View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF3601_high_7 (Length: 423)

Name: NF3601_high_7
Description: NF3601
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF3601_high_7
NF3601_high_7
[»] chr5 (29 HSPs)
chr5 (40-171)||(1162113-1162243)
chr5 (55-138)||(879303-879386)
chr5 (173-218)||(22602633-22602678)
chr5 (174-218)||(7863528-7863572)
chr5 (174-218)||(36366124-36366168)
chr5 (173-216)||(34719458-34719501)
chr5 (179-218)||(42819334-42819373)
chr5 (179-216)||(3086437-3086474)
chr5 (179-216)||(14387900-14387937)
chr5 (179-216)||(25695543-25695580)
chr5 (174-218)||(9702707-9702751)
chr5 (174-218)||(9809820-9809864)
chr5 (174-218)||(32977101-32977145)
chr5 (179-218)||(12702065-12702104)
chr5 (173-216)||(17997460-17997503)
chr5 (179-218)||(19365943-19365982)
chr5 (174-216)||(752055-752097)
chr5 (174-216)||(4883071-4883113)
chr5 (174-212)||(5620643-5620681)
chr5 (174-216)||(13596919-13596961)
chr5 (174-216)||(20350825-20350867)
chr5 (174-216)||(34373668-34373710)
chr5 (174-216)||(36884780-36884822)
chr5 (174-216)||(43136273-43136315)
chr5 (179-216)||(19395654-19395691)
chr5 (179-216)||(41693142-41693179)
chr5 (174-218)||(2366839-2366883)
chr5 (174-218)||(8350248-8350292)
chr5 (190-218)||(12763092-12763120)
[»] chr4 (38 HSPs)
chr4 (305-349)||(25898162-25898206)
chr4 (179-216)||(8532224-8532261)
chr4 (173-218)||(15650484-15650529)
chr4 (179-218)||(43014595-43014634)
chr4 (174-216)||(2118191-2118233)
chr4 (174-216)||(5759342-5759384)
chr4 (174-216)||(35707657-35707699)
chr4 (174-216)||(36858002-36858044)
chr4 (179-221)||(56541761-56541803)
chr4 (179-216)||(574181-574218)
chr4 (179-216)||(3759280-3759317)
chr4 (171-216)||(8964834-8964879)
chr4 (179-216)||(12680634-12680671)
chr4 (179-216)||(39713500-39713537)
chr4 (174-218)||(19591079-19591123)
chr4 (378-410)||(25898237-25898269)
chr4 (179-218)||(3839099-3839138)
chr4 (179-218)||(16895948-16895987)
chr4 (173-216)||(21353964-21354007)
chr4 (173-216)||(30527586-30527629)
chr4 (174-216)||(2777222-2777264)
chr4 (174-216)||(5271601-5271643)
chr4 (174-216)||(9887270-9887312)
chr4 (174-216)||(16653195-16653237)
chr4 (174-216)||(19109061-19109103)
chr4 (174-216)||(25898035-25898077)
chr4 (174-216)||(29713824-29713866)
chr4 (174-212)||(39404591-39404629)
chr4 (174-216)||(41983531-41983573)
chr4 (179-216)||(5483034-5483071)
chr4 (179-216)||(14828807-14828844)
chr4 (175-212)||(33502305-33502342)
chr4 (174-214)||(15521071-15521111)
chr4 (173-217)||(23992318-23992362)
chr4 (188-216)||(24549423-24549451)
chr4 (174-218)||(26870028-26870072)
chr4 (174-218)||(29706149-29706193)
chr4 (188-216)||(46106426-46106454)
[»] chr8 (24 HSPs)
chr8 (163-218)||(27272684-27272739)
chr8 (173-218)||(2961007-2961052)
chr8 (174-216)||(18375557-18375599)
chr8 (174-216)||(36778480-36778522)
chr8 (174-216)||(41158644-41158686)
chr8 (179-216)||(40586447-40586484)
chr8 (174-214)||(7391324-7391364)
chr8 (174-218)||(12249911-12249955)
chr8 (174-218)||(23626055-23626099)
chr8 (174-218)||(39445252-39445296)
chr8 (179-218)||(11697108-11697147)
chr8 (174-216)||(2680235-2680277)
chr8 (174-216)||(8160419-8160461)
chr8 (174-216)||(8763013-8763055)
chr8 (174-216)||(24055841-24055883)
chr8 (174-216)||(27273878-27273920)
chr8 (174-216)||(32569576-32569618)
chr8 (179-216)||(1945188-1945225)
chr8 (174-211)||(41908015-41908052)
chr8 (174-214)||(6300488-6300528)
chr8 (174-218)||(12660957-12661001)
chr8 (179-215)||(28940718-28940754)
chr8 (174-214)||(37029917-37029957)
chr8 (174-214)||(42060661-42060701)
[»] chr6 (19 HSPs)
chr6 (174-216)||(35160123-35160165)
chr6 (174-218)||(18389167-18389211)
chr6 (174-218)||(33319047-33319091)
chr6 (179-218)||(22975722-22975761)
chr6 (179-218)||(23812640-23812679)
chr6 (174-216)||(6966236-6966278)
chr6 (174-216)||(24447795-24447837)
chr6 (179-216)||(4110061-4110098)
chr6 (173-218)||(11272760-11272805)
chr6 (174-218)||(1932338-1932382)
chr6 (174-218)||(2624721-2624765)
chr6 (173-216)||(2522024-2522067)
chr6 (174-216)||(5753126-5753168)
chr6 (188-218)||(8615081-8615111)
chr6 (174-216)||(15043827-15043869)
chr6 (174-212)||(33319565-33319603)
chr6 (174-215)||(11681669-11681710)
chr6 (174-218)||(4425906-4425950)
chr6 (174-214)||(13456734-13456774)
[»] chr7 (22 HSPs)
chr7 (173-218)||(12960605-12960650)
chr7 (174-216)||(691289-691331)
chr7 (174-216)||(21669231-21669273)
chr7 (174-216)||(31896813-31896855)
chr7 (174-216)||(39278238-39278280)
chr7 (174-216)||(39647981-39648023)
chr7 (179-216)||(9151419-9151456)
chr7 (174-218)||(2067848-2067892)
chr7 (174-218)||(9226020-9226064)
chr7 (174-214)||(17817721-17817761)
chr7 (174-218)||(27840512-27840556)
chr7 (174-218)||(38434277-38434321)
chr7 (174-209)||(272590-272625)
chr7 (174-212)||(1484811-1484849)
chr7 (174-216)||(24682277-24682319)
chr7 (174-216)||(27732952-27732994)
chr7 (179-216)||(17172894-17172931)
chr7 (179-216)||(44806578-44806615)
chr7 (179-211)||(15595430-15595462)
chr7 (174-214)||(19049240-19049280)
chr7 (174-218)||(42996939-42996983)
chr7 (174-214)||(47573332-47573372)
[»] scaffold0249 (1 HSPs)
scaffold0249 (174-218)||(24918-24962)
[»] scaffold0103 (1 HSPs)
scaffold0103 (174-218)||(13021-13065)
[»] scaffold0057 (1 HSPs)
scaffold0057 (168-216)||(17394-17442)
[»] chr2 (17 HSPs)
chr2 (174-218)||(7364778-7364822)
chr2 (173-216)||(4289026-4289069)
chr2 (174-216)||(5253295-5253337)
chr2 (174-212)||(9542629-9542667)
chr2 (174-216)||(26828460-26828502)
chr2 (174-216)||(28609953-28609995)
chr2 (174-216)||(33908192-33908234)
chr2 (174-216)||(42782674-42782716)
chr2 (179-216)||(9916711-9916748)
chr2 (179-216)||(11707574-11707611)
chr2 (175-216)||(16884248-16884289)
chr2 (175-216)||(17041938-17041979)
chr2 (179-216)||(19488276-19488313)
chr2 (179-216)||(45003666-45003703)
chr2 (174-214)||(6342728-6342768)
chr2 (179-215)||(10820977-10821013)
chr2 (174-218)||(30922097-30922141)
[»] chr1 (25 HSPs)
chr1 (174-218)||(3929747-3929791)
chr1 (174-218)||(28565429-28565473)
chr1 (173-216)||(29840688-29840731)
chr1 (173-216)||(38896815-38896858)
chr1 (174-216)||(4893968-4894010)
chr1 (174-216)||(10763588-10763630)
chr1 (174-216)||(42682592-42682634)
chr1 (174-215)||(47137860-47137901)
chr1 (174-218)||(20767554-20767598)
chr1 (172-216)||(28573160-28573204)
chr1 (174-218)||(28631809-28631853)
chr1 (179-218)||(13662123-13662162)
chr1 (173-216)||(33074230-33074273)
chr1 (174-216)||(1375982-1376024)
chr1 (174-216)||(19320420-19320462)
chr1 (174-216)||(22194467-22194509)
chr1 (174-216)||(24289200-24289242)
chr1 (174-216)||(29184477-29184519)
chr1 (174-216)||(29693388-29693430)
chr1 (174-216)||(44407294-44407336)
chr1 (179-216)||(24294869-24294906)
chr1 (179-216)||(31620599-31620636)
chr1 (179-216)||(33363572-33363609)
chr1 (168-216)||(46623370-46623418)
chr1 (174-214)||(50394966-50395006)
[»] chr3 (22 HSPs)
chr3 (179-218)||(188734-188773)
chr3 (173-216)||(52462213-52462256)
