View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3597_low_18 (Length: 242)

Name: NF3597_low_18
Description: NF3597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3597_low_18
NF3597_low_18
[»] chr8 (38 HSPs)
chr8 (9-149)||(9288451-9288591)
chr8 (9-152)||(14782126-14782269)
chr8 (9-152)||(44725801-44725944)
chr8 (9-149)||(10295374-10295515)
chr8 (9-149)||(18958721-18958861)
chr8 (9-149)||(19717875-19718015)
chr8 (9-149)||(43166684-43166824)
chr8 (9-149)||(39467462-39467602)
chr8 (9-149)||(26856139-26856279)
chr8 (14-149)||(4403184-4403319)
chr8 (9-149)||(24501807-24501947)
chr8 (9-149)||(26374424-26374564)
chr8 (9-149)||(42937423-42937563)
chr8 (9-149)||(42938111-42938251)
chr8 (9-146)||(18305968-18306095)
chr8 (9-149)||(7466407-7466537)
chr8 (9-149)||(32497597-32497727)
chr8 (9-149)||(16362268-16362398)
chr8 (9-149)||(2704813-2704953)
chr8 (9-149)||(7506893-7507033)
chr8 (9-149)||(42735271-42735411)
chr8 (14-149)||(5576614-5576749)
chr8 (9-134)||(10392246-10392371)
chr8 (9-149)||(37857191-37857321)
chr8 (10-149)||(42305789-42305918)
chr8 (9-149)||(23115163-23115302)
chr8 (17-149)||(39189810-39189940)
chr8 (9-149)||(31623767-31623887)
chr8 (9-149)||(4950010-4950150)
chr8 (9-67)||(4031334-4031392)
chr8 (14-149)||(43959734-43959859)
chr8 (15-123)||(8410416-8410526)
chr8 (9-124)||(13478269-13478384)
chr8 (15-149)||(41479175-41479299)
chr8 (81-127)||(4031294-4031340)
chr8 (9-67)||(32711358-32711416)
chr8 (18-66)||(9770497-9770545)
chr8 (10-66)||(41070018-41070074)
[»] chr7 (60 HSPs)
chr7 (9-152)||(23101364-23101507)
chr7 (9-152)||(28342413-28342556)
chr7 (9-152)||(39784165-39784308)
chr7 (9-149)||(3022992-3023132)
chr7 (9-152)||(29614755-29614898)
chr7 (9-149)||(18838455-18838595)
chr7 (9-149)||(28034799-28034939)
chr7 (9-149)||(7993208-7993348)
chr7 (9-149)||(8675399-8675539)
chr7 (9-149)||(9882231-9882370)
chr7 (15-149)||(33382709-33382843)
chr7 (9-149)||(47914339-47914479)
chr7 (14-149)||(44256760-44256895)
chr7 (15-149)||(12893487-12893621)
chr7 (9-152)||(509722-509855)
chr7 (9-149)||(7718356-7718496)
chr7 (29-149)||(37972861-37972981)
chr7 (9-149)||(40996643-40996783)
chr7 (9-137)||(43581096-43581224)
chr7 (10-149)||(44121904-44122033)
chr7 (14-149)||(973262-973397)
chr7 (14-149)||(7719254-7719389)
chr7 (9-148)||(12740439-12740577)
chr7 (14-149)||(34695351-34695486)
chr7 (15-149)||(43187351-43187485)
chr7 (9-149)||(40460711-40460841)
chr7 (9-149)||(18914729-18914869)
chr7 (9-149)||(30440869-30441009)
chr7 (29-149)||(41827390-41827510)
chr7 (14-149)||(32142911-32143046)
chr7 (14-149)||(44343390-44343525)
chr7 (9-149)||(10068533-10068673)
chr7 (9-137)||(20275269-20275397)
chr7 (9-149)||(47879241-47879381)
chr7 (9-149)||(29585580-29585710)
chr7 (9-149)||(37327993-37328123)
chr7 (9-149)||(46405435-46405565)
chr7 (9-109)||(32883848-32883948)
chr7 (14-149)||(34009091-34009226)
chr7 (15-149)||(39219371-39219504)
chr7 (14-114)||(43679492-43679592)
chr7 (14-149)||(7113530-7113665)
chr7 (9-134)||(33892269-33892384)
chr7 (9-149)||(12963767-12963902)
chr7 (9-149)||(39028163-39028293)
chr7 (12-113)||(25805761-25805862)
chr7 (9-76)||(19251605-19251672)
chr7 (9-67)||(47066770-47066828)
chr7 (18-150)||(19810874-19810996)
chr7 (17-103)||(10676460-10676546)
chr7 (14-149)||(17001037-17001152)
chr7 (9-149)||(9179946-9180076)
chr7 (9-76)||(31638948-31639015)
chr7 (9-149)||(3797061-3797191)
chr7 (81-140)||(47066822-47066881)
chr7 (12-70)||(447852-447910)
chr7 (17-124)||(727594-727691)
chr7 (12-116)||(1470261-1470364)
chr7 (49-92)||(10617024-10617067)
chr7 (9-76)||(44623343-44623410)
[»] chr4 (62 HSPs)
chr4 (9-152)||(5441475-5441618)
chr4 (9-152)||(27768127-27768270)
chr4 (9-152)||(54341215-54341358)
chr4 (9-152)||(37828394-37828537)
chr4 (9-152)||(48261198-48261341)
chr4 (9-149)||(51320992-51321132)
chr4 (9-149)||(54853463-54853603)
chr4 (9-149)||(32322162-32322302)
chr4 (9-149)||(37915898-37916038)
chr4 (9-149)||(23987285-23987415)
chr4 (9-149)||(32950831-32950971)
chr4 (14-149)||(41881077-41881212)
chr4 (15-137)||(3436670-3436792)
chr4 (9-146)||(55302914-55303051)
chr4 (9-149)||(7007445-7007585)
chr4 (9-138)||(41725196-41725322)
chr4 (15-149)||(12113022-12113156)
chr4 (9-149)||(25331202-25331342)
chr4 (9-149)||(34228578-34228718)
chr4 (11-149)||(39479350-39479488)
chr4 (9-149)||(1112964-1113104)
chr4 (9-149)||(41320881-41321021)
chr4 (9-149)||(42786755-42786895)
chr4 (9-123)||(19740929-19741043)
chr4 (9-149)||(5800049-5800179)
chr4 (9-149)||(30967304-30967434)
chr4 (9-137)||(1044878-1045006)
chr4 (9-149)||(30009672-30009812)
chr4 (9-149)||(37046445-37046586)
chr4 (15-135)||(44770862-44770982)
chr4 (9-146)||(50018322-50018449)
chr4 (9-114)||(7249795-7249900)
chr4 (9-137)||(22202086-22202214)
chr4 (9-149)||(49501514-49501646)
chr4 (9-149)||(49507579-49507711)
chr4 (50-149)||(24736447-24736546)
chr4 (14-149)||(27454073-27454208)
chr4 (9-115)||(25446121-25446227)
chr4 (9-137)||(39307260-39307388)
chr4 (50-149)||(8711978-8712077)
chr4 (9-149)||(32684003-32684123)
chr4 (9-149)||(28483970-28484099)
chr4 (9-114)||(28541769-28541874)
chr4 (9-149)||(31314737-31314867)
chr4 (17-149)||(46635643-46635769)
chr4 (9-149)||(9163147-9163279)
chr4 (9-149)||(49834828-49834948)
chr4 (9-124)||(53275910-53276025)
chr4 (9-79)||(29649732-29649802)
chr4 (29-149)||(24130976-24131097)
chr4 (15-149)||(56445350-56445474)
chr4 (15-101)||(28371001-28371087)
chr4 (9-149)||(36479237-36479366)
chr4 (13-137)||(40537167-40537281)
chr4 (15-138)||(12913301-12913414)
chr4 (9-102)||(23465026-23465119)
chr4 (18-86)||(25504697-25504765)
chr4 (9-137)||(41581796-41581923)
chr4 (10-146)||(13400804-13400942)
chr4 (72-149)||(11090438-11090515)
chr4 (29-135)||(20021424-20021531)
chr4 (72-149)||(36727945-36728021)
[»] chr1 (44 HSPs)
chr1 (9-152)||(6312639-6312782)
chr1 (9-149)||(29396383-29396523)
chr1 (9-152)||(51701645-51701788)
chr1 (9-149)||(48177457-48177597)
chr1 (9-152)||(25612222-25612365)
chr1 (13-152)||(9322492-9322631)
chr1 (10-149)||(15835048-15835187)
chr1 (10-149)||(28387388-28387527)
chr1 (9-149)||(46328107-46328247)
chr1 (9-149)||(9577427-9577567)
chr1 (9-134)||(32588963-32589088)
chr1 (9-149)||(38536094-38536224)
chr1 (9-149)||(38558312-38558442)
chr1 (9-149)||(6304247-6304387)
chr1 (9-149)||(19451803-19451943)
chr1 (14-149)||(49198264-49198399)
chr1 (16-146)||(21222219-21222349)
chr1 (9-149)||(29219351-29219481)
chr1 (9-137)||(35279737-35279865)
chr1 (9-149)||(50192545-50192685)
chr1 (13-147)||(35679125-35679259)
chr1 (9-149)||(28824368-28824507)
chr1 (9-149)||(45760004-45760144)
chr1 (9-149)||(47780776-47780916)
chr1 (12-137)||(31572204-31572329)
chr1 (9-149)||(37014635-37014775)
chr1 (9-149)||(47654346-47654486)
chr1 (9-137)||(49418149-49418277)
chr1 (9-124)||(45536009-45536124)
chr1 (14-149)||(48668780-48668905)
chr1 (18-149)||(29556178-29556310)
chr1 (9-149)||(18798556-18798676)
chr1 (9-115)||(48524384-48524490)
chr1 (9-109)||(730214-730314)
chr1 (14-149)||(45272656-45272780)
chr1 (9-133)||(5495117-5495231)
chr1 (9-66)||(49230951-49231008)
chr1 (9-106)||(51085860-51085957)
chr1 (9-137)||(33025578-33025696)
chr1 (17-76)||(955823-955882)
chr1 (9-67)||(47784451-47784509)
chr1 (12-67)||(31622536-31622591)
chr1 (34-136)||(38319996-38320098)
chr1 (31-77)||(43885157-43885203)
[»] chr3 (62 HSPs)
chr3 (9-149)||(18749683-18749823)
chr3 (9-149)||(44906508-44906648)
chr3 (9-152)||(32580247-32580390)
chr3 (9-152)||(36674122-36674265)
chr3 (9-152)||(11431597-11431740)
chr3 (12-149)||(34484025-34484162)
chr3 (9-149)||(26107332-26107472)
chr3 (10-149)||(54628916-54629055)
chr3 (9-149)||(17946359-17946499)
chr3 (9-149)||(40897215-40897355)
chr3 (9-149)||(48379228-48379368)
chr3 (9-151)||(50903233-50903375)
chr3 (9-149)||(51737721-51737861)
chr3 (9-149)||(52810449-52810589)
chr3 (10-146)||(31646284-31646418)
chr3 (9-149)||(52617966-52618100)
chr3 (9-149)||(996081-996221)
chr3 (9-149)||(10139141-10139281)
chr3 (9-149)||(19253898-19254038)
chr3 (9-149)||(20498280-20498420)
chr3 (9-149)||(10728646-10728776)
chr3 (9-146)||(33807796-33807933)
chr3 (9-149)||(3206200-3206340)
chr3 (9-133)||(20833063-20833187)
chr3 (9-149)||(37820472-37820612)
chr3 (9-149)||(37454932-37455062)
chr3 (9-149)||(50762055-50762185)
chr3 (9-149)||(6589635-6589775)
chr3 (9-149)||(29448853-29448993)
chr3 (9-149)||(54625663-54625803)
chr3 (14-149)||(3999640-3999775)
chr3 (15-149)||(5825139-5825273)
chr3 (9-149)||(39038111-39038241)
chr3 (9-149)||(6035048-6035188)
chr3 (9-149)||(40246915-40247055)
chr3 (9-149)||(44762032-44762172)
chr3 (14-137)||(33996548-33996671)
chr3 (14-129)||(51699495-51699610)
chr3 (16-149)||(25418444-25418577)
chr3 (9-134)||(35337806-35337930)
chr3 (9-149)||(39842489-39842619)
chr3 (9-149)||(53929123-53929263)
chr3 (81-149)||(45862984-45863052)
chr3 (14-109)||(22057838-22057933)
chr3 (9-149)||(23753402-23753521)
chr3 (9-136)||(29030076-29030203)
chr3 (12-78)||(10660609-10660675)
chr3 (9-137)||(52114600-52114728)
chr3 (9-70)||(539478-539539)
chr3 (9-149)||(27899415-27899545)
chr3 (61-149)||(6131228-6131316)
chr3 (33-149)||(1439889-1440005)
chr3 (18-112)||(55235264-55235359)
chr3 (9-86)||(1440010-1440087)
chr3 (9-67)||(6975817-6975875)
chr3 (15-149)||(44276466-44276586)
chr3 (14-67)||(52080003-52080056)
chr3 (9-65)||(23535890-23535946)
chr3 (88-152)||(15492859-15492923)
chr3 (94-146)||(33807678-33807730)
chr3 (118-152)||(10660691-10660725)
chr3 (78-122)||(12103730-12103774)
[»] chr6 (17 HSPs)
chr6 (9-152)||(31895767-31895910)
chr6 (9-149)||(14262427-14262567)
chr6 (9-149)||(7497147-7497286)
chr6 (9-149)||(34759044-34759184)
chr6 (10-137)||(34773481-34773608)
chr6 (9-149)||(6197472-6197612)
chr6 (12-152)||(31067567-31067697)
chr6 (15-137)||(2300744-2300866)
chr6 (9-149)||(30385063-30385191)
chr6 (9-149)||(1391695-1391835)
chr6 (29-152)||(4200428-4200541)
chr6 (13-137)||(7051920-7052044)
chr6 (9-129)||(28002736-28002856)
chr6 (17-149)||(29076678-29076810)
chr6 (17-149)||(29111652-29111784)
chr6 (12-67)||(3848284-3848339)
chr6 (103-149)||(2238676-2238722)
[»] chr5 (25 HSPs)
chr5 (9-152)||(14000096-14000239)
chr5 (9-149)||(13926003-13926143)
chr5 (9-149)||(39852417-39852557)
chr5 (9-149)||(1152097-1152237)
chr5 (9-149)||(4550251-4550391)
chr5 (9-149)||(7947567-7947707)
chr5 (10-149)||(5949181-5949310)
chr5 (9-149)||(4240456-4240586)
chr5 (9-149)||(21147139-21147279)
chr5 (15-149)||(33656035-33656169)
chr5 (9-137)||(7016745-7016873)
chr5 (10-149)||(40013706-40013835)
chr5 (9-149)||(1461142-1461272)
chr5 (9-137)||(5272925-5273053)
chr5 (9-149)||(27458944-27459084)
chr5 (15-124)||(849225-849334)
chr5 (9-137)||(139345-139473)
chr5 (9-149)||(22746369-22746501)
chr5 (9-146)||(32157891-32158031)
chr5 (9-149)||(9689730-9689869)
chr5 (9-79)||(14465291-14465361)
chr5 (14-110)||(6460869-6460965)
chr5 (81-149)||(37014038-37014106)
chr5 (9-67)||(37013986-37014044)
chr5 (9-149)||(9220711-9220841)
[»] chr2 (37 HSPs)
chr2 (10-149)||(25288233-25288372)
chr2 (9-149)||(10657479-10657619)
chr2 (12-152)||(18177343-18177483)
chr2 (9-152)||(26788859-26788999)
chr2 (9-149)||(28844628-28844768)
chr2 (9-149)||(33135696-33135835)
chr2 (9-149)||(12407453-12407593)
chr2 (9-149)||(16269764-16269904)
chr2 (9-149)||(24776428-24776568)
chr2 (26-149)||(43078653-43078776)
chr2 (9-149)||(28740290-28740420)
chr2 (9-149)||(20605309-20605449)
chr2 (9-149)||(31170621-31170761)
chr2 (14-149)||(14198574-14198709)
chr2 (9-149)||(35317135-35317275)
chr2 (14-137)||(32125331-32125454)
chr2 (9-149)||(3463745-3463875)
chr2 (9-147)||(305464-305602)
chr2 (9-149)||(13833429-13833559)
chr2 (17-149)||(5093044-5093176)
chr2 (9-149)||(22551760-22551900)
chr2 (17-149)||(43847727-43847859)
chr2 (15-149)||(379016-379140)
chr2 (9-124)||(1789515-1789630)
chr2 (18-149)||(9120208-9120339)
chr2 (9-117)||(7026677-7026775)
chr2 (81-149)||(6224564-6224632)
chr2 (18-149)||(10125297-10125418)
chr2 (9-149)||(44765848-44765979)
chr2 (81-149)||(215235-215302)
chr2 (9-67)||(3574920-3574978)
chr2 (9-67)||(6224626-6224684)
chr2 (100-152)||(7027051-7027103)
chr2 (9-65)||(21370631-21370687)
chr2 (81-149)||(3574972-3575040)
chr2 (14-67)||(26601279-26601332)
chr2 (9-51)||(215320-215362)
[»] scaffold0543 (1 HSPs)
scaffold0543 (10-149)||(10633-10772)
[»] scaffold0110 (1 HSPs)
scaffold0110 (13-149)||(39612-39748)
[»] scaffold0054 (1 HSPs)
scaffold0054 (9-146)||(36905-37042)
[»] scaffold0042 (1 HSPs)
scaffold0042 (13-149)||(58071-58207)
[»] scaffold1504 (1 HSPs)
scaffold1504 (9-149)||(936-1075)
[»] scaffold0400 (1 HSPs)
scaffold0400 (9-149)||(15028-15168)
[»] scaffold0365 (1 HSPs)
scaffold0365 (9-149)||(15671-15811)
[»] scaffold0151 (1 HSPs)
scaffold0151 (9-149)||(38600-38739)
[»] scaffold0004 (1 HSPs)
scaffold0004 (9-149)||(102167-102307)
[»] scaffold0306 (1 HSPs)
scaffold0306 (9-149)||(13954-14084)
[»] scaffold0152 (2 HSPs)
scaffold0152 (9-149)||(21243-21373)
scaffold0152 (49-149)||(28463-28554)
[»] scaffold0113 (1 HSPs)
scaffold0113 (9-149)||(38890-39030)
[»] scaffold0037 (1 HSPs)
scaffold0037 (9-137)||(100283-100411)
[»] scaffold0839 (1 HSPs)
scaffold0839 (38-149)||(3687-3798)
[»] scaffold0347 (1 HSPs)
scaffold0347 (72-149)||(14895-14972)
[»] scaffold0276 (1 HSPs)
scaffold0276 (14-137)||(546-669)
[»] scaffold0922 (1 HSPs)
scaffold0922 (9-70)||(4272-4333)
[»] scaffold0007 (1 HSPs)
scaffold0007 (17-92)||(199905-199980)


Alignment Details
Target: chr8 (Bit Score: 133; Significance: 3e-69; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 9288591 - 9288451
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  9288591 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 9288492  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  9288491 aagtctttcatgaaaagatgagatttcttgagattgttttt 9288451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 14782269 - 14782126
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  14782269 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14782170  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14782169 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 14782126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 44725944 - 44725801
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  44725944 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 44725845  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  44725844 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 44725801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 10295515 - 10295374
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatttt-gtgagattttgtagtgtaattttaacatgaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||    
T  10295515 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaa 10295416  T
Q  108 aaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  10295415 aaagtctttcatgaaaagatgagatttcttgagattgttttt 10295374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 18958861 - 18958721
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||    
T  18958861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaa 18958762  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  18958761 aagtctttcatgaaaagattagattttttgagattgttttt 18958721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 19718015 - 19717875
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| ||||    
T  19718015 gtcttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaa 19717916  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  19717915 aagtcttttatgaaaagatgagatttcttgagattgttttt 19717875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 43166824 - 43166684
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  43166824 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 43166725  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  43166724 aagtttttcatgaaaagatgagatttcttgagattggtttt 43166684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 39467602 - 39467462
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  39467602 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39467503  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||||||||||||| ||||||||||||||    
T  39467502 aaatctttcatgaaaagatgagattttttgagattgttttt 39467462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 26856139 - 26856279
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  26856139 gtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26856238  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||  |||| || |||||||||||||||||||||    
T  26856239 aagtctttcagaaaaaaataagatttcttgagattgttttt 26856279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 4403184 - 4403319
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| |||||||||||||||| |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||| ||||||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattgttttt 4403319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 24501947 - 24501807
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  24501947 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 24501848  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  24501847 aagtctttcatgaaaacatgagatttcttaggattgttttt 24501807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 26374564 - 26374424
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  26374564 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 26374465  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  26374464 aagtctttcatgaaaacatgagatttcttaggattgttttt 26374424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 42937423 - 42937563
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||| |||    
T  42937423 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaa 42937522  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42937523 aagtctttcatgaaaacatgagatttcttatgattgttttt 42937563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 42938251 - 42938111
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| | |||||    
T  42938251 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaa 42938152  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42938151 aagtctttcatgaaaacatgagatttcttaggattgttttt 42938111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 18306095 - 18305968
