646576 - 31646519
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  31646576 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 31646519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 36674422 - 36674365
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  36674422 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 36674365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 238
Target Start/End: Original strand, 38772292 - 38772345
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatt 238  Q
    |||||||||||| |||||  || |  ||||||||||||||||||||||||||||    
T  38772292 gattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaagatt 38772345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 52618257 - 52618200
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||| ||||||||||||    
T  52618257 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttt 52618200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 996267 - 996235
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||||||||| ||||    
T  996267 aaaagtcttgtggtattcaatcaagattcttaa 996235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 3206488 - 3206436
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  3206488 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 3206436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 6035240 - 6035204
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  6035240 ttttaaaaaagtcttgaggtattcaatcaagattttt 6035204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 11431441 - 11431497
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  11431441 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 11431497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 12103648 - 12103684
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  12103648 ttttaaaaaagtcttgaggtattcaatcaagattttt 12103684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 12734132 - 12734080
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  12734132 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 12734080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 19253741 - 19253793
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  19253741 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 19253793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 20832910 - 20832966
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||| ||||||||||||||||||||||||    
T  20832910 gattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttt 20832966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 25418391 - 25418423
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||||||| ||||||    
T  25418391 aaaagtcttgtggtattcaatcaagacttttaa 25418423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 27240534 - 27240478
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  27240534 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 27240478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 37820769 - 37820717
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  37820769 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 37820717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 44276408 - 44276444
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  44276408 ttttaaaaaagtcttgaggtattcaatcaagattttt 44276444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 44762329 - 44762277
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  44762329 ggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaga 44762277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 44906804 - 44906748
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  44906804 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 44906748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 52114553 - 52114585
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||||||| ||||||    
T  52114553 aaaagtcttgtggtattcaatcaagacttttaa 52114585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 1606100 - 1606013
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  1606100 agggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 1606013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 42274969 - 42275056
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42274969 agggggtgtattggattgagatttcaaaggattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 42275056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 2112791 - 2112875
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2112791 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 2112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 29260363 - 29260276
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29260363 agggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 29260276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 43605449 - 43605364
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43605449 ggggggtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 43605364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 4655041 - 4655131
Alignment:
Q  153 ttaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||    
T  4655041 ttaagggggtgtattggattgagatttcaaagaattttaaaagatttttttgtttaataaaagtcttgtggtatttaatcaagatttttaa 4655131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 40265367 - 40265281
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  40265367 gggggtgtattggattgaaatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaagatttttaa 40265281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 28619843 - 28619927
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||    
T  28619843 gggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagttttgtggtattcaattaagatttttaa 28619927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 240
Target Start/End: Original strand, 9457541 - 9457624
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9457541 gggggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaagatttt 9457624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 41386956 - 41386870
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagtttttt-gttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  41386956 ggggtgtattggattgagatttcaaaagattttaaaagattttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 41386870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 7148050 - 7148121
Alignment:
Q  163 gtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7148050 gtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaa 7148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 10802862 - 10802771
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||| ||||||| ||||||  ||||||||||| |||||| ||||||||||||||| |||||||||||||||||||||||    
T  10802862 attaagggggtgtattgaattgagatttcaaataattttaaaagacttttttattttataaaagtcttctggtattcaatcaagatttttaa 10802771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 35142041 - 35142126
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||| || || ||||||||||||| ||||| |||||| |||||||||||||||||||||||| ||||||||    
T  35142041 ggggtgtattggattgagattttaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaaaatttttaa 35142126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 30382764 - 30382681
Alignment:
Q  153 ttaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||  ||||||| ||||||||||||||||||| |||||||||||  |||||||||  |||||||||||||||    
T  30382764 ttaagggggtgtattcaattgagatttcaaaggattttaaaagacttttttgtttttaaaaagtctttaggtattcaatcaaga 30382681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 37567452 - 37567363
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||  ||||||| |||||| |||||||||||| |||||||||||| |||||||||  |||||||||| |||| ||||||    
T  37567452 taagggggtgtattcaattgagatttcaaaagattttaaaagatttttttgttttaaaaaagtctttaggtattcaattaagacttttaa 37567363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 9209035 - 9209120
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||| ||||||| ||||||| ||||||||||| |||||||||||| |||||| ||  |||||| |||||||| ||||||    
T  9209035 ggggtgtattgaattgagatttcaaagaattttaaaagacttttttgttttaaaaaagtatttaggtattgaatcaagacttttaa 9209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 40013555 - 40013472
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||| |||| ||||||| ||||||||||| |||||||||||| |||||| |||| |||||||||||| ||||||||    
T  40013555 ggggtgtattggatggagatttcaaagaattttaaaagacttttttgttttaaaaaagt-ttgt-gtattcaatcaaaatttttaa 40013472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 236
Target Start/End: Complemental strand, 4302873 - 4302815
Alignment:
Q  178 ttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||    
T  4302873 ttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaaga 4302815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 185 - 243
Target Start/End: Original strand, 8502657 - 8502715
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||| ||||| |||||| ||||||||||||||||| ||| |||||||||||    
T  8502657 gattttaaaagactttttcgttttaaaaaagtcttgtggtatttaattaagatttttaa 8502715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 42366048 - 42366125
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||||||||||||||| || ||||||| ||||||||||| |||||| |  || |||||| | |||||||||||||||    
T  42366048 gggggtgtattggattgtgatttcaaagcattttaaaagatttttttatgataaaaaagtttggtggtattcaatcaa 42366125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 24214885 - 24214830
Alignment:
Q  181 aaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||| |||||| |  || ||||||||||||||||||||||||||    
T  24214885 aaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaaga 24214830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 14724013 - 14723955
Alignment:
Q  182 aaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||||||| ||||||||| || |||| |||||  ||||||||||||||||||    
T  14724013 aaggattttaaaagacttttttgttatagaaaaatcttgaagtattcaatcaagatttt 14723955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 10295672 - 10295615
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  10295672 ggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttt 10295615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 24296736 - 24296655
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||| |||| || ||| || |||||||||||| ||||| ||| || |||| ||||| |||||||||||| ||||||    
T  24296736 gggtgtattgaattgggatttcgaaagattttaaaagactttttggttatagaaaaatcttgaggtattcaatcatgatttt 24296655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 5576940 - 5576860
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||||  || |  || ||||||||||||| ||||||||  |  || |||||||||||||||||||||||    
T  5576940 agggggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaaga 5576860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 14061573 - 14061629
Alignment:
Q  186 attttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||||||| ||||||    || ||||||||||||||||||||||||||||||||    
T  14061573 attttaaaagacttttttaaagtaaaaaagtcttgtggtattcaatcaagattttta 14061629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 2705113 - 2705058
Alignment:
Q  181 aaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  2705113 aaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaga 2705058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 202
Target Start/End: Original strand, 17790433 - 17790479
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttt 202  Q
    ||||||||||||||||||||| |||||  |||||||||||| |||||    
T  17790433 agggggtgtattggattgagatttcaagagattttaaaagacttttt 17790479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 23115489 - 23115407
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||||||   || |  || ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  23115489 taagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 23115407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 14782426 - 14782369
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  14782426 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 14782369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 238
Target Start/End: Complemental strand, 24502065 - 24502008
Alignment:
Q  181 aaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatt 238  Q
    |||||||||||||||| |||||| |  |  |||||||||||| |||||||||||||||    
T  24502065 aaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagatt 24502008  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 44726101 - 44726044
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  44726101 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 44726044  T