chr3 (174-216)||(4137399-4137441)
chr3 (174-216)||(8396766-8396808)
chr3 (178-216)||(17228587-17228625)
chr3 (174-216)||(18688674-18688716)
chr3 (174-216)||(22477906-22477948)
chr3 (174-216)||(35861002-35861044)
chr3 (174-214)||(5240990-5241030)
chr3 (181-216)||(12001433-12001468)
chr3 (179-218)||(16496375-16496414)
chr3 (179-218)||(30766504-30766543)
chr3 (174-216)||(11950990-11951032)
chr3 (174-216)||(19353795-19353837)
chr3 (174-212)||(21165930-21165968)
chr3 (174-216)||(26100777-26100819)
chr3 (174-212)||(26776433-26776471)
chr3 (174-216)||(50742296-50742338)
chr3 (174-218)||(15315272-15315317)
chr3 (179-212)||(22522275-22522308)
chr3 (179-216)||(39576534-39576571)
chr3 (174-218)||(26035813-26035857)
[»] scaffold0069 (1 HSPs)
scaffold0069 (174-216)||(14648-14690)
[»] scaffold0088 (1 HSPs)
scaffold0088 (174-218)||(52692-52736)
[»] scaffold0051 (2 HSPs)
scaffold0051 (179-218)||(61711-61750)
scaffold0051 (174-216)||(55560-55602)
[»] scaffold0027 (1 HSPs)
scaffold0027 (173-216)||(143212-143255)
[»] scaffold0006 (1 HSPs)
scaffold0006 (179-218)||(151885-151924)
[»] scaffold0484 (1 HSPs)
scaffold0484 (174-212)||(8175-8213)
[»] scaffold0381 (1 HSPs)
scaffold0381 (174-216)||(11232-11274)
[»] scaffold0171 (1 HSPs)
scaffold0171 (174-216)||(29638-29680)
[»] scaffold0047 (1 HSPs)
scaffold0047 (179-216)||(25618-25655)
[»] scaffold0005 (1 HSPs)
scaffold0005 (179-216)||(10865-10902)
[»] scaffold0175 (1 HSPs)
scaffold0175 (174-214)||(26963-27003)


Alignment Details
Target: chr5 (Bit Score: 108; Significance: 4e-54; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 1162243 - 1162113
Alignment:
Q  40 acgatagtgactaaaatgactaacagagtgtggagaggaggattaaacattgttttcgtttgagttgggaactagtgtggcaacatcttacacttttaaa 139  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  1162243 acgatagtgactaaaatgactaacagagtgtagagaggaggattaaacgttgttttcgtttga-ttggggactagtgtggcaacatcttacacttttaaa 1162145  T
Q  140 atgactaaaatggtggtttgctcttttattaa 171  Q
    ||||||||||||||| ||||||||||||||||    
T  1162144 atgactaaaatggtgctttgctcttttattaa 1162113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 138
Target Start/End: Original strand, 879303 - 879386
Alignment:
Q  55 atgactaacagagtgtggagaggaggattaaacattgttttcgtttgagttgggaactagtgtggcaacatcttacacttttaa 138  Q
    ||||||||||||| |  || |||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  879303 atgactaacagagggcagaaaggaggattaaacagtgttttcgtttgagtcggggactagtgtggcaacatcttaaacttttaa 879386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 22602633 - 22602678
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||    
T  22602633 caactagttacaaacccgtgcttcgcacgggttgaataacgtatct 22602678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 7863528 - 7863572
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  7863528 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 7863572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 36366124 - 36366168
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  36366124 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 36366168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 34719501 - 34719458
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  34719501 caactagttacaaacccgtgcttcgcacgggttgaataacgtat 34719458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 42819334 - 42819373
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  42819334 gttacaaacccgtgcttcgcacgggttgaataacgtatct 42819373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 3086437 - 3086474
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3086437 gttacaaacccgtgcttcgcacgggttgaataacgtat 3086474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 14387900 - 14387937
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  14387900 gttacaaacccgtgcttcgcacgggttgaataacgtat 14387937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 25695543 - 25695580
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  25695543 gttacaaacccgtgcttcgcacgggttgaataacgtat 25695580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 9702751 - 9702707
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  9702751 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 9702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 9809820 - 9809864
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||| ||||||    
T  9809820 aactagttacaaacccgtgcttcgcacgggttgaataatgtatct 9809864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 32977101 - 32977145
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| | |||||||||||||||||||||||||||||    
T  32977101 aactagttacaaaccggtgcttcgcacgggttgaataacgtatct 32977145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 12702065 - 12702104
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||||||||||||||||||| ||||||    
T  12702065 gttacaaacccgtgcttcgcacgggttgaataatgtatct 12702104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 17997503 - 17997460
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  17997503 caactagttacaaacccgtgcttcgcacgggttcaataacgtat 17997460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 19365982 - 19365943
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  19365982 gttacaaacccgtgcttcgcatgggttgaataacgtatct 19365943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 752055 - 752097
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  752055 aactagttacaaacccgtgctttgcacgggttgaataacgtat 752097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 4883113 - 4883071
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  4883113 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 4883071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 5620643 - 5620681
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  5620643 aactagttacaaacccgtgcttcgcacgggttgaataac 5620681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 13596961 - 13596919
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||| ||||||    
T  13596961 aactagttacaaacccgtgcttcgcacgggttgaattacgtat 13596919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 20350867 - 20350825
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  20350867 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 20350825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 34373668 - 34373710
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  34373668 aactagttacaaacccgtgcttcgcacgggtttaataacgtat 34373710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 36884780 - 36884822
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| ||||||||| |||||||||||||||||||    
T  36884780 aactagttacaaacccgtgcttcacacgggttgaataacgtat 36884822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 43136273 - 43136315
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  43136273 aactagttacaaacccgtgctttgcacgggttgaataacgtat 43136315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 19395691 - 19395654