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          || ||||||||||||||||||||||| ||||    
T  18306095 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 18306006  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18306005 aagtctttcatgaaaagatgagatttcttgagattgtt 18305968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 7466407 - 7466537
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||          || ||||||||||||||||||||||| ||||    
T  7466407 gtcttgtggtattcaaaatcattcaaattttgaagaattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 7466496  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  7466497 aagtctttcatgaaaagatgagatttcttgagattgttttt 7466537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 32497597 - 32497727
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||          || ||||||||||||||||||||||| || |    
T  32497597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaga 32497686  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  32497687 aagtctttcatgaaaagatgagatttcttgagattgttttt 32497727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16362268 - 16362398
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  16362268 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 16362357  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||| || |||||||||||||||||||||||||||||    
T  16362358 aaatcttttataaaaagatgagatttcttgagattgttttt 16362398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 2704953 - 2704813
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||   ||||||||| |||||||| |||||| |||||  |||||| |||||||    
T  2704953 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaa 2704854  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  2704853 aagtctttcatgaaaacatgagatttcttaggattgttttt 2704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 7507033 - 7506893
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||| ||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  7507033 gtctagtggtattcaaaaccattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7506934  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||| ||| ||||||||||||  ||||||||||    
T  7506933 aagtctttcatgtaaacatgagatttcttaggattgttttt 7506893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 42735411 - 42735271
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| | |||||    
T  42735411 gtctagtggtattcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 42735312  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||  ||||||||||    
T  42735311 aagtctttcataaaaacatgagatttcttaggattgttttt 42735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 5576749 - 5576614
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||| |||||||||||||   |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  5576749 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 5576650  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||| ||||||| ||||||||||||  ||||||||||    
T  5576649 ttttatgaaaacatgagatttcttaggattgttttt 5576614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 10392371 - 10392246
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  10392371 gtctagtggtattcagaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10392272  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    || ||||||||||||| |||||||||    
T  10392271 aaatctttcatgaaaacatgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 37857191 - 37857321
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||          |||||||||||||||||| |||| ||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatg----------gattttgtagtgtaatttgaacaagaaa 37857280  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  37857281 aaatctttcatgaaaagatgagatttcttgagattgttttt 37857321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 42305918 - 42305789
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||          ||||||||||||||||||||||| |||||    
T  42305918 tcttgtggtattcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatg----------gattttgtagtgtaattttaacaagaaaa 42305829  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  42305828 agtcattcatgaaaaaatgagatttcttgagattgttttt 42305789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 23115302 - 23115163
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||| |||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| || || ||||||  |||||||    
T  23115302 gtctagtggtattcaaa-tcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaa 23115204  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  23115203 aagtctttcatgaaaacatgagattccttaggattgttttt 23115163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 39189940 - 39189810
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttg-tgagattttgtagtgtaattttaacatgaaaaagtctt 115  Q
    |||||||| |||||||||||||||||||||||||||||||||| || ||||||| |||||| ||| ||||| ||||  |||||||||| |||||| ||||    
T  39189940 gtattcaacatcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatga-attttctagt-aaattttaacaagaaaaaatctt 39189844  T
Q  116 tcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| ||||||||||||| ||||||||||    
T  39189843 tcatgaaaacatgagatttcttgggattgttttt 39189810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 31623767 - 31623887
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||||| ||||    
T  31623767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgga--------------------ttttgtagtgtaattttaacaagaaa 31623846  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| |||||||||||||| |||||||||||||||||||||    
T  31623847 aagtttttcatgaaaagataagatttcttgagattgttttt 31623887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 4950150 - 4950010
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||| ||||||||||||||||||| |||| || |||| ||||||||||| |||||||||| | ||||||  ||||| ||||| ||||||| |||||||    
T  4950150 gtcttggggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaa 4950051  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || | ||||||| ||| || ||||||||| | |||||||||    
T  4950050 aaatatttcatgcaaacataagatttcttaaaattgttttt 4950010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 4031392 - 4031334
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031392 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 43959734 - 43959859
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||          |||||||| ||| ||||||| ||||||||||||    
T  43959734 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatg----------gattttgtggtgaaattttagcatgaaaaagtc 43959823  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||| || |||| ||||||||||||  ||||||||||    
T  43959824 tttaattaaaacatgagatttcttatgattgttttt 43959859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 123
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgaga--ttttgtagtgtaattttaacatgaaaaagt 112  Q
    ||||||||||||||||| |||||| ||||||||||||| ||||||||| ||||||| |||||||| ||  |||| ||||| |||||||  |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  113 ctttcatgaaa 123  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 124
Target Start/End: Complemental strand, 13478384 - 13478269
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||| ||||| | || |||||||  |||||| |||   ||||||| ||||| |    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgata 13478285  T
Q  109 aagtctttcatgaaaa 124  Q
    |||||||| |||||||    
T  13478284 aagtcttttatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 41479175 - 41479299
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||||||| |||||||||||||||  |||||||          || |||||| ||||  ||||||| ||||||||| |||    
T  41479175 tggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttg----------tgggattttctagtaaaattttagcatgaaaaaatct 41479264  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  41479265 ttcatgaaaacatgagatttcttaggattgttttt 41479299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 127
Target Start/End: Complemental strand, 4031340 - 4031294
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagat 127  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  4031340 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 32711416 - 32711358
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||    
T  32711416 gtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttg 32711358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 9770545 - 9770497
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 66  Q
    |||||||||| ||||||||||| ||| ||| ||||||||||||||||||    
T  9770545 tattcaaaataattcaaatttcaaagaattatttaataaattggatttt 9770497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 41070018 - 41070074
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 66  Q
    |||||||||||| |||||||||| |||||| || |||||||| |||||||| |||||    
T  41070018 tcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaattgaatttt 41070074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 132; Significance: 1e-68; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 23101364 - 23101507
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  23101364 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 23101463  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  23101464 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 23101507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 28342413 - 28342556
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  28342413 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 28342512  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28342513 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 28342556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 39784165 - 39784308
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  39784165 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 39784264  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  39784265 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 39784308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 3022992 - 3023132
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  3022992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 3023091  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  3023092 aagtttttcatgaaaagatgagatttcttgagattgttttt 3023132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 29614898 - 29614755
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  29614898 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 29614799  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  29614798 aagtctttcatgaaaagatgagatttcttgagattatttttatt 29614755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 18838455 - 18838595
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  18838455 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18838554  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  18838555 aagtatttcatgaaaagatgagatttcttgagattgttttt 18838595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 28034939 - 28034799
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||  |||    
T  28034939 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaa 28034840  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  28034839 aagtctttcatgaaaagatgagatttcttgagattgttttt 28034799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 7993208 - 7993348
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||| ||||||||||||||||||||||| ||||    
T  7993208 gtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaa 7993307  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  7993308 aagtctttcatgaaaagataagatttcttgagattgttttt 7993348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 8675399 - 8675539
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  8675399 gtcttgtggtattcaaaatcatttaaacttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 8675498  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||| ||||||||||||||||||||||||||||||||    
T  8675499 aaatcttttatgaaaagatgagatttcttgagattgttttt 8675539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 9882370 - 9882231
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||    
T  9882370 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaa 9882271  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  9882270 aagtctttcat-aaaaaatgagatttcttgagattgttttt 9882231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 33382709 - 33382843
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||    
T  33382709 tggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 33382808  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||||||| || |||||||||||    
T  33382809 tttatgaaaagatgagatttatttagattgttttt 33382843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 47914339 - 47914479
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  47914339 gtctagtgatattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 47914438  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  47914439 aagtctttcatgaaaacatgagatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 44256895 - 44256760
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||  ||||||| ||||||||||||||| ||||||||     
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtt 44256796  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||| |||| ||||||||| ||||||||||||||    
T  44256795 tttcatcaaaatatgagattttttgagattgttttt 44256760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 12893487 - 12893621
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| |||||||||||||    
T  12893487 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtct 12893586  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  12893587 ttcatgaaaacatgagatttcttaggattgttttt 12893621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 509722 - 509855
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||||||||||  ||||||||| ||||    
T  509722 gtcttgtggtattcaaaatcattcaaatttcgaacgattgtttaataaattggattttgatg----------gattttgtagtgggattttaacaagaaa 509811  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  509812 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 509855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 7718496 - 7718356
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  7718496 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7718397  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| ||||||||||||  ||||||||||    
T  7718396 aaatctttcatgaaaacatgagatttcttaggattgttttt 7718356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 37972981 - 37972861
Alignment:
Q  29 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatg 128  Q
    ||||||||||||||||||| |||||||||||||||||||||| |||||| | |||||| |||||||||||||||| ||||||||||||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  129 agatttcttgagattgttttt 149  Q
    ||| |||||||||||||||||    
T  37972881 agacttcttgagattgttttt 37972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 40996783 - 40996643
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||  |||||| ||||| ||||||| |||||||    
T  40996783 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 40996684  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  40996683 aagtctttcatgaaaacatgagatttcttaggattgttttt 40996643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 43581224 - 43581096
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  43581224 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 43581125  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  43581124 aagtctttcatgaaaacatgagatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 44122033 - 44121904
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||    
T  44122033 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaaa 44121944  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||| ||||||||||||||||| ||||||||||||||    
T  44121943 agtctttaatgaaaagatgagattttttgagattgttttt 44121904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 973262 - 973397
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| || |||||||||    
T  973262 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtc 973361  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  973362 tttcatgaaaacatgagatttcttaggattgttttt 973397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 7719389 - 7719254
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  7719389 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 7719290  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  7719289 tttcatgaaaacatgagatttcttaggattgttttt 7719254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 12740439 - 12740577
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||  |||||||| |||||| |||||||||||||||| || |    
T  12740439 gtctcgtggtattcaaaatcattcaaatttcaaaggattgtttaataaat-ggattttgatagattttgtgggattttatagtgtaattttaacaagaga 12740537  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttt 148  Q
    ||||||||||| ||||||||||||||||| ||||||||||    
T  12740538 aagtctttcataaaaagatgagatttcttaagattgtttt 12740577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 34695351 - 34695486
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  34695351 gtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 34695450  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  34695451 tttcatgaaaacatgagatttcttaggattgttttt 34695486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 43187485 - 43187351
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||  |||||| ||||| |||||||||| ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| | ||||||||| ||| ||||||||||    
T  43187385 ttcatgaagacatgagattttttgggattgttttt 43187351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 40460841 - 40460711
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  40460841 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 40460752  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| ||||||||||||||||||||||||    
T  40460751 aaatctttcatgaaaatatgagatttcttgagattgttttt 40460711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 18914869 - 18914729
