View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3599_high_1 (Length: 462)

Name: NF3599_high_1
Description: NF3599
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3599_high_1
NF3599_high_1
[»] scaffold0024 (2 HSPs)
scaffold0024 (4-446)||(33801-34240)
scaffold0024 (22-446)||(43103-43526)
[»] chr7 (2 HSPs)
chr7 (7-440)||(3339884-3340315)
chr7 (46-86)||(3346462-3346502)
[»] chr6 (15 HSPs)
chr6 (4-281)||(2952835-2953110)
chr6 (4-281)||(2935486-2935763)
chr6 (98-281)||(2928076-2928258)
chr6 (4-139)||(2974884-2975019)
chr6 (7-255)||(2986615-2986866)
chr6 (7-177)||(3002790-3002957)
chr6 (7-124)||(2954970-2955087)
chr6 (143-215)||(2955209-2955281)
chr6 (377-446)||(2985918-2985987)
chr6 (4-57)||(2965401-2965454)
chr6 (145-249)||(5584077-5584180)
chr6 (331-388)||(2935812-2935865)
chr6 (208-255)||(2955323-2955370)
chr6 (312-375)||(2986922-2986985)
chr6 (331-372)||(2928302-2928343)
[»] chr1 (1 HSPs)
chr1 (116-184)||(40352449-40352516)


Alignment Details
Target: scaffold0024 (Bit Score: 347; Significance: 0; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 4 - 446
Target Start/End: Complemental strand, 34240 - 33801
Alignment:
Q  4 attggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaac 103  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||    
T  34240 attggtctgatagtgttgttggcaaaatctacgggtgcaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccag--tgataaaaaac 34143  T
Q  104 tgttcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatttt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||    
T  34142 tgttcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatatttggatagcttgattgaaaagtgatttt 34043  T
Q  204 tcataattcaagctatttggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgatt-nnnnnnngaagaggaacatta 302  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||    
T  34042 tcataattcaagttatttggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgattaaaaaaaagaagaggaacatta 33943  T
Q  303 atnnnnnnngagagtgcaaaacttcaggaaatggtaaattgattacgaagtcacatcaataaaatgttgaaggctgaagcgtttttctttggacacaaaa 402  Q
    ||        ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33942 ataaaaaa--agagtgcaaaacttcaggaaatggtgaattgattacgaagttacatcaataaaatgttgaaggctgaagcgtttttctttggacacaaaa 33845  T
Q  403 tctacccatattagctccaaccttaaatcgattttggaacaaca 446  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33844 tctacccatattagctccaaccttaaatcgattttggaacaaca 33801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 22 - 446
Target Start/End: Complemental strand, 43526 - 43103
Alignment:
Q  22 ttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaactgttcttgaattaattga 121  Q
    |||||||||| || |||| || |||||||||| ||| |||||||||||||| ||||||| |||||||||  |||||||||||| || |||||||||||||    
T  43526 ttggcaaaatataggggtgcatgtagaaactcttaactaatgtcgtgtctcgcatgtgtatggttccacggtgataaaaaactattgttgaattaattga 43427  T
Q  122 ttttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatttttcataattcaagctattt 221  Q
    ||||||| |||||||||||| |||||| |||||||||| ||| |||||||||||||| |||||||||||||||| ||||||||||||||||||| | |||    
T  43426 ttttatataattgatttaggtgaaaaaatgactttaatataatatgatttatgtttgaatatcttgattgaaaaatgatttttcataattcaagttgttt 43327  T
Q  222 ggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgattnnnnnnngaagaggaacattaatnnnnnnngagagtgcaa 321  Q
    ||||||||| |||| |||| |||||| ||||||| |||| || |||  ||||||||||||       |||||||||||| |||       |||| |||||    
T  43326 ggataattttgatcgaaatgacttttaagtgtgaatttatcaaaactagtttgaatgatt-gaaaaagaagaggaacatcaataaaataagagactgcaa 43228  T
Q  322 aacttcaggaaatggtaaattgattacgaagtcacatcaataaaatgttgaaggctgaagcgtttttctttggacacaaaatctacccatattagctcca 421  Q
     |||| || ||||||| ||||||| |  | |||||||||||||||||||||||||||||||| |||||||||||| || || ||||||||||||||||||    