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  19395691 gttacaaacccgtgcttcgcacgggttcaataacgtat 19395654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 41693179 - 41693142
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  41693179 gttacaaactcgtgcttcgcacgggttgaataacgtat 41693142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 2366839 - 2366883
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| | ||| |||||||||||||||||||||||||    
T  2366839 aactagttacaaacctgtgtttcgcacgggttgaataacgtatct 2366883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 8350292 - 8350248
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||| ||| |||||||||| ||||||||||||||||||||    
T  8350292 aactagttataaacccgtgcttcgtacgggttgaataacgtatct 8350248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 190 - 218
Target Start/End: Original strand, 12763092 - 12763120
Alignment:
Q  190 gtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||||||||||||||||||||||||    
T  12763092 gtgcttcgcacgggttgaataacgtatct 12763120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 349
Target Start/End: Original strand, 25898162 - 25898206
Alignment:
Q  305 taatgattattgaattattgagctattcttctgaaggccagaatt 349  Q
    ||||||||||||||||||||||||||||||||||||||| |||||    
T  25898162 taatgattattgaattattgagctattcttctgaaggccggaatt 25898206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 8532261 - 8532224
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8532261 gttacaaatccgtgcttcgcacgggttgaataacgtat 8532224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 15650484 - 15650529
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||    
T  15650484 caactagttacaaacccgtgcttcgcacgggttgaataacgtatct 15650529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 43014595 - 43014634
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  43014595 gttacaaacccgtgcttcgcacgggttgaataacgtatct 43014634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 2118233 - 2118191
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  2118233 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 2118191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 5759384 - 5759342
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  5759384 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 5759342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 35707657 - 35707699
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  35707657 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 35707699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 36858044 - 36858002
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  36858044 aactagttacaaatccgtgcttcgcacgggttcaataacgtat 36858002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 56541803 - 56541761
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatctcgt 221  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  56541803 gttacaaacctgtgcttcgcacgggttgaataacgtatctcgt 56541761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 574181 - 574218
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  574181 gttacaaacccgtgcttcgcacgggttgaataacgtat 574218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 3759317 - 3759280
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3759317 gttacaaacccgtgcttcgcacgggttgaataacgtat 3759280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 171 - 216
Target Start/End: Complemental strand, 8964879 - 8964834
Alignment:
Q  171 agcaactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||||    
T  8964879 agcaactagttacaaacccgtgctttgcacgggttgaataacgtat 8964834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 12680634 - 12680671
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  12680634 gttacaaacccgtgcttcgcacgggttgaataacgtat 12680671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 39713500 - 39713537
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  39713500 gttacaaacccgtgcttcgcacgggttgaataacgtat 39713537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 19591123 - 19591079
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||    
T  19591123 aactagttacaaacccgtgcttcgcacgggtttaataacgtatct 19591079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 378 - 410
Target Start/End: Original strand, 25898237 - 25898269
Alignment:
Q  378 aaatattgtcttaacacaatatttttgaggttc 410  Q
    |||||||||||||||||||||||||||||||||    
T  25898237 aaatattgtcttaacacaatatttttgaggttc 25898269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 3839099 - 3839138
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||||||| ||||||||||||||||||    
T  3839099 gttacaaacccgtgcttcgcaagggttgaataacgtatct 3839138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 16895987 - 16895948
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| || ||||||||||||||||||||||||||||    
T  16895987 gttacaaacccatgcttcgcacgggttgaataacgtatct 16895948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 21354007 - 21353964
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  21354007 caactagttacaaacccgtgcttcgcacgggttcaataacgtat 21353964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 30527586 - 30527629
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||| ||||||||||||||||||    
T  30527586 caactagttacaaacccgtgcttcgtacgggttgaataacgtat 30527629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 2777264 - 2777222
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  2777264 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 2777222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 5271601 - 5271643
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  5271601 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 5271643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 9887270 - 9887312
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  9887270 aactagttacaaacccgtgctttgcacgggttgaataacgtat 9887312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 16653237 - 16653195
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  16653237 aactagttacaaacccgtgctttgcacgggttgaataacgtat 16653195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 19109061 - 19109103
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||||||||| |||||||||||| ||||||||||    
T  19109061 aactagttacaaatccgtgtttcgcacgggttcaataacgtat 19109103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 25898035 - 25898077
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||    
T  25898035 aactagttacaaatccgtacttcgcacgggttgaataaggtat 25898077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 29713866 - 29713824
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  29713866 aactagttacaaacccgtgctttgcacgggttgaataacgtat 29713824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 39404591 - 39404629