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||| |||| |||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  18914869 gtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 18914770  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  18914769 aagtctttcatgaaaacatgagatttcttaggattgttttt 18914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 30440869 - 30441009
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| |||||||  ||||||    
T  30440869 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaa 30440968  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| |||||| ||||||||||||  ||||||||||    
T  30440969 aagtctttcgtgaaaacatgagatttcttaggattgttttt 30441009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 29 - 149
Target Start/End: Original strand, 41827390 - 41827510
Alignment:
Q  29 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatg 128  Q
    ||||||| || ||||||||||||||||||||||||||||||| |||||||| |||| |||||||||||||||||| ||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  129 agatttcttgagattgttttt 149  Q
    |||||||||||||||||||||    
T  41827490 agatttcttgagattgttttt 41827510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 32143046 - 32142911
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  32143046 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 32142947  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||| |||| |||||||||||| |||||||||||    
T  32142946 ttccataaaaacatgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 44343525 - 44343390
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  44343525 gtggtatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 44343426  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| ||||| ||||||||||||  ||||||||||    
T  44343425 tttcacgaaaacatgagatttcttaggattgttttt 44343390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 10068533 - 10068673
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||  ||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  10068533 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10068632  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| |||||| |||| ||||||||| ||  ||||||||||    
T  10068633 aagtatttcataaaaacatgagatttgttaggattgttttt 10068673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 20275397 - 20275269
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  20275397 gtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 20275298  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||| ||||||||  ||||||||||||    
T  20275297 aagtctgtcatgaaagcatgagatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 47879241 - 47879381
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||||||  ||||||||||||||||||  |||||||||| ||||||||  ||||| ||||| ||||||| |||||||    
T  47879241 gtctagtgatattcaaaatcattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 47879340  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  47879341 aagtctttcatgaaaacatgagatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 29585580 - 29585710
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||          ||||||||||||||||||||||| ||||    
T  29585580 gtcttctggtattcaaaatcattcaaattttgaaggattgtttaataatttggattttgatg----------gattttgtagtgtaattttaacaagaaa 29585669  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  29585670 aagtctttcataaaaagatgaaatttcttgagattgttttt 29585710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 37327993 - 37328123
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||          ||||||||||| |||||||||||  |||    
T  37327993 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatg----------gattttgtagtataattttaacaaaaaa 37328082  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||| |||||| ||||||||||||||    
T  37328083 aagtctttcatgaaaagataagattttttgagattgttttt 37328123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 46405565 - 46405435
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||          |||||||| |||||||||||||| ||||    
T  46405565 gtcttgtggtattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgatg----------gattttgtggtgtaattttaacaagaaa 46405476  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||| || |||||||||||||||||||||||||||||    
T  46405475 aagtatttaataaaaagatgagatttcttgagattgttttt 46405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 32883848 - 32883948
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| |||| ||| ||||||||||||||||||||||| ||||    
T  32883848 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaa 32883947  T
Q  109 a 109  Q
    |    
T  32883948 a 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 34009091 - 34009226
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||| || |  ||||||| ||| ||||||||    
T  34009091 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtc 34009190  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| ||||| ||||||||||||  ||||||||||    
T  34009191 tttcaagaaaacatgagatttcttaggattgttttt 34009226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 39219504 - 39219371
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||| || | ||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||||||||    
T  39219504 tggtattcaaaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 39219406  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| |||| ||||||||||||  ||||||||||    
T  39219405 ttcataaaaacatgagatttcttaggattgttttt 39219371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 114
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  114 t 114  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 7113530 - 7113665
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  |||||||||  |||||||| |||||| |||   ||||||| ||||||||||||    
T  7113530 gtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtc 7113629  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  7113630 tttcatgaaaacatgaaatttcttaggattgttttt 7113665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 33892384 - 33892269
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||          ||||||||||||||||||| ||||    
T  33892384 gtcttgtggtattcaaaatcattcaaatttcgaatgattgttaaataaattggatttttatgaatt----------ttgtagtgtaattttaacaagaaa 33892295  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    ||||||||||| ||||||||||||||    
T  33892294 aagtctttcattaaaagatgagattt 33892269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 12963767 - 12963902
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||| |||||||  | ||||    
T  12963767 gtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaa 12963866  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||  |      ||||||||||||||||||||||||    
T  12963867 aagtctttttt-----catgagatttcttgagattgttttt 12963902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 39028163 - 39028293
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||| |||||||| |||| |||||||||||||||||||||||||||          ||||||||||||||| ||||||| ||||    
T  39028163 gtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatg----------gattttgtagtgtaactttaacaagaaa 39028252  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| |||||||||||   ||||||||||||||||||||||    
T  39028253 aagtttttcatgaaaaacagagatttcttgagattgttttt 39028293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 113
Target Start/End: Original strand, 25805761 - 25805862
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaag 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||| |||||| || |  ||||||| ||||||||||    
T  25805761 ttgtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaag 25805860  T
Q  112 tc 113  Q
    ||    
T  25805861 tc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 19251605 - 19251672
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatttt 76  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19251605 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttt 19251672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 19810874 - 19810996
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttc 117  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||  ||||||| |          |||| ||||||| ||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttct----------agtgaaattttagcataaaaatgtctttc 19810963  T
Q  118 atgaaaagatgagatttcttgagattgttttta 150  Q
    ||||||| |||||||||||||||||||||||||    
T  19810964 atgaaaacatgagatttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 10676546 - 10676460
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaaca 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||  ||||| | ||| ||||||||||    
T  10676546 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttggatggattttatggaattttcttgtgaaattttaaca 10676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 17001152 - 17001037
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||| ||||| |||||||||    
T  17001152 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattataacaagaaaaagtc 17001073  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||||||||||||| |||||||||    
T  17001072 tttcatgaaaatatgagatttcttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 9179946 - 9180076
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||| |||||||| | ||||| |||||||||||||||||||||||          |||||||| |||||| ||||| | ||||| ||| |||    
T  9179946 gtcttgtggtatacaaaatcacttaaattccgaaggattgtttaataaattgg----------attttgtgggattttctagtgaatttttagcataaaa 9180035  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  9180036 aagtctttcatgaaaacatgagatttcttaggattgttttt 9180076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 31638948 - 31639015
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatttt 76  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||    
T  31638948 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 3797191 - 3797061
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||| |||||| |||||| |||||||||||||||||||| ||||||||         || |||||| ||||| ||||||| |||||||    
T  3797191 gtcttgtggtattcaagatcattaaaattttgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaa 3797101  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| | ||||| || |||||||||  ||||||||||    
T  3797100 aagtcttttaagaaaacat-agatttcttaggattgttttt 3797061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 140
Target Start/End: Original strand, 47066822 - 47066881
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgag 140  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||    
T  47066822 gattttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatttcttgag 47066881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 12 - 70
Target Start/End: Original strand, 447852 - 447910
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 70  Q
    |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatg 447910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 727594 - 727691
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtcttt 116  Q
    ||||||||||||||||||||||| ||||||||||||||||||  |          |||||||| |||||| ||||| ||||||| |||||||||||||||    
T  727594 gtattcaaaatcattcaaatttcaaaggattgtttaataaatcag----------attttgtgggattttctagtgaaattttagcatgaaaaagtcttt 727683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 116
Target Start/End: Complemental strand, 1470364 - 1470261
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaag 111  Q
    ||||||||||||||||| |||||||||  ||| |||||||||| |||| ||||||||| | ||||||| |||||| |  |  ||||||| |||||||||     
T  1470364 ttgtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgat-agttttgtgggattttctgataaaattttagcatgaaaaaa 1470266  T
Q  112 tcttt 116  Q
    |||||    
T  1470265 tcttt 1470261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 49 - 92
Target Start/End: Original strand, 10617024 - 10617067
Alignment:
Q  49 tttaataaattggattttgatgaattttgtgagattttgtagtg 92  Q
    ||||||||||| |||||||||| ||||||||||||||| |||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtg 10617067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 44623410 - 44623343
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatttt 76  Q
    |||| ||| |||||||||||||||| ||||| || || |||||||||||||| ||||||  |||||||    
T  44623410 gtctcgtgatattcaaaatcattcatatttctaaagactgtttaataaattgaattttgtggaatttt 44623343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 132; Significance: 1e-68; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 5441475 - 5441618
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  5441475 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 5441574  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5441575 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 5441618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 27768127 - 27768270
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  27768127 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 27768226  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  27768227 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 27768270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 54341215 - 54341358
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  54341215 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 54341314  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  54341315 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 54341358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 37828537 - 37828394
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||    
T  37828537 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaa 37828438  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  37828437 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 37828394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 48261198 - 48261341
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    || ||||||||||||| |||||||||||||||||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttatt 48261341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 51320992 - 51321132
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||| |||||||||||||||| ||||    
T  51320992 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaa 51321091  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  51321092 aagtttttcatgaaaagatgagatttcttgagattgttttt 51321132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 54853603 - 54853463
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  54853603 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 54853504  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  54853503 aaatctttcatgaaaagatgagatttcttgagattgttttt 54853463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 32322162 - 32322302
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| | ||||    
T  32322162 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 32322261  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    | ||||||||| |||||||||||||||||||||||||||||    
T  32322262 atgtctttcataaaaagatgagatttcttgagattgttttt 32322302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 37915898 - 37916038
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||    
T  37915898 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtacttttaacaagaaa 37915997  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| ||||||||||||| |||||| ||||||||||||||    
T  37915998 aagtcattcatgaaaagataagatttattgagattgttttt 37916038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 23987285 - 23987415
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||| ||||    
T  23987285 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatg----------gattttgtagtgtaattttaacaagaaa 23987374  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23987375 aagtctttcatgaaaagatgagatttcttgagattgttttt 23987415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 32950971 - 32950831
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| |||||||    
T  32950971 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaa 32950872  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| |||||||||||| ||||| |||||    
T  32950871 aattctttcatgaaaacatgagatttcttaagatttttttt 32950831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 41881212 - 41881077
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  41881212 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 41881113  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  41881112 tttcatgaaaacatgagatttcttaggattgttttt 41881077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 3436670 - 3436792
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||| ||||||||||||||||||| |    
T  3436670 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttgtagtgaaattttaacatgaaaaagttt 3436769  T
Q  115 ttcatgaaaagatgagatttctt 137  Q
    |||||||||| || |||||||||    
T  3436770 ttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 55302914 - 55303051
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| || ||||| |||||| ||||| ||||||| |||||||    
T  55302914 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaa 55303013  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |||||||||||||||| |||||||||||| ||||||||    
T  55303014 aagtctttcatgaaaacatgagatttcttaagattgtt 55303051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 7007445 - 7007585
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| |||||||    
T  7007445 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaa 7007544  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |  | ||||||||||| |||||||||||| |||||||||||    
T  7007545 atttttttcatgaaaacatgagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 9 - 138
Target Start/End: Original strand, 41725196 - 41725322
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||| |||||| |||||||||||||||| ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  109 aagtctttcatgaaaagatgagatttcttg 138  Q
    || |||||||||||||||||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttcttg 41725322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 12113022 - 12113156
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||||||||  ||||| ||||| ||||||| |||||||||||||    
T  12113022 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 12113121  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||| ||||||||||    
T  12113122 ttcatgaaaacatgagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 25331202 - 25331342
