View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3597_low_20 (Length: 237)
Name: NF3597_low_20
Description: NF3597
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3597_low_20 |
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Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 8 - 222
Target Start/End: Complemental strand, 37192270 - 37192056
Alignment:
| Q |
8 |
aaatagttatagttgtacatacaatctgagttcaagtgcaacttttcaaatagtccaggttatacacatccaaaataagataaaactactagccagtgat |
107 |
Q |
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| T |
37192270 |
aaatagttatagttgtacatacaatctgagttcaagtgcaacttttcaaatagtccaggttatacacatccaaaataagataaaactactagccagtgat |
37192171 |
T |
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| Q |
108 |
gatttagaactcatttgtttaggaatcgcttttatttgttaacatatttagttttaatgtactataaaattttggggtaagcttttccaaaatgcagaat |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
37192170 |
gatttagaactcatttgtttaggaatcgcttttatttgttaacatatttagttttaatgcactataaaattttggggtaagcttttccaaaatgcagaat |
37192071 |
T |
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| Q |
208 |
gtcgagaatctattt |
222 |
Q |
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||||||||||||||| |
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| T |
37192070 |
gtcgagaatctattt |
37192056 |
T |
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