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  39404591 aactagttacaaacccgtgcttcgcacgggttgaataac 39404629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 41983531 - 41983573
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  41983531 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 41983573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 5483071 - 5483034
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  5483071 gttacaaacccgtgcttcgcacgggttgaattacgtat 5483034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 14828807 - 14828844
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  14828807 gttacaaacccgtgcttcgcacgggttcaataacgtat 14828844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 33502305 - 33502342
Alignment:
Q  175 actggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  33502305 actggttacaaacccgtgcttcgcacgggttcaataac 33502342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 15521111 - 15521071
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  15521111 aactagttacaaacccgtgcttcgcacgggttcaataacgt 15521071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 173 - 217
Target Start/End: Original strand, 23992318 - 23992362
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtatc 217  Q
    ||||| |||||||| | ||| ||||||||||||||||||||||||    
T  23992318 caactagttacaaacctgtgtttcgcacgggttgaataacgtatc 23992362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 24549451 - 24549423
Alignment:
Q  188 ccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||||||||||||||||||||||||    
T  24549451 ccgtgcttcgcacgggttgaataacgtat 24549423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 26870028 - 26870072
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||| |||||||||||||||| |||||    
T  26870028 aactagttacaaacccgtgctttgcacgggttgaataacatatct 26870072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 29706149 - 29706193
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||| ||| ||||||||||||||| |||||||||||||||    
T  29706149 aactagttataaacccgtgcttcgcacggattgaataacgtatct 29706193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 46106454 - 46106426
Alignment:
Q  188 ccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||||||||||||||||||||||||    
T  46106454 ccgtgcttcgcacgggttgaataacgtat 46106426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 218
Target Start/End: Complemental strand, 27272739 - 27272684
Alignment:
Q  163 ttttattaagcaactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  27272739 tttttttaatcaactagttacaaacccgtgcttcgcacgggttgaataacgtatct 27272684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Original strand, 2961007 - 2961052
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||    
T  2961007 caactagttacaaacccgtgcttcgcacgggttgaataacgtatct 2961052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 18375557 - 18375599
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  18375557 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 18375599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 36778522 - 36778480
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  36778522 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 36778480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 41158686 - 41158644
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  41158686 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 41158644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 40586447 - 40586484
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  40586447 gttacaaacccgtgcttcgcacgggttgaataacgtat 40586484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 7391364 - 7391324
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  7391364 aactagttacaaacccgtgcttcgcacgggttgaataacgt 7391324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 12249911 - 12249955
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  12249911 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 12249955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 23626055 - 23626099
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  23626055 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 23626099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 39445296 - 39445252
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  39445296 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 39445252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 11697147 - 11697108
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  11697147 gttacaaacccgtgctttgcacgggttgaataacgtatct 11697108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 2680235 - 2680277
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||| ||||||    
T  2680235 aactagttacaaacccgtgcttcgcacgggttgaattacgtat 2680277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 8160419 - 8160461
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  8160419 aactagttacaaacccgtgctttgcacgggttgaataacgtat 8160461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 8763055 - 8763013
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  8763055 aactagttacaaacccgtgctttgcacgggttgaataacgtat 8763013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 24055883 - 24055841
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| ||||||||||||| |||||||||||||||    
T  24055883 aactagttacaaacccgtgcttcgcacaggttgaataacgtat 24055841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 27273920 - 27273878
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  27273920 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 27273878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 32569576 - 32569618
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||| ||||||    
T  32569576 aactagttacaaacccgtgcttcgcacgggttgaattacgtat 32569618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 1945225 - 1945188
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  1945225 gttacaaacccgtgctttgcacgggttgaataacgtat 1945188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 41908052 - 41908015
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataa 211  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  41908052 aactagttacaaacccgtgcttcgcacgggttgaataa 41908015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 6300488 - 6300528
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  6300488 aactagttacaaacccgtgcttcgcacgggttcaataacgt 6300528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 12660957 - 12661001
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||| ||||| ||||||||||||    
T  12660957 aactagttacaaacccgtgcttcgcatgggttaaataacgtatct 12661001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 28940718 - 28940754
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgta 215  Q