T  43227 cacttgagtaaatggtgaattgatcaacaggtcacatcaataaaatgttgaaggctgaagcgcttttctttggacgcataagctacccatattagctcca 43128  T
Q  422 accttaaatcgattttggaacaaca 446  Q
    ||||||||| |||||||||||||||    
T  43127 accttaaattgattttggaacaaca 43103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 176; Significance: 1e-94; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 7 - 440
Target Start/End: Original strand, 3339884 - 3340315
Alignment:
Q  7 ggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaactgt 106  Q
    ||||||||| | | |||||||||||||| |||| || |||||||||||||| ||||||||||| |  || ||||||||||||||  ||| ||| |||| |    
T  3339884 ggtctgataatatggttggcaaaatctaggggtgcatgtagaaactcctaactaatgtcgtgtattgcacgtgtttggttccactgtgaaaaataactct 3339983  T
Q  107 tcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatttttca 206  Q
    | |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||||||| |||||||||||||| | ||||||    
T  3339984 ttttgaattaattggttttatagaattgatttaggtgaaaaagtgactttgatgtaacatgattta-ggttggataccttgattgaaaagtaaattttca 3340082  T
Q  207 taattcaagctatttggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgattnnnnnnngaagaggaacattaatnn 306  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||| |||| || ||| ||||| |||||||       ||| |||||| | |||      
T  3340083 taattcaagttgtttggataatttagattaaaattacttttgagtgtgaatttatcaaaactggttttaatgattaaaaaaagaaaaggaacgtcaataa 3340182  T
Q  307 nnnnngagagtgcaaaacttcaggaaatggtaaattgattacgaagtcacatcaataaaatgttgaaggctgaagcgtttttctttggacacaaaatcta 406  Q
         |||||||||| |||| |  ||||| |||||||||||| | ||| |||||||||| |||| |||||||||| | ||||| |||||| ||||| |||    
T  3340183 aataagagagtgcaacacttgactaaatgataaattgattaccaggtcgcatcaataaattgtttaaggctgaagtgcttttccttggacgcaaaagcta 3340282  T
Q  407 cccatattagctccaaccttaaatcgattttgga 440  Q
     |||||||||||||||||||||||||||||||||    
T  3340283 -ccatattagctccaaccttaaatcgattttgga 3340315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 46 - 86
Target Start/End: Original strand, 3346462 - 3346502
Alignment:
Q  46 agaaactcctaagtaatgtcgtgtctcacatgtgtttggtt 86  Q
    |||||||||||| |||||||| ||||| |||||||||||||    
T  3346462 agaaactcctaactaatgtcgcgtctcgcatgtgtttggtt 3346502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 7e-87; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 4 - 281
Target Start/End: Original strand, 2952835 - 2953110
Alignment:
Q  4 attggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaac 103  Q
    ||||||||||||||||||||||||||||||| |||| || ||||||| |||||| |||||||| ||||||||||||||| ||||||   |||||||| ||    
T  2952835 attggtctgatagtgttgttggcaaaatctaggggtgcaggtagaaattcctaactaatgtcgcgtctcacatgtgtttcgttccatggtgataaaatac 2952934  T
Q  104 tgttcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatttt 203  Q
    |||| ||||||||||||||||||||||| |||||| || ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  2952935 tgtttttgaattaattgattttatagaaatgattttggtgaaa--gtgactttaatgtatcatgatttatgtttggatatcttgattgaaaagtgatttt 2953032  T
Q  204 tcataattcaagctatttggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgatt 281  Q
    |||||||||||| | |||||| |||||||||||||||||||||| || |||| |||| || |||  ||||||||||||    
T  2953033 tcataattcaagttgtttggagaatttagatcaaaattacttttaagagtgaatttatcaaaactagtttgaatgatt 2953110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 4 - 281
Target Start/End: Original strand, 2935486 - 2935763
Alignment:
Q  4 attggtctgatagt---gttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaa 100  Q
    ||||||||||||||   ||||||||||||||||| |||| || |||||||||| ||| ||||||| |||||| ||| |||||||||||||| ||||||||    
T  2935486 attggtctgatagtactgttgttggcaaaatctaggggtgcaggtagaaactcataactaatgtcatgtctcgcatctgtttggttccacattgataaaa 2935585  T