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Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 7466251 - 7466307
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  7466251 gattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttt 7466307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 7507190 - 7507138
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  7507190 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 7507138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 26373720 - 26373772
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  26373720 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 26373772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 39467757 - 39467701
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  39467757 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 39467701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 41479012 - 41479064
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  41479012 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 41479064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 42735568 - 42735516
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  42735568 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 42735516  T

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Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 40410585 - 40410674
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  40410585 taagggggtgtattggattgagatttcaatggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 40410674  T

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Target: chr5; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 243
Target Start/End: Original strand, 17518420 - 17518512
Alignment:
Q  152 attaaggggg-tgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||| |||||| |||||||| ||||| ||||||||||||| ||||| |||||| |||||||||||||||||||||||||||||||||    
T  17518420 attaagggggatgtattagattgagatttcaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaagatttttaa 17518512  T

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Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 10571113 - 10571195
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||| ||||| ||||||||||| | ||||| ||||||||||||||||||| ||||||||||| ||||||||    
T  10571113 gtgtattggattgagatttcaatggattttaaaaaactttttcgttttataaaagtcttgtgatattcaatcaaaatttttaa 10571195  T

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Target: chr5; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 6828878 - 6828799
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||||    
T  6828878 gggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttgggtattcaatcaaga 6828799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 28594534 - 28594443
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttt-tataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||||||| ||||| || || ||  |||||||||||| ||||||  || || ||||||||||||||||||||||||||||||||    
T  28594534 attaagggggtgtatttgattgggattttaagagattttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagattttta 28594443  T