    |||||||| |||||||||||||||||||||| |||||    
T  28940718 gttacaaacccgtgcttcgcacgggttgaattacgta 28940754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 37029957 - 37029917
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  37029957 aactagttacaaacccgtgcttcgcacgggttcaataacgt 37029917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 42060661 - 42060701
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  42060661 aactagttacaaacccgtgcttcgcacgggttcaataacgt 42060701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 35160165 - 35160123
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  35160165 aactagttacaaatccgtgcttcgcacgggttgaataacgtat 35160123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 18389167 - 18389211
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  18389167 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 18389211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 33319091 - 33319047
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  33319091 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 33319047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 22975722 - 22975761
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  22975722 gttacaaatctgtgcttcgcacgggttgaataacgtatct 22975761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 23812679 - 23812640
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  23812679 gttacaaatctgtgcttcgcacgggttgaataacgtatct 23812640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 6966236 - 6966278
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  6966236 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 6966278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 24447837 - 24447795
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  24447837 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 24447795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 4110098 - 4110061
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  4110098 gttacaaacccgtgcttcgcacgggttgaataacgtat 4110061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 11272805 - 11272760
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||||||    
T  11272805 caactagttacaaatccgtgcttcgcacgagttgaataatgtatct 11272760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 1932382 - 1932338
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||| |||||||    
T  1932382 aactagttacaaacccgtgcttcgcacgggttgaatatcgtatct 1932338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 2624721 - 2624765
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||| ||||||||||||||||||||||||    
T  2624721 aactagttacaaacccgtgcatcgcacgggttgaataacgtatct 2624765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 2522067 - 2522024
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||    
T  2522067 caactagttacaaacccgtgcttcgcacgggttcaataacgtat 2522024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 5753126 - 5753168
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||| ||||||||||||||||||||||||    
T  5753126 aactagttacaaacccgtacttcgcacgggttgaataacgtat 5753168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 188 - 218
Target Start/End: Complemental strand, 8615111 - 8615081
Alignment:
Q  188 ccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||||||||||||||||||||||||||    
T  8615111 ccgtgcttcgcacgggttgaataacgtatct 8615081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 15043827 - 15043869
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| ||||||||||||||| |||||||||||||    
T  15043827 aactagttacaaacccgtgcttcgcacggattgaataacgtat 15043869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 33319565 - 33319603
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| ||||||||||||||||||||||| ||||||||||    
T  33319565 aactagttacaaatccgtgcttcgcacgagttgaataac 33319603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 215
Target Start/End: Original strand, 11681669 - 11681710
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgta 215  Q
    |||| |||||||| |||||||||||||||||||||| |||||    
T  11681669 aactagttacaaacccgtgcttcgcacgggttgaattacgta 11681710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 4425950 - 4425906
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||| |||||||||||||| ||||||||||    
T  4425950 aactagttacaaacccgtgtttcgcacgggttgactaacgtatct 4425906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 13456734 - 13456774
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  13456734 aactagttacaaacccgtgcttcgcacgggttcaataacgt 13456774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 12960650 - 12960605
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    ||||| |||||||| |||||||||||||||||||||||||||||||    
T  12960650 caactagttacaaacccgtgcttcgcacgggttgaataacgtatct 12960605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 691331 - 691289
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  691331 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 691289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 21669231 - 21669273
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  21669231 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 21669273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 31896813 - 31896855
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  31896813 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 31896855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 39278280 - 39278238
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  39278280 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 39278238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 39647981 - 39648023
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  39647981 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 39648023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 9151456 - 9151419
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||||||||||    
T  9151456 gttacaaacccgtgcttcgcacgggttgaataacgtat 9151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 2067848 - 2067892
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||||||||||||||||||| |||||||| ||||||    
T  2067848 aactagttacaaatccgtgcttcgcacggattgaataatgtatct 2067892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 9226020 - 9226064
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  9226020 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 9226064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 17817761 - 17817721
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  17817761 aactagttacaaacccgtgcttcgcacgggttgaataacgt 17817721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 27840556 - 27840512
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||| ||||||||||||||||||||||    