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  25331202 gtctagtgatattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 25331301  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  25331302 aagtctttcatgaaaacatgagatttcttaggattgttttt 25331342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 34228718 - 34228578
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| |||||||||| |||||||||||||||  |||||||||| |||||||  |||||| ||||| ||||||| |||||||    
T  34228718 gtctagtggtattcaaaatcattgaaatttcgaatgattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 34228619  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  34228618 aagtctttcatgaaaacatgagatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 39479488 - 39479350
Alignment:
Q  11 cttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaa 110  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| || ||||||    
T  39479488 cttgtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaa 39479389  T
Q  111 gtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||  ||||||||||||  ||||||||||    
T  39479388 gtctttcatgaaagcatgagatttcttaggattgttttt 39479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 1112964 - 1113104
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||| || |||||||||||||||  |||||||||| |||||||| |||||  ||||  |||||||||||||||    
T  1112964 gtctagtggtattcaaaatcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaa 1113063  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  1113064 aagtctttcatgaaaacatgagatttcttaggattgttttt 1113104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| ||| || ||||| |||||||  ||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||||||| |||||| ||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 42786755 - 42786895
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||  ||||| ||||| ||||||| ||| |||    
T  42786755 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttatcataaaa 42786854  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  42786855 aagtctttcatgaaaacatgagatttcttatgattgttttt 42786895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 123
Target Start/End: Complemental strand, 19741043 - 19740929
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||||| ||||| ||||||| | |||||    
T  19741043 gtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaa 19740944  T
Q  109 aagtctttcatgaaa 123  Q
    |||||||||||||||    
T  19740943 aagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 5800049 - 5800179
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||| |||||||||||| ||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattt----------tgtgagattttgtagagtaattttaacaagaaa 5800138  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| |||||||||| |||||| ||||||||||||||    
T  5800139 aagtctttaatgaaaagataagattttttgagattgttttt 5800179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 30967434 - 30967304
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||          || ||||||||||||||||||||||| ||||    
T  30967434 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 30967345  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| || |||||||||||||||||||||    
T  30967344 aaatctttcatgaaaaaataagatttcttgagattgttttt 30967304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 1044878 - 1045006
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||| ||||||| |||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  1044878 gtctagtggtattcaaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 1044977  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| || |||||||||    
T  1044978 aagtctttcatgaaaacataagatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 30009812 - 30009672
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| ||||||  || |||||||||||||||  |||||||||| |||||||| |||||| ||||  ||||||| |||||||    
T  30009812 gtctagtggtattcaaaatcatttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaa 30009713  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  30009712 aagtctttcatgaaaacatgagatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 37046586 - 37046445
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtg-taattttaacatgaa 107  Q
    |||| ||| |||| ||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||| |||||  ||||||| ||||||    
T  37046586 gtctagtgatatttaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaa 37046487  T
Q  108 aaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||| ||||||||||||  ||||||||||    
T  37046486 aaagtctttcatgaaaatatgagatttcttaggattgttttt 37046445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||| |||||| ||||| |||||||| | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  115 ttcatgaaaagatgagatttc 135  Q
    |||||||  | ||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 50018322 - 50018449
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||| |||          ||||||||||||||||||||||| ||||    
T  50018322 gtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatg----------gattttgtagtgtaattttaacaagaaa 50018411  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  50018412 aagtctttcaagaaaagatgagatttattgagattgtt 50018449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 114
Target Start/End: Complemental strand, 7249900 - 7249795
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  7249900 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7249801  T
Q  109 aagtct 114  Q
    ||||||    
T  7249800 aagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 22202086 - 22202214
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| ||||||| || |||||||||||||||   ||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  22202086 gtctagtggtattcaaaatcattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 22202185  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| || |||||||||    
T  22202186 aagtctttcatgaaaacattagatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 49501646 - 49501514
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||          ||||||  |||||||||||||||||||||| ||||    
T  49501646 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggat----------tttgtggaattttgtagtgtaattttaacaagaaa 49501557  T
Q  109 aagtctttc--atgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||  || |||||||||||||||||||||||||||||    
T  49501556 aagtctttcatataaaaagatgagatttcttgagattgttttt 49501514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 49507711 - 49507579
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||          ||||||  |||||||||||||||||||||| ||||    
T  49507711 gtcttgtggcattcaaaatcattcaaatttcgaatgattgtttaataaattggat----------tttgtggaattttgtagtgtaattttaacaagaaa 49507622  T
Q  109 aagtctttc--atgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||  || |||||||||||||||||||||||||||||    
T  49507621 aagtctttcatataaaaagatgagatttcttgagattgttttt 49507579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 24736447 - 24736546
Alignment:
Q  50 ttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||| ||| |||||||||||||||| ||||||||||||| ||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 27454208 - 27454073
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||| ||| |||| ||||||||||  |||||||||||||||||||  ||||| ||||| ||||||  ||||||||||||    
T  27454208 gtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaagtc 27454109  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| || | |||| || |||||||||||    
T  27454108 tttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 25446121 - 25446227
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  25446121 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 25446220  T
Q  109 aagtctt 115  Q
    |||||||    
T  25446221 aagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 39307388 - 39307260
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||| ||||||||||||||| || |||| |||||| |||||  ||||||||||||||||| |||||| ||||| |||||||||||||||    
T  39307388 gtcttgtggtattcataatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaa 39307289  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||| | | || |||| ||||||||||||    
T  39307288 aagtttctgataaaaacatgagatttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 149
Target Start/End: Original strand, 8711978 - 8712077
Alignment:
Q  50 ttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||| |||||||| |||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgttttt 8712077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 32684123 - 32684003
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||| ||||    
T  32684123 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt--------------------tgtagtgtaattttaacaagaaa 32684044  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  32684043 aagtctttcatgaaaagatgagatttattgagattgttttt 32684003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 28483970 - 28484099
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||||||          |||||||  ||||||||||||||| ||||||| ||||    
T  28483970 gtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg----------attttgtaggattttgtagtgtaa-tttaacaagaaa 28484058  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||| |||||||||| ||||| |||||    
T  28484059 aagtctttcatgaaaagacgagatttcttaagattattttt 28484099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 28541769 - 28541874
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| ||||||||  ||||| ||||| ||||||| |||||||    
T  28541769 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 28541868  T
Q  109 aagtct 114  Q
    ||||||    
T  28541869 aagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 31314867 - 31314737
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||          || |||||| ||||| ||||||| |||||||    
T  31314867 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttg----------tgggattttctagtgaaattttagcatgaaa 31314778  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  31314777 aagtctttcatgaaaacatgagatttcttaggattgttttt 31314737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 46635769 - 46635643
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtcttt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||       |||||||| |||||| ||||| ||||||| |||||||||||||||    
T  46635769 gtattcaaaatcattcaaatttcgaaggattgtttaataaataagattg------attttgtgggattttttagtgaaattttagcatgaaaaagtcttt 46635676  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||||||  ||||||||||    
T  46635675 cataaaaacatgagatttcttaggattgttttt 46635643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 9163147 - 9163279
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||  ||||| ||||| ||||||| ||||||     
T  9163147 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa- 9163245  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
           ||||||||| ||||||||||||  ||||||||||    
T  9163246 -------tcatgaaaacatgagatttcttatgattgttttt 9163279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 49834948 - 49834828
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||| |||     
T  49834948 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaag 49834869  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  49834868 aagtctttcattaaaagatgagatttcttgagattgttttt 49834828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 53275910 - 53276025
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||| ||||||||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||||| || |  ||||||| |||||||    
T  53275910 gtctagtgatatttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaa 53276009  T
Q  109 aagtctttcatgaaaa 124  Q
    ||||||||||| ||||    
T  53276010 aagtctttcattaaaa 53276025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 29649802 - 29649732
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtg 79  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  29649802 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtg 29649732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 24131097 - 24130976
Alignment:
Q  29 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatg-aaaaagtctttcatgaaaagat 127  Q
    |||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| |||||||  ||| ||||| ||||||||||||| ||    
T  24131097 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacat 24130998  T
Q  128 gagatttcttgagattgttttt 149  Q
    ||||||||||  ||||||||||    
T  24130997 gagatttcttaggattgttttt 24130976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||          |||||| |||||| ||||| || |||| || ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggat----------tttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||| || | ||||||||||||||||||||||||    
T  56445384 ttcataaagacatgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 15 - 101
Target Start/End: Original strand, 28371001 - 28371087
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaa 101  Q
    ||||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||||| |||||| ||||| ||||||||    
T  28371001 tggtattcaaaatcattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaattttaa 28371087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 36479366 - 36479237
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| |||||           ||||| ||||||| ||  |||    
T  36479366 gtctcgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaa 36479278  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||| |||||||||||||||||| |||||    
T  36479277 aagtcttttatgaaaacatgagatttcttgagattattttt 36479237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 137
Target Start/End: Complemental strand, 40537281 - 40537167
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||  ||||||||||          |||||||| ||| ||||||| |||||||||||    
T  40537281 tgtggtattcaaaatcatttaaatttcgaatgattgtttaataaatctgattttgatg----------gattttgtggtgaaattttagcatgaaaaagt 40537192  T
Q  113 ctttcatgaaaagatgagatttctt 137  Q
    |||||||||||| ||||||||||||    
T  40537191 ctttcatgaaaacatgagatttctt 40537167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 15 - 138
Target Start/End: Original strand, 12913301 - 12913414
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||          |||||||| |||||| ||||| |||||||||| |||||||| |    
T  12913301 tggtattcaaaatcattcaaattttgaaggattgtttaataaattgg----------attttgtgggattttctagtgaaattttaacaagaaaaagtat 12913390  T
Q  115 ttcatgaaaagatgagatttcttg 138  Q
    |||||||| | |||||||||||||    
T  12913391 ttcatgaagacatgagatttcttg 12913414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 102
Target Start/End: Original strand, 23465026 - 23465119
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaac 102  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||||  || ||||||| |||||||| |||||| ||||  |||||||||    
T  23465026 gtctagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaattttaac 23465119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 25504765 - 25504697
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagatttt 86  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||    
T  25504765 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatttt 25504697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 41581923 - 41581796
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatg-aa 107  Q
    |||| |||||||| | | |||||||||||| |||  ||||||||||||||||||  |||||  |||||||| |||||| ||||| |||||||||||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattgga--ttgatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  108 aaagtctttcatgaaaagatgagatttctt 137  Q
    ||| | ||||||| ||| ||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 13400942 - 13400804
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaa--taaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaa 107  Q
    |||||| ||||| |||| ||||| ||||| || |||| ||||||  |||||||| |||||||||||||||||||||||| || || || |||  ||| ||    
T  13400942 tcttgtagtattgaaaaacattctaattttgagggatagtttaaaataaattgggttttgatgaattttgtgagattttttaatgaaaatttttcataaa 13400843  T
Q  108 aaagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||| ||||  || |||| |||||||||||  ||||||||    
T  13400842 aaaatcttctattaaaacatgagatttctatagattgtt 13400804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 11090438 - 11090515
Alignment:
Q  72 attttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| |||||| ||||| ||||||| ||| ||||||||||| || |||| ||||||||||||  ||||||||||    
T  11090438 attttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgttttt 11090515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 135
Target Start/End: Original strand, 20021424 - 20021531
Alignment:
Q  29 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaac-atgaaaaagtctttcatgaaaagat 127  Q
    ||||||||||  ||||||||||||||||||| ||||||| || ||||| || |||||| || || ||||||||| |  ||||| ||||||||||| | ||    
T  20021424 attcaaattttaaaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacat 20021523  T
Q  128 gagatttc 135  Q
     |||||||    
T  20021524 aagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 72 - 149
Target Start/End: Complemental strand, 36728021 - 36727945
Alignment:
Q  72 attttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||  |||||| ||||| |||||||||| |||||| |||||||||| |  ||||||||| ||||||||||||||    
T  36728021 attttgtaggattttttagtgaaattttaacaagaaaaaatctttcatgagac-atgagattttttgagattgttttt 36727945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 132; Significance: 1e-68; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 6312639 - 6312782
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  6312639 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 6312738  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  6312739 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 6312782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 29396523 - 29396383
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  29396523 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 29396424  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29396423 aagtctttcatgaaaagatgagatttcttgagattgttttt 29396383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 51701645 - 51701788