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Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 229
Target Start/End: Original strand, 27786210 - 27786280
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattca 229  Q
    |||||||||||||| ||| ||||| ||||||||||||| |||||| || || |||||||||||||||||||    
T  27786210 gggtgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 7857025 - 7857106
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||| |||||||| ||  ||||||||||||||| ||||| ||| || |||| ||||| |||||||||||||||||||    
T  7857025 gggtgtattagattgagatttagaaggattttaaaagactttttggttatagaaaaatcttgaggtattcaatcaagatttt 7857106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 26795705 - 26795634
Alignment:
Q  171 ttgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||| ||||| ||||||||||||| |||||| || || |||| ||||||||||||||||||||| |||||    
T  26795705 ttgagatttcaagggattttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagactttta 26795634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 242
Target Start/End: Complemental strand, 9689421 - 9689337
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||| |||| ||| |||||  |||||||||||| |||||  || || |||| ||||| |||||||||||||||||||||    
T  9689421 ggggtgtatttgatttagatttcaagagattttaaaagattttttaattataaaaaaatcttgaggtattcaatcaagattttta 9689337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 242
Target Start/End: Complemental strand, 26806769 - 26806698
Alignment:
Q  171 ttgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||| ||||| ||||||||||||| |||||| || || |||| ||||||| ||||||||||||| |||||    
T  26806769 ttgagatttcaagggattttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagactttta 26806698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 160 - 242
Target Start/End: Complemental strand, 26806659 - 26806577
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||| ||||||||| | ||||| | ||||||||| | |||||  || || |||||||||||||||||||||||||| |||||    
T  26806659 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagactttta 26806577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 39753432 - 39753518
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||||||||| || ||||| |||||||| |||| ||||||    || |||||| | ||||||||||||||||| |||||    
T  39753432 agggggtgtattggattgtgatttcaacggattttagaagactttttttaaataaaaaagtttggtggtattcaatcaagactttta 39753518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 183 - 241
Target Start/End: Complemental strand, 7948609 - 7948551
Alignment:
Q  183 aggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||||| |||||| || |  |||||||| ||||||||||||||||| ||||    
T  7948609 aggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagactttt 7948551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 234
Target Start/End: Complemental strand, 26795595 - 26795521
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||| ||||||||| | ||||| | ||||||||| | |||||  || || ||||||||||||||||||||||||    
T  26795595 ggtgttttggattgaaatttcaaggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaa 26795521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 4550548 - 4550491
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  4550548 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 4550491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 14000396 - 14000339
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  14000396 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 14000339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 33656359 - 33656282
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||   || || || ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  33656359 gggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaga 33656282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 2276286 - 2276206
Alignment:
Q  162 tgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||| ||||||| ||||| ||||||||||||  |||||| |  || |||| | | ||||||||||||||||| |||||    
T  2276286 tgtattgaattgagaattcaagggattttaaaagtcttttttataataaaaaaatttagtggtattcaatcaagactttta 2276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 6460707 - 6460759
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  6460707 ggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaaga 6460759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 7016988 - 7016936
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  7016988 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 7016936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 13925951 - 13925987
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  13925951 ttttaaaaaagtcttgaggtattcaatcaagattttt 13925987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 37013830 - 37013886
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  37013830 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 37013886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 81868 - 81782
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  81868 gggggtgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 81782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 151856 - 151942
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  151856 gggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgatattcaatcaagatttttaa 151942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 27418728 - 27418642
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27418728 gggggtgtactggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 27418642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 47915143 - 47915060
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  47915143 gggggtgtattggattgagatttcataggattttaaaagacttttttgttttataaaagtcttgtggtattcaattaagatttt 47915060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 163 - 243
Target Start/End: Original strand, 30110807 - 30110887
Alignment:
Q  163 gtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||| ||||||| ||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||    
T  30110807 gtattggattgagatttcaaagaattttaaaagacttttttgttttataaaagtcttgtagtattcaattaagatttttaa 30110887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 40097092 - 40097178
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  40097092 gggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 40097178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 243
Target Start/End: Complemental strand, 43057758 - 43057681
Alignment:
Q  166 ttggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||||    
T  43057758 ttggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgttattctattaatatttttaa 43057681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 185 - 243
Target Start/End: Complemental strand, 35090164 - 35090106
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  35090164 gattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaaaatttttaa 35090106  T

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Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 31494239 - 31494320
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||||||| || ||  ||||||||||||||| ||||| ||| || |||| ||||| |||||||||||||||||||    
T  31494239 gggtgtattggattgggatttggaaggattttaaaagactttttggttatagaaaaatcttgaggtattcaatcaagatttt 31494320  T

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Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 242
Target Start/End: Original strand, 3634213 - 3634296
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||||||||||  || ||| | ||||||||||||| |||||| || || |||||||||||| ||||||||||||| |||||    
T  3634213 gggtgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagactttta 3634296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 152 - 195
Target Start/End: Complemental strand, 43057879 - 43057836
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaag 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  43057879 attaagggggtgtattggattgagatttcaaaggattttaaaag 43057836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 160 - 243
Target Start/End: Complemental strand, 39301329 - 39301245
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagtttttt-gttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||  ||||||| |||||| |||||||||||| |||||| |||||| |||||||||  |||||| |||||||| ||||||    
T  39301329 ggtgtattcaattgagatttcaaaagattttaaaagactttttttgttttaaaaaagtctttaggtatttaatcaagacttttaa 39301245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 7993021 - 7993108
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||| ||||||||||| ||| |  | |||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  7993021 taaggggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 7993108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 12253481 - 12253431
Alignment:
Q  153 ttaagggggtgtattggattgagacttcaaaggattttaaaagagtttttt 203  Q
    |||||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  12253481 ttaagggggtgtattgaattgagatttcaaaggattttaatagactttttt 12253431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 24939733 - 24939652
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||| |||| || ||| || |||||||||||| ||||| ||| || |||| ||||| |||||||||||| ||||||    
T  24939733 gggtgtattgcattgggagttcgaaagattttaaaagactttttggttatagaaaaatcttgaggtattcaatcatgatttt 24939652  T

