View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3602_low_3 (Length: 294)
Name: NF3602_low_3
Description: NF3602
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3602_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 42158851 - 42158598
Alignment:
| Q |
21 |
acggaccatatatactttggttcgtcaaaccacatagatttcttagaaattagtggtctgacttactgcgacaggtggtttgtcaaaccatggttggttg |
120 |
Q |
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| T |
42158851 |
acggaccatatatactgtggttcgtcaaaccacatagatttcttagaaattagtggtctgacttactacgataggtggtttgtcaaaccatggttggttg |
42158752 |
T |
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| Q |
121 |
ttgctcaatgtccaacggctaattactgtttggatggacaaaccaaaagagagaatccacgttgataatctattatcatagcaacatcattcatgaatca |
220 |
Q |
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| T |
42158751 |
ttggtcaatgtccaacggctaattactgtttggatggacaaaccaaaagagagaatccacgttgataatctattatcatagcaacatcattcatgaatca |
42158652 |
T |
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| Q |
221 |
tgataatcattgcttgaaaaagttgaaataacatataaacttagagacagaaaa |
274 |
Q |
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| T |
42158651 |
tgataatcattgcttgaaaaagttgaaataacatataaacttagagacagaaaa |
42158598 |
T |
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