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  51701645 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 51701744  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  51701745 aagtctttcatgaaaagatgagattttttgagattgtttttatt 51701788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 48177597 - 48177457
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  48177597 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48177498  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  48177497 aagtctttcatgaaaagatgagatttcttgagattgttttt 48177457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 25612222 - 25612365
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||    
T  25612222 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaa 25612321  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25612322 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 25612365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 13 - 152
Target Start/End: Complemental strand, 9322631 - 9322492
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||| ||||||||    
T  9322631 tgtggtattcaaaatcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagt 9322532  T
Q  113 ctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9322531 ctttcatgaaaagatgagatttcttgagattgtttttatt 9322492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 15835187 - 15835048
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||| |||||    
T  15835187 tcttgtggtattcaaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaa 15835088  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  15835087 agtctttcatgaaaagatgagatttcttgagattgttttt 15835048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 28387527 - 28387388
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||||||||  ||||    
T  28387527 tcttgtggtattcaaattcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaa 28387428  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  28387427 agtctttcataaaaagatgagatttcttgagattgttttt 28387388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 46328107 - 46328247
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  46328107 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 46328206  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||| |||||||| || |||||||||    
T  46328207 aagtctttcataaaaagataagatttctcgaaattgttttt 46328247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 9577567 - 9577427
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |||||||  ||||||    
T  9577567 gtcttgtgatattcaaaatcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaa 9577468  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||| ||||||||||||| ||||||||||    
T  9577467 aaatctttcatgaaaacatgagatttcttgggattgttttt 9577427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 134
Target Start/End: Complemental strand, 32589088 - 32588963
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||| ||| |||    
T  32589088 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaa 32588989  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    |||||||||||||||| |||||||||    
T  32588988 aagtctttcatgaaaacatgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 38536224 - 38536094
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  38536224 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 38536135  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38536134 aagtctttcatgaaaagatgagatttcttgagattgttttt 38536094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 38558442 - 38558312
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  38558442 gtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 38558353  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  38558352 aagtctttcatgaaaagatgagatttcttgagattgttttt 38558312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 6304387 - 6304247
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  6304387 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6304288  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  6304287 aagtctttcatgaaaacatgaaatttcttatgattgttttt 6304247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 19451943 - 19451803
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  19451943 gtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 19451844  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  19451843 aagtctttcatgaaaacatgagatttcttatgattgttttt 19451803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 49198399 - 49198264
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||    
T  49198399 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 49198300  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||  ||||||||||    
T  49198299 tttcatgaaaacatgatatttcttaggattgttttt 49198264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 21222219 - 21222349
Alignment:
Q  16 ggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctt 115  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||||    
T  21222219 ggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 21222318  T
Q  116 tcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||||| ||||||||||||  |||||||    
T  21222319 tcatgaaaacatgagatttcttaggattgtt 21222349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 29219351 - 29219481
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  29219351 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 29219440  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  29219441 aagtatttcatgaaaagatgagatttcttgagattgttttt 29219481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 35279737 - 35279865
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||| |||||||||    
T  35279737 gtctagtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaa 35279836  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  35279837 aagtctttcatgaaaacatgagatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 50192685 - 50192545
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  50192685 gtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 50192586  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||| ||  ||||||||||    
T  50192585 aagtctttcatgaaaacatgagattttttaggattgttttt 50192545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 13 - 147
Target Start/End: Complemental strand, 35679259 - 35679125
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||  || |||||| ||||| ||||||| |||||||||||    
T  35679259 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagt 35679160  T
Q  113 ctttcatgaaaagatgagatttcttgagattgttt 147  Q
    |||||||||| | |||||||||||| |||||||||    
T  35679159 ctttcatgaagacatgagatttcttaagattgttt 35679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 28824507 - 28824368
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| |||||||| |||||| ||| | |||||||||||||||    
T  28824507 gtcttgtggtattcaaaatcattcaaatttcgaag-attgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaa 28824409  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| || |||| ||||||||||||  ||||||||||    
T  28824408 aagtcttttataaaaacatgagatttcttaggattgttttt 28824368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 45760144 - 45760004
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  45760144 gtctagtggtattcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45760045  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||| ||||||| ||||||||||||  ||||||||||    
T  45760044 aagtatttgatgaaaacatgagatttcttaggattgttttt 45760004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 47780776 - 47780916
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||| ||  ||||||||||||||||||  |||||||||| |||||||| |||||| ||||| |||||||||||||||    
T  47780776 gtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaa 47780875  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| |||||||||||| |||||||||||    
T  47780876 aagtttttcatgaaaacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 12 - 137
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaag 111  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| |||||||  |||||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  112 tctttcatgaaaagatgagatttctt 137  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 37014775 - 37014635
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| |||||||||||||||||||||| || |||||||| |||||||| ||||||||| |||||||  |||||| ||||| ||||||| |||||||    
T  37014775 gtcttgtgatattcaaaatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaa 37014676  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||| |||| |||| |||||||||||| |||||||||||    
T  37014675 aagtctctcataaaaacatgagatttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 47654486 - 47654346
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||| ||| | ||||||| |||||||    
T  47654486 gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaa 47654387  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| ||||||||||||  ||||||||||    
T  47654386 aagtatttcatgaaaacatgagatttcttaggattgttttt 47654346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 49418149 - 49418277
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||||| |||||| || || ||||||| |||||||    
T  49418149 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaa 49418248  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    || ||||||||||||| ||||||||||||    
T  49418249 aaatctttcatgaaaatatgagatttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 45536009 - 45536124
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  45536009 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 45536108  T
Q  109 aagtctttcatgaaaa 124  Q
    ||||||||||||||||    
T  45536109 aagtctttcatgaaaa 45536124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 48668905 - 48668780
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||          || |||| |||||||||||||||||| |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaattggattttg----------tgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||| ||| ||||||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattgttttt 48668780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 29556178 - 29556310
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttc 117  Q
    ||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| || |||||| || || ||||||| | |||||||||||||     
T  29556178 tattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggattttatgggattttctaatgaaattttagcttgaaaaagtctttt 29556277  T
Q  118 atgaaa-agatgagatttcttgagattgttttt 149  Q
    |||||| | ||||||||||||  ||||||||||    
T  29556278 atgaaacacatgagatttcttaggattgttttt 29556310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 18798556 - 18798676
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||||||| ||||    
T  18798556 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatt--------------------ttgtagtgtaattttaacaagaaa 18798635  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  18798636 aagtctttcatgaaaagatgagatttctagagattgttttt 18798676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 9 - 115
Target Start/End: Original strand, 48524384 - 48524490
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||||||||||||| ||| |||||||||||||||  | |||||||| |||||||| |||||| ||||| |||||||||||||||    
T  48524384 gtcttgtgatattcaaaatcattcaaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaa 48524483  T
Q  109 aagtctt 115  Q
    |||||||    
T  48524484 aagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 109
Target Start/End: Original strand, 730214 - 730314
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||| | ||||||||||||||  |||||||||| ||||||||||||||| ||||| ||||||| |||||||    
T  730214 gtctagtggtattcaaaatcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaa 730313  T
Q  109 a 109  Q
    |    
T  730314 a 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 149
Target Start/End: Original strand, 45272656 - 45272780
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||| ||| |||||||||||||| ||||||||||||||||||          |||||||||||||||||||||||||||| |||||| ||    
T  45272656 gtggtattcaaaattatttaaatttcgaaggat-gtttaataaattggattt----------tgtgagattttgtagtgtaattttaacaagaaaaaatc 45272744  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||| || |||||||||||||| ||||||||||||||    
T  45272745 ttttataaaaagatgagattttttgagattgttttt 45272780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 133
Target Start/End: Complemental strand, 5495231 - 5495117
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| ||||||| ||||||| |||||||||||||||||||          || ||||||||||||||||||||||| ||||    
T  5495231 gtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 5495142  T
Q  109 aagtctttcatgaaaagatgagatt 133  Q
    ||||| || ||||||||||||||||    
T  5495141 aagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 66
Target Start/End: Original strand, 49230951 - 49231008
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 66  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  49230951 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 9 - 106
Target Start/End: Original strand, 51085860 - 51085957
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatga 106  Q
    |||| |||||||||||||| |||||||||| |||||||| || ||||||||||||||||||||||||||||  ||||| | ||| |||||||| ||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaattttaatatga 51085957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 33025578 - 33025696
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| ||  |          |||||||| |||||| || |  ||||||| |||||||    
T  33025578 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaatacatcag----------attttgtgggattttctaataaaattttagcatgaaa 33025667  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  33025668 aagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 76
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaatttt 76  Q
    |||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 47784451 - 47784509
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    ||||||||||||||||||| ||||||| ||| || ||||||||||||||||||||||||    
T  47784451 gtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaattggattttg 47784509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Complemental strand, 31622591 - 31622536
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||| ||||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 34 - 136
Target Start/End: Original strand, 38319996 - 38320098
Alignment:
Q  34 aatttcgaaggattgtttaataaattggattttgatgaattttgt-gagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagat 132  Q
    ||||| ||| ||||||||| ||||| ||||||||||  ||||||| | | |||| ||||| ||||||| ||  ||||||||||||||||||| |||| ||    
T  38319996 aattttgaatgattgtttactaaataggattttgatagattttgttgggtttttttagtg-aattttagcacaaaaaagtctttcatgaaaatatgatat 38320094  T
Q  133 ttct 136  Q
    ||||    
T  38320095 ttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 77
Target Start/End: Complemental strand, 43885203 - 43885157
Alignment:
Q  31 tcaaatttcgaaggattgtttaataaattggattttgatgaattttg 77  Q
    |||||||| ||| |||| |||||||||||||||||||||| ||||||    
T  43885203 tcaaattttgaatgattatttaataaattggattttgatggattttg 43885157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 129; Significance: 7e-67; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 18749683 - 18749823
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  18749683 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 18749782  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18749783 aagtctttcatgaaaagatgagatttcttgagattgttttt 18749823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 44906648 - 44906508
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  44906648 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaa 44906549  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    | |||||||||||||||||||||||||||||||||||||||    
T  44906548 atgtctttcatgaaaagatgagatttcttgagattgttttt 44906508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 32580247 - 32580390
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||| ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 32580390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 36674265 - 36674122
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  36674265 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36674166  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  36674165 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 36674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 11431597 - 11431740
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||    
T  11431597 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaa 11431696  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  11431697 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 11431740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 34484162 - 34484025
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||     
T  34484162 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaa 34484063  T
Q  112 tctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34484062 tctttcatgaaaagatgagatttcttgagattgttttt 34484025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 26107332 - 26107472
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  26107332 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaa 26107431  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| |||||| |||||||||||||||||||||||||||||    
T  26107432 aagtatttcataaaaagatgagatttcttgagattgttttt 26107472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 54628916 - 54629055
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  54628916 tcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 54629015  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  54629016 agtctttcataaaaagatgagatttcttgagattgttttt 54629055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 17946359 - 17946499
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  17946359 gtctcgtgatattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 17946458  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  17946459 aagtctttcatgaaaagatgagatttcttgagattgttttt 17946499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 40897215 - 40897355