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Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 28342256 - 28342313
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||||||||    
T  28342256 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttt 28342313  T

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Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 8078311 - 8078363
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  || ||||||||||||||||||||||||||    
T  8078311 ggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaaga 8078363  T

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Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 34695147 - 34695199
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| || |  ||||||||||||||||||||||||||    
T  34695147 ggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaaga 34695199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 203
Target Start/End: Original strand, 33474515 - 33474562
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagtttttt 203  Q
    ||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  33474515 agggggtgtattgaattgagatttcaaaggattttaatagattttttt 33474562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Complemental strand, 44343717 - 44343635
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||||||   || |  || ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  44343717 taagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 44343635  T

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Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 242
Target Start/End: Complemental strand, 46037441 - 46037351
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||||||||||||| ||||||| || |  ||||||||||||| |||||| |  |  |||||| | ||| ||||||||||||| |||||    
T  46037441 attaagggggtgtattgaattgagaattaatgggattttaaaagacttttttataattaaaaagtttagtgatattcaatcaagactttta 46037351  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 23101207 - 23101264
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  23101207 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttt 23101264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 37327836 - 37327893
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  37327836 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 37327893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 41827223 - 41827280
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  41827223 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttt 41827280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 47031245 - 47031326
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||| |||| || ||  ||||||||||||| | ||||| ||| || |||| ||||| | |||||||||||||||||    
T  47031245 gggtgtattgaattgggattttgaaggattttaaaaaactttttggttatagaaaaatcttgagatattcaatcaagatttt 47031326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 48117884 - 48117827
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  48117884 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 48117827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 509607 - 509659
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||  || |  ||||||||||||||||||||||||||    
T  509607 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 509659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 3022940 - 3022976
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  3022940 ttttaaaaaagtcttgaggtattcaatcaagattttt 3022976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 18915026 - 18914974
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  18915026 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 18914974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 21067792 - 21067848
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  21067792 gattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttt 21067848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 29615054 - 29614998
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  29615054 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 29614998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 39027975 - 39028063
Alignment:
Q  153 ttaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||| ||| |||||||||||  || || | || ||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  39027975 ttaaagggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 39028063  T

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Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 45318458 - 45318544
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  45318458 gggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttctggtattcaatcaagatttttaa 45318544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 26882911 - 26882826
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  26882911 ggggtgtattggattgagatttcaaaggattttaaaagacttttttgttttataaaagtcttgtgttattcaatcaagatttttaa 26882826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 159 - 243
Target Start/End: Original strand, 52705393 - 52705477
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||  ||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  52705393 gggtgtattcaattgagatttcaaaagattttaaaagatttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 52705477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 36402245 - 36402331
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  36402245 gggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 36402331  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 1928489 - 1928404
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||  ||||||| || |||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  1928489 ggggtgtattcaattgagattttaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 1928404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 10896799 - 10896884
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||  ||||||| ||||||||||||||||||| |||||| ||||| |||||||||  ||||||||||||||| ||||||    
T  10896799 ggggtgtattcaattgagatttcaaaggattttaaaagatttttttattttaaaaaagtctttaggtattcaatcaagacttttaa 10896884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 9831299 - 9831374
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    |||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  |||||||||||||    
T  9831299 gggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaa 9831374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 27198271 - 27198346
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||||||||||||||||||| || ||||||||||||| |||||  || || ||||||||||||||||||||||||    
T  27198271 gggtgtattggattgagactttaagggattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaa 27198346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 42657712 - 42657791
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||||||| |||||  |||||||||||| |||||  || || ||||||||||||||||||||||||||    
T  42657712 gggggtgtattggattgagatttcaagagattttaaaagactttttaattataaaaaagtcttgtggtattcaatcaaga 42657791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 29208757 - 29208839
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||  ||||||| ||||||||||||||||||| |||||||||||| ||| |||||  ||||||||||||||| ||||||    
T  29208757 gtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaatgtctttaggtattcaatcaagacttttaa 29208839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 19007668 - 19007580
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||| |||||||||| ||||||| ||||| ||||||||||||| |||||| |  |  |||||||| ||||||||||||||||| |||||    
T  19007668 taagtgggtgtattgaattgagatttcaagggattttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagactttta 19007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 33243397 - 33243310
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||| ||||||  ||||| | |||||| |||||||||||| |||||||||||| |||||| ||  ||||||||||||||| ||||||    
T  33243397 aggggatgtattcaattgaaatttcaaaagattttaaaagacttttttgttttaaaaaagtttttaggtattcaatcaagacttttaa 33243310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 33263570 - 33263483
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||| ||||||  ||||| | |||||| |||||||||||| |||||||||||| |||||| ||  ||||||||||||||| ||||||    
T  33263570 aggggatgtattcaattgaaatttcaaaagattttaaaagacttttttgttttaaaaaagtttttaggtattcaatcaagacttttaa 33263483  T