T  27840556 aactagttacaaacccgtgctttgcacgggttgaataacgtatct 27840512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 38434277 - 38434321
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  38434277 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 38434321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 272590 - 272625
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaat 209  Q
    |||| |||||||||||||||||||||||||||||||    
T  272590 aactagttacaaatccgtgcttcgcacgggttgaat 272625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Complemental strand, 1484849 - 1484811
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    ||||||||||||| |||||||||||||||||| ||||||    
T  1484849 aactggttacaaacccgtgcttcgcacgggtttaataac 1484811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 24682277 - 24682319
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  24682277 aactagttacaaacccgtgctttgcacgggttgaataacgtat 24682319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 27732952 - 27732994
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| ||||||||||||| |||||||||||||||    
T  27732952 aactagttacaaacccgtgcttcgcactggttgaataacgtat 27732994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 17172931 - 17172894
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  17172931 gttacaaacccgtgcttcgcacggattgaataacgtat 17172894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 44806615 - 44806578
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||||||||||||||||| |||||||| ||||||    
T  44806615 gttacaaatccgtgcttcgcactggttgaattacgtat 44806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 211
Target Start/End: Complemental strand, 15595462 - 15595430
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataa 211  Q
    |||||||| ||||||||||||||||||||||||    
T  15595462 gttacaaacccgtgcttcgcacgggttgaataa 15595430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 19049240 - 19049280
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||| ||||||||||||||||||||||    
T  19049240 aactagttacaaacccgtacttcgcacgggttgaataacgt 19049280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 42996983 - 42996939
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||| ||||||||||| |||||    
T  42996983 aactagttacaaacccgtgcttcgcacaggttgaataacatatct 42996939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 47573332 - 47573372
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  47573332 aactagttacaaacccgtgcttcgcacgggttcaataacgt 47573372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 24918 - 24962
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  24918 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 24962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 13065 - 13021
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  13065 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 13021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 17394 - 17442
Alignment:
Q  168 ttaagcaactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||| |||||||| |||||||||||||||||||||||||||||    
T  17394 ttaagtaactagttacaaacccgtgcttcgcacgggttgaataacgtat 17442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 7364822 - 7364778
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  7364822 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 7364778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 4289026 - 4289069
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  4289026 caactagttacaaacccgtgcttcgcacgggttgaataacgtat 4289069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 5253337 - 5253295
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  5253337 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 5253295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 9542629 - 9542667
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  9542629 aactagttacaaacccgtgcttcgcacgggttgaataac 9542667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 26828502 - 26828460
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  26828502 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 26828460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 28609995 - 28609953
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  28609995 aactagttacaaacccgtgctttgcacgggttgaataacgtat 28609953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 33908234 - 33908192
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  33908234 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 33908192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 42782716 - 42782674
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| ||||||||| |||||||||||||||||||    
T  42782716 aactagttacaaacccgtgcttcacacgggttgaataacgtat 42782674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 9916711 - 9916748
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  9916711 gttacaaacccgtgcttcgcacaggttgaataacgtat 9916748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 11707611 - 11707574
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  11707611 gttacaaacccgtgcttcgcacgggttcaataacgtat 11707574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 16884289 - 16884248
Alignment:
Q  175 actggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||||||||||   |||||||||||||||||||||||||||    
T  16884289 actggttacaaacaagtgcttcgcacgggttgaataacgtat 16884248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 175 - 216
Target Start/End: Complemental strand, 17041979 - 17041938
Alignment:
Q  175 actggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||||||||||   |||||||||||||||||||||||||||    
T  17041979 actggttacaaacaagtgcttcgcacgggttgaataacgtat 17041938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 19488313 - 19488276
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| ||||| |||||||||||||||||||||||    
T  19488313 gttacaaacccgtgtttcgcacgggttgaataacgtat 19488276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 45003666 - 45003703
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||||||| ||||||    
T  45003666 gttacaaacccgtgcttcgcacgggttgaattacgtat 45003703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 6342728 - 6342768
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  6342728 aactagttacaaacccgtgcttcgcacgggtttaataacgt 6342768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 179 - 215
Target Start/End: Original strand, 10820977 - 10821013
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgta 215  Q
    |||||||||  ||||||||||||||||||||||||||    
T  10820977 gttacaaatttgtgcttcgcacgggttgaataacgta 10821013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 30922097 - 30922141
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||| |||||||||||| ||||||||    
T  30922097 aactagttacaaacccgtgcttcacacgggttgaattacgtatct 30922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 3929747 - 3929791
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  3929747 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 3929791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 28565429 - 28565473
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||||||||||||||||||||||||||    
T  28565429 aactagttacaaacccgtgcttcgcacgggttgaataacgtatct 28565473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 29840688 - 29840731
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  29840688 caactagttacaaacccgtgcttcgcacgggttgaataacgtat 29840731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 216
Target Start/End: Complemental strand, 38896858 - 38896815
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||||||||||||||||||||||||    
T  38896858 caactagttacaaacccgtgcttcgcacgggttgaataacgtat 38896815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 4894010 - 4893968
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  4894010 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 4893968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 10763630 - 10763588
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  10763630 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 10763588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 42682634 - 42682592
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  42682634 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 42682592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 174 - 215
Target Start/End: Complemental strand, 47137901 - 47137860
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgta 215  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  47137901 aactagttacaaacccgtgcttcgcacgggttgaataacgta 47137860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 20767598 - 20767554
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||| |||||||||||||||    
T  20767598 aactagttacaaacccgtgcttcgcacggcttgaataacgtatct 20767554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 28573204 - 28573160
Alignment:
Q  172 gcaactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||| |||||||| |||||||| ||||||||||||||||||||    
T  28573204 gcaactagttacaaacccgtgctttgcacgggttgaataacgtat 28573160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Complemental strand, 28631853 - 28631809
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  28631853 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 28631809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 13662123 - 13662162
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  13662123 gttacaaacccgtgcttcgcacgggttgaataacatatct 13662162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 33074230 - 33074273
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| |||||||| ||||||||||||||||||||    
T  33074230 caactagttacaaacccgtgctttgcacgggttgaataacgtat 33074273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 1376024 - 1375982
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  1376024 aactagttacaaacccgtgctttgcacgggttgaataacgtat 1375982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 19320420 - 19320462
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  19320420 aactagttacaaacccgtgctttgcacgggttgaataacgtat 19320462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 22194467 - 22194509
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  22194467 aactagttacaaacccgtgctttgcacgggttgaataacgtat 22194509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 24289200 - 24289242
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  24289200 aactagttacaaacccgtgctttgcacgggttgaataacgtat 24289242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 29184477 - 29184519
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| ||||||||||||||| |||||||||||||    
T  29184477 aactagttacaaacccgtgcttcgcacggattgaataacgtat 29184519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 29693430 - 29693388
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||| ||||||    
T  29693430 aactagttacaaacccgtgcttcgcacgggttgaattacgtat 29693388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 44407336 - 44407294
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  44407336 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 44407294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 24294906 - 24294869
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  24294906 gttacaaacccgtgcttcgcacgggttcaataacgtat 24294869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 31620636 - 31620599
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  31620636 gttacaaacccgtgcttcgcacgggttcaataacgtat 31620599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 33363609 - 33363572
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| ||||||||||||||| |||||||||||||    
T  33363609 gttacaaacccgtgcttcgcacggattgaataacgtat 33363572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 46623370 - 46623418
Alignment:
Q  168 ttaagcaactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| ||||| |||||||  |||||||||||||| ||||||||||||||    
T  46623370 ttaaacaactagttacaatcccgtgcttcgcacgagttgaataacgtat 46623418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 50394966 - 50395006
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||| ||||||||    
T  50394966 aactagttacaaacccgtgcttcgcacgggttcaataacgt 50395006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000004; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 188773 - 188734
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  188773 gttacaaacccgtgcttcgcacgggttgaataacgtatct 188734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 52462213 - 52462256
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||    
T  52462213 caactagttacaaatccgtgcttcgcacgggttcaataacgtat 52462256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 4137399 - 4137441
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  4137399 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 4137441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 8396808 - 8396766
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  8396808 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 8396766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 178 - 216
Target Start/End: Complemental strand, 17228625 - 17228587
Alignment:
Q  178 ggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  17228625 ggttacaaatccgtgtttcgcacgggttgaataacgtat 17228587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 18688716 - 18688674
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  18688716 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 18688674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 22477948 - 22477906
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  22477948 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 22477906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 35861044 - 35861002
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  35861044 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 35861002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 5241030 - 5240990
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  5241030 aactagttacaaacccgtgcttcgcacgggttgaataacgt 5240990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 216
Target Start/End: Original strand, 12001433 - 12001468
Alignment:
Q  181 tacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||| |||||||||||||||||||||||||||||    
T  12001433 tacaaacccgtgcttcgcacgggttgaataacgtat 12001468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 16496414 - 16496375
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  16496414 gttacaaacccgtgcttcgcacgggttgaataacatatct 16496375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 30766543 - 30766504
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| | |||||||||||||||||||||||||||||    
T  30766543 gttacaaacctgtgcttcgcacgggttgaataacgtatct 30766504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 11950990 - 11951032
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| || ||||||||||||||||||||||||||    
T  11950990 aactagttacaaacccatgcttcgcacgggttgaataacgtat 11951032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 19353837 - 19353795
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||||| |||||||||||||||| ||||||||||    
T  19353837 aactagttacaaatctgtgcttcgcacgggttcaataacgtat 19353795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 21165930 - 21165968
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  21165930 aactagttacaaacccgtgcttcgcacgggttgaataac 21165968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 26100777 - 26100819
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||| ||||    
T  26100777 aactagttacaaacccgtgcttcgcacgggttgaataatgtat 26100819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 26776433 - 26776471
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  26776433 aactagttacaaacccgtgcttcgcacgggttgaataac 26776471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 50742338 - 50742296
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  50742338 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 50742296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 15315272 - 15315317
Alignment:
Q  174 aactggttacaaatccgtgctt-cgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||||| |||||||||||||||||||||||    
T  15315272 aactagttacaaacccgtgctttcgcacgggttgaataacgtatct 15315317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 22522308 - 22522275
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||||||| |||||||||||||||||||||||||    
T  22522308 gttacaaacccgtgcttcgcacgggttgaataac 22522275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 39576571 - 39576534
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  39576571 gttacaaacccgtgcttcgcacgagttgaataacgtat 39576534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 26035813 - 26035857
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| |||||| ||||||||||||||||| ||||||    
T  26035813 aactagttacaaacccgtgcgtcgcacgggttgaataatgtatct 26035857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 14690 - 14648
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  14690 aactagttacaaacccgtgcttcgcacgggttgaataacgtat 14648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 52692 - 52736
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||    
T  52692 aactagttacaaacccgtgcttcgcacgggttgaataacatatct 52736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 32; Significance: 0.000000009; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Complemental strand, 61750 - 61711
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  61750 gttacaaacccgtgcttcgcacgggttgaatatcgtatct 61711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 55602 - 55560
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||| ||||||||||||||    
T  55602 aactagttacaaacccgtgcttcgcacgagttgaataacgtat 55560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 173 - 216
Target Start/End: Original strand, 143212 - 143255
Alignment:
Q  173 caactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||    
T  143212 caactagttacaaacccgtgcttcgcacaggttgaataacgtat 143255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 179 - 218
Target Start/End: Original strand, 151885 - 151924
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtatct 218  Q
    |||||||| ||||||||||||||||||||||||| |||||    
T  151885 gttacaaacccgtgcttcgcacgggttgaataacatatct 151924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0484 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0484
Description:

Target: scaffold0484; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 212
Target Start/End: Original strand, 8175 - 8213
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataac 212  Q
    |||| |||||||| |||||||||||||||||||||||||    
T  8175 aactagttacaaacccgtgcttcgcacgggttgaataac 8213  T

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Target: scaffold0381 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Complemental strand, 11274 - 11232
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||| ||||||||||||||||||||    
T  11274 aactagttacaaacccgtgctttgcacgggttgaataacgtat 11232  T

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Target: scaffold0171 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 174 - 216
Target Start/End: Original strand, 29638 - 29680
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||| |||||||| |||||||||||||||||| ||||||||||    
T  29638 aactagttacaaacccgtgcttcgcacgggttcaataacgtat 29680  T

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Target: scaffold0047 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Original strand, 25618 - 25655
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  25618 gttacaaacccgtgcttcgcacgggttcaataacgtat 25655  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 216
Target Start/End: Complemental strand, 10902 - 10865
Alignment:
Q  179 gttacaaatccgtgcttcgcacgggttgaataacgtat 216  Q
    |||||||| |||||||||||||||||| ||||||||||    
T  10902 gttacaaacccgtgcttcgcacgggttcaataacgtat 10865  T

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Target: scaffold0175 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 214
Target Start/End: Original strand, 26963 - 27003
Alignment:
Q  174 aactggttacaaatccgtgcttcgcacgggttgaataacgt 214  Q
    ||||||||| ||| |||||||||||| ||||||||||||||    
T  26963 aactggttaaaaacccgtgcttcgcatgggttgaataacgt 27003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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