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||    
T  40897215 gtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaa 40897314  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  40897315 aagtctttcatgaaaagatgagatttcttgatattgttttt 40897355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 48379228 - 48379368
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||||| | ||||    
T  48379228 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaa 48379327  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    | ||||||||||||||||| |||||||||||||||||||||    
T  48379328 atgtctttcatgaaaagatcagatttcttgagattgttttt 48379368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 9 - 151
Target Start/End: Complemental strand, 50903375 - 50903233
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  50903375 gtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 50903276  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttat 151  Q
    || ||||| ||||||| ||||||||||||||||||||||||||    
T  50903275 aaatcttttatgaaaatatgagatttcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 51737861 - 51737721
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  51737861 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaa 51737762  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||| ||  |||||||||||||||||    
T  51737761 aagtctttcataaaaagataagtattcttgagattgttttt 51737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 52810449 - 52810589
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||||||| ||||    
T  52810449 gtcttgtggtattcaaaatcattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaa 52810548  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  52810549 aaatctttcatgaaaagatgagatttcttgagattgttttt 52810589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 31646418 - 31646284
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||    
T  31646418 tcttgtggtattcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaa 31646319  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||||||||||  |||||||||||||||||||||    
T  31646318 agtctttcatgaaa--atgagatttcttgagattgtt 31646284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 52618100 - 52617966
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||          
T  52618100 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------ 52618007  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  52618006 aagtctttcataaaaagatgagatttcttgagattgttttt 52617966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 996221 - 996081
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  996221 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 996122  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  996121 aagtctttcatgaaaacatgagatttcttaggattgttttt 996081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 10139281 - 10139141
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  10139281 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 10139182  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  10139181 aagtctttcatgaaaacatgagatttcttaggattgttttt 10139141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 19253898 - 19254038
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  19253898 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 19253997  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  19253998 aagtctttcatgaaaacatgagatttcttaggattgttttt 19254038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 20498280 - 20498420
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  20498280 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 20498379  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  20498380 aagtctttcatgaaaacatgagatttcttaggattgttttt 20498420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 10728776 - 10728646
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  10728776 gtcttgtggtatttaaaatcattcaaatttggaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 10728687  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  10728686 aagtctttcatgaaaagatgagatttcttgagattgttttt 10728646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 33807933 - 33807796
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  33807933 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 33807834  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |||||||||||||||| ||||||||||||  |||||||    
T  33807833 aagtctttcatgaaaacatgagatttcttaggattgtt 33807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 3206340 - 3206200
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| || ||||    
T  3206340 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaa 3206241  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  3206240 aagtctttcatgaaaacatgagatttcttatgattgttttt 3206200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 133
Target Start/End: Original strand, 20833063 - 20833187
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||| ||||    
T  20833063 gtcttgtggtattcaaaatcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaa 20833162  T
Q  109 aagtctttcatgaaaagatgagatt 133  Q
    |||| |||||||||||||| |||||    
T  20833163 aagtatttcatgaaaagataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 37820612 - 37820472
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||  |||| ||||||| |||||||    
T  37820612 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaa 37820513  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  37820512 aagtctttcataaaaacatgagatttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 37454932 - 37455062
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||| ||||||||||||||||||||||| ||||    
T  37454932 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattg----------aattttgtgggattttgtagtgtaattttaacaagaaa 37455021  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  37455022 aagtatttcatgaaaagatgagatttcttgagattgttttt 37455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 50762185 - 50762055
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  50762185 gtcttgtggtattcaaaatcattctaatttcgaatgattgtttgataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 50762096  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  50762095 aagtctttcatgaaaagatgagatttcttgagattgttttt 50762055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 6589635 - 6589775
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  6589635 gtctagtggtattcaaaatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6589734  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  6589735 aagtctttcatgaaaacatgagatttcttaggattgttttt 6589775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 29448993 - 29448853
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||  ||||||| ||| |||    
T  29448993 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaa 29448894  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  29448893 aagtctttcatgaaaacatgagatttcttaggattgttttt 29448853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 54625663 - 54625803
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  54625663 gtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 54625762  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| |||||||||||| |||||| ||||    
T  54625763 aagtttttcatgaaaacatgagatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 3999775 - 3999640
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| |||||||  |||||||||||    
T  3999775 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtc 3999676  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||| |||| ||||||||||||  ||||||||||    
T  3999675 tttcataaaaacatgagatttcttaggattgttttt 3999640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 5825139 - 5825273
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||| ||||| |||| || |||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  5825239 ttcatgaaaacatgagatttcttatgattgttttt 5825273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 39038111 - 39038241
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  39038111 gtcttgtggtatccaaaatcattcaaatttcgaagaattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 39038200  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||||||||| |||||||||    
T  39038201 aagtctttcataaaaagatgagatttcttgaaattgttttt 39038241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 6035188 - 6035048
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||| |||||||| |||||| ||||  ||||||| |||||||    
T  6035188 gtctcgtgatattcaaaatcattcaaatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaa 6035089  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| |||||||||||| |||||||||||    
T  6035088 aagtctttcataaaaacatgagatttcttaagattgttttt 6035048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 40246915 - 40247055
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||  |||||||    
T  40246915 gtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 40247014  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  40247015 aagtctttcatgaaaacatgagattccttatgattgttttt 40247055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 44762172 - 44762032
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||| ||||| |||||| |||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  44762172 gtctagtggtatttaaaattattcaagtttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaa 44762073  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||| |||||||||||| |||||||||||    
T  44762072 aagtcttttatgaaaacatgagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 33996671 - 33996548
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||| | |||||| ||||| ||||||| ||||||||||||    
T  33996671 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtc 33996572  T
Q  114 tttcatgaaaagatgagatttctt 137  Q
    ||| || |||| ||||||||||||    
T  33996571 ttttataaaaacatgagatttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 14 - 129
Target Start/End: Complemental strand, 51699610 - 51699495
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||| |||||| ||||| ||||||| ||||||||| ||    
T  51699610 gtggtattcaaaatcattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatc 51699511  T
Q  114 tttcatgaaaagatga 129  Q
    |||| |||||| ||||    
T  51699510 tttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 149
Target Start/End: Original strand, 25418444 - 25418577
Alignment:
Q  16 ggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctt 115  Q
    |||||||||||||||||||||||  ||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||  ||||||||||| ||    
T  25418444 ggtattcaaaatcattcaaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatt 25418543  T
Q  116 tcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| |||||||| |||  ||||||||||    
T  25418544 tcatgaaaacatgagattccttaggattgttttt 25418577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 134
Target Start/End: Original strand, 35337806 - 35337930
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||  ||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  35337806 gtctagtggtattcaaaaaaattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 35337905  T
Q  109 aagtctttcatgaaaagatgagattt 134  Q
    |||| ||||||||||| |||||||||    
T  35337906 aagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 39842619 - 39842489
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| |          ||||||||| ||||||||||||| ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacg----------gattttgtaatgtaattttaacaagaaa 39842530  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattgttttt 39842489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 53929263 - 53929123
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| |||| ||||| |||||||||||||||  |||||||||| |||||||  |||||| ||||| ||||||| |||||||    
T  53929263 gtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaa 53929164  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||| ||||||| ||||||||| ||  ||||||||||    
T  53929163 aaatctttaatgaaaacatgagattttttaggattgttttt 53929123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 45862984 - 45863052
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  45862984 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 45863052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 109
Target Start/End: Original strand, 22057838 - 22057933
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||||||||||||    
T  22057838 gtggtatttaaaatcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 23753521 - 23753402
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||                    |||||||||||||||||||| ||||    
T  23753521 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggat--------------------tttgtagtgtaattttaacaagaaa 23753442  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  23753441 aagtctttcatg-aaagatgagatttcttgagattgttttt 23753402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 29030076 - 29030203
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||||  ||||| || || ||||||||||||||     
T  29030076 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaat 29030175  T
Q  109 aagtctttcatgaaaagatgagatttct 136  Q
       | ||| ||||||| |||||||||||    
T  29030176 tttttttttatgaaaacatgagatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 10660609 - 10660675
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgt 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10660609 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 52114600 - 52114728
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||| |||||||||||| |||||||||||||||||  |||||||||  ||||||||  ||||| ||||  ||||||| |||||||    
T  52114600 gtctagtggtattcaaaataattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaa 52114699  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    || |||||  |||||| ||||||||||||    
T  52114700 aaatcttttgtgaaaacatgagatttctt 52114728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Complemental strand, 539539 - 539478
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 70  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatg 539478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 27899415 - 27899545
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |          |||||||  |||||| ||||| ||||||| |||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag----------attttgtaggattttctagtgaaattttagcatgaaa 27899504  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattgttttt 27899545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 149
Target Start/End: Complemental strand, 6131316 - 6131228
Alignment:
Q  61 gattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| |||||||| |||||| ||||| ||||||| ||||||||||||||||||||||| ||||||||||||  ||||||||||    
T  6131316 gattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgttttt 6131228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 33 - 149
Target Start/End: Complemental strand, 1440005 - 1439889
Alignment:
Q  33 aaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagat 132  Q
    |||||| |||||||||||||||||||| |||||||||  |||||||| |||||| ||||  ||||||   |||||||||||||||| ||||| |||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  133 ttcttgagattgttttt 149  Q
    || ||  ||||||||||    
T  1439905 tttttaggattgttttt 1439889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 112
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgat-gaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    ||||||||||||||||||||||||| |||||||||||||||||| ||||||| || ||||||| |||||| || || ||||||| ||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 9 - 86
Target Start/End: Complemental strand, 1440087 - 1440010
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagatttt 86  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| ||||| || ||||||    
T  1440087 gtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttatgggatttt 1440010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 6975817 - 6975875
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    ||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| ||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaattggaatttg 6975875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 44276466 - 44276586
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||    ||||||||||||||||||||||||||          || |||||| ||||| |||||||||| |||||| |||    
T  44276466 tggtattcaaaatcattcaaatt----aggattgtttaataaattggattttg----------tgggattttctagtgaaattttaacaagaaaaaatct 44276551  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| | ||||||||| ||| |||| |||||    
T  44276552 ttcatgaagacatgagattttttgggattattttt 44276586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 67
Target Start/End: Original strand, 52080003 - 52080056
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  |||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttg 52080056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 23535946 - 23535890
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 65  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||| |||| |||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 15492923 - 15492859
Alignment:
Q  88 tagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||| |||||||||| |||||| |||||||||||   || ||||||||||||||||||||||||    
T  15492923 tagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgtttttatt 15492859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 33807730 - 33807678
Alignment:
Q  94 aattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||  |||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattgtt 33807678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 118 - 152
Target Start/End: Original strand, 10660691 - 10660725
Alignment:
Q  118 atgaaaagatgagatttcttgagattgtttttatt 152  Q
    |||||||||||||||||||||||||||||||||||    
T  10660691 atgaaaagatgagatttcttgagattgtttttatt 10660725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 12103730 - 12103774
Alignment:
Q  78 tgagattttgtagtgtaattttaacatgaaaaagtctttcatgaa 122  Q
    ||||||||| ||||| |||||||||| ||| ||||||||||||||    
T  12103730 tgagattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 128; Significance: 3e-66; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 31895767 - 31895910
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| ||||    
T  31895767 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaa 31895866  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31895867 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 31895910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 14262567 - 14262427
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  14262567 gtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14262468  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  14262467 aagtctttcatgaaaagatgggatttcttgagattgttttt 14262427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 7497147 - 7497286
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  7497147 gtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggattttgatggattttgtg-gattttgtagtgtaattttaacaagaaa 7497245  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  7497246 aagtctttcatgaaaagatgagatttcttgagattattttt 7497286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 34759184 - 34759044
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  34759184 gtcttgtggtattcaaaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 34759085  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || |||||||||||||||||||||||||||||||| |||||    
T  34759084 aaatctttcatgaaaagatgagatttcttgagattattttt 34759044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 137
Target Start/End: Original strand, 34773481 - 34773608
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||| |||||    
T  34773481 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaa 34773580  T
Q  110 agtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||||||||||||||||||||    
T  34773581 agtctttcatgaaaagatgagatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 6197612 - 6197472
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  6197612 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 6197513  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  6197512 aagtctttcatgaaaacatgagatttcttaggattgttttt 6197472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 31067567 - 31067697
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          || ||||||||||||||||||||||| |||||||    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaag 31067656  T
Q  112 tctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  31067657 tctttcataaaaagatgagatttcttgagattgtttttatt 31067697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 15 - 137
Target Start/End: Complemental strand, 2300866 - 2300744
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||| ||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||||||||    
T  2300866 tggtattgaaaatcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 2300767  T
Q  115 ttcatgaaaagatgagatttctt 137  Q
    |||||||||| ||||||||||||    
T  2300766 ttcatgaaaacatgagatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 30385191 - 30385063
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          || |||||||||||||||||||||||  | |    
T  30385191 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaaca--aca 30385104  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  30385103 aagtctttcatgaaaagatgagatttcttgagattgttttt 30385063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 1391695 - 1391835
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||  |||||||    
T  1391695 gtctagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 1391794  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  1391795 aagtctttcatgaaaacatgagattccttaggattgttttt 1391835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 29 - 152
Target Start/End: Complemental strand, 4200541 - 4200428
Alignment:
Q  29 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatg 128  Q
    ||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T
Q  129 agatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||    
T  4200451 agatttcttgagattgtttttatt 4200428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 13 - 137
Target Start/End: Original strand, 7051920 - 7052044
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||| ||||  ||||||| |||||||||||    
T  7051920 tgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagt 7052019  T
Q  113 ctttcatgaaaagatgagatttctt 137  Q
     |||||| |||  ||||||||||||    
T  7052020 ttttcataaaatcatgagatttctt 7052044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 28002736 - 28002856
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||| |||||||    
T  28002736 gtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaa 28002835  T
Q  109 aagtctttcatgaaaagatga 129  Q
    |||||||||||||||| ||||    
T  28002836 aagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 29076678 - 29076810
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtcttt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| |  |||||| ||||| ||||||| ||||||||| |||||    
T  29076678 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatcttt 29076777  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||| ||  ||||||||||    
T  29076778 cataaaaacatgagattttttaggattgttttt 29076810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 29111652 - 29111784
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtcttt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| |  |||||| ||||| ||||||| ||||||||| |||||    
T  29111652 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatcttt 29111751  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||| ||  ||||||||||    
T  29111752 cataaaaacatgagattttttaggattgttttt 29111784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 67
Target Start/End: Original strand, 3848284 - 3848339
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||||||||||||||||||| |||||| ||| ||||||||||||||||| ||||||    
T  3848284 ttgtggtattcaaaatcatttaaattttgaatgattgtttaataaattgaattttg 3848339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 149
Target Start/End: Original strand, 2238676 - 2238722
Alignment:
Q  103 atgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||||||||| |||||||||||| |||||||||||    
T  2238676 atgaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 128; Significance: 3e-66; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 14000239 - 14000096
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  14000239 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 14000140  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  14000139 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 14000096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 13926003 - 13926143
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  13926003 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 13926102  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  13926103 aagtctttcaagaaaagatgatatttcttgagattgttttt 13926143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 39852417 - 39852557
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttcttgagattgttttt 39852557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 1152237 - 1152097
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  1152237 gtcttgtggtattcaaaatcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 1152138  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  1152137 aagtcttttatgaaaagatgagatttcttaagattgttttt 1152097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 4550391 - 4550251
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||    
T  4550391 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaa 4550292  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
     ||||||||||||||||||||||||| ||||||||||||||    
T  4550291 gagtctttcatgaaaagatgagatttgttgagattgttttt 4550251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 7947707 - 7947567
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||    
T  7947707 gtcttgcgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaa 7947608  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  7947607 aagtctttcatgaaaagaagagatttcttgaaattgttttt 7947567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 5949181 - 5949310
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| |||||    
T  5949181 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaaa 5949270  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  5949271 agtctttcatgaaaagatgagatttcttgagattgttttt 5949310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 4240586 - 4240456
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  4240586 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 4240497  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  4240496 aagtctttcatgaatagatgagatttcttgagattgttttt 4240456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 21147139 - 21147279
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  21147139 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 21147238  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  21147239 aagtctttcatgaaaacatgagatttcttaggattgttttt 21147279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 15 - 149
Target Start/End: Complemental strand, 33656169 - 33656035
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||||||||    
T  33656169 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 33656070  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||| ||||||||||||  ||||||||||    
T  33656069 ttcatgaaaatatgagatttcttaggattgttttt 33656035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 7016873 - 7016745
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  7016873 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 7016774  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||| |||| ||||||||||||    
T  7016773 aagtctttcataaaaacatgagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 40013835 - 40013706
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| |||          ||||||||||||||||||||||| |||||    
T  40013835 tcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatg----------gattttgtagtgtaattttaacaagaaaa 40013746  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40013745 agtctttcatgaaaagatgagatttcttgagattgttttt 40013706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 1461272 - 1461142
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||| ||||||||||||| ||||    
T  1461272 gtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtactgtaattttaacaagaaa 1461183  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || ||||||||||||||||||||||||||||||||||||||    
T  1461182 aaatctttcatgaaaagatgagatttcttgagattgttttt 1461142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 137
Target Start/End: Complemental strand, 5273053 - 5272925
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  5273053 gtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 5272954  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||| |||| ||||||||||||    
T  5272953 aagtctttcataaaaacatgagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 27459084 - 27458944
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||| |||| |||||||||||||||||||| |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  27459084 gtctagtggtattcaaaatcattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 27458985  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || || |||||||||| |||| |||||||  ||||||||||    
T  27458984 aaatcattcatgaaaacatgatatttcttaggattgttttt 27458944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 849225 - 849334
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||  |||||||||  |||||||| |||||| ||||| ||||||| |||||||||||||    
T  849225 tggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtct 849324  T
Q  115 ttcatgaaaa 124  Q
    ||||||||||    
T  849325 ttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 139345 - 139473
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||  ||||||  |||| |||||||| ||||||    
T  139345 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaa 139444  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    ||||||||||| |||| ||||||||||||    
T  139445 aagtctttcataaaaacatgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 22746369 - 22746501
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||| ||        ||||||||||||| ||||    
T  22746369 gtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtggga--------tgtaattttaacaagaaa 22746460  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    || |||||||||||||||| ||||||||| |||||||||||    
T  22746461 aactctttcatgaaaagataagatttcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 32158031 - 32157891
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||| ||||  ||||||| || ||||    
T  32158031 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaa 32157932  T
Q  109 a---agtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    |   ||||||||||||||| |||||||||||| | ||||||    
T  32157931 aaatagtctttcatgaaaacatgagatttcttaaaattgtt 32157891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 9689730 - 9689869
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||| ||||||||| |||||||||| |||||||| ||||||| |||||||||| ||| ||||||||||| | ||  |||||||  ||||||    
T  9689730 gtcttgtggtatttaaaatcatt-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaa 9689828  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| || |||||||||  ||||||||||    
T  9689829 aagtctttcataaaaacataagatttcttatgattgttttt 9689869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 14465361 - 14465291
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtg 79  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  14465361 gtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatgaattttgtg 14465291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 110
Target Start/End: Original strand, 6460869 - 6460965
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaa 110  Q
    ||||||||||||||||||||||||||||||| |||||||||||||  |||||||||| |||||| | |||||| ||||| ||||||| |||||||||    
T  6460869 gtggtattcaaaatcattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 37014038 - 37014106
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  37014038 gattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagatttcttgagattgttttt 37014106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 37013986 - 37014044
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37013986 gtcttgcggtattcaaaatcattcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 9220841 - 9220711
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||| || |||||||||||||||||||||| |||||||||||||| |||| |          | |||||  |||||| ||||  |||||||||| ||||    
T  9220841 gtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattag----------aatttgtaggattttatagtaaaattttaacacgaaa 9220752  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||| |||||| |||| |||||||  ||||||||||    
T  9220751 aagtctttcgtgaaaacatgatatttcttaggattgttttt 9220711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 7e-64; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 25288233 - 25288372
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||    
T  25288233 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaa 25288332  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
     |||||||||||||||||||||||||||||||||||||||    
T  25288333 cgtctttcatgaaaagatgagatttcttgagattgttttt 25288372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 10657479 - 10657619
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  10657479 gtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 10657578  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| |||||||||||||||| |||||||||||||||||||    
T  10657579 aagtatttcatgaaaagatgaaatttcttgagattgttttt 10657619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 12 - 152
Target Start/End: Original strand, 18177343 - 18177483
Alignment:
Q  12 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaag 111  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||    
T  18177343 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaag 18177442  T
Q  112 tctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    ||||| || ||||||||||||||||||||||||||||||||    
T  18177443 tctttaataaaaagatgagatttcttgagattgtttttatt 18177483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 9 - 152
Target Start/End: Original strand, 26788859 - 26788999
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  26788859 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 26788958  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    |||||||||||   ||||||||||||||||||||||||||||||    
T  26788959 aagtctttcat---aagatgagatttcttgagattgtttttatt 26788999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 28844628 - 28844768
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  |||||||||||||||||||| | ||||    
T  28844628 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaa 28844727  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28844728 aagtctttcataaaaagatgagatttcttgagattgttttt 28844768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 33135696 - 33135835
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  33135696 gtctcgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 33135795  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  33135796 aagtctttcat-aaaaaatgagatttcttgagattgttttt 33135835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 12407453 - 12407593
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  12407453 gtctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaa 12407552  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||||||| |||||||||||    
T  12407553 aagtctttcatgaaaacatgagatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 16269764 - 16269904
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  16269764 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaa 16269863  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  16269864 aagtctttcatgaaaacatgagatttcttaggattgttttt 16269904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 24776428 - 24776568
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  24776428 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 24776527  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  24776528 aagtctttcatgaaaacatgagatttcttaggattgttttt 24776568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 43078653 - 43078776
Alignment:
Q  26 atcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaag 125  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||| |||||||| |||||| |||||||||||||||||||||||||||||||| |||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  126 atgagatttcttgagattgttttt 149  Q
    || |||||||||||||||||||||    
T  43078753 ataagatttcttgagattgttttt 43078776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 28740420 - 28740290
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||| ||||    
T  28740420 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtggtgtaattttaacaagaaa 28740331  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28740330 aagtctttcataaaaagatgagatttcttgagattgttttt 28740290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 20605309 - 20605449
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  20605309 gtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 20605408  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  20605409 aagtctttcatgaaaacatgagatttcttaggattgttttt 20605449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 31170761 - 31170621
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  31170761 gtctagtggtattcaaaatcattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 31170662  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  31170661 aagtctttcatgaaaacatgagatttcttaggattgttttt 31170621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 14198709 - 14198574
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| ||||||||| ||    
T  14198709 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattc 14198610  T
Q  114 tttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| ||||||||||||  ||||||||||    
T  14198609 tttcatgaaaacatgagatttcttaggattgttttt 14198574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 35317135 - 35317275
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||||  ||||| ||||| ||||||| |||||||    
T  35317135 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 35317234  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| || ||||||||| | |||||||||    
T  35317235 aagtctttcatgaaaacataagatttcttaacattgttttt 35317275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 137
Target Start/End: Original strand, 32125331 - 32125454
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||  ||||||| ||||||||||||    
T  32125331 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtc 32125430  T
Q  114 tttcatgaaaagatgagatttctt 137  Q
    ||||||||||| ||||||||||||    
T  32125431 tttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 3463745 - 3463875
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||| |||||||||||| |||| ||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  3463745 gtcttgtggtatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 3463834  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  3463835 aagtctttcatgaaaatatgagatttcttgagattgttttt 3463875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 305602 - 305464
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||| ||| |||||||||||||||  ||||| |||| ||||||||||||||| ||||| |||||||  ||||||    
T  305602 gtctagtggtattcaaaatcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaa 305503  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttt 147  Q
    |||||||||||||||| ||||||||||||  ||||||||    
T  305502 aagtctttcatgaaaacatgagatttcttaggattgttt 305464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 13833559 - 13833429
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||          || ||||||||||||||||||||||| ||||    
T  13833559 gtcttctggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttg----------tgggattttgtagtgtaattttaacaagaaa 13833470  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||| |||||||||||||||||||||| ||||    
T  13833469 aagtctttcatgacaagatgagatttcttgagattgctttt 13833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 149
Target Start/End: Complemental strand, 5093176 - 5093044
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtcttt 116  Q
    |||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| || || ||||||| |||||||||||||||    
T  5093176 gtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtcttt 5093077  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    ||| |||| ||||||||||||  ||||||||||    
T  5093076 cataaaaacatgagatttcttaggattgttttt 5093044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 22551900 - 22551760
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||| |||||||||||||| ||||||||| ||||||  ||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  22551900 gtctagtggtattcaaaattattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaa 22551801  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||| ||||||||||| ||||||||||||  ||||||||||    
T  22551800 aagtatttcatgaaaacatgagatttcttatgattgttttt 22551760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 43847727 - 43847859
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtcttt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||  ||||| ||||| ||||||| ||||||||||||| |    
T  43847727 gtattcaaaatcattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgt 43847826  T
Q  117 catgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||||||||  ||||||||||    
T  43847827 catgaaaacatgagatttcttaggattgttttt 43847859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 149
Target Start/End: Original strand, 379016 - 379140
Alignment:
Q  15 tggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtct 114  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||          |||||||||||||||||||||||| |||||| ||     
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgat----------agattttgtagtgtaattttaacaagaaaaaatcg 379105  T
Q  115 ttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||| ||||||||||||||    
T  379106 ttcatgaaaagatgagatttattgagattgttttt 379140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 9 - 124
Target Start/End: Original strand, 1789515 - 1789630
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| || || ||||||| |||||||    
T  1789515 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaa 1789614  T
Q  109 aagtctttcatgaaaa 124  Q
    ||||||||||| ||||    
T  1789615 aagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 18 - 149
Target Start/End: Original strand, 9120208 - 9120339
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttc 117  Q
    |||||||||||||||| ||||  ||||||||||||||||||| |||||||||| |||||||| |||||| ||||| |||||||  ||| |||| ||||||    
T  9120208 tattcaaaatcattcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttc 9120307  T
Q  118 atgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||| ||||||||||||  ||||||||||    
T  9120308 atgaaaacatgagatttcttaggattgttttt 9120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 117
Target Start/End: Original strand, 7026677 - 7026775
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||| ||||    
T  7026677 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg----------gattttgtagtgtaattttaacaagaaa 7026766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 6224632 - 6224564
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  6224632 gattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgatattgttttt 6224564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 149
Target Start/End: Complemental strand, 10125418 - 10125297
Alignment:
Q  18 tattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttc 117  Q
    |||||||||||||||||||||| ||||||||||||||||||||          ||||||||| |||||| ||||| |||||||||| |||||||||||||    
T  10125418 tattcaaaatcattcaaatttcaaaggattgtttaataaattg----------aattttgtgggattttttagtgaaattttaacaagaaaaagtctttc 10125329  T
Q  118 atgaaaagatgagatttcttgagattgttttt 149  Q
    || |||| | |||||||||| |||||||||||    
T  10125328 ataaaaacacgagatttcttaagattgttttt 10125297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 44765848 - 44765979
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||        
T  44765848 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---- 44765943  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
         ||||||||||| ||||||||||||  ||||||||||    
T  44765944 -----tttcatgaaaacatgagatttcttaggattgttttt 44765979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 149
Target Start/End: Complemental strand, 215302 - 215235
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  215302 gattttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttcatgagattgttttt 215235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 67
Target Start/End: Original strand, 3574920 - 3574978
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3574920 gtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 67
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 7027051 - 7027103
Alignment:
Q  100 aacatgaaaaagtctttcatgaaaagatgagatttcttgagattgtttttatt 152  Q
    |||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttatt 7027103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattt 65  Q
    |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 149
Target Start/End: Original strand, 3574972 - 3575040
Alignment:
Q  81 gattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||  ||||| | |||| | ||||| |||||||||||||||||||||||    
T  3574972 gattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttcttgagattgttttt 3575040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 67
Target Start/End: Complemental strand, 26601332 - 26601279
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 67  Q
    ||||||||||||||||||||||||||||| | |||||||||||||  |||||||    
T  26601332 gtggtattcaaaatcattcaaatttcgaatgtttgtttaataaatcagattttg 26601279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 51
Target Start/End: Complemental strand, 215362 - 215320
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgttt 51  Q
    |||| |||||||||||||||||||||| ||| |||||||||||    
T  215362 gtctcgtggtattcaaaatcattcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 149
Target Start/End: Original strand, 10633 - 10772
Alignment:
Q  10 tcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaa 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||| |||||    
T  10633 tcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaa 10732  T
Q  110 agtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  10733 agtctttcatgaaaagatgagatttcttgagattgttttt 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 39748 - 39612
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  39748 tgtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagt 39649  T
Q  113 ctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||||||| |||||||||||||||||||||    
T  39648 ctttcatgaaaagataagatttcttgagattgttttt 39612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 110; Significance: 1e-55; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 37042 - 36905
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  37042 gtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 36943  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgtt 146  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  36942 aagtctttcatgaaaagataagatttcttgagattgtt 36905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 109; Significance: 6e-55; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 13 - 149
Target Start/End: Complemental strand, 58207 - 58071
Alignment:
Q  13 tgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagt 112  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||| || ||| |    
T  58207 tgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaat 58108  T
Q  113 ctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||    
T  58107 ctttcatgaaaagatgagatttcttgagattgttttt 58071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 936 - 1075
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||||||| ||| |||||||||| | ||||||||| |||||||| ||||||||||||||||||||||  ||||    
T  936 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttaataaatag-attttgatggattttgtgggattttgtagtgtaattttaactagaaa 1034  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  1035 aagtctttcattaaaatatgagatttcttgagattgttttt 1075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15168 - 15028
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  15168 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 15069  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  15068 aagtctttcatgaaaacatgaaatttcttaggattgttttt 15028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 15811 - 15671
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  15811 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 15712  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||| |||||||  ||||||||||    
T  15711 aagtctttcatgaaaacatgaaatttcttaggattgttttt 15671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 38739 - 38600
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  38739 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 38641  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| ||||||||||||  ||||||||||    
T  38640 aagtctttcatgaaaacatgagatttcttaggattgttttt 38600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 89; Significance: 5e-43; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 102167 - 102307
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||| |||||||    
T  102167 gtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaa 102266  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    ||||||||||| |||| ||||||||||||  ||||||||||    
T  102267 aagtctttcataaaaatatgagatttcttatgattgttttt 102307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 82; Significance: 8e-39; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 13954 - 14084
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||          ||||||||||||  ||||||| | ||||    
T  13954 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatg----------gattttgtagtgggattttaataagaaa 14043  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14044 aagtctttcatgaaaagatgagatttcttgagattgttttt 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 21373 - 21243
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||          ||||||||||||  ||||||| | ||||    
T  21373 gtcttgtggtattcaaaatcattcaaatttcaaaagattgtttaataaattggattttgatg----------gattttgtagtgggattttaataagaaa 21284  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21283 aagtctttcatgaaaagatgagatttcttgagattgttttt 21243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 49 - 149
Target Start/End: Original strand, 28463 - 28554
Alignment:
Q  49 tttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 148  Q
    |||||||||||||||||||||| ||||||         ||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  28463 tttaataaattggattttgatggattttg---------gtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttt 28553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 39030 - 38890
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||  |||||||||| |||||||| |||||| ||||| ||||||  |||||||    
T  39030 gtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaa 38931  T
Q  109 aagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||||||||||| |||||||| |||  ||||||||||    
T  38930 aagtctttcatgaaaacatgagattccttaggattgttttt 38890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 9 - 137
Target Start/End: Original strand, 100283 - 100411
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaa 108  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||   ||||||||| |||||||| | |||| ||||| |||||||||| ||||    
T  100283 gtctagtggtattcaaaatcattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaa 100382  T
Q  109 aagtctttcatgaaaagatgagatttctt 137  Q
    |||||||||||||||| ||||||||||||    
T  100383 aagtctttcatgaaaacatgagatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 38 - 149
Target Start/End: Complemental strand, 3798 - 3687
Alignment:
Q  38 tcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttctt 137  Q
    ||||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||| ||||||| | |||| ||    
T  3798 tcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatatttttt 3699  T
Q  138 gagattgttttt 149  Q
    ||||||||||||    
T  3698 gagattgttttt 3687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 72 - 149
Target Start/End: Original strand, 14895 - 14972
Alignment:
Q  72 attttgtgagattttgtagtgtaattttaacatgaaaaagtctttcatgaaaagatgagatttcttgagattgttttt 149  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  14895 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgttttt 14972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 137
Target Start/End: Complemental strand, 669 - 546
Alignment:
Q  14 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtgtaattttaacatgaaaaagtc 113  Q
    ||||||||||||||||||||||||| |||||||||||||||||||   ||||||||| ||||||||  ||||| ||||| ||||||   |||||||||||    
T  669 gtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgtggaattttctagtgaaattttggtatgaaaaagtc 570  T
Q  114 tttcatgaaaagatgagatttctt 137  Q
    ||| | ||||| ||||||||||||    
T  569 tttgacgaaaacatgagatttctt 546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 70
Target Start/End: Original strand, 4272 - 4333
Alignment:
Q  9 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatg 70  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4272 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatg 4333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 199905 - 199980
Alignment:
Q  17 gtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgagattttgtagtg 92  Q
    ||||| |||||||||||||||| ||| || |||||||||||||| ||||||||  ||||||||||||||| |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtg 199980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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