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Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 14555400 - 14555312
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||| ||||||||||||||  | || |||||||||||||||| |||||| |  || |||||| | ||||||||||||||||| |||||    
T  14555400 taaggaggtgtattggattgtaatttaaaaggattttaaaagacttttttataataaaaaagtttggtggtattcaatcaagactttta 14555312  T

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Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 240
Target Start/End: Original strand, 9191131 - 9191212
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||||||||||| ||  ||  ||||||||||| ||||| ||| || |||| ||||| | |||||||||||||||||    
T  9191131 gggtgtattggattgagatttggaaaaattttaaaagactttttggttatagaaaaatcttgagttattcaatcaagatttt 9191212  T

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Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 34772311 - 34772388
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||| || ||||||||||||||||||| ||||||    || |||||| | ||||||||| |||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagacttttttaaaataaaaaagtttggtggtattcgatcaaga 34772388  T

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Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 236
Target Start/End: Complemental strand, 6304574 - 6304494
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||||   || |  |||||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  6304574 agggggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaaga 6304494  T

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Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 19452142 - 19452090
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| | ||  ||||||||||||||||||||||||||    
T  19452142 ggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaaga 19452090  T

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Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 38536339 - 38536287
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||  || || ||||||||||||||||||||||||||    
T  38536339 ggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaaga 38536287  T

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Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 38558557 - 38558505
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||  || || ||||||||||||||||||||||||||    
T  38558557 ggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaaga 38558505  T

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Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 186 - 238
Target Start/End: Complemental strand, 50192841 - 50192789
Alignment:
Q  186 attttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatt 238  Q
    ||||||||||| |||||| || |  ||||||||||||||||||||||||||||    
T  50192841 attttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagatt 50192789  T

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Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 14229139 - 14229052
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttt-tataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||| ||||| || ||||| ||||||||||||| ||||||  |  || |||||| | ||||||||||||||||| |||||    
T  14229139 agggggtgtatttgattgtgatttcaagggattttaaaagactttttttatagtaaaaaagtttagtggtattcaatcaagactttta 14229052  T

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Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 236
Target Start/End: Original strand, 22183275 - 22183330
Alignment:
Q  181 aaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  22183275 aaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 22183330  T

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Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 6312482 - 6312539
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  6312482 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 6312539  T

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Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 8141420 - 8141363
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  8141420 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 8141363  T

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Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 9322792 - 9322735
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  9322792 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 9322735  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 15835345 - 15835288
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  15835345 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 15835288  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 242
Target Start/End: Complemental strand, 51826918 - 51826837
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||| ||| ||| || || ||||||||||||| |||||  |  || |||| ||||||||||||||||||||| |||||    
T  51826918 gtgtattgaattaagatttgaagggattttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagactttta 51826837  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 953727 - 953779
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  953727 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 953779  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 22183389 - 22183421
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||||||||| ||||    
T  22183389 aaaagtcttgtggtattcaatcaagattcttaa 22183421  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 25612170 - 25612206
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  25612170 ttttaaaaaagtcttgaggtattcaatcaagattttt 25612206  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 28824664 - 28824612
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  28824664 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 28824612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 202
Target Start/End: Complemental strand, 39881245 - 39881201
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttt 202  Q
    ||||||||||| ||| |||||||||| |||||||||||| |||||    
T  39881245 ggggtgtattgaattaagacttcaaatgattttaaaagacttttt 39881201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 162 - 242
Target Start/End: Complemental strand, 52179772 - 52179692
Alignment:
Q  162 tgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||| |||| ||||||||||||||||| || |||||    || |||||||| | |||||||||| |||| |||||    
T  52179772 tgtattggatcgagatttcaaaggattttaaaatagctttttagaataaaaaagtctagaggtattcaataaagactttta 52179692  T

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Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 8584090 - 8584005
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  8584090 ggggtgtattggattgagatttcaaaggattttaaaagacttttttattttataaaagtcttgtggtattcaatcaagatttttaa 8584005  T

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Target: chr4; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 44929874 - 44929961
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||| || ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  44929874 agggggtgtattggattgagattttaaaagattttaaaatacttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 44929961  T

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Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 42218490 - 42218407
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||||||||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||| | ||||||    
T  42218490 gggggtgtattggattgagatttcaaaggattttaaaaaacttttttgttttataaaagtcttgtggtattcaattaggatttt 42218407  T

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Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 25935778 - 25935871
Alignment:
Q  151 gattaagggggtgtattggattgagacttcaaaggattttaaaaga-gttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||  |||||| |||||||||||| || |||||||||||||||||||||||    
T  25935778 gatttagggggtgtattggattgagatttcaaaggattttaaaagactttttttattttataaaagttttatggtattcaatcaagatttttaa 25935871  T

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Target: chr4; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 8880436 - 8880528
Alignment:
Q  151 gattaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtatt-caatcaagatttttaa 243  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| |||| |||||||||||    
T  8880436 gattaggggggtgtattggatt-agatttcaaaggattttaaaagacttttttgttttataaaaatcttgtggtattccaattaagatttttaa 8880528  T

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Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 52109409 - 52109490
Alignment:
Q  162 tgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||| |||| ||| || |||| ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  52109409 tgtattagatttagattttaaagtattttaaaagacttttttgttttataaaaatcttgtggtattcaatcaagatttttaa 52109490  T

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Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 158 - 243
Target Start/End: Original strand, 54509713 - 54509798
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  54509713 ggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 54509798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 240
Target Start/End: Original strand, 7820093 - 7820177
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||| ||||||||||||| |||||| |||||||||||| || |||||||||||||||| ||||||||||| ||||| |||||    
T  7820093 agggggtatattggattgagatttcaaatgattttaaaagacttatttgttttataaaagttttgtggtattccatcaaaatttt 7820177  T

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Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 40143774 - 40143860
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||  ||||||| |||||| |||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  40143774 gggggtgtattcaattgagatttcaaaagattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 40143860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 33450223 - 33450140
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||||||||||||| ||||| ||||||||||||| ||||| |||||| ||||||| ||| ||||||||| | ||||||    
T  33450223 gggggtgtattggattgagatttcaatggattttaaaagactttttcgttttaaaaaagtcgtgtagtattcaattaggatttt 33450140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 3436038 - 3435957
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||| ||||||||||||| || |||||||||||||||| |||||||||||||||||     ||||||||||||||||| ||||||    
T  3436038 gggggtttattggattgagattttaaaggattttaaaagacttttttgttttataaaa-----gtggtattcaatcaagaattttaa 3435957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 243
Target Start/End: Original strand, 26336079 - 26336161
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||  ||||||| ||||||||||||||||||| |||||||||||| ||| |||||  ||||||||||||||| ||||||    
T  26336079 gtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaatgtctttaggtattcaatcaagacttttaa 26336161  T

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Target: chr4; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 234
Target Start/End: Complemental strand, 28847194 - 28847111
Alignment:
Q  151 gattaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    |||| ||||| ||||||||||||||| || |||||||||||||||| |||||| |  || |||||||| |||||||||||||||    
T  28847194 gatttaggggatgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaa 28847111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 209
Target Start/End: Original strand, 35261614 - 35261665
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgtttta 209  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  35261614 ggggtgtattggattgagatttcaaaggattttaaaagacttttttgtttta 35261665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 241
Target Start/End: Original strand, 41761978 - 41762061
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||||||||| || |||||||||||||||| ||| |  || || ||||||||||||||||| |||||||| ||||    
T  41761978 ggggtgtattggattgagattttaaaggattttaaaagactttgtgattataaaaaagtcttgtggtattgaatcaagactttt 41762061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 45332663 - 45332750
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||  ||||||| ||||||| ||||||||||| |||||||||||| ||| |||||  ||||||||||||| | ||||||    
T  45332663 agggggtgtattcaattgagatttcaaagaattttaaaagacttttttgttttaaaaatgtctttaggtattcaatcaaaacttttaa 45332750  T

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Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 243
Target Start/End: Original strand, 47685145 - 47685228
Alignment:
Q  160 ggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||  ||||||| |||||| |||||||||||| |||||||||||| |||| ||||  ||||||||||||||| ||||||    
T  47685145 ggtgtattcaattgagatttcaaaagattttaaaagacttttttgttttaaaaaaatctttaggtattcaatcaagacttttaa 47685228  T

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Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 28100669 - 28100583
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttt-tataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||||||||||||| || ||||| || |||||||||| ||||||  || || |||||||||||||||||||||||||| |||||    
T  28100669 gggggtgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagactttta 28100583  T

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Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 27767970 - 27768027
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||||||||    
T  27767970 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttt 27768027  T

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Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 243
Target Start/End: Original strand, 42720730 - 42720803
Alignment:
Q  170 attgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||| || |||||||||||||||| |||||||||||| ||| |||||  |||||| |||||| | ||||||    
T  42720730 attgagattttaaaggattttaaaagacttttttgttttaaaaatgtctttaggtatttaatcaaaacttttaa 42720803  T

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Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 170 - 234
Target Start/End: Original strand, 53594097 - 53594161
Alignment:
Q  170 attgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||||| ||||| | ||||||||||| |||||| || || ||||||||||||| ||||||||||    
T  53594097 attgagatttcaatgaattttaaaagacttttttattatagaaaagtcttgtggcattcaatcaa 53594161  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 203
Target Start/End: Original strand, 56397439 - 56397487
Alignment:
Q  155 aagggggtgtattggattgagacttcaaaggattttaaaagagtttttt 203  Q
    |||||||||||||| ||||||| ||||||||||||||| ||| ||||||    
T  56397439 aagggggtgtattgaattgagatttcaaaggattttaatagactttttt 56397487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 12913138 - 12913189
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||| |||||  ||||  ||||||||||||||||||||||||||    
T  12913138 gattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaaga 12913189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 236
Target Start/End: Complemental strand, 39479680 - 39479597
Alignment:
Q  153 ttaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||||||||   || || ||   ||||||||||| |||||| |  || ||||||||||||||||||||||||||    
T  39479680 ttaagggggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaaga 39479597  T

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Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 186 - 241
Target Start/End: Original strand, 41725041 - 41725096
Alignment:
Q  186 attttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||| |||||  || || |||||||||||| ||||||||||||||||||    
T  41725041 attttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttt 41725096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 241
Target Start/End: Original strand, 9163101 - 9163131
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||||||||||||||||||||||    
T  9163101 aaaagtcttgtggtattcaatcaagattttt 9163131  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 25331015 - 25331097
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||||||||   || |  ||| |||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  25331015 taagggggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 25331097  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 5441318 - 5441375
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  5441318 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 5441375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 30967591 - 30967534
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  30967591 ggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttt 30967534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 37915699 - 37915756
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  37915699 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 37915756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 39307440 - 39307407
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagatt 238  Q
    ||||| ||||||||||||||||||||||||||||    
T  39307440 ttttaaaaaagtcttgtggtattcaatcaagatt 39307407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 44646719 - 44646804
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||| ||  ||| |||||  |||||||||||| |||||  |  || |||| ||||||||||||||||||||| |||||    
T  44646719 gggggtgtattgaatcaagatttcaagagattttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagactttta 44646804  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 50018165 - 50018222
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||| | |||||  || || |||||||||||||||||||||||||| ||||    
T  50018165 ggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttt 50018222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 242
Target Start/End: Original strand, 53271911 - 53271992
Alignment:
Q  161 gtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||| |||| || ||||  ||||||||||||| ||||||    || |||||||||||| ||||||||||||| |||||    
T  53271911 gtgtattgaattgggatttcatgggattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagactttta 53271992  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 54341058 - 54341115
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  54341058 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 54341115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 1044724 - 1044776
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  1044724 ggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaga 1044776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 24131264 - 24131212
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  24131264 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 24131212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Original strand, 28541612 - 28541664
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||  ||||| || |  ||||||||||||||||||||||||||    
T  28541612 ggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaaga 28541664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 32322110 - 32322146
Alignment:
Q  205 ttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||| |||||||||| ||||||||||||||||||||    
T  32322110 ttttaaaaaagtcttgaggtattcaatcaagattttt 32322146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 32951128 - 32951076
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  32951128 ggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaga 32951076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 236
Target Start/End: Complemental strand, 34228874 - 34228822
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  34228874 ggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 34228822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 234
Target Start/End: Complemental strand, 36479509 - 36479431
Alignment:
Q  154 taagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaa 234  Q
    ||||||| ||||||||||| ||| ||| ||| ||||||||||| |||||  || |  ||||||||||||||||||||||||    
T  36479509 taaggggatgtattggatt-agaattctaagaattttaaaaga-tttttaattatgaaaaagtcttgtggtattcaatcaa 36479431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 36728103 - 36728047
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  ||||||||||| |||||||||||||||||||    
T  36728103 gattttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaagattttt 36728047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 37828693 - 37828637
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  37828693 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 37828637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 53275864 - 53275896
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||| |||||||||||||||||||||    
T  53275864 aaaagtcttgtagtattcaatcaagatttttaa 53275896  T

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Target: scaffold0237 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 21499 - 21416
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  21499 gggggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaagatttt 21416  T

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Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 29834371 - 29834288
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29834371 gggggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaagatttt 29834288  T

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Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 29865805 - 29865722
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    ||||||||||| |||||||| |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  29865805 gggggtgtattcgattgagatttcaaaggattttaaaagacatttttgttttataaaagtcttgtggtattcaatcaagatttt 29865722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 153 - 243
Target Start/End: Complemental strand, 6476803 - 6476713
Alignment:
Q  153 ttaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| | |||||||||||||||||||||  ||||||||| |||||||||||    
T  6476803 ttaagggggtgtattggattgaaatttcaatggattttaaaagactgttttgttttataaaagtcttgcagtattcaattaagatttttaa 6476713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 30877850 - 30877936
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||  ||||||| ||||||||||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  30877850 gggggtgtattcaattgagatttcaaaggattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 30877936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 157 - 243
Target Start/End: Complemental strand, 3110371 - 3110285
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    |||||||||||||||| ||| ||||||  ||||||||||| ||||||||||||||||| |||| |||||||||||||  ||||||||    
T  3110371 gggggtgtattggattcagatttcaaaatattttaaaagacttttttgttttataaaaatcttatggtattcaatcataatttttaa 3110285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 5957123 - 5957209
Alignment:
Q  156 agggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||||||||| ||||||| ||||| ||||||||||||| |||||| |  || |||||||| ||||||||||||||||| |||||    
T  5957123 agggggtgtattgaattgagaattcaagggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaagactttta 5957209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 158 - 243
Target Start/End: Complemental strand, 10644099 - 10644014
Alignment:
Q  158 ggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||  ||||||| ||||||  ||||||||||| |||||||||||| |||||||||  ||||||||||||||| ||||||    
T  10644099 ggggtgtattcaattgagatttcaaaatattttaaaagacttttttgttttaaaaaagtctttaggtattcaatcaagacttttaa 10644014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 7858457 - 7858377
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatttt 240  Q
    |||||||||| ||||||| |||| | |||||||||| | |||||||||||| |||||| ||||||| |||||||||||||||    
T  7858457 gggtgtattgaattgagatttcatatgattttaaaatatttttttgttttaaaaaagt-ttgtggtgttcaatcaagatttt 7858377  T

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Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 236
Target Start/End: Complemental strand, 11007762 - 11007689
Alignment:
Q  163 gtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||||||||||||| |||||| |||||||||||| |||||   | || ||||||||||||||||| ||| ||||    
T  11007762 gtattggattgagatttcaaaagattttaaaagactttttaaatataaaaaagtcttgtggtatttaattaaga 11007689  T

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Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 31609778 - 31609693
Alignment:
Q  157 gggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    |||||||||||| ||  ||  ||||| ||||||||||||| |||||  || || |||| ||||||||||||||||||||| |||||    
T  31609778 gggggtgtattgaatgaagttttcaatggattttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagactttta 31609693  T

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Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 211 - 241
Target Start/End: Original strand, 7497101 - 7497131
Alignment:
Q  211 aaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||||||||||||||||||||||    
T  7497101 aaaagtcttgtggtattcaatcaagattttt 7497131  T

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Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 2301062 - 2300977
Alignment:
Q  151 gattaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaaga 236  Q
    |||| ||||||||||||||||   || |  || ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||    
T  2301062 gatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 2300977  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 14262724 - 14262667
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||| ||||||||||||||||||||||||||    
T  14262724 ggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttt 14262667  T

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Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 31895610 - 31895667
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  31895610 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 31895667  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 34773323 - 34773380
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  34773323 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 34773380  T

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Target: scaffold0153 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 152 - 243
Target Start/End: Complemental strand, 34893 - 34802
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaaga-gttttttgttttataaaagtcttgtggtattcaatcaagatttttaa 243  Q
    ||||||||||||||||||||||||| || |||||||||||||| |  |||||||||||||||||||||||| |||||||||||||||||||||    
T  34893 attaagggggtgtattggattgagattttaaaggattttaaaatactttttttgttttataaaagtcttgt-gtattcaatcaagatttttaa 34802  T

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Target: scaffold0202 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 16609 - 16546
Alignment:
Q  178 ttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||| |||||| ||||| |||||||||||| ||||||||||||||||| |||||||||||||    
T  16609 ttcaaatgattttgaaagacttttttgttttaaaaaagtcttgtggtatttaatcaagattttt 16546  T

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Target: scaffold0287 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 159 - 242
Target Start/End: Complemental strand, 11872 - 11789
Alignment:
Q  159 gggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttta 242  Q
    ||||||||||||||  || ||| | ||||||||||||| |||||| || || |||||||||||| ||||||||||||| |||||    
T  11872 gggtgtattggattcggatttctagggattttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagactttta 11789  T

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Target: scaffold0922 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 241
Target Start/End: Original strand, 4114 - 4172
Alignment:
Q  183 aggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||||| |||||  ||||  |||||||||||||||||||||||||| ||||    
T  4114 aggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttt 4172  T

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Target: scaffold0113 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 39177 - 39091
Alignment:
Q  152 attaagggggtgtattggattgagacttcaaaggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagatt 238  Q
    ||||||||||||||||||||   || |  || ||||||||||||| |||||| |  |  ||||||||||||||||||||||||||||    
T  39177 attaagggggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagatt 39091  T

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Target: scaffold0543 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Original strand, 10475 - 10532
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  10475 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 10532  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 184 - 241
Target Start/End: Complemental strand, 58326 - 58269
Alignment:
Q  184 ggattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    ||||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  58326 ggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 58269  T

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Target: scaffold0347 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 14811 - 14867
Alignment:
Q  185 gattttaaaagagttttttgttttataaaagtcttgtggtattcaatcaagattttt 241  Q
    |||||||||||| |||||  || |  |||||||||||||||||||||||||| ||||    
T  14811 gattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttt 14867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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