View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF3603_low_1 (Length: 262)
Name: NF3603_low_1
Description: NF3603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF3603_low_1 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 20950077 - 20949841
Alignment:
| Q |
6 |
agtgagatgaactaatttaactaagctaagaaaatatacagcagataaagcaagtagtaagcttctttatatataactccctcttcctttcaacatgatg |
105 |
Q |
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| T |
20950077 |
agtgaaatgaactaatttaactaagctaagaaaatatacagcagataaagcaagtagtaagcttctttatatataactccctcttcctttcaacatgatg |
20949978 |
T |
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| Q |
106 |
tgaatgaccgatatgggacatacaaaataccttctgttaataatatttgataatatgttttcattatcactaatcacgtccatgttctaattcaattaaa |
205 |
Q |
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| T |
20949977 |
tgaatgaccgatatgggacatacaaaataccttctgttaataatatttgataatatgttttcattatc-ctaatcacgtccatgttctaattcaattaaa |
20949879 |
T |
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| Q |
206 |
actataccacaaacctgtaaggttccgactatgcatac |
243 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
20949878 |
actataccacaaacctgtaaggttccgactatgcatac |
20949841 |
T |
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