Q  101 --aactgttcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtg 198  Q
      ||||||| |||||||||||||||||||||||| |||||| | |||||||||||||| | |||||||| |||||||     || |||||||||||||||    
T  2935586 aaaactgtttttgaattaattgattttatagaatagatttaagtgaaaaagtgactttgaggtaacatggtttatgt-----taccttgattgaaaagtg 2935680  T
Q  199 atttttcataattcaagctatttggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgatt 281  Q
    ||||||||||||||| | | |||||||||||||||||||||||  |||||| ||||| |||| || |||  ||||||||||||    
T  2935681 atttttcataattcatgttgtttggataatttagatcaaaattgtttttgaatgtgaatttatcaaaacgcgtttgaatgatt 2935763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 98 - 281
Target Start/End: Original strand, 2928076 - 2928258
Alignment:
Q  98 aaaaactgttcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagt 197  Q
    ||||| |||| |||||  |||||||||| ||||||||||||||| ||||| |||| |||||  |||  ||| |||||||| |||| ||||||||||||||    
T  2928076 aaaaattgtttttgaaagaattgattttgtagaattgatttaggtgaaaa-gtgagtttaagttaaggtgacttatgttttgataccttgattgaaaagt 2928174  T
Q  198 gatttttcataattcaagctatttggataatttagatcaaaattacttttgagtgtgactttaccataacaggtttgaatgatt 281  Q
    |||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  2928175 gatttttcataattcaagttgtttagataatttagatcaaaattacttttgagtgtgaatttaccaaaactggtttgaatgatt 2928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 4 - 139
Target Start/End: Original strand, 2974884 - 2975019
Alignment:
Q  4 attggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaac 103  Q
    ||||| |||||||||||||||| |||||||| |||| || |||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||||| |    
T  2974884 attggcctgatagtgttgttggaaaaatctaggggtgcaggtagaaactcctaactaatgtcatgtcttacatgtgtttggttccacaaagataaaaatc 2974983  T
Q  104 tgttcttgaattaattgattttatagaattgattta 139  Q
    |||| ||||||||||||||| ||| |||||||||||    
T  2974984 tgtttttgaattaattgattatattgaattgattta 2975019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 7 - 255
Target Start/End: Original strand, 2986615 - 2986866
Alignment:
Q  7 ggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgt-----ctcacatgtgtttggttccacaatgataaaaa 101  Q
    ||||||||||||| |||||||||||||| |||| ||| ||||||||||||| |||||| | ||     ||||  ||||||||||| |||  | | ||| |    
T  2986615 ggtctgatagtgtggttggcaaaatctaggggtgcaactagaaactcctaactaatgttgcgttgcacctcatgtgtgtttggtttcacggtaa-aaaca 2986713  T
Q  102 actgttcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatt 201  Q
    | |||| |  ||| |||||||||| ||  ||||||||||| ||||| |||| |||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  2986714 attgttttataatgaattgattttgtatgattgatttaggtgaaaa-gtgagtttaatgtaacatgatttatgttttgataccttaattgaaaagtgatt 2986812  T
Q  202 tttcataattcaagctatttggataatttagatcaaaattacttttgagtgtga 255  Q
    | |||| ||||||| | ||||||||||||| |||||||||| |||||| |||||    
T  2986813 tatcattattcaagttgtttggataatttaaatcaaaattatttttgaatgtga 2986866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 7 - 177
Target Start/End: Complemental strand, 3002957 - 3002790
Alignment:
Q  7 ggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaactgt 106  Q
    ||||||||||||| |||||||||||||| |||| || ||||||||| | || |||||||||||||| | || ||||||||||||  |||| || || |||    
T  3002957 ggtctgatagtgtggttggcaaaatctaggggtgcaggtagaaacttcaaactaatgtcgtgtctcgcgtgcgtttggttccacggtgat-aacaattgt 3002859  T
Q  107 tcttgaattaattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgttt 177  Q
    | |||||| |||||||||| ||||||||||||||  |||||  ||| |||| |||||||||||||||||||    
T  3002858 ttttgaatgaattgattttctagaattgatttagatgaaaa--tgagtttagtgtaacatgatttatgttt 3002790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 7 - 124
Target Start/End: Original strand, 2954970 - 2955087
Alignment:
Q  7 ggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaagtaatgtcgtgtctcacatgtgtttggttccacaatgataaaaaactgt 106  Q
    ||||||||||||| |||||||||||||| || | || |||||||||||||| ||||||||| |||  ||||||||||||||||   ||||||||||||||    
T  2954970 ggtctgatagtgtggttggcaaaatctagggttgcaggtagaaactcctaactaatgtcgtatcttgcatgtgtttggttccagggtgataaaaaactgt 2955069  T
Q  107 tcttgaattaattgattt 124  Q
    | ||||||||||||||||    
T  2955070 ttttgaattaattgattt 2955087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 143 - 215
Target Start/End: Original strand, 2955209 - 2955281
Alignment:
Q  143 gaaaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatttttcataattcaag 215  Q
    |||||||||||||||||||||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||    
T  2955209 gaaaaagtgactttaatgtaacataatttatgttaggataccttaattgaaaagtgatttttcataattcaag 2955281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 377 - 446
Target Start/End: Original strand, 2985918 - 2985987
Alignment:
Q  377 tgaagcgtttttctttggacacaaaatctacccatattagctccaaccttaaatcgattttggaacaaca 446  Q
    ||||||| |||||||||||| ||||| ||||||||||| |||||||||||||||| | ||||||||||||    
T  2985918 tgaagcgattttctttggacgcaaaagctacccatatttgctccaaccttaaatccagtttggaacaaca 2985987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 2965401 - 2965454
Alignment:
Q  4 attggtctgatagtgttgttggcaaaatctacgggtacaagtagaaactcctaa 57  Q
    ||||||||||||||||||||||||||||||| || | || ||||||||||||||    
T  2965401 attggtctgatagtgttgttggcaaaatctagggtttcaggtagaaactcctaa 2965454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 5584077 - 5584180
Alignment:
Q  145 aaaagtgactttaatgtaacatgatttatgtttggatatcttgattgaaaagtgatttttcataattcaagctatttggataatttagatcaaaattact 244  Q
    |||||||| ||||||||||  |||||||||||||||||| || ||  | |||||||||||   |||||||| | ||||||||||||| ||||||||  ||    
T  5584077 aaaagtgagtttaatgtaat-tgatttatgtttggatatatttatatagaagtgatttttaccaattcaagttgtttggataatttaaatcaaaatagct 5584175  T
Q  245 tttga 249  Q
    |||||    
T  5584176 tttga 5584180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 388
Target Start/End: Original strand, 2935812 - 2935865
Alignment:
Q  331 aaatggtaaattgattacgaagtcacatcaataaaatgttgaaggctgaagcgttttt 388  Q
    |||||||||||||||||| | |||||||    ||||||||||||||||||||||||||    
T  2935812 aaatggtaaattgattactaggtcacat----aaaatgttgaaggctgaagcgttttt 2935865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 255
Target Start/End: Original strand, 2955323 - 2955370
Alignment:
Q  208 aattcaagctatttggataatttagatcaaaattacttttgagtgtga 255  Q
    |||||||| | ||||||||||||||||||||||||||| ||| |||||    
T  2955323 aattcaagttgtttggataatttagatcaaaattacttctgaatgtga 2955370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 312 - 375
Target Start/End: Original strand, 2986922 - 2986985
Alignment:
Q  312 gagagtgcaaaacttcaggaaatggtaaattgattacgaagtcacatcaataaaatgttgaagg 375  Q
    |||||||||| |||| || |||||||||||| |||||    |||||||||||||||||||||||    
T  2986922 gagagtgcaacacttgagtaaatggtaaatttattactggatcacatcaataaaatgttgaagg 2986985  T

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Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 331 - 372
Target Start/End: Original strand, 2928302 - 2928343
Alignment:
Q  331 aaatggtaaattgattacgaagtcacatcaataaaatgttga 372  Q
    |||||||||||||||||| || | ||||||||||||||||||    
T  2928302 aaatggtaaattgattaccaaatgacatcaataaaatgttga 2928343  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 40352516 - 40352449
Alignment:
Q  116 aattgattttatagaattgatttaggcgaaaaagtgactttaatgtaacatgatttatgtttggatatc 184  Q
    |||||||||| | |||||||||| ||  |||| |||| ||||||||||  |||||||||||||||||||    
T  40352516 aattgattttgtggaattgattttggttaaaa-gtgagtttaatgtaaagtgatttatgtttggatatc 40352